NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F053534

Metagenome Family F053534

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F053534
Family Type Metagenome
Number of Sequences 141
Average Sequence Length 90 residues
Representative Sequence LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSQSER
Number of Associated Samples 92
Number of Associated Scaffolds 141

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 73.05 %
% of genes near scaffold ends (potentially truncated) 39.01 %
% of genes from short scaffolds (< 2000 bps) 82.98 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.79

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.617 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere
(28.369 % of family members)
Environment Ontology (ENVO) Unclassified
(60.993 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(35.461 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 64.71%    β-sheet: 0.00%    Coil/Unstructured: 35.29%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.79
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
f.20.1.1: Clc chloride channeld4enea_4ene0.64125
f.57.1.1: MgtE membrane domain-liked2zy9a32zy90.62221
f.35.1.1: Multidrug efflux transporter AcrB transmembrane domaind1iwga81iwg0.62172
f.61.1.1: Multidrug and toxic compound extrusion (MATE) transportersd3mkua_3mku0.61051
a.100.1.6: Glycerol-3-phosphate dehydrogenased1evya11evy0.60898

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 141 Family Scaffolds
PF02910Succ_DH_flav_C 46.81
PF06123CreD 21.28
PF00753Lactamase_B 7.09
PF10027DUF2269 4.26
PF01127Sdh_cyt 2.13
PF03435Sacchrp_dh_NADP 1.42
PF08818DUF1801 0.71
PF02912Phe_tRNA-synt_N 0.71
PF00015MCPsignal 0.71
PF03641Lysine_decarbox 0.71
PF07332Phage_holin_3_6 0.71

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 141 Family Scaffolds
COG4452Inner membrane protein CreD involved in colicin E2 resistanceDefense mechanisms [V] 21.28
COG2009Succinate dehydrogenase/fumarate reductase, cytochrome b subunitEnergy production and conversion [C] 2.13
COG2142Succinate dehydrogenase, hydrophobic anchor subunitEnergy production and conversion [C] 2.13
COG0840Methyl-accepting chemotaxis protein (MCP)Signal transduction mechanisms [T] 1.42
COG0016Phenylalanyl-tRNA synthetase alpha subunitTranslation, ribosomal structure and biogenesis [J] 0.71
COG1611Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) familyNucleotide transport and metabolism [F] 0.71
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.71
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.71
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.71

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.62 %
UnclassifiedrootN/A6.38 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_17415517Not Available1401Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c1908485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas549Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100846505All Organisms → cellular organisms → Bacteria → Proteobacteria3172Open in IMG/M
3300000956|JGI10216J12902_100818952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2188Open in IMG/M
3300000956|JGI10216J12902_103817701All Organisms → cellular organisms → Bacteria → Proteobacteria3224Open in IMG/M
3300000956|JGI10216J12902_115763055All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas598Open in IMG/M
3300003312|P12013IDBA_1004163All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00078505Open in IMG/M
3300003312|P12013IDBA_1008536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas5185Open in IMG/M
3300004016|Ga0058689_10162551All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas523Open in IMG/M
3300004114|Ga0062593_100169915All Organisms → cellular organisms → Bacteria1688Open in IMG/M
3300004114|Ga0062593_101456341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057735Open in IMG/M
3300004156|Ga0062589_100910609All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas811Open in IMG/M
3300004156|Ga0062589_101076378All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057758Open in IMG/M
3300004463|Ga0063356_105416921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas548Open in IMG/M
3300004480|Ga0062592_100479450All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1020Open in IMG/M
3300005293|Ga0065715_10014313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae2400Open in IMG/M
3300005339|Ga0070660_101392532All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens596Open in IMG/M
3300005343|Ga0070687_100246103All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola1108Open in IMG/M
3300005347|Ga0070668_100077472All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2599Open in IMG/M
3300005347|Ga0070668_100513342All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1039Open in IMG/M
3300005353|Ga0070669_100508592All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1000Open in IMG/M
3300005354|Ga0070675_100150254All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1997Open in IMG/M
3300005364|Ga0070673_100052685All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas3194Open in IMG/M
3300005455|Ga0070663_100394670All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1130Open in IMG/M
3300005457|Ga0070662_101433686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas595Open in IMG/M
3300005459|Ga0068867_100668863All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas913Open in IMG/M
3300005459|Ga0068867_101426755All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300005543|Ga0070672_101898196Not Available536Open in IMG/M
3300005548|Ga0070665_101924457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas597Open in IMG/M
3300005616|Ga0068852_102076008All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas590Open in IMG/M
3300005840|Ga0068870_10856109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola639Open in IMG/M
3300005841|Ga0068863_101147830All Organisms → cellular organisms → Bacteria → Proteobacteria782Open in IMG/M
3300006169|Ga0082029_1343171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas517Open in IMG/M
3300006169|Ga0082029_1528651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1096Open in IMG/M
3300006353|Ga0075370_10280008All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas990Open in IMG/M
3300006358|Ga0068871_101189242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.715Open in IMG/M
3300006876|Ga0079217_10288247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas901Open in IMG/M
3300007004|Ga0079218_10482519All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1089Open in IMG/M
3300007004|Ga0079218_13895812All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas507Open in IMG/M
3300009168|Ga0105104_10312085All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas865Open in IMG/M
3300009789|Ga0126307_10222703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1515Open in IMG/M
3300009840|Ga0126313_10907525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola719Open in IMG/M
3300009840|Ga0126313_11455544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas568Open in IMG/M
3300010036|Ga0126305_10332485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas992Open in IMG/M
3300010042|Ga0126314_10484351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.897Open in IMG/M
3300010166|Ga0126306_10175299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1607Open in IMG/M
3300010227|Ga0136219_1002591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2129Open in IMG/M
3300010229|Ga0136218_1001107All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas4075Open in IMG/M
3300012913|Ga0157298_10340032All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas548Open in IMG/M
3300012915|Ga0157302_10507410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas522Open in IMG/M
3300013102|Ga0157371_11351806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas552Open in IMG/M
3300014326|Ga0157380_12321931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens601Open in IMG/M
3300014487|Ga0182000_10311757All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp.661Open in IMG/M
3300017792|Ga0163161_11718807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas556Open in IMG/M
3300018429|Ga0190272_10731682All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens897Open in IMG/M
3300018466|Ga0190268_10260003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens1006Open in IMG/M
3300018481|Ga0190271_10706921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1131Open in IMG/M
3300018920|Ga0190273_10433495All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057937Open in IMG/M
3300018920|Ga0190273_10518381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas877Open in IMG/M
3300019356|Ga0173481_10634036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas567Open in IMG/M
3300020202|Ga0196964_10494790Not Available597Open in IMG/M
3300025903|Ga0207680_10306992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571107Open in IMG/M
3300025907|Ga0207645_10602347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas746Open in IMG/M
3300025918|Ga0207662_10658239All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas732Open in IMG/M
3300025923|Ga0207681_10101273All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2078Open in IMG/M
3300025923|Ga0207681_10553639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens947Open in IMG/M
3300025925|Ga0207650_10360036All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1198Open in IMG/M
3300025926|Ga0207659_10884060All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SM33768Open in IMG/M
3300025930|Ga0207701_10413897Not Available1160Open in IMG/M
3300025932|Ga0207690_10865103All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057749Open in IMG/M
3300025933|Ga0207706_10517296All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571029Open in IMG/M
3300025945|Ga0207679_10147479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1910Open in IMG/M
3300025945|Ga0207679_11325097All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens661Open in IMG/M
3300025960|Ga0207651_10515713All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1035Open in IMG/M
3300025972|Ga0207668_10062436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2623Open in IMG/M
3300026067|Ga0207678_10824276All Organisms → cellular organisms → Bacteria → Proteobacteria819Open in IMG/M
3300026089|Ga0207648_11195014All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas714Open in IMG/M
3300026095|Ga0207676_10497355All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis1157Open in IMG/M
3300027750|Ga0209461_10057796All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas804Open in IMG/M
3300027876|Ga0209974_10025161Not Available1971Open in IMG/M
3300027886|Ga0209486_11057405All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens548Open in IMG/M
3300028587|Ga0247828_10007305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas3944Open in IMG/M
3300028587|Ga0247828_10814152All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas593Open in IMG/M
3300028589|Ga0247818_10413600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola910Open in IMG/M
3300028590|Ga0247823_10990191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas631Open in IMG/M
3300028592|Ga0247822_10004722All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas8992Open in IMG/M
3300028592|Ga0247822_10259237All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1318Open in IMG/M
3300028592|Ga0247822_10363582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1120Open in IMG/M
3300028592|Ga0247822_11833719All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas518Open in IMG/M
3300028597|Ga0247820_10330172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola1005Open in IMG/M
3300028597|Ga0247820_10332002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola1002Open in IMG/M
3300030511|Ga0268241_10163985Not Available549Open in IMG/M
3300031548|Ga0307408_100092852All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2282Open in IMG/M
3300031548|Ga0307408_100134922All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1930Open in IMG/M
3300031548|Ga0307408_100454790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1111Open in IMG/M
3300031548|Ga0307408_100540995All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens1026Open in IMG/M
3300031548|Ga0307408_100550544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1018Open in IMG/M
3300031548|Ga0307408_101998588All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas557Open in IMG/M
3300031731|Ga0307405_10976923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas721Open in IMG/M
3300031731|Ga0307405_11880105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas534Open in IMG/M
3300031824|Ga0307413_10900623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas751Open in IMG/M
(restricted) 3300031825|Ga0255338_1000015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas769578Open in IMG/M
(restricted) 3300031825|Ga0255338_1032898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae2325Open in IMG/M
3300031852|Ga0307410_10032063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas3377Open in IMG/M
3300031852|Ga0307410_10043249All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2983Open in IMG/M
3300031852|Ga0307410_10093630All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2138Open in IMG/M
3300031852|Ga0307410_10222166All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1454Open in IMG/M
3300031852|Ga0307410_11617690All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas573Open in IMG/M
3300031852|Ga0307410_11965990All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas521Open in IMG/M
3300031852|Ga0307410_11995080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas518Open in IMG/M
3300031854|Ga0310904_10391341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD0057908Open in IMG/M
3300031901|Ga0307406_10707814All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas842Open in IMG/M
3300031903|Ga0307407_10331304All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1072Open in IMG/M
3300031903|Ga0307407_10430971All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola953Open in IMG/M
3300031903|Ga0307407_10973909All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas654Open in IMG/M
3300031911|Ga0307412_10051918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00572713Open in IMG/M
3300031911|Ga0307412_10073846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2335Open in IMG/M
3300031911|Ga0307412_12311591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas502Open in IMG/M
3300031995|Ga0307409_100207627All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571758Open in IMG/M
3300031995|Ga0307409_100368101All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1362Open in IMG/M
3300031995|Ga0307409_101327525All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens745Open in IMG/M
3300032002|Ga0307416_100522231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1256Open in IMG/M
3300032002|Ga0307416_100550587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1227Open in IMG/M
3300032004|Ga0307414_10162800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1774Open in IMG/M
3300032004|Ga0307414_10378807All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1223Open in IMG/M
3300032004|Ga0307414_10613895All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae977Open in IMG/M
3300032004|Ga0307414_11208902All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens700Open in IMG/M
3300032005|Ga0307411_10094072Not Available2100Open in IMG/M
3300032005|Ga0307411_10282353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas1322Open in IMG/M
3300032005|Ga0307411_10497594All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola1030Open in IMG/M
3300032005|Ga0307411_10684676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola891Open in IMG/M
3300032013|Ga0310906_11009235Not Available598Open in IMG/M
3300032013|Ga0310906_11469365All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas501Open in IMG/M
3300032075|Ga0310890_10781771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens754Open in IMG/M
3300032075|Ga0310890_11085379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens647Open in IMG/M
3300032126|Ga0307415_100167548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. URHD00571710Open in IMG/M
3300032126|Ga0307415_100442396Not Available1121Open in IMG/M
3300032126|Ga0307415_100505783All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis flava1057Open in IMG/M
3300032126|Ga0307415_101680366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Caenibius → Caenibius tardaugens612Open in IMG/M
3300032144|Ga0315910_10847261All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas sediminicola712Open in IMG/M
3300033412|Ga0310810_10215244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas2154Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere28.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil10.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.09%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere5.67%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil4.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.55%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.42%
Ore Pile And Mine Drainage Contaminated SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil1.42%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest1.42%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.42%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.42%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.42%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave1.42%
SoilEngineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil1.42%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.71%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.71%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.71%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.71%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.71%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.71%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003312Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P1 sampleEnvironmentalOpen in IMG/M
3300004016Agave microbial communities from Guanajuato, Mexico - As.Ma.rzHost-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010227Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2EngineeredOpen in IMG/M
3300010229Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 1EngineeredOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300020202Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027750Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300030511Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031825 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T4_195EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_029179202088090014SoilLNETPLWLAYLVSAVAAYLLVVKLGWRIVPSILAGAFVSVVGWGLLYSLTAEDLRPSFWRVDLSLNISFAVIFAGAGAAIGFATRGRQEP
ICChiseqgaiiDRAFT_190848513300000033SoilHRRHQVHQXEGARVLNETXLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLXASFALIFAGAGAAIAFAMKSNQSER*
INPhiseqgaiiFebDRAFT_10084650523300000364SoilLNETPLWLAYLVSAVAAYLLVVKLGWRIVPSILAGAFVSVVGWGLLYSLTAEDLRPSFWRVDLSLNISFAVIFAGAGAAIGFATRGRQEP*
JGI10216J12902_10081895213300000956SoilSLVHQAEGPRVLNETWLWLAYLASALAAYLLVVKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP*
JGI10216J12902_10381770123300000956SoilLNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFALKSREAE*
JGI10216J12902_11576305513300000956SoilETLLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHS*
P12013IDBA_100416373300003312Ore Pile And Mine Drainage Contaminated SoilLNETLLWLLYLLSAAAAFAAVFRLGWRIVPAMLAGTAVTLVGWLLMYLTAKESRPAFWEVDLSLNASFALIFAGAGAAFGFFRRGRTNV*
P12013IDBA_100853623300003312Ore Pile And Mine Drainage Contaminated SoilLNETLLWLLYLLSAGAAFLAVQRGGSRLVPAILAGTFVTIAGWALLYALAGEDERPDFWQVDLSLNASFAMVFAAAGAAIAFAIKSRQPD*
Ga0058689_1016255113300004016AgaveLNETLLWLAYLASGVAAFLLVAKLGLRIVPSILAGSFVSVVAWGLLYLFTAEELRPSFWRVDLSLSVSFAVIFAGAGAAIGFATRGRQAP*
Ga0062593_10016991523300004114SoilLNETLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE*
Ga0062593_10145634123300004114SoilLNETLLWLLYLVSAVVAFAAVHRLGWRIVPSILAGALVTSIGWGLLYLVTAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRPSD*
Ga0062589_10091060923300004156SoilLNETLLWLLYMVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAGIAFAMK
Ga0062589_10107637823300004156SoilRLHAHGRGPVHQAQGPRVLNETLLWLLYLVSAVVAFAAVHRLGWRIVPSILAGALVTSIGWGLLYLVTAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRPSD*
Ga0063356_10541692113300004463Arabidopsis Thaliana RhizosphereLNETLLWLLYLVSAVFGFIAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKGREAE*
Ga0062592_10047945023300004480SoilLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER*
Ga0065715_1001431323300005293Miscanthus RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH*
Ga0070660_10139253223300005339Corn RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSQSER*
Ga0070687_10024610313300005343Switchgrass RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSGR*
Ga0070668_10007747233300005347Switchgrass RhizosphereTLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE*
Ga0070668_10051334213300005347Switchgrass RhizosphereLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP*
Ga0070669_10050859223300005353Switchgrass RhizosphereLNETLLWLLYLVSAIVAFLTVKKLGWRIVPSMLAGAFVSVLGWGAMFLLAAEDSRPAFWRLDLSMNASFGLIFAGAGAAIAFAMKSREAN*
Ga0070675_10015025423300005354Miscanthus RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAGIAFAMKSSRSEH*
Ga0070673_10005268523300005364Switchgrass RhizosphereLNETWLWLAYLASAVAAFLLVVKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP*
Ga0070663_10039467023300005455Corn RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER*
Ga0070662_10143368623300005457Corn RhizosphereRVLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP*
Ga0068867_10066886323300005459Miscanthus RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTILGWVLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER*
Ga0068867_10142675523300005459Miscanthus RhizosphereLNETLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAF
Ga0070672_10189819613300005543Miscanthus RhizosphereLNETILWLLYAFGAVVAYAAVQKLGWRIVPSTLVGMIPTLLGWGLLYLLTAEDDRPAWWRLDLSMNLSFALIFAACGA
Ga0070665_10192445723300005548Switchgrass RhizosphereLNETLLWLLYLVSAVTAFLTVRRLGWRISPSMLAGAAVTAVGWAIIYALTSEENRPEFWRVDLSLNASFALIFAGAGAALAFALKNREPDS*
Ga0068852_10207600813300005616Corn RhizosphereAHRRHQVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER*
Ga0068870_1085610923300005840Miscanthus RhizosphereAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSQSER*
Ga0068863_10114783023300005841Switchgrass RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSSRSEH*
Ga0082029_134317113300006169Termite NestHRRGLVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSILAGALLTAIGWALLYLVTAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRRSD*
Ga0082029_152865123300006169Termite NestLNETLLWLLYLVSAVTAFLTVQKRGWRIVPSMLAGTLVTVVGWLLIFALTAEDKRPPFWRLDLSLNASFALIFAGAGAALAFALRQREER*
Ga0075370_1028000823300006353Populus EndosphereMNETLLWLLYLVSAVVAFLAIQKLDWRIVPSILAGTFVSIVGWGLIFALTAQDDRPAFWRLDLSMNASFALIFAGAGAAIAFALKSREAS*
Ga0068871_10118924223300006358Miscanthus RhizosphereLNEALLWLLYLISGAVAFLAVHKLSWRIVPSILGGAFVTAIGWGLLYLVIAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRHSD*
Ga0079217_1028824723300006876Agricultural SoilLNETLLWLLYLVSAVVAFLAVQKFGWRLVPSMLAGTLVTVLGWLLIYLLTAEAKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE*
Ga0079218_1048251923300007004Agricultural SoilLNETLLWLLYLVSAVVAFVTVQKLGWRLVPSMFAGTLVTVLGWLVIYLLTVEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE*
Ga0079218_1389581213300007004Agricultural SoilLNETLLWLLYLVSAVVAFLTVQKLGWRIVPSIFAGTAVSVVGWALLYALAAEENRPEFWRLDLSLNASFALIFAGAGAALAFALKSRESHN*
Ga0105104_1031208513300009168Freshwater SedimentLNETLLWLLYLISAVIAFLTVQKLGWRIVPSMFAGTAVSVVGWVLLYALAAEENRPEFWRLDLSLNASFALIFAGAGAALAFALKGREPHN*
Ga0126307_1022270323300009789Serpentine SoilLNETLLWLLYLVSAAVAFLAVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFAMKSREAE*
Ga0126313_1090752513300009840Serpentine SoilGARILNETLLWLLYLVSAAVAFLAVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFAMKSREAE*
Ga0126313_1145554423300009840Serpentine SoilLNETLLWLLYLVSAAVAFFTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE*
Ga0126305_1033248523300010036Serpentine SoilLNETLLWLLYLVSAAVAFFTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFAMKSREVE*
Ga0126314_1048435123300010042Serpentine SoilLNETLLWLLYLVSAAVAFFTVQNLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKQPAFWRLDLSLNASFALIFAGAGAALAFAMKSREAE*
Ga0126306_1017529913300010166Serpentine SoilLNETLLWLLYLVSAAVAFLAVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTVEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE*
Ga0136219_100259133300010227SoilLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTILGWVLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH*
Ga0136218_100110723300010229SoilLNETLLWLLYLVSAAVAFLTVQKLSWRIVPSMLAGTVVTTVGWGMIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH*
Ga0157298_1034003213300012913SoilYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE*
Ga0157302_1050741023300012915SoilLNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE*
Ga0157371_1135180613300013102Corn RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGVGAAIAFAMKSNQSER*
Ga0157380_1232193123300014326Switchgrass RhizosphereLNEILLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGVGAAIAFAMK
Ga0182000_1031175723300014487SoilLNETLLWLLYLVSAVVAFLAVQRLGWRLVPSMLAGTIVTVLGWLPIFLLTAQDKRPPFWRLDLSLNASFALIFAAAGAALAFAMKDREAR*
Ga0163161_1171880723300017792Switchgrass RhizosphereLNEALLWLLYLISGAVAFLAVHKLSWRIVPSILGGAFVTAIGWGLLYLVIAEDKRPAFWRLDLSLNVSFAVIFAGAGAAAAFALSRHSD
Ga0190272_1073168223300018429SoilLNETLLWLLYLVSAVVAFLTVQKLGWRIVPSIFAGTAVSVVGWALLYALAAEEKRPEFWRLDLSLNASFALIFAGAGAALAFALKSREPHN
Ga0190268_1026000313300018466SoilLNETLLWLLYLVSAVTAFLTVQKLGWRIVPSMFAGTAVTIVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHN
Ga0190271_1070692123300018481SoilLNETLLWLLYMVSAVVGFLAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKGREAE
Ga0190273_1043349513300018920SoilAEGARILNETLLWLLYLVSAVTAFLTVRNLGWRIVPSMLAGTAVTVVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHN
Ga0190273_1051838123300018920SoilLNETLLLLLYLVSAVTAFLTVRKLGWRIVPSTLAGTAVTVVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKS
Ga0173481_1063403613300019356SoilLNETLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE
Ga0196964_1049479023300020202SoilLSETLLWLLYVAGAAAACAAVYRLGWKIVPSTLAATAITVVGWAALYFLADEEKRPSFWEVDLSLNACFALIFAGAGAALGLFLASRERAG
Ga0207680_1030699213300025903Switchgrass RhizosphereAFLLVVKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP
Ga0207645_1060234723300025907Miscanthus RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER
Ga0207662_1065823923300025918Switchgrass RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSGR
Ga0207681_1010127323300025923Switchgrass RhizosphereLNETWLWLAYLASAVAAFLLVVKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGWKAP
Ga0207681_1055363923300025923Switchgrass RhizosphereLNETLLWLLYLVSAIVAFLTVKKLGWRIVPSMLAGAFVSVLGWGAMFLLAAEDSRPAFWRLDLSMNASFGLIFAGAGAAIAFAMKSREAN
Ga0207650_1036003623300025925Switchgrass RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWSLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER
Ga0207659_1088406023300025926Miscanthus RhizosphereRLHAHRRHQVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAGIAFAMKSSRSEH
Ga0207701_1041389723300025930Corn, Switchgrass And Miscanthus RhizosphereLNETILWLLYLVGAAVAFAAVHKFDWRIVPSTVAGTVPTLLGWGVLYLLTAEDKRPNWWRVDLSLNLSLALIFAACGAAL
Ga0207690_1086510323300025932Corn RhizosphereGPRVLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP
Ga0207706_1051729623300025933Corn RhizosphereRVLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP
Ga0207679_1014747923300025945Corn RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH
Ga0207679_1132509713300025945Corn RhizosphereLNETLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFA
Ga0207651_1051571323300025960Switchgrass RhizosphereLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP
Ga0207668_1006243633300025972Switchgrass RhizosphereTLLWLLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE
Ga0207678_1082427623300026067Corn RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVAIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER
Ga0207648_1119501423300026089Miscanthus RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTILGWVLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH
Ga0207676_1049735533300026095Switchgrass RhizosphereEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH
Ga0209461_1005779623300027750AgaveLNETLLWLAYLASGVAAFLLVAKLGLRIVPSILAGSFVSVVAWGLLYLFTAEELRPSFWRVDLSLSVSFAVIFAGAGAAIGFATRGRQAP
Ga0209974_1002516113300027876Arabidopsis Thaliana RhizosphereLNETLLWLLYLVSAVVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIF
Ga0209486_1105740513300027886Agricultural SoilLNETLLWLLYLVSAVVAFVTVQKLGWRLVPSMFAGTLVTVLGWLVIYLLTVEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMK
Ga0247828_1000730513300028587SoilLNETLLWLLYLVSAVVGFLAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKGREAE
Ga0247828_1081415213300028587SoilLNETLLWLLYLVSAAVGFVAVHRLGWRLVPSMLAGTLVTVVAWLPIYLLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFALKDREAE
Ga0247818_1041360013300028589SoilLYLVSAVVAFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE
Ga0247823_1099019113300028590SoilLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWALIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD
Ga0247822_1000472273300028592SoilLNETVLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWALIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD
Ga0247822_1025923723300028592SoilLNETVLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWGMIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD
Ga0247822_1036358223300028592SoilLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGVGAAIAFAMKSNQSER
Ga0247822_1183371913300028592SoilPRLHTHRRGPVHQAEGARILNETLLWLLYLVSAVVGFLAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKDREAE
Ga0247820_1033017213300028597SoilPRLHAHRRDQVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGVGAAIAFAMKSNQSER
Ga0247820_1033200223300028597SoilPVHQAEGARILNETVLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWALIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD
Ga0268241_1016398513300030511SoilLNETILWLLYVVGAAVAFAAVHKLGWRIVPSTIAGTVPTFLGWGLIYLLTAEDKRPAWWRVDLSLNLSFALIFAACG
Ga0307408_10009285213300031548RhizosphereLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDERPAFWRLDLSMNASFALIFAGAGAAIAFAMKSSQSAD
Ga0307408_10013492223300031548RhizosphereLNETLLWLLYLVSAVTAFLTVKKLGWRIVPSMLAGTAVTVVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHN
Ga0307408_10045479023300031548RhizosphereLNETLLWLLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSSQSAD
Ga0307408_10054099523300031548RhizosphereLNETLIWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQ
Ga0307408_10055054423300031548RhizosphereLNETLLWLLYLVSALVAFLAVQKLGWRIVPSIFAGTAVSVVGWALLYALAADENRPEFWRLDLSLNASFALIFAGAGAALAFALKSREPHN
Ga0307408_10199858813300031548RhizosphereNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKNREAE
Ga0307405_1097692313300031731RhizosphereLNETLLWLLYLASAAVAFLTVQKLGWRIVPSMLAGTIVTIIGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER
Ga0307405_1188010513300031731RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE
Ga0307413_1090062313300031824RhizosphereAVHQAEGARILNETLLWLLYLVSAAVAFFTVQKLAWRFVPSMLAGTLVTVLGWLMIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE
(restricted) Ga0255338_10000155923300031825Sandy SoilLNETLLWLLYLVSAAVAFLTVQKLSWRIVPSMLAGTVVTIVGWGMIFLLTAEDKRPVFWRLDLSLNASFALIFAGAGAAIAFAMKYNQSDR
(restricted) Ga0255338_103289823300031825Sandy SoilLNETLLWLLYLVSAAVAFLTVQKLSWRIVPSMLAGTVVTIVGWGLIFLLTAEEKRPAFWRLDLSLNASFALIFAGAGAAMAFAMKSSRSEH
Ga0307410_1003206313300031852RhizosphereLNETLLWLLYLVSAVVAFLAVQKLGWRLVPSMLAGTLVTVLGWLVIYVLTAEDKRPAFWRLDLSLNASFALIFAGAGAALAFAMKSREAE
Ga0307410_1004324933300031852RhizosphereLNETLLWLLYLVSAVTAFLTVKKLGWRIVPSMLAGTAVTVLGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREPHN
Ga0307410_1009363013300031852RhizosphereLYLVSAAVAFLTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE
Ga0307410_1022216623300031852RhizosphereLNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKNREAE
Ga0307410_1161769013300031852RhizosphereRRGSVHQAEGARILNETLLWLLYLVSAVVAFLAVQRLGWRIVPSIFAGTAVSVVGWALLYALAAEENRPEFWRLDLSLNASFALIFAGAGAALAFALKSRDPHN
Ga0307410_1196599013300031852RhizosphereLNETLLWLLYLVSAVVGFLSVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRLDLSLNASFALIFAGAGAALAFALKNREAE
Ga0307410_1199508023300031852RhizosphereLNETILWLLYLVGAVAAFHAVQRLQWRIVPSMLGGTMVTVAGWAVMYLLTGAEDRPPFWQLDLSLNASFALIFAGAGAALAFALPHLKRR
Ga0310904_1039134123300031854SoilTWLWLAYLASAVAAFLLVMKRGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKAP
Ga0307406_1070781423300031901RhizosphereLNETLLWLLYLVSAVVAFLTVQKLGWRIVPSIFAGTAVSVVGWALLYALAAEENRPEFWRLDLSLNASFALIFAGAGAALAFALKSREPHN
Ga0307407_1033130423300031903RhizosphereLNETLLWLLYLVSAAVAFLTVQKLDWRIVPSMLAGTVVTIVGWGMIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER
Ga0307407_1043097123300031903RhizospherePRLHAHRRDQVHQAESARVLNETLLWLLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIALAMKSSQSAD
Ga0307407_1097390913300031903RhizosphereLNETLLWLLYLVSAAVAFLAVQKLGWRLVPSMLAGTLVTVLGWLLIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE
Ga0307412_1005191823300031911RhizosphereLNETLLWLLYLVSALIAFLAVQKLGWRIVPSIFAGTAVSVVGWAFLYALAAEENRPEFWRLDLSLNASFALVFAGAGAALAFALKSRDPHN
Ga0307412_1007384623300031911RhizosphereLNETLLWLLYLVSAAVAFFAVQKLGWRIVPSMLAGTVVTMVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAATALAMKSSQSAD
Ga0307412_1231159123300031911RhizosphereLNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRLDLSLNASFALIFAGAGAALAFALKNREAE
Ga0307409_10020762723300031995RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTIVTIIGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER
Ga0307409_10036810123300031995RhizosphereSVHQAEGARILNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKNREAE
Ga0307409_10132752513300031995RhizosphereLNETLLWLLYLVSAAVAFFTVQKLGWRLVPSMLAGTLVTVLGWLVIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE
Ga0307416_10052223123300032002RhizosphereLNETLIWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSER
Ga0307416_10055058713300032002RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGQRIVPSMLVGTLLTVVGWALLYLLTAEDKRPPYWRVDLTLNASFALIFAGAGAALALVMRNREAE
Ga0307414_1016280013300032004RhizosphereETLLWLLYLVSAAVAFFTVQKLAWRFVPSMLAGTLVTVLGWLMIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFAMKSREAE
Ga0307414_1037880723300032004RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTIVTIIGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSNQSER
Ga0307414_1061389523300032004RhizosphereLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAGIAFAMKSSRSEH
Ga0307414_1120890213300032004RhizosphereLNETLFWLLYLVSAVTAFLMVQKLGWRIVPSMLAGTAVTIVGWALIFALTSEDKRPPFWRVDLSLNASFALIFAGAGAALAFALKSREP
Ga0307411_1009407213300032005RhizosphereLNETLLWLLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAG
Ga0307411_1028235323300032005RhizosphereLNETLLWLLYLVSAAVAFFAVQKLGWRIVPSMLAGTVVTMVGWGLIFLLTAEDRRPAFWRLDLSMNASFALIFAGAGAAIALAMKSSQSAD
Ga0307411_1049759413300032005RhizosphereRLHADRRGRVHQAEGARILNETILWLLYLVGAVAAFHAVQRLQWRIVPSMLGGTMVTVAGWAVMYLLTGAEDRPPFWQLDLSLNASFALIFAGAGAALAFALPHLKRR
Ga0307411_1068467623300032005RhizosphereFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSMNASFALIFAGAGAAIAFAMKSNQSER
Ga0310906_1100923523300032013SoilLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFW
Ga0310906_1146936513300032013SoilHQAKGARILNETLLWLLYLVSAVVGFLAVQKLGWRIVPAMLAGTLVTVLGWLPIFLLTAEDKRPAFWRVDLSLNASFALIFAGAGAALAFALKSREAE
Ga0310890_1078177113300032075SoilLNETWLWLAYLASAVAAFLLVVKLGWRIVSSMLAGAFVSLVAWGLLYLFTAEDLRPSFWRVDLSLSMSFAVIFAGAGAAIGFATRGRKA
Ga0310890_1108537913300032075SoilLNETLLWLLYLVSAVVGFIAVQKLGWRLVPSMLAGTFVTVLGWLPIYLLTAEDKRPDFWRLDLSLNASFALIFAGAGAALAFALKGREAE
Ga0307415_10016754823300032126RhizosphereLNETLLWLLYLASAVVAFLAVHRFGTRIVPAMIIGTLVTGFGWIPLYFLTSEELRPDFWRVDFSLNVCFGLIFAGAGAAIAFFMATRREGVVRRNEGSD
Ga0307415_10044239623300032126RhizosphereLNETLLWLLYLVSAAVAFLAVHKLGWRIVPSMLAGTIVTMVGWGLIFLLTAEDERPAFWRLDLSMNASFALIFA
Ga0307415_10050578333300032126RhizosphereRHQVHQAEGARVLNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAGIAFAMKSSRSEH
Ga0307415_10168036613300032126RhizosphereLNETILWLLYLVGAVAAFQAVQRLQWRIVPAMLGGTMITVAGWAVMYLLTGAEDRPPFWQLDLSLNASFALIFAGAG
Ga0315910_1084726113300032144SoilETVLWLLYLVSAVTAFLTVQKLGWRIVPSMLAGTAVTVVGWGMIFLLTAEEKRPPFWRVDLSLNASFALIFAGAGAALAFALKDRGRSD
Ga0310810_1021524413300033412SoilLNETLLWLLYMVSAAVAFLTVQKLGWRIVPSMLAGTVVTIVGWGLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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