Sample 3300010227

3300010227: Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2

Overview

Basic Information
IMG/M Taxon OID	3300010227 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121424 \| Gp0154113 \| Ga0136219
Sample Name	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2
Sequencing Status	Permanent Draft
Sequencing Center	Fidelity Systems Inc
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	83436105
Sequencing Scaffolds	58
Novel Protein Genes	62
Associated Families	62

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	5
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4
All Organisms → cellular organisms → Bacteria	15
All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6
All Organisms → cellular organisms → Bacteria → Proteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group	1
Not Available	4

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil Microbial Communities From Bangor Area, North Wales, Uk Enriched With Cashew Seed Oil
Type	Engineered
Taxonomy	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil → Soil Microbial Communities From Bangor Area, North Wales, Uk Enriched With Cashew Seed Oil

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Bangor area, North Wales, UK
Coordinates	Lat. (^o)	53.24	Long. (^o)	-4.01	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001203	Metagenome / Metatranscriptome	748	Y
F001677	Metagenome / Metatranscriptome	654	Y
F001752	Metagenome / Metatranscriptome	642	Y
F002173	Metagenome / Metatranscriptome	587	Y
F002509	Metagenome / Metatranscriptome	553	Y
F002755	Metagenome / Metatranscriptome	532	Y
F003244	Metagenome / Metatranscriptome	498	Y
F003843	Metagenome / Metatranscriptome	466	Y
F004033	Metagenome / Metatranscriptome	456	Y
F004340	Metagenome / Metatranscriptome	443	Y
F006205	Metagenome / Metatranscriptome	379	Y
F006903	Metagenome / Metatranscriptome	362	Y
F011357	Metagenome	292	Y
F012052	Metagenome	284	Y
F012792	Metagenome / Metatranscriptome	277	Y
F014426	Metagenome / Metatranscriptome	263	Y
F015501	Metagenome / Metatranscriptome	254	Y
F016712	Metagenome	245	Y
F017823	Metagenome / Metatranscriptome	238	Y
F019257	Metagenome / Metatranscriptome	231	Y
F019547	Metagenome	229	Y
F020047	Metagenome	226	Y
F021889	Metagenome	217	Y
F022316	Metagenome / Metatranscriptome	215	Y
F025113	Metagenome / Metatranscriptome	203	Y
F026847	Metagenome / Metatranscriptome	196	Y
F027649	Metagenome / Metatranscriptome	194	Y
F031583	Metagenome / Metatranscriptome	182	Y
F032029	Metagenome / Metatranscriptome	181	Y
F032736	Metagenome / Metatranscriptome	179	Y
F033159	Metagenome / Metatranscriptome	178	Y
F033476	Metagenome	177	Y
F037503	Metagenome / Metatranscriptome	168	Y
F041056	Metagenome	160	Y
F042494	Metagenome / Metatranscriptome	158	Y
F042524	Metagenome	158	Y
F047855	Metagenome / Metatranscriptome	149	Y
F048506	Metagenome	148	Y
F048670	Metagenome	148	Y
F049308	Metagenome	147	Y
F049311	Metagenome	147	Y
F050786	Metagenome / Metatranscriptome	145	N
F053534	Metagenome	141	Y
F057191	Metagenome / Metatranscriptome	136	Y
F058376	Metagenome	135	Y
F061696	Metagenome	131	Y
F064968	Metagenome / Metatranscriptome	128	Y
F066654	Metagenome / Metatranscriptome	126	Y
F066982	Metagenome / Metatranscriptome	126	Y
F068106	Metagenome / Metatranscriptome	125	Y
F069820	Metagenome / Metatranscriptome	123	Y
F072304	Metagenome / Metatranscriptome	121	Y
F073351	Metagenome / Metatranscriptome	120	N
F075270	Metagenome / Metatranscriptome	119	Y
F078995	Metagenome	116	Y
F080016	Metagenome / Metatranscriptome	115	Y
F080479	Metagenome / Metatranscriptome	115	Y
F086048	Metagenome / Metatranscriptome	111	Y
F090534	Metagenome / Metatranscriptome	108	Y
F095842	Metagenome / Metatranscriptome	105	N
F097870	Metagenome / Metatranscriptome	104	Y
F103636	Metagenome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0136219_1000040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	13465	Open in IMG/M
Ga0136219_1000063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	12302	Open in IMG/M
Ga0136219_1000128	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9443	Open in IMG/M
Ga0136219_1000219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7637	Open in IMG/M
Ga0136219_1000220	All Organisms → cellular organisms → Bacteria	7576	Open in IMG/M
Ga0136219_1000248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7328	Open in IMG/M
Ga0136219_1000345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	6539	Open in IMG/M
Ga0136219_1000349	All Organisms → cellular organisms → Bacteria	6470	Open in IMG/M
Ga0136219_1000390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	6043	Open in IMG/M
Ga0136219_1000586	All Organisms → cellular organisms → Bacteria	5040	Open in IMG/M
Ga0136219_1000829	All Organisms → cellular organisms → Bacteria	4241	Open in IMG/M
Ga0136219_1000830	All Organisms → cellular organisms → Bacteria	4235	Open in IMG/M
Ga0136219_1000860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4149	Open in IMG/M
Ga0136219_1001158	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3548	Open in IMG/M
Ga0136219_1001398	All Organisms → cellular organisms → Bacteria → Proteobacteria	3175	Open in IMG/M
Ga0136219_1001759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	2767	Open in IMG/M
