Metagenome / Metatranscriptome Family F075353

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075353
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	71 residues
Representative Sequence	MSNVPAVSMEDLELEHAELLPSRETLWCCHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL
Number of Associated Samples	101
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.59 %
% of genes near scaffold ends (potentially truncated)	21.01 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.269 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.966 % of family members)
Environment Ontology (ENVO)	Unclassified (33.613 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.00% β-sheet: 2.00% Coil/Unstructured: 95.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF01476	LysM	5.88
PF13560	HTH_31	3.36
PF01061	ABC2_membrane	0.84
PF01381	HTH_3	0.84
PF00484	Pro_CA	0.84
PF13443	HTH_26	0.84
PF05746	DALR_1	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.84
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.84
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.27 %
Unclassified	root	N/A	27.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.27 %
Unclassified	root	N/A	27.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.27 %
Unclassified	root	N/A	27.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	68.91 %
Unclassified	root	N/A	27.73 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.84 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	68.91 %
Unclassified	root	N/A	27.73 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	63.03 %
Unclassified	root	N/A	27.73 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	54.62 %
Unclassified	root	N/A	27.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.52 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	54.62 %
Unclassified	root	N/A	27.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	54.62 %
Unclassified	root	N/A	27.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.84 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	54.62 %
Unclassified	root	N/A	27.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.52 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001384\|JGI20190J14840_1003213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1936	Open in IMG/M
3300001418\|JGI20188J14859_1005222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1745	Open in IMG/M
3300001449\|JGI20208J14878_1034356	Not Available	512	Open in IMG/M
3300001452\|JGI20203J14952_1029308	Not Available	596	Open in IMG/M
3300001471\|JGI12712J15308_10119092	Not Available	673	Open in IMG/M
3300004092\|Ga0062389_102456260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	690	Open in IMG/M
3300004152\|Ga0062386_100045007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3313	Open in IMG/M
3300004479\|Ga0062595_100824284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	768	Open in IMG/M
3300005186\|Ga0066676_10961369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	570	Open in IMG/M
3300005332\|Ga0066388_100074751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3719	Open in IMG/M
3300005332\|Ga0066388_100413312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1993	Open in IMG/M
3300005332\|Ga0066388_103074762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	853	Open in IMG/M
3300005337\|Ga0070682_101773531	Not Available	538	Open in IMG/M
3300005363\|Ga0008090_15608470	Not Available	607	Open in IMG/M
3300005434\|Ga0070709_10060077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2415	Open in IMG/M
3300005434\|Ga0070709_10693748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300005456\|Ga0070678_100577455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1001	Open in IMG/M
3300005545\|Ga0070695_100793635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	758	Open in IMG/M
3300005547\|Ga0070693_100391041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	962	Open in IMG/M
3300005602\|Ga0070762_10171189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1313	Open in IMG/M
3300005712\|Ga0070764_10774554	Not Available	595	Open in IMG/M
3300005764\|Ga0066903_102635740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	975	Open in IMG/M
3300005764\|Ga0066903_102821369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	943	Open in IMG/M
3300005764\|Ga0066903_102940818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	923	Open in IMG/M
3300006163\|Ga0070715_11098898	Not Available	501	Open in IMG/M
3300006806\|Ga0079220_10082004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1622	Open in IMG/M
3300006806\|Ga0079220_10190183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1174	Open in IMG/M
3300006854\|Ga0075425_103092584	Not Available	507	Open in IMG/M
3300006954\|Ga0079219_10449776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	878	Open in IMG/M
3300007255\|Ga0099791_10604867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	536	Open in IMG/M
3300009012\|Ga0066710_100817529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1429	Open in IMG/M
3300009101\|Ga0105247_11310151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	582	Open in IMG/M
3300009174\|Ga0105241_12192696	Not Available	548	Open in IMG/M
3300009177\|Ga0105248_11837518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	687	Open in IMG/M
3300009400\|Ga0116854_1004362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1052	Open in IMG/M
3300009522\|Ga0116218_1185982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	940	Open in IMG/M
3300009545\|Ga0105237_11027353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	831	Open in IMG/M
3300010043\|Ga0126380_11451254	Not Available	605	Open in IMG/M
3300010043\|Ga0126380_12182199	Not Available	511	Open in IMG/M
3300010046\|Ga0126384_10523286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1026	Open in IMG/M
3300010047\|Ga0126382_11323696	Not Available	653	Open in IMG/M
3300010048\|Ga0126373_10469459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1296	Open in IMG/M
3300010048\|Ga0126373_11240249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	812	Open in IMG/M
3300010048\|Ga0126373_11733450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	689	Open in IMG/M
3300010147\|Ga0126319_1466194	Not Available	553	Open in IMG/M
3300010359\|Ga0126376_10157552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1828	Open in IMG/M
3300010359\|Ga0126376_10734859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	955	Open in IMG/M
3300010361\|Ga0126378_10474196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1366	Open in IMG/M
3300010362\|Ga0126377_10463158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1292	Open in IMG/M
3300010376\|Ga0126381_102989259	Not Available	672	Open in IMG/M
3300010376\|Ga0126381_104390334	Not Available	545	Open in IMG/M
3300010401\|Ga0134121_10048084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3494	Open in IMG/M
3300010858\|Ga0126345_1040774	Not Available	592	Open in IMG/M
3300010866\|Ga0126344_1101547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	735	Open in IMG/M
3300010876\|Ga0126361_10140421	Not Available	514	Open in IMG/M
3300010880\|Ga0126350_10348611	Not Available	556	Open in IMG/M
3300012199\|Ga0137383_10195773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1481	Open in IMG/M
3300012200\|Ga0137382_10120322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1754	Open in IMG/M
3300012201\|Ga0137365_10023434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4781	Open in IMG/M
3300012206\|Ga0137380_10193920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1844	Open in IMG/M
3300012209\|Ga0137379_10527550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1088	Open in IMG/M
3300012285\|Ga0137370_10794490	Not Available	587	Open in IMG/M
3300012356\|Ga0137371_10465845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	977	Open in IMG/M
3300012357\|Ga0137384_10142635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2005	Open in IMG/M
3300012363\|Ga0137390_10107437	All Organisms → cellular organisms → Bacteria	2760	Open in IMG/M
3300012924\|Ga0137413_11622920	Not Available	529	Open in IMG/M
3300012930\|Ga0137407_10150277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2057	Open in IMG/M
3300012948\|Ga0126375_10038413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2450	Open in IMG/M
3300012971\|Ga0126369_11024452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	913	Open in IMG/M
3300012989\|Ga0164305_11428630	Not Available	610	Open in IMG/M
3300014325\|Ga0163163_11792021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	674	Open in IMG/M
3300014501\|Ga0182024_10007779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22998	Open in IMG/M
3300014501\|Ga0182024_12484138	Not Available	559	Open in IMG/M
3300014829\|Ga0120104_1019568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1208	Open in IMG/M
3300015089\|Ga0167643_1037346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	750	Open in IMG/M
3300017926\|Ga0187807_1018891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2122	Open in IMG/M
3300017942\|Ga0187808_10345659	Not Available	674	Open in IMG/M
3300017947\|Ga0187785_10386508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	669	Open in IMG/M
3300017970\|Ga0187783_11006781	Not Available	600	Open in IMG/M
3300018007\|Ga0187805_10498745	Not Available	570	Open in IMG/M
3300019887\|Ga0193729_1080535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1271	Open in IMG/M
3300019890\|Ga0193728_1152077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1017	Open in IMG/M
3300020070\|Ga0206356_11047129	Not Available	545	Open in IMG/M
3300020582\|Ga0210395_10877878	Not Available	667	Open in IMG/M
3300021286\|Ga0179583_1107579	Not Available	614	Open in IMG/M
3300021560\|Ga0126371_10086047	All Organisms → cellular organisms → Bacteria	3096	Open in IMG/M
3300021560\|Ga0126371_11099604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	934	Open in IMG/M
3300021560\|Ga0126371_11842033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	726	Open in IMG/M
3300021560\|Ga0126371_12375438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	641	Open in IMG/M
3300022467\|Ga0224712_10356323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	692	Open in IMG/M
3300025504\|Ga0208356_1018712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1507	Open in IMG/M
3300025574\|Ga0208717_1010747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2673	Open in IMG/M
3300025574\|Ga0208717_1088818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	692	Open in IMG/M
3300025703\|Ga0208357_1076988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1027	Open in IMG/M
3300025898\|Ga0207692_10070089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1844	Open in IMG/M
3300025914\|Ga0207671_11475760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	526	Open in IMG/M
3300025915\|Ga0207693_10173777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1696	Open in IMG/M
3300025928\|Ga0207700_11249960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	662	Open in IMG/M
3300025929\|Ga0207664_11418398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	615	Open in IMG/M
3300026088\|Ga0207641_12635947	Not Available	500	Open in IMG/M
3300027496\|Ga0208987_1048019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	765	Open in IMG/M
3300027505\|Ga0209218_1019719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1254	Open in IMG/M
3300027696\|Ga0208696_1062153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1285	Open in IMG/M
3300027775\|Ga0209177_10111385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	882	Open in IMG/M
3300027874\|Ga0209465_10281195	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	833	Open in IMG/M
3300027879\|Ga0209169_10280264	Not Available	875	Open in IMG/M
3300027889\|Ga0209380_10266579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1006	Open in IMG/M
3300030730\|Ga0307482_1215233	Not Available	590	Open in IMG/M
3300030815\|Ga0265746_1007593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300031771\|Ga0318546_11036770	Not Available	577	Open in IMG/M
3300032515\|Ga0348332_12389279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	582	Open in IMG/M
3300032515\|Ga0348332_13527951	Not Available	542	Open in IMG/M
3300032828\|Ga0335080_10538669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1235	Open in IMG/M
3300032892\|Ga0335081_10598968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1360	Open in IMG/M
3300032895\|Ga0335074_10018127	All Organisms → cellular organisms → Bacteria	9931	Open in IMG/M
3300032896\|Ga0335075_10004240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22481	Open in IMG/M
3300032896\|Ga0335075_10119112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3392	Open in IMG/M
3300032898\|Ga0335072_10118023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3343	Open in IMG/M
3300033134\|Ga0335073_11189590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	766	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.44%
Host-Associated	Host-Associated	7.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.39%
Plants	Host-Associated → Plants	7.56%
Aquatic	Environmental → Aquatic	5.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.71%
Freshwater	Environmental → Aquatic → Freshwater	5.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.68%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.30%
Loam	Environmental → Terrestrial → Soil → Loam	20.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.20%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.68%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.68%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.84%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.92%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.36%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.36%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.52%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.68%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.68%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.84%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental	Open in IMG/M
3300001449	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow	Environmental	Open in IMG/M
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009400	Soil microbial community of the Robinson Ridge, Antarctica. Combined Assembly of Gp0139162, Gp0138857, Gp0138858	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015089	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8A, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20190J14840_10032132	3300001384	Arctic Peat Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL*
JGI20188J14859_10052222	3300001418	Arctic Peat Soil	MSNVPAVSMEDLELEHAELLPSRETLWVCHHPSQYGSSFSFTQVAQGNGNTNQAGFLNISALNGNLSGNTLVL*
JGI20208J14878_10343561	3300001449	Arctic Peat Soil	MSNVPAVSMEELELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL*
JGI20203J14952_10293081	3300001452	Arctic Peat Soil	MSNVPAVSMEXLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL*
JGI12712J15308_101190922	3300001471	Forest Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLIQISALNGNLSGNTLVL*
Ga0062389_1024562601	3300004092	Bog Forest Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLIQISALNGNLSGNT
Ga0062386_1000450073	3300004152	Bog Forest Soil	MSTVPAMTMQELELESAELLPSRETLTCYSCRPCCGGYSFSQSNWGIGNTNQVGLLNISALNGNFSGNSF*
Ga0062595_1008242841	3300004479	Soil	PAVTMQELELETAELLPSRETLWVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0066676_109613691	3300005186	Soil	MSTLPAVTMQDLELEHAELLPSRETLNCCRHQGSGFSFSQVAVGQGNTNQAGGLVQISALNGNFSGNNIEL*
Ga0066388_1000747514	3300005332	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNVCHRHPSGTSSSFSFTQVAAGQGNTNQAGIGNISALNGNNVLVVL*
Ga0066388_1004133122	3300005332	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRNHGGFSFSQVAVGQGNTNQFGLVNVSALNGNLSGNTLVL*
Ga0066388_1030747622	3300005332	Tropical Forest Soil	MSTLPAVTMQDLELEHAELLPSRETLWSCHPQHASSSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVIG*
Ga0070682_1017735311	3300005337	Corn Rhizosphere	MSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0008090_156084701	3300005363	Tropical Rainforest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRHHGGGSSFSQLAVGQGNTNQAGGFIQVSALNGNFSGNNIEL*
Ga0070709_100600773	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNLSALNGNLSGNEIVIL*
Ga0070709_106937482	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVTMQDLELETAELLPSRETLNCCGSRHSGFSVTQLNASQNGNTAQFGLVNISALNGNLSGNNVIL*
Ga0070678_1005774552	3300005456	Miscanthus Rhizosphere	MSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0070695_1007936352	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSG
Ga0070693_1003910412	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	ETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0070762_101711893	3300005602	Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLLQISALNGNLSGNTLVL*
Ga0070764_107745541	3300005712	Soil	MSTAITMQDLELEHAELLPSRETLCCVHYRPTCGGGGVDFTQVAAGQGNTNQIGLLNISALNGNLSGNQIGLL*
Ga0066903_1026357402	3300005764	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRNHGGFSFSQVAVGQGNTNQVGLVNISALNGNLSGNTLVL*
Ga0066903_1028213692	3300005764	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRHGGGGFSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVL*
Ga0066903_1029408181	3300005764	Tropical Forest Soil	MSTLPAVTMKDLELEHAELLPSRETLWSCHPQHASSSFSQVAVGQGNTNQVGLLNISALNGNFSGNTLVIG*
Ga0070715_110988981	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSTLPAVTMQDLELEHAELLPSRETLNCCRHHGSGGFSFTQVAAGQGNTNQAGIGNISALNGNNVLVVL*
Ga0079220_100820042	3300006806	Agricultural Soil	MSTLPAVTMQDLELEHAELLPSRETLNCCRHHGGGGFSFTQVAAGQGNTNQAGGLVQISALNGNFSGNSIDL*
Ga0079220_101901831	3300006806	Agricultural Soil	VSTVPAVTRQELELETAELLPSRETLWVCHSSPHSTTNNIFSQVAAGNGNTNQAGFLNLSALNGN
Ga0075425_1030925841	3300006854	Populus Rhizosphere	QELELETAELLPSRETLWVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0079219_104497762	3300006954	Agricultural Soil	VSTVPAVTRQELELETAELLPSRETLWVCHSSPHSTTNNIFSQVAAGNGNTNQAGFLNLSALNGNLSGNEIVIR*
Ga0099791_106048672	3300007255	Vadose Zone Soil	MFTLPAVTMQDLELEHAELLPSRETLNCCRHQGSGFSFSQVAVGQGNTNQAGGLVQISALNGNFSGNNIEL*
Ga0066710_1008175293	3300009012	Grasslands Soil	MSTLPAVTMQDLELEHAELLPSRETLNCCRHQGSGFSFSQVAVGQGNTNQAGGLVQISALNGNFSGNNIEL
Ga0105247_113101512	3300009101	Switchgrass Rhizosphere	GSMSTVPAVTMQELELETAELLPSRETLRVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0105241_121926961	3300009174	Corn Rhizosphere	MQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0105248_118375182	3300009177	Switchgrass Rhizosphere	VPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNLSALNGNLSGNEIVIL*
Ga0116854_10043622	3300009400	Soil	MEDLELEHAELLPSRETLWVCHHPSQYGSNFSFTQVAXNTNQAGFLNISALNGNLSGNSISL*
Ga0116218_11859822	3300009522	Peatlands Soil	MSTAVTMQDLELEHAELLPSRETLCSCYRFHPSSSFSQVAVGQGNTNQVGLLNISALNGNLSGNEIVL*
Ga0105237_110273531	3300009545	Corn Rhizosphere	MQELELETAELLPSRETLWVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0126380_114512541	3300010043	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRNHGGFSFSQVAVGQGNTNQFGLVNISALNGNLSGNTLVL*
Ga0126380_121821991	3300010043	Tropical Forest Soil	MSTAVTMQDLELETAELLPSRETLNCCHNRSSGFSFSQVNASENGNTIQNGLINVSALNGNFSGNNVAFL*
Ga0126384_105232862	3300010046	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRHHGGGSFSFSQVAVGQGNTNQVGLVNISALNGNLSGNTLVL*
Ga0126382_113236961	3300010047	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRNHGGGFSFSQVAVGQGNTNQVGLVNISALNGNLSGNTLVL*
Ga0126373_104694592	3300010048	Tropical Forest Soil	MQDLELEHAELLPSRETLWSCHPQHASSSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVIG*
Ga0126373_112402491	3300010048	Tropical Forest Soil	MQDLELEHAELLPSRETLWCCSSRHAGSSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLIL*
Ga0126373_117334501	3300010048	Tropical Forest Soil	MQDLEFEHAELLPSRETLWCCSSRHAGSSFSQLAVGQGNTNQVGLLNISALNGNLSGNTLIL*
Ga0126319_14661941	3300010147	Soil	MSTLPAVTMQDLELEQAELLPSRETLNCCRHQGSGFSFSQVAVGQGNTNQAGGLIQISALNGNFSGNNIEL*
Ga0126376_101575521	3300010359	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNVCHRHPSGTSSSFSFTQVAAGQGNTNQAGIGNISALNGNNVLVVL
Ga0126376_107348591	3300010359	Tropical Forest Soil	MSTLPAVTMQDLELEHAELLPSRETLNVCHRHPSGSSSSFSFTQVAAGQGNTNQAGIGNISALNGNNVLVVL*
Ga0126378_104741962	3300010361	Tropical Forest Soil	MQDLELEHAELLPSRETLNCCRHHGGGGFSFSQVAVGQGNTNQAGGLIQISALNGNLSGNTIL*
Ga0126377_104631582	3300010362	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRNHGGGFSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVL*
Ga0126381_1029892592	3300010376	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRHNGGFSFSQVAVGQGNTNQAGGFVQISALNGNFSGNNIEL*
Ga0126381_1043903341	3300010376	Tropical Forest Soil	MSTLPAVTMQDLELERAELLPGRETLWCCHSKHFGSSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVIG*
Ga0134121_100480844	3300010401	Terrestrial Soil	MQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNLSALNGNLSGNEIVIL*
Ga0126345_10407741	3300010858	Boreal Forest Soil	MEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL*
Ga0126344_11015471	3300010866	Boreal Forest Soil	MEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLIQISALNGNLSGNTLVL*
Ga0126361_101404212	3300010876	Boreal Forest Soil	MQELELESAELLPSRETLNCVHTSPHPSNSFSQSNWGIGNTNQAGGGLLGNISALNGNLSGNTIVLW*
Ga0126350_103486111	3300010880	Boreal Forest Soil	TAEGGNMSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLIQISALNGNLSGNTLVL*
Ga0137383_101957732	3300012199	Vadose Zone Soil	MSTLPAVTMQDLELEHAELLPSRETLNCCRHQGSGFSFSQVAVGQGNTNQAGGLVQVSALNGNFSGNNIEL*
Ga0137382_101203222	3300012200	Vadose Zone Soil	MQDLELEHAELLPSRETLNCCRHQGSGFSFSQVAVGQGNTNQAGGLVQVSALNGNFSGNNIEL*
Ga0137365_100234344	3300012201	Vadose Zone Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRQHGGGFSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVL*
Ga0137380_101939203	3300012206	Vadose Zone Soil	MSTAVTMQDLELEQAELLPSRETLNSCHSRSAGFSFTQVNASQNGNTFQSGLINVSALNGNLSGNNVAIL*
Ga0137379_105275501	3300012209	Vadose Zone Soil	MEELELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLIL*
Ga0137370_107944901	3300012285	Vadose Zone Soil	MSNAVTMQDLELEQAELLPSRETLNSCHSRSSGFSFTQVNASQNGNTVQNGLLNISALNGNFSGNNIAL*
Ga0137371_104658452	3300012356	Vadose Zone Soil	TMRDLELEHAELLPSRETLNCCRHQGSGFSFSQVAVGQGNTNQAGGLVQISALNGNFSGNNIEL*
Ga0137384_101426352	3300012357	Vadose Zone Soil	GGIMSTAVTMQDLELEQAELLPSRETLNSCHSRSAGFSFTQVNASQNGNTFQSGLINVSALNGNLSGNNVAIL*
Ga0137390_101074371	3300012363	Vadose Zone Soil	MSNVPAVTMEDLELEHAELLPSRETLWVCHPSHSGSSFTQVAQGNGNTNQAGFLNISVLNGNLSGNQIIL*
Ga0137413_116229202	3300012924	Vadose Zone Soil	MEELELEQAELLPSRETLWVCHHPSNYASSSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVIL*
Ga0137407_101502772	3300012930	Vadose Zone Soil	MQDLELEHAELLPSRETLNCCRHQGSGFSFSQVAVGQGNTNQAGGLVQISALNGNFSGNNIEL*
Ga0126375_100384132	3300012948	Tropical Forest Soil	MSTLPAVTMQDLELEHAELRLSRETLNCCRHGGGGFSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVL*
Ga0126369_110244522	3300012971	Tropical Forest Soil	MSTLPAVTTQDLELEQAELLPSRETLCCLRQHGGGFSLNQVAVGQGNTNQVGLVNISALNGNLSGNTLVL*
Ga0164305_114286301	3300012989	Soil	KGPTPVAAGAPICLERQVTPEGGSMSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNLSALNGNLSGNEIVIL*
Ga0163163_117920211	3300014325	Switchgrass Rhizosphere	PEGGSMSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL*
Ga0182024_100077799	3300014501	Permafrost	MSNVPAVSMEDLELEHAELLPSRETLWCVHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL*
Ga0182024_124841381	3300014501	Permafrost	MEDLELEHAELLPSRETLWVCHHPSQYGSSFSFTQVAQGNGNTNQAGFLNISALNGNLSGNTLVL*
Ga0120104_10195682	3300014829	Permafrost	MSNVPAVTMEDLELEHAELLPSRETLWTCHPYHSGSSFTQVAQGNGNTNQAGLLNISALNGNLSGNQIVLL*
Ga0167643_10373461	3300015089	Glacier Forefield Soil	MEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLLQISALNGNLSGNTLVL*
Ga0187807_10188913	3300017926	Freshwater Sediment	MSNLPAVTMQELELEQAELLPSRETLNCWCSHPSHGSSYSFTQVANGIGNTNQAGLINVSALNGDLSGNSLFVL
Ga0187808_103456592	3300017942	Freshwater Sediment	MSNLPAVTMQELELEQAELLPSRETLNCWCSHPSHGSSYSFTQVANGIGNTNQAGLINVSALNGDLSGDSLFVL
Ga0187785_103865082	3300017947	Tropical Peatland	MSTLPAVTMQDLELEQAEMLPSRETLCGCHPRHSGGGFSQVAVGQGNTNQVGLLNISALNGNFSGNEIYL
Ga0187783_110067812	3300017970	Tropical Peatland	LEHAELLPSRETLWPSCHSGHGFGFARVAYGIGNTNQVGLINVSALNGVLSGNTLVIG
Ga0187805_104987451	3300018007	Freshwater Sediment	MSTAPAVTMEDLELEHAELLPSRETLWSSCHSGHGFGFAQVAYGIGNTNQVGLINASALNGVLSGNTFAIG
Ga0193729_10805352	3300019887	Soil	MSTAVTMQDLELEQAELLPSRETLNCCHNRGSSFSFTQLNASQNGNTVQNGLLNISALNGNLSGNNIAL
Ga0193728_11520771	3300019890	Soil	MSNVPAVSMEDLELEHAELLPSRETLWVCSHPSQHGSSLSFTQVAQGNGNTNQAGFLNISALNGNLSGNTLVL
Ga0206356_110471291	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL
Ga0210395_108778782	3300020582	Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLLQISALNGNLSGNTLVL
Ga0179583_11075791	3300021286	Vadose Zone Soil	MSNVPAVSMEELELEQAELLPSRETLWVCHHPSNYASSSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVIL
Ga0126371_100860474	3300021560	Tropical Forest Soil	MSTLPAVTMKDLELEHAELLPSRETLWCCHSKHFGSSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVIG
Ga0126371_110996042	3300021560	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRHNGGFSFSQVAVGQGNTNQAGGFVQISALNGNFSGNNIEL
Ga0126371_118420332	3300021560	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLWCCRHQSGFSFSQVAVGQGNTNQAGGFVQISALNGNFSGNNIEL
Ga0126371_123754381	3300021560	Tropical Forest Soil	TLPAVTMKDLELEHAELLPSRETLWSCHPQHASSSFSQVAVGQGNTNQVGLLNISALNGNFSGNTLVIG
Ga0224712_103563231	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL
Ga0208356_10187122	3300025504	Arctic Peat Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL
Ga0208717_10107474	3300025574	Arctic Peat Soil	MSNVPAVSMEDLELEHAELLPSRETLWVCHHPSQYGSSFSFTQVAQGNGNTNQAGFLNISALNGNLSGNTLVL
Ga0208717_10888181	3300025574	Arctic Peat Soil	MSNVPAVSMEELELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL
Ga0208357_10769881	3300025703	Arctic Peat Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAQGNGNTNQAGFLNISALNGNLSGNTLVL
Ga0207692_100700891	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNLSALNGNLSGNEIVIL
Ga0207671_114757602	3300025914	Corn Rhizosphere	MQELELETAELLPSRETLWVCHSSPHSSTTNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL
Ga0207693_101737771	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSAVTMQDLELETAELLPSRETLNCCGSRHSGFSVTQLNASQNGNTAQFGLVNISALN
Ga0207700_112499601	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GSMSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNLSALNGNLSGNEIVIL
Ga0207664_114183981	3300025929	Agricultural Soil	SMSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL
Ga0207641_126359471	3300026088	Switchgrass Rhizosphere	PTPVAAGAPICLERQVTPEGGSMSTVPAVTMQELELETAELLPSRETLWVCHSSPHSSTTNNIFSQVAAGNGNTNQAGFLNVSALNGNLSGNEIVIL
Ga0208987_10480192	3300027496	Forest Soil	MSNVPAVSMEDLELEHAELLPSRETLWCVHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL
Ga0209218_10197192	3300027505	Forest Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLIQISALNGNLSGNTLVL
Ga0208696_10621531	3300027696	Peatlands Soil	MSTAVTMQDLELEHAELLPSRETLCSCYRFHPSSSFSQVAVGQGNTNQVGLLNISALNGNLSGNEIVL
Ga0209177_101113851	3300027775	Agricultural Soil	VSTVPAVTRQELELETAELLPSRETLWVCHSSPHSTTNNIFSQVAAGNGNTNQAGFLNLSALNGNLSGNEIVIR
Ga0209465_102811951	3300027874	Tropical Forest Soil	MSTLPAVTTQDLELEHAELLPSRETLNCCRHGGGGFSFSQVAVGQGNTNQVGLLNISALNGNLSGNTLVL
Ga0209169_102802641	3300027879	Soil	MSTAITMQDLELEHAELLPSRETLCCVHYRPTCGGGGVDFTQVAAGQGNTNQIGLLNISALNGNLSGNQIGLL
Ga0209380_102665791	3300027889	Soil	MSNVPAVSMEDLELEQAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGGLLQISALNGNLSGNT
Ga0307482_12152331	3300030730	Hardwood Forest Soil	MSNVPAVTMDDLELEHAELLPSRETLWVCRPCHGGPSSSFTQVAQGNGNTNQAGLLNLSALNGNLSGNTIQIL
Ga0265746_10075932	3300030815	Soil	MSNVPAVSMEDLELEHAELLPSRETLWCCHHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL
Ga0318546_110367702	3300031771	Soil	MSTLPAVTMQDLELEHAELLPSRETLNCCRHHGGGGFSFTQVAAGQGNTNQAGGFVQISALNGNLSGNS
Ga0348332_123892791	3300032515	Plant Litter	MSDVTMQELELETAELLPSRETLHCWHTHPAGGPSSSFTQVNNGIGNTNQAGLLNISALNGNLSGDNVFVL
Ga0348332_135279511	3300032515	Plant Litter	MSNVPAVSMEDLELEHAELLPSRETLWCCHPSNYGSSFSFTQVAAGNGNTNQAGFLNLSALNGNLSGNTLVL
Ga0335080_105386691	3300032828	Soil	MSTLPAVTMQELELEQAELLPSRETLNCCSYHPSHGTSYSFTQVANGIGNTNQAGFLNISALNGDLSGNNIVLW
Ga0335081_105989682	3300032892	Soil	MQDLELEQAELLPGRETLYCCTYHPSRSGFSFTQVANGIGNTNQAGLLNVSALNGNLSGNDIYLW
Ga0335074_100181278	3300032895	Soil	MSTAPAVTMEDLELERAELLPSRETLWSSCHSGHGFAQVAYGIGNTNQVGLINVSALNGVLSGNTLVIG
Ga0335075_100042404	3300032896	Soil	MSNAVTMQDLELEQAELLPSRETLNCCNYYRSSGFGFSQVAVGQGNTNQVGLLNISALNGNLSGNEIVL
Ga0335075_101191124	3300032896	Soil	MSTAPAVTMEDLELEHAELLPSRETLWASCHSGHGFGFAQVAYGIGNTNQVGLINVSALNGVLSGNTLVIG
Ga0335072_101180233	3300032898	Soil	MSTAPAVTMEDLELERAELLPSRETLWSSCHSGHGFGFAQVAYGIGNTNQVGLINVSALNGVLSGNTLVIG
Ga0335073_111895901	3300033134	Soil	MSTAPAVTMEDLELEHAELLPSRETLWSSCHSSHGFGFAQVAYGIGNTNQAGLVNVSALNGVLSGNTLVIG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075353

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences