Metagenome / Metatranscriptome Family F069266

Basic Information
Family ID	F069266
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	52 residues
Representative Sequence	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVR
Number of Associated Samples	113
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.19 %
% of genes near scaffold ends (potentially truncated)	98.39 %
% of genes from short scaffolds (< 2000 bps)	92.74 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Unclassified (55.645 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (27.419 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.903 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.67% β-sheet: 0.00% Coil/Unstructured: 65.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00691	OmpA	3.23
PF06262	Zincin_1	3.23
PF16542	PNKP_ligase	2.42
PF04978	DUF664	2.42
PF01381	HTH_3	1.61
PF12844	HTH_19	0.81
PF01979	Amidohydro_1	0.81
PF06964	Alpha-L-AF_C	0.81
PF13242	Hydrolase_like	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	3.23
COG3534	Alpha-L-arabinofuranosidase	Carbohydrate transport and metabolism [G]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
All Organisms	root	All Organisms	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
cellular organisms	root	All Organisms → cellular organisms	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	43.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.65 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.03 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.42 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.61 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.65 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4.03 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.42 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.61 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.65 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3.23 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.42 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.81 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|F0B48LX02G15KX	Not Available	538	Open in IMG/M
3300001452\|JGI20203J14952_1032072	Not Available	569	Open in IMG/M
3300003219\|JGI26341J46601_10010411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	3047	Open in IMG/M
3300005176\|Ga0066679_10895202	Not Available	559	Open in IMG/M
3300005332\|Ga0066388_104149421	Not Available	739	Open in IMG/M
3300005332\|Ga0066388_105593156	Not Available	636	Open in IMG/M
3300005363\|Ga0008090_13584677	Not Available	672	Open in IMG/M
3300005434\|Ga0070709_11188584	Not Available	612	Open in IMG/M
3300005436\|Ga0070713_101552232	Not Available	642	Open in IMG/M
3300005440\|Ga0070705_101469646	Not Available	570	Open in IMG/M
3300005535\|Ga0070684_100766406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	901	Open in IMG/M
3300005575\|Ga0066702_10897683	Not Available	529	Open in IMG/M
3300005841\|Ga0068863_100988238	Not Available	844	Open in IMG/M
3300005921\|Ga0070766_10086301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1835	Open in IMG/M
3300006059\|Ga0075017_101085131	Not Available	625	Open in IMG/M
3300006059\|Ga0075017_101441920	Not Available	542	Open in IMG/M
3300006173\|Ga0070716_100175930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1401	Open in IMG/M
3300006175\|Ga0070712_100641998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	901	Open in IMG/M
3300006176\|Ga0070765_100900094	Not Available	836	Open in IMG/M
3300006755\|Ga0079222_10767729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	779	Open in IMG/M
3300006797\|Ga0066659_10434203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1040	Open in IMG/M
3300006804\|Ga0079221_11200405	Not Available	589	Open in IMG/M
3300006806\|Ga0079220_10353690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	936	Open in IMG/M
3300006806\|Ga0079220_11898270	Not Available	528	Open in IMG/M
3300006904\|Ga0075424_100481032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1326	Open in IMG/M
3300009098\|Ga0105245_10257371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1698	Open in IMG/M
3300009098\|Ga0105245_12169040	Not Available	609	Open in IMG/M
3300009098\|Ga0105245_13171024	Not Available	510	Open in IMG/M
3300009698\|Ga0116216_10767261	Not Available	578	Open in IMG/M
3300009824\|Ga0116219_10233927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1046	Open in IMG/M
3300010361\|Ga0126378_10422856	Not Available	1446	Open in IMG/M
3300010361\|Ga0126378_12989913	Not Available	539	Open in IMG/M
3300010373\|Ga0134128_11237804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	823	Open in IMG/M
3300010376\|Ga0126381_102455636	Not Available	747	Open in IMG/M
3300010867\|Ga0126347_1445480	Not Available	510	Open in IMG/M
3300010876\|Ga0126361_10837947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1892	Open in IMG/M
3300010880\|Ga0126350_11756313	Not Available	725	Open in IMG/M
3300012208\|Ga0137376_10175293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1851	Open in IMG/M
3300012209\|Ga0137379_10603475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1004	Open in IMG/M
3300012351\|Ga0137386_10076593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2340	Open in IMG/M
3300013296\|Ga0157374_10460887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1273	Open in IMG/M
3300015373\|Ga0132257_101656265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M
3300016294\|Ga0182041_11543561	Not Available	612	Open in IMG/M
3300016341\|Ga0182035_10385413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1174	Open in IMG/M
3300016371\|Ga0182034_10222593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1472	Open in IMG/M
3300016387\|Ga0182040_11553239	Not Available	563	Open in IMG/M
3300017924\|Ga0187820_1046118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1170	Open in IMG/M
3300017942\|Ga0187808_10392690	Not Available	633	Open in IMG/M
3300017947\|Ga0187785_10674917	Not Available	540	Open in IMG/M
3300017959\|Ga0187779_10921792	Not Available	602	Open in IMG/M
3300017974\|Ga0187777_10512416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300018035\|Ga0187875_10175693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1189	Open in IMG/M
3300018046\|Ga0187851_10181208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1260	Open in IMG/M
3300019887\|Ga0193729_1161892	Not Available	798	Open in IMG/M
3300020583\|Ga0210401_11166170	Not Available	629	Open in IMG/M
3300021477\|Ga0210398_10881421	Not Available	718	Open in IMG/M
3300021478\|Ga0210402_11567874	Not Available	586	Open in IMG/M
3300021479\|Ga0210410_11076995	Not Available	694	Open in IMG/M
3300025475\|Ga0208478_1051925	Not Available	771	Open in IMG/M
3300025898\|Ga0207692_10352976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	907	Open in IMG/M
3300025906\|Ga0207699_10102955	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300025915\|Ga0207693_10512271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	936	Open in IMG/M
3300025916\|Ga0207663_11194456	Not Available	612	Open in IMG/M
3300025927\|Ga0207687_10236929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1444	Open in IMG/M
3300025929\|Ga0207664_10844859	Not Available	823	Open in IMG/M
3300026088\|Ga0207641_10567573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1108	Open in IMG/M
3300026116\|Ga0207674_11013560	Not Available	799	Open in IMG/M
3300027619\|Ga0209330_1088923	Not Available	703	Open in IMG/M
3300027725\|Ga0209178_1263815	Not Available	626	Open in IMG/M
3300027824\|Ga0209040_10043067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2770	Open in IMG/M
3300027846\|Ga0209180_10558098	Not Available	636	Open in IMG/M
3300027879\|Ga0209169_10171588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1132	Open in IMG/M
3300027895\|Ga0209624_11065589	Not Available	522	Open in IMG/M
3300028877\|Ga0302235_10185811	Not Available	919	Open in IMG/M
3300029943\|Ga0311340_10568600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300029994\|Ga0302283_1269653	Not Available	603	Open in IMG/M
3300030042\|Ga0302300_1098491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	879	Open in IMG/M
3300030580\|Ga0311355_11834894	Not Available	513	Open in IMG/M
3300030618\|Ga0311354_11170563	Not Available	697	Open in IMG/M
3300031028\|Ga0302180_10157805	Not Available	1252	Open in IMG/M
3300031525\|Ga0302326_10507891	Not Available	1824	Open in IMG/M
3300031543\|Ga0318516_10107132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1583	Open in IMG/M
3300031543\|Ga0318516_10628100	Not Available	612	Open in IMG/M
3300031544\|Ga0318534_10722998	Not Available	562	Open in IMG/M
3300031564\|Ga0318573_10020277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2986	Open in IMG/M
3300031679\|Ga0318561_10486386	Not Available	679	Open in IMG/M
3300031718\|Ga0307474_10163699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1683	Open in IMG/M
3300031724\|Ga0318500_10415411	Not Available	670	Open in IMG/M
3300031764\|Ga0318535_10068371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1515	Open in IMG/M
3300031771\|Ga0318546_10054577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2500	Open in IMG/M
3300031779\|Ga0318566_10317943	Not Available	770	Open in IMG/M
3300031823\|Ga0307478_11468831	Not Available	565	Open in IMG/M
3300031832\|Ga0318499_10024857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2118	Open in IMG/M
3300031880\|Ga0318544_10110045	Not Available	1043	Open in IMG/M
3300031890\|Ga0306925_10975720	Not Available	866	Open in IMG/M
3300031893\|Ga0318536_10026715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2672	Open in IMG/M
3300031894\|Ga0318522_10072122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1251	Open in IMG/M
3300031896\|Ga0318551_10216972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1062	Open in IMG/M
3300031896\|Ga0318551_10267809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300031897\|Ga0318520_10503120	Not Available	748	Open in IMG/M
3300031912\|Ga0306921_12544870	Not Available	530	Open in IMG/M
3300031939\|Ga0308174_10957761	Not Available	725	Open in IMG/M
3300031941\|Ga0310912_10405284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1062	Open in IMG/M
3300031959\|Ga0318530_10475236	Not Available	519	Open in IMG/M
3300032039\|Ga0318559_10303354	Not Available	741	Open in IMG/M
3300032041\|Ga0318549_10202070	Not Available	892	Open in IMG/M
3300032043\|Ga0318556_10071716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1715	Open in IMG/M
3300032043\|Ga0318556_10545578	Not Available	606	Open in IMG/M
3300032055\|Ga0318575_10038558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2137	Open in IMG/M
3300032065\|Ga0318513_10047782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1909	Open in IMG/M
3300032076\|Ga0306924_10798491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1052	Open in IMG/M
3300032089\|Ga0318525_10204750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M
3300032090\|Ga0318518_10140548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1223	Open in IMG/M
3300032091\|Ga0318577_10197242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300032770\|Ga0335085_11833499	Not Available	620	Open in IMG/M
3300032783\|Ga0335079_12265359	Not Available	517	Open in IMG/M
3300032805\|Ga0335078_10049448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6222	Open in IMG/M
3300032828\|Ga0335080_10410509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300032893\|Ga0335069_10499296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1411	Open in IMG/M
3300032896\|Ga0335075_11152942	Not Available	677	Open in IMG/M
3300032954\|Ga0335083_10411012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1154	Open in IMG/M
3300032954\|Ga0335083_11172491	Not Available	597	Open in IMG/M
3300033158\|Ga0335077_11899911	Not Available	556	Open in IMG/M
3300033158\|Ga0335077_12194075	Not Available	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.94%
Host-Associated	Host-Associated	8.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.48%
Plants	Host-Associated → Plants	8.06%
Aquatic	Environmental → Aquatic	6.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.03%
Peat	Environmental → Terrestrial → Peat	6.45%
Freshwater	Environmental → Aquatic → Freshwater	4.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.23%
Sediment	Environmental → Aquatic → Sediment	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.03%
Loam	Environmental → Terrestrial → Soil → Loam	14.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.26%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.29%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.42%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.61%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300001452	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029994	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_4	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_06071110	2170459002	Grass Soil	MAEPLDPAALGVASALKSLRTRVGLREERLHGTELALDTLTGLDSVRALVNVGDSPERAIVRAVRTA
JGI20203J14952_10320722	3300001452	Arctic Peat Soil	MSEPLDPVAAGVASLLKSLRTRTGLQEDRLSGTELPLNTLTGLDRVR
JGI26341J46601_100104113	3300003219	Bog Forest Soil	MSEPLDPAAPGVASVLKSLRTRTGLRVNRLHGTELDLDTLTGLD
Ga0066679_108952022	3300005176	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVRAL
Ga0066388_1041494213	3300005332	Tropical Forest Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELVLDTL
Ga0066388_1055931561	3300005332	Tropical Forest Soil	MAEPLDPVALGVASALKSLRTRAGLREERLLGTELVLDTLAGLDSVRARVNSGE
Ga0008090_135846772	3300005363	Tropical Rainforest Soil	MAEPLDPAAAGVASALKSLRTRVGLREERLHGTELTLDTLTGLDSV
Ga0070709_111885842	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPLDPVAPGVASALKSLRTRAGLREERLLGTELALDTLAGLDSVRARINSGESTERAIVHA
Ga0070713_1015522321	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPLDPVALGVASALKSLRTRAGLREERLLGTELALDTLAGLDSVRALVRSGESTERAIVR
Ga0070705_1014696461	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPLDPAALGVASALKSLRTRIGLREERLRGTELVLDTLTGLDSVRALVYAGQSP
Ga0070684_1007664061	3300005535	Corn Rhizosphere	MAEPLDPVVLGVASALKSLRTRSGLQEERLFGTEVALDMLTSLESVQ
Ga0066702_108976831	3300005575	Soil	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELALDTLTGLDSVRAL
Ga0068863_1009882381	3300005841	Switchgrass Rhizosphere	MAEPLDPVAPGVASALKSLRTRAGLREERLLGTELALDTLAGLDSVRALVRSGESTERAIVRAVQAAAG
Ga0070766_100863011	3300005921	Soil	MAEPIDPAALGVASALKSLRTRAGLREERLHGTEL
Ga0075017_1010851313	3300006059	Watersheds	MAEPVDPAVLGVASALKSLRTRAGLREERLHGTEL
Ga0075017_1014419201	3300006059	Watersheds	MAEPLDPAAPGVASALKSLRTRAGLREDRLHGTELA
Ga0070716_1001759302	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPTDPAALGVASVLKSLRTRVGLREDRLHGTEVALDTLTGLDSVRALVNAGESPERAIVRAVR
Ga0070712_1006419982	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELALDTLT
Ga0070765_1009000941	3300006176	Soil	MSEPLDPAAAGVASLLKSLRTRAGLQEDRLSGTELTLDPLTGLDRVRAFMTAGDRPER
Ga0079222_107677291	3300006755	Agricultural Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTEVLLDTLTGLDSVRVLVNAGQSPERAV
Ga0066659_104342033	3300006797	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVKALVNAGESPDRAIVR
Ga0079221_112004052	3300006804	Agricultural Soil	MAEPLDPAVFGVASILKSLRTRTGLREERLHGTEVDLDTLAGLE
Ga0079220_103536903	3300006806	Agricultural Soil	MAEPLDPAVFGVASILKSLRTRTGLREERLHGTEVDLDTLARLESVRVLIDAGETSEWAIVHAVQ
Ga0079220_118982701	3300006806	Agricultural Soil	MAEPIDPVAVGVASALKSLRTRAGLREERLLGTELALDTLAGLDS
Ga0075424_1004810321	3300006904	Populus Rhizosphere	MAEPIDPAAVGVASALKSLRTRAGLREERLLGTELVLDTLAGLDSVRARVNSGESTERAIVRAV
Ga0105245_102573714	3300009098	Miscanthus Rhizosphere	MAEPTDPAALGIASVLRSLRTRAGLREERLHGTEVALDTLTGLDSVR
Ga0105245_121690402	3300009098	Miscanthus Rhizosphere	MAEPFDPVALGVASALKSLRTRAGLREERLLGTELALDTLAGLDSVRARINSGESTERAIVR
Ga0105245_131710242	3300009098	Miscanthus Rhizosphere	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELALDTLTGLDSV
Ga0116216_107672612	3300009698	Peatlands Soil	MAEPLDPVALGIASALKSLRTRAGLREERLHGTELTLE
Ga0116219_102339272	3300009824	Peatlands Soil	MAEPLDPVALGIASALKSLRTRAGLREERLHGTELTLETLTGLDSVRALVHA
Ga0126378_104228562	3300010361	Tropical Forest Soil	MSEPLDPITAGVASALKSLRTRAGLRADRLAGAELPLDTLAGLESVREQVAAGAT
Ga0126378_129899131	3300010361	Tropical Forest Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTEVLLDTLTGLDSVR
Ga0134128_112378042	3300010373	Terrestrial Soil	MAEPTDPAALGIASVLRSLRTRAGLREERLHGTEVALDTLAGLDSVRALVNAGESPERAIVRAVRA
Ga0126381_1024556361	3300010376	Tropical Forest Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELAL
Ga0126347_14454802	3300010867	Boreal Forest Soil	MAEPLDPAALGVASALKSLRTRTGLREERLHGTELVLDTLEGLDTVQALVNDGE
Ga0126361_108379473	3300010876	Boreal Forest Soil	MPEPLDPVAAGVASLLKSLRTRAGLQEDRLSGTELPLSTLTGLDRVRA
Ga0126350_117563131	3300010880	Boreal Forest Soil	MAEPLDPAVLGVASTLKSLRTRTGLREERLYGTELALDMLTGLDSVRVLVNAGE
Ga0137376_101752935	3300012208	Vadose Zone Soil	MSEPLDPAVAGVASLLKSLRTRAGLRADRLAATELPLDPLT
Ga0137379_106034751	3300012209	Vadose Zone Soil	MAEPLDPAAPGVASVLKSLRTRTGLREERLQGTELALDTLTGLDGVRALVNAGESPERAIVRAV
Ga0137386_100765933	3300012351	Vadose Zone Soil	MAEPLDPAAPGVASVLKSLRTRTGLREERLQGTELALDTLTGLDGVRALVNAGESPERAIVRAVRAAASR
Ga0157374_104608871	3300013296	Miscanthus Rhizosphere	MAEPTDPAALGIASVLKSLRTRAGLREERLHGTEVALDTLTGLDSV
Ga0132257_1016562652	3300015373	Arabidopsis Rhizosphere	MAEPTDPAALGVASVLKSLRTRAGLREERLHGTELALDTLTGLDSVRALVNAGESPERAI
Ga0182041_115435612	3300016294	Soil	MAEPLDPATLGVASMLKSLRTRAGLREERLHGTELALDTLTGLDRVRALVNAGESPERAIVRAVRAAAG
Ga0182035_103854131	3300016341	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTELVLDTLTGLESIRVLVSA
Ga0182034_102225933	3300016371	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELVLDTLTGLDSVRVLVNAGQSPERAVVHAVRT
Ga0182040_115532392	3300016387	Soil	MAEPLDPATLGVASMLKSLRTRAGLREERLHGTELALDTLTG
Ga0187820_10461183	3300017924	Freshwater Sediment	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELLLDTLTGLD
Ga0187808_103926901	3300017942	Freshwater Sediment	MAEPLDPAVLGVASALKSLRTRAGLREERLRSTELILDTLTGLDSVRALVDAGDSPERAI
Ga0187785_106749171	3300017947	Tropical Peatland	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTEVLLDTLTGLDSVRVVVNAGQSPERAVVHAVR
Ga0187779_109217922	3300017959	Tropical Peatland	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELTLDTLTGLDSVRVLIDAGEPAERAI
Ga0187777_105124162	3300017974	Tropical Peatland	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVRVLINSGQPAERAI
Ga0187875_101756931	3300018035	Peatland	MAEPLDPATLGVASALKSLRTRTGLREERLQGTEL
Ga0187851_101812083	3300018046	Peatland	MAEPIDPAALGVASALKSLRTRAGLREERLHGTELVLDTLTGLDSVRALVN
Ga0193729_11618921	3300019887	Soil	MSDPLDPLAAGVASLLKSLRTRAGLQEDRLSGTELTLDPLTGLERVRAFMTA
Ga0210401_111661701	3300020583	Soil	MAQPIDPAALGVASTLKSLRTRTGLREERLHNTELTLDTLM
Ga0210398_108814211	3300021477	Soil	MTEPLDPAVLGVASALKSLRTRTGLREERLYGTELA
Ga0210402_115678742	3300021478	Soil	MAEPGDGAVQGVVSALTRLRTRTGLREERLRGTELALGS
Ga0210410_110769951	3300021479	Soil	MAEPLDPAALGVASALKSLRTRIGLREERLRGTELVLDTLTGLDSVRAL
Ga0208478_10519251	3300025475	Arctic Peat Soil	MSEPLDPVAAGVASLLKSLRTRTGLQEDRLSGTELPLDMLTGLDQVRAFMAAGDLPERAI
Ga0207692_103529761	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPLDPATVGVASVLKSLKTRTGLREERLYGTEVALDSLVGLASVRALIDAGET
Ga0207699_101029551	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPLDPVAPGVASALKSLRTRAGLREERLLGTELALDTLAGLDSVRALVRSGESTERAIVRAVQAAA
Ga0207693_105122711	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPLDPAAPGVASALKSLRTRAGLREDRLHGTELALDP
Ga0207663_111944562	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPLDPAIPGVASVLKSLRTRTGLREERLHGTELDLDTLLG
Ga0207687_102369291	3300025927	Miscanthus Rhizosphere	MAEPTDPAALGIASVLRSLRTRAGLREERLHGTEVALDTLTGLDSV
Ga0207664_108448591	3300025929	Agricultural Soil	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELALDTLTGLDSVRALVNVGES
Ga0207641_105675731	3300026088	Switchgrass Rhizosphere	MAEPLDPVAPGVASALKSLRTRAGLREERLLGTELALDTLAGLDSVRARINSGESTERAIVHAVRAA
Ga0207674_110135602	3300026116	Corn Rhizosphere	MAEPLDPVAPGVASALKSLRTRAGLREERLLGTELALDTLAGLDSGGDPAQAHNCA
Ga0209330_10889232	3300027619	Forest Soil	MPNVTDPLAVGVASALKSLRTRAGLREDRLSDTEVVLD
Ga0209178_12638152	3300027725	Agricultural Soil	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELALDTLTGLDSVR
Ga0209040_100430671	3300027824	Bog Forest Soil	MSEPLDPAAPGVASVLKSLRTRTGLRVNRLHGTELDLDTLTGL
Ga0209180_105580981	3300027846	Vadose Zone Soil	MAEPQDPAALGVASALKSLRTRAGLREDRLRGTELALDTLTGLDSVRALVN
Ga0209169_101715882	3300027879	Soil	MGEPLDPAALGVASALKSLRTRTGLREERLQGTELALDTLLGLESVRALINGGESPERAIIRAV
Ga0209624_110655891	3300027895	Forest Soil	MAEPLDPAALGVASALKSLRTRTGLREERLHGTELVLDTLIGLD
Ga0302235_101858113	3300028877	Palsa	MAEPADPVTAGLASVLKSLRTRAGLTEGRLAGTEIPVDVLTGLGSVREFMAA
Ga0311340_105686002	3300029943	Palsa	MSEPPNPASVGVASILKSLRTRAGLREDRLSDTELVLDPLLGLDGV
Ga0302283_12696532	3300029994	Fen	MTEPLSPAAAGVASVLKSLRTRAGLREDRLHGTELA
Ga0302300_10984911	3300030042	Palsa	MTEPLSPAAAGVASVLKSLRTRAGLREDRLHGTELALDTLAGLDSVRER
Ga0311355_118348941	3300030580	Palsa	MAEPIDPAALGVASALKSLRTRAGLREERLHGTELVLDTLTGLASVRTLVNAG
Ga0311354_111705632	3300030618	Palsa	MAEPLDPVTAGLASVLKSLRTRAGLTEGRLAGTEIPVDVLTGLGSVREFMAAGDTASRA
Ga0302180_101578054	3300031028	Palsa	MTEPLDPSAAGVASALKNLRARAGLTRERLSGSELARDTLAGLPVVRQ
Ga0302326_105078914	3300031525	Palsa	MAEPLDPVTAGLASVLKSLRTRAGLTEGRLAGTEIPVDVLTGLGSVREFMAA
Ga0318516_101071321	3300031543	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRSTELVLDTLTGLESVRV
Ga0318516_106281001	3300031543	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTELVLDTLTGLESIRVLVNAGQSPERAM
Ga0318534_107229981	3300031544	Soil	MAEPLDPAVLGVASVLKSLRTRTGLREERLRGTELVLDTLTGLESIRVLVSAGQSPE
Ga0318573_100202777	3300031564	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVR
Ga0318561_104863861	3300031679	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLD
Ga0307474_101636994	3300031718	Hardwood Forest Soil	MTEPLDPAILGVASALKSLRTRTGLREERLHGTELALG
Ga0318500_104154111	3300031724	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTELV
Ga0318535_100683711	3300031764	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVRALINAGEPPE
Ga0318546_100545771	3300031771	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSV
Ga0318566_103179431	3300031779	Soil	MAEPLDPATLGVASMLKSLRTRAGLREERLHGTELALDTLTGLDRVR
Ga0307478_114688312	3300031823	Hardwood Forest Soil	MAEPLDPAVLGVASTLKSLRTRTGLREERLQGTELALDML
Ga0318499_100248571	3300031832	Soil	MAEPLDPATLGVASMLKSLRTRAGLREERLHGTELALDTLTGLDRVRALVNAGESPERAIVRAVR
Ga0318544_101100451	3300031880	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELVLDTLTGLESIRVLVNAGQSPERAVVHAV
Ga0306925_109757201	3300031890	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRSTELVLDTLTGLESVRVLVNAGQS
Ga0318536_100267153	3300031893	Soil	MAEPLDPATLGVASMLKSLRTRAGLREERLHGTELALDTLTGLD
Ga0318522_100721223	3300031894	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVRALINAGEPPERAI
Ga0318551_102169722	3300031896	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTELVLDTLTGLESIRVLVNAGQSPERAVVH
Ga0318551_102678093	3300031896	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDT
Ga0318520_105031202	3300031897	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRSTELVLDTLTGLESIRVL
Ga0306921_125448701	3300031912	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTEVLLDTLTGLD
Ga0308174_109577612	3300031939	Soil	MAEPLDPVALGVASALKSLRTRAGLREERLLGTELVLDTLAGLDSVRALINSGESTERA
Ga0310912_104052841	3300031941	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELVLDTLTGLES
Ga0318530_104752362	3300031959	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTELVLDTLTGLESIRVLVNAGQSPER
Ga0318559_103033541	3300032039	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELVLDTLTGLDSVRVLVNAGQSPERAVVH
Ga0318549_102020701	3300032041	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRSTELVLDTLTGLESVRVLVNAGQSPERAVVHAV
Ga0318556_100717163	3300032043	Soil	MAEPLDPATLGVASMLKSLRTRAGLREERLHGTELALDTLTGLDRVRALVNAG
Ga0318556_105455781	3300032043	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELVLDTLTGLESVRHLVREQPQ
Ga0318575_100385581	3300032055	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVRALINAGEPPERAS
Ga0318513_100477824	3300032065	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTLTGLDSVRALINAGEPPERAIVRAVRAAVGT
Ga0306924_107984912	3300032076	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELVLA
Ga0318525_102047502	3300032089	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTELVLDTLTGLESIR
Ga0318518_101405481	3300032090	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTELVLDTLTGLESVRVLVNAGQSPER
Ga0318577_101972423	3300032091	Soil	MAEPLDPAALGVASALKSLRTRAGLREERLHGTELALDTL
Ga0335085_118334992	3300032770	Soil	MAEPLDPAVLGVASALKSLRTRIGLREERLRGTELVLDTLTGL
Ga0335079_122653592	3300032783	Soil	MAEPIDPAVLGVASALKSLRTRIGLREERLRGTELPLDTLTGLDSVRVLVNTG
Ga0335078_100494482	3300032805	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTEVLLDTLTGLDSVRVLVNAGQSPERAVTPSARPRARSSRR
Ga0335080_104105093	3300032828	Soil	MAEPLDPAVLGVASALKSLRTRTGLREERLRGTEVLL
Ga0335069_104992961	3300032893	Soil	MAEPLDPAALGVASALKSLRTRVGLREERLRGTELVLDTLTGLESVRVLVNAGQSPERAVVH
Ga0335075_111529421	3300032896	Soil	MAEPLDPAAVGVASELKSLRTRTGLREERLHGTELQLDTLAGLDSVRALTRAGESPERAIVRAV
Ga0335083_104110121	3300032954	Soil	MAEPLDPVALGVASALKSLRTRAGLREERLLGTELVLDTLAGLDSVRALVNSGESTERAI
Ga0335083_111724911	3300032954	Soil	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELTLDTLTGLDSVRVLI
Ga0335077_118999112	3300033158	Soil	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELALDTLTGLDSVRALINTGESPER
Ga0335077_121940751	3300033158	Soil	MAEPLDPAALGVASALKSLRTRAGLREDRLHGTELALDTLTGLDSVRALINAGESPERAIVRAVRTAAGT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069266

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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