Ga0136219_1002455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2208	Open in IMG/M
Ga0136219_1002571	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
Ga0136219_1002591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	2129	Open in IMG/M
Ga0136219_1002757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2047	Open in IMG/M
Ga0136219_1002893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1971	Open in IMG/M
Ga0136219_1003065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1905	Open in IMG/M
Ga0136219_1004307	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1530	Open in IMG/M
Ga0136219_1004460	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
Ga0136219_1004749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1446	Open in IMG/M
Ga0136219_1005874	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
Ga0136219_1006890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1150	Open in IMG/M
Ga0136219_1007787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1059	Open in IMG/M
Ga0136219_1008323	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
Ga0136219_1008659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
Ga0136219_1010537	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
Ga0136219_1010740	All Organisms → cellular organisms → Bacteria → Proteobacteria	903	Open in IMG/M
Ga0136219_1010745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
Ga0136219_1010825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
Ga0136219_1011219	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
Ga0136219_1011281	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
Ga0136219_1012140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	866	Open in IMG/M
Ga0136219_1012162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	866	Open in IMG/M
Ga0136219_1012901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
Ga0136219_1013058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
Ga0136219_1014331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	821	Open in IMG/M
Ga0136219_1015481	All Organisms → cellular organisms → Bacteria → Terrabacteria group	803	Open in IMG/M
Ga0136219_1016754	Not Available	785	Open in IMG/M
Ga0136219_1016779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
Ga0136219_1018721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	757	Open in IMG/M
Ga0136219_1019129	Not Available	752	Open in IMG/M
Ga0136219_1019184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	752	Open in IMG/M
Ga0136219_1019240	Not Available	751	Open in IMG/M
Ga0136219_1019941	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
Ga0136219_1022339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
Ga0136219_1022572	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
Ga0136219_1024318	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
Ga0136219_1025203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
Ga0136219_1027010	Not Available	612	Open in IMG/M
Ga0136219_1027177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
Ga0136219_1027609	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
Ga0136219_1027882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
Ga0136219_1027941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0136219_1000040	Ga0136219_10000405	F019547	MNFSDLGKLANVFCLFAERNAVMSSRTVQRIQKVLARAGVSTAVFTLALATHADAKPGFNPVIIRGIPSTAPVSNELQLAYLASFPNGSLEPSVDKMNAGPMVPGDPLIPGSNPTISAAPGEVVVSIHRPLGLSPDDIPAESIFAPVNFGPGSIVRLRATFIAPVGPYATTGGFAIGVGARIGGKDDLPLEPRVFVTVNARPNQLVRFQVPFGSVEPTNTVLPQAVKDAIYSTTDPQPFTIELTIDRKLGTGTARLMVIDQVFSLSFTLKDFLADSGPTITNVGPGIAVNSNAPGQTASVHVRDFRIYTTVGN*
Ga0136219_1000063	Ga0136219_10000634	F080479	MARGDPVAGAKGAKMRVALVSVFGVSGALIAAQPASAATIVVFTSPETLERRMIVVDQDGPDRLYLCMLPPGEAGCHQVPVKRRN*
Ga0136219_1000128	Ga0136219_100012813	F048670	MSRISRIAGAVLALAPLSYTGAQTATKNLAMDFRTTVTISGMPDTGVIQGHAIGSGDKMRMDLNLKGPGAQVSPLGGAGGKITMILSDTGKTVTYLDSASSRYLRVRPSDMLAMAQQSGQMTMKFSDTQANVDNLGAGPSILGHPTSHYRVGTGMTMTIAAMGQEQTVKISTTADYYYATDLTGVVNPFATLTGSDMSAMFGGSSKEFADKLKLAQSKLPKATPLRASTKATMIAQGQTRVTNTEAEVTSVQWVAAKPGIFDVPAGYTAIALPGMQGDSGAAIPPK*
Ga0136219_1000219	Ga0136219_10002199	F103636	VTSLSGGSGCVQYYVDDMPWQSATPGDINDFINGREVVGVEVYSGPGVPAQYTQGMQDCTTIVIWTKFKIRD*
Ga0136219_1000220	Ga0136219_10002202	F041056	MVRIFCAAVGLQLLLLGSASAQQAPPLKIRGDTTGAPRGCSAASGISAISAWFRAFTDANSAGLAKASSTPHGRFVFSVGKFATSDTFIRGRTFEDLLAYARDRARQRERMTVQEVRFTGWSGQVLEWDRLYFTRSANDLGDTPLRGVGKGGYWCRQGVWYLHLAPRSDIDPRRR*
Ga0136219_1000248	Ga0136219_10002487	F015501	MQPVYRIYAERNLVSLYWKDFPSLGQLRQVVEDAVADPEFRAGMNFLWDRHPGESSSADVNYLREASYYLQILAEQIGPHAWAIVAHNQADFGKARMMETMSDQTKVTIRAFQSCGDAEEWLRNPVRYEPIVVHFPARNPSLMHPGLA*
Ga0136219_1000345	Ga0136219_10003457	F001203	MRKRDRLVRLLKAIETGKVTHVDEEDLRELQAATPENIAALKQRLAELNDRLSQG*
Ga0136219_1000349	Ga0136219_100034910	F006205	MDDMKQTLDKLREELTNAGKRLAELAQKAEAELPEAGKRINEEYLRLQALLDSAVDKLRHK*
Ga0136219_1000349	Ga0136219_100034912	F042524	KALLGLLIVVAALLLFGSFSFMRPVDAPKAWAAADRELQGGMLQYDEKVEQKTRVFVRRATDYYRSANGILYATNHRLIFIGVAPGSKLENEDAPPVIVTQEFKNDTLLDXXXXXX
Ga0136219_1000390	Ga0136219_10003908	F020047	MSLLLRKLRGASTSAAIALALCASPALAQKTNVTVSGGTVTFPSPTAADYVAGYVTAVAGVTFNINSQNGVPRTTTVSIRSTSGSMGGGKVIGDLEWRRSDLATWNAVTLTDAQIEQRLVINKGLNDPWSNTIFFRLKLNWTTDAPGTYTANYQITVAQTVP*
Ga0136219_1000586	Ga0136219_10005861	F003843	ECNPSIPKMKLSVLLALGLVSAPIQAQDSTGMHVSVHVPDSVAHIVDRESASHSRFTIVSRDGQAQLLLMDTTIVAQLTDRGLARMDSREANRIFARMAIGALIPLFDHGIAYHLRDLADARYADGRLQLLRANGDEVFRDVEIGKGPLMESFSPADAMAFARRAREARARLR*
Ga0136219_1000829	Ga0136219_10008297	F048506	XXXXTPQRQIFRLRLGQHRVETTPLPDDVWPSYQDVLISPDGRFVAYVAEDSTPANPGTYAVVRDIKSGRMVVRGPGGGGCDCDEDFNHARWFPPDSFEIAVAHRNTTGTWERFSGKASVARVHVDTLTDEPDWH*
Ga0136219_1000830	Ga0136219_10008304	F003244	VKWKSRRDRDGKIGDERVRTKFAWTPVEADDGYTYWLTPVVVREQLLPKVSRGGFEDDEQDWEVVEAKPVNGKSRR*
Ga0136219_1000860	Ga0136219_10008602	F049311	MRRHFRTTAFAASILIAPAAIAQSPSTVSQPSQLVGTWEAITRSAGGLGATIGFGADNRLRYTLGAMVDMKYRRTRDSLYIVDPEGPVSPFRVAFIGDTMVMTNEGKVQRETRVTPAVAGADPVIGKWTYAHYTGVPAFEEYTAAGDFRLRVPIRTLEGNWTSAGDSAMLHLLGPGGGDRAVHFAVVADTLILAFDGKSTRYLRTGTSGR*
Ga0136219_1001158	Ga0136219_10011584	F066982	MIYTGYAMDPQTFEASPIEEMDPIECPACHQIHRWTKRDARFERDPNE*
Ga0136219_1001158	Ga0136219_10011585	F049308	VKKYCNFCGEPMQADQKECKQCGWDISHNGPPSTDPGDNKARVGVALGLIVAYGVMWFLVQGAPVSARADEAPRPEPVAATEYDYQPVSEPATAIGTPSPAVATVAPSPAKPSALINIKIADSRSSTIGPRDALQYTFELPETDQKCRLVGSTKGVGGFGRNIEVFLLTDDEYVFWHANPAAIANSSWETFRGSENTLSYDLPGAGVYHFIVSNEMSATPQSIAVKAQVRCAH*
Ga0136219_1001398	Ga0136219_10013983	F027649	MGSSPHPPQKPAAAKKEDANMAYGLNPRLFVENGPAIQAAAAHSRSSSDAFRAWAGLDAEHRLELIEKALREAANDSSELPIAL*
Ga0136219_1001759	Ga0136219_10017595	F033476	MHPYRLFAHDGLGNFNLIQEFSAQNDEAAGKFVARWSARPLELWQSSRKVKCWPTQDLNSLSVET*
Ga0136219_1002455	Ga0136219_10024553	F021889	LIGLIATYAACASLPSSEESPTPAPTAGREATHEEELTLIRADSELFAAVVRAQLDGKDNEYPYHLDRYRFDARPYGTENGYPEVFAGVQGIDPTLSFARAGQSAIDELVDNRKKILDAAAVGEGGPLVYNQCAGAKVPEPPPVRGNRRRTSVHAGCPKQPEYYLTVGLPIRGQPRGLRGARDTKGRRVDLGGDVWTVLVNEFSAAPRGWSKAQYAWLFRRGRWNHQLELSNTILVGVIE
Ga0136219_1002571	Ga0136219_10025711	F001677	MGMSRLTFAASVLLAIPCSVIGQQAAFTASNDTGPTAAAIFETKDAAAVTAGLAPLSRTDLHKGEREVRIWYSAFGNPQYLVIIRQSGAKVSGRLMLWWDQYYESTPASADVRVDNFVRKGYDCGPISKRDSHFGEDRWVSSICEARLKGSPDWKAFLSEVEAHALPQSTAAAADDETDDESFGITVERKSGSIYGVSHYRTALTFGAPEPGRGPKLQDMIGALATSAKREPVVASH*
Ga0136219_1002591	Ga0136219_10025913	F053534	LNETLLWLLYLVSAAVAFLTVQKLGWRIVPSMLAGTVVTILGWVLIFLLTAEDKRPAFWRLDLSLNASFALIFAGAGAAIAFAMKSSRSEH*
Ga0136219_1002757	Ga0136219_10027573	F006903	MEAWYAHSTGKRVVVWTDGARPHPWTVFVAASVHESLEDAVAACAG*
Ga0136219_1002893	Ga0136219_10028932	F032029	MRMPAVALGLFGLLASSATAGVHPPEVEQQLSFIAGDWTIKGLEANYRDHCTWFDSNSFIVCDTSDNRRGNHHSIAILGWSAEEGHYTYQQYDDSGRGRTEPCYANDQKGLTCLGQRQTKDGFVQTRSYIWPTPTGLGIRQEKSANAGAWTNVGQVAYIKR*
Ga0136219_1003065	Ga0136219_10030654	F019257	VRLASRGQRDMDTGPEQISDAEELRMVQRQARAVYVKAIITAAILTSAALVF*
Ga0136219_1004307	Ga0136219_10043072	F011357	MHPRTWRQSWPRAWKRTQFTQPAKIAGCIAISALNVLWRGHGIFRSSPTPLRLALVAVGGYVVTTVAEFLWLVYTGPQFTGFESPTATKVAASDEPSDPLAVELSELPPSELRDETLELAEAMKSFEAGTDREFVNTLAAASTIPVASDAEKDEVLDQQSAVLMEHNLRTWRAYRERFYRPARVFRDELRKRLGIRNLNSEPRIPALDQAVLSGARPITQAANYLAGLARRLR*
Ga0136219_1004460	Ga0136219_10044603	F069820	MTKEKPRHLRWGLPESPTPKHPYRDSMLVYGFFAALVVLLAWVTGGSVLKALEIAAAVWAAATIWSIARWRQRLRREAAAARDDAEDLT*
Ga0136219_1004749	Ga0136219_10047492	F073351	MRKTYLLLAGAGAVLLAACGGDKKTSINDDLKKDLELASSSDGITLANSSATPGQQVVSAIEQTAPAPKQKAPSTTVKRHKPAPKATPQVVEAKAPATVTQPEQNTVAQLPAGHAPVMVSPRPQPVPVSYPSGPSSGGDDGRVSSGSGVGVVLGTILGAVIRGGVVGGDVDNCDPRTEGRHGARPPIMINTRMPLPGRVGGASRIGATTGGMGRVRY*
Ga0136219_1005874	Ga0136219_10058743	F097870	LRQLSEQAAEAYAFFNNNNQTHGVAQAPAGALLLRKLLEEENIPTA*
Ga0136219_1006890	Ga0136219_10068901	F068106	MVLEEISLQRPRCAKRETRMTIMTTIVAVALGLAPIGKDGIVQPVNAKDAHEIGRYSETVDDTGTTHLQGINRRTGEVFHLTVNPFGRVEGSVGSWVVTFQVKETA*
Ga0136219_1007353	Ga0136219_10073531	F004340	LSWDVAMAPRRPLSPRSVEKQAERERSAGLDPADEAAKWLEEHDRAPEPPRPKSASKSKELHRWRQRQQRDR*
Ga0136219_1007787	Ga0136219_10077872	F012792	MATMRLPRPRHGDPLQTTEDLRALAAAILQDDVQTLARTTAYLRRSYRVVFIGYVAMMIFGVAAIVAAFVKGITASSVGEXXXXXXXX
Ga0136219_1008323	Ga0136219_10083231	F078995	XXXXNDLDHPAPFRYLRRRDAPDDAFAARIRAAGEPVYVYFRHDDEPDAPAHAARLQELLREG*
Ga0136219_1008659	Ga0136219_10086591	F072304	MHASIWRFRGDPDELLGSYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFDAFSSNPALRVLRERHGLPEPERIEDFPVHAAFVAGRPTTNVDV*
Ga0136219_1009711	Ga0136219_10097113	F058376	MPTEVEQLRDLAKLYWSGQPIPCPKHPGAMLSGSFVQTTFADHVFLTCPRGKETMTIPQRPRQMEFYPQAV
Ga0136219_1010537	Ga0136219_10105371	F037503	MFLGTASFKGIIEVELLIGLGGFTAYQTLINSECYDIRTGVRLWALRSMAEREITQINS*
Ga0136219_1010740	Ga0136219_10107402	F026847	MAQATLQNQKAIIANQKVITRNQSRILKNQEAMLRNQKRILANQARILKK*
Ga0136219_1010745	Ga0136219_10107452	F061696	VRKGDCFAWGSEMRFRELVADIYLLTIAYNSEAGADLLDSQYTVMDKTIQLAARLASIPSAMIGIPAAITSLNYLKQIVVTKGISYRFAKLVEEIRER*
Ga0136219_1010825	Ga0136219_10108253	F033159	VRLSVVDHGHAPAEATVLAEIREHSGAEPLGVVKTIYYRPELFGRPFSD
Ga0136219_1011219	Ga0136219_10112193	F086048	AMLLTTSLMLAEGLQRRSASRTLERAVGNAAERNGHSRDTQAFTDAVLELLPQSRTDVEHFDGAWR*
Ga0136219_1011281	Ga0136219_10112811	F047855	APGSALDSVNFYAEKAELFASRGNYVRARTLADSAWRLEKRMADDPNQSLYVRRGQYEVLAWLAALLGDRTVALSMLVKAGQSPTIARYPRGVEAVQLSCTTAAVYGFLGDAESMMPFARKCFTSANGYAIAYLNDPEFAWRKNDPRIQEIVAXXXXXXXX
Ga0136219_1012140	Ga0136219_10121402	F002755	MPRRKVVTGFLLAAGSLAGSVLVRRRAARKQEHVDLYSADGSMHSFTDGSPEAGRLLPIAQDLLAAL*
Ga0136219_1012162	Ga0136219_10121621	F050786	MKSAMSAVIHAFALGALLVGGAVWTISQQHPLYANPGKLLRLPAAVVDASQPTEQAFRIGEVLNQYTHDRALAFRIADALVDQAEKEKIDPALFSPKTRRLTRTPAARSARAA*
Ga0136219_1012901	Ga0136219_10129011	F090534	MRRKHLLSLFMLVVGVAMLVAAVSVGVAGSAVKKAGSAEANKGGTLRLNMADADFDFVDPQLAYRTDDWSMIYATSMPLVGXXXXXX
Ga0136219_1013058	Ga0136219_10130582	F017823	XIPPTIVFPIQLQNQATRDMCLKGYPPTASGTSLIPLSLLHQMYP*
Ga0136219_1014331	Ga0136219_10143312	F001752	QAPWRQVYKDSDVRVLFDTASIALQSPGTWTTVTSWDYNRPRILENKKAYTRLVERAYVRCSPVRVKRVRSTVYAGNNQLVRDEGEVDPRDQAHMVWDRPKPRTAGKNAFETVCGILTKRAKGSASASKKAGSAEASNKAAATRKSGAKN*
Ga0136219_1015481	Ga0136219_10154812	F022316	MSVFQLNRRSSHRHTAVTTHVLRQQAGVPYRVEQVVCATCRQLLDERPLRRAAA*
Ga0136219_1016754	Ga0136219_10167541	F014426	XXXXDGCDAKWTVASPKLMKKSMDDHRKQFHPDWVQPEPKPMTPYRLDYSGRARQF*
Ga0136219_1016779	Ga0136219_10167791	F057191	QAVALGGGDRAKTTKAIFGINIRNGIIGNFTINATGDTNLTPITIYKQAGKNLVPVKTLIPSASLIGG*
Ga0136219_1018721	Ga0136219_10187213	F075270	MNDVYRRAVVVFGSVAIVLGFAILVRTAVEGGGTVGFAVGALFIALGAARLYLLRRQSGA
Ga0136219_1019129	Ga0136219_10191292	F080016	MRAGDPPRTRLVLRLIAVERSLRGLLLLAAGTYLLFHLSTDF
Ga0136219_1019184	Ga0136219_10191842	F095842	ESGGFASRQRVLVREPVVEASEAGARTLGVTYWQAVDRVTRGVIRASWTGGGAS*
Ga0136219_1019240	Ga0136219_10192402	F025113	MDETDAVLRRLRRIELLRGAAQPAAVLDELRLLVPEAEAWARAEGDARARAAAQKLRKE
Ga0136219_1019941	Ga0136219_10199412	F066654	MTSNAVTAWPSRDAARDPVLLLPLAVAAGLAVGWLGVHERVTGTRIAADLALSWALMAASLVVLERPRWRQARWLLAATPF
Ga0136219_1022339	Ga0136219_10223391	F031583	REGQAEGLNQPDRDPVAEAWILIGGGLLATIDGRLGGFLGDDLRRVRHERTRWMTGV*
Ga0136219_1022572	Ga0136219_10225721	F032736	GVIDFGRILGALAWDGLYDLEIFSDAELEGSLWREDPRELARKGVEALRRVSA*
Ga0136219_1024318	Ga0136219_10243181	F002173	LMLGKSTPRPQRAHAFADAWSSTQSAKWLEDNYGYGEANMLARPTSSDLLKVLKLTNPRAVQEPNAHIDRHIPRXXXXX
Ga0136219_1025203	Ga0136219_10252032	F064968	XXXXDRLFQLERLHSFNRKFFPDWRRRYFCFERWADLPLAGLAYLHAESLLTPPGPWVRSHDLAAQ*
Ga0136219_1027010	Ga0136219_10270102	F002509	MSTTPDSQRADDQIVTHLSHWLTRQLGNDELRRKVADIDTDELAPGGREAVRELLAELETTAPGERAQLEVLVREAVETLVYGD*
Ga0136219_1027177	Ga0136219_10271772	F042494	MQIDGYVQALRADLARVAAVGDESTARAAELLAMALESSLSRRLLEVLGEAXXXXXXXX
Ga0136219_1027609	Ga0136219_10276091	F012052	MPTQTASEPQTLAQVPFKTLEEVIRQLRSTRNDIIRFGVWNVRNMTDDEFNHTDDRKLLGYFRQDLLETRFLSKGRRIDLIQLWKWFDDQMSGVEPMLIDNQELFLNIQDKDLEKVRKRIEEIQSFL
Ga0136219_1027882	Ga0136219_10278821	F004033	MKKTVLGVLLLLCATVGFAADRPATPELNVPVNGDDWLKLSSSEKLFWSIGYAAGYQDALGKIDVTSGPGTPCATLAVKTERQSSSAGKVTGFELVSGLERFYSVPANTPIPLGSAIRIYLLQQSGKDETTIQELIDTARVLGAQSRR
Ga0136219_1027941	Ga0136219_10279411	F016712	SRILDAKEPWFRGDPEIEVHVHGPSSTDNPRYGEDLSCSGEHAYDYQKVFNQDGAFWEGRVLLFSGEETNRYISNFKDGFHVFFWEDDNEPCILKLDSNSLVSFVNSAASAFSMISIKLIPNAPIKIIAGAFVAALFSNAGEWLLTNDDFLGIAVAQEQAGTAYPGNTHVIMDGTTLNGRATIVYRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300010227: Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences