Metagenome / Metatranscriptome Family F072304

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F072304
Family Type	Metagenome / Metatranscriptome
Number of Sequences	121
Average Sequence Length	94 residues
Representative Sequence	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR
Number of Associated Samples	99
Number of Associated Scaffolds	121

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.12 %
% of genes near scaffold ends (potentially truncated)	30.58 %
% of genes from short scaffolds (< 2000 bps)	83.47 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere (12.397 % of family members)
Environment Ontology (ENVO)	Unclassified (44.628 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.983 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.27% β-sheet: 26.45% Coil/Unstructured: 46.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.58.4.17: SOR-like	d6m35a_	6m35	0.71267
d.58.4.5: PG130-like	d1iuja_	1iuj	0.71219
d.58.4.11: PA3566-like	d2pd1a1	2pd1	0.7059
d.58.4.5: PG130-like	d2zdpa2	2zdp	0.69525
d.261.1.1: Hypothetical protein PH1602	d4dwra1	4dwr	0.69418

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 121 Family Scaffolds
PF01425	Amidase	23.97
PF12840	HTH_20	10.74
PF00248	Aldo_ket_red	4.13
PF07883	Cupin_2	3.31
PF14026	DUF4242	3.31
PF12695	Abhydrolase_5	2.48
PF00440	TetR_N	2.48
PF13191	AAA_16	1.65
PF00196	GerE	1.65
PF09234	DUF1963	1.65
PF03746	LamB_YcsF	1.65
PF08327	AHSA1	1.65
PF13556	HTH_30	0.83
PF00571	CBS	0.83
PF00486	Trans_reg_C	0.83
PF07992	Pyr_redox_2	0.83
PF08818	DUF1801	0.83
PF00664	ABC_membrane	0.83
PF00296	Bac_luciferase	0.83
PF12893	Lumazine_bd_2	0.83
PF07730	HisKA_3	0.83
PF07690	MFS_1	0.83

COG ID	Name	Functional Category	% Frequency in 121 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	23.97
COG1540	5-oxoprolinase subunit A	Amino acid transport and metabolism [E]	1.65
COG3878	Uncharacterized conserved protein YwqG, DUF1963 family	Function unknown [S]	1.65
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.83
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.83
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.83
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.83
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.83
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.83
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.83
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.83

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	76.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61.98 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	51.24 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5.79 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.24 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	4.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.24 %
Smaragdicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus	1.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	51.24 %
Smaragdicoccus niigatensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	1.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.83 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119365091	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300002568\|C688J35102_120651037	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300003321\|soilH1_10336763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1293	Open in IMG/M
3300003324\|soilH2_10054493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1689	Open in IMG/M
3300003998\|Ga0055472_10046419	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300004479\|Ga0062595_101558444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	613	Open in IMG/M
3300005171\|Ga0066677_10239745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1026	Open in IMG/M
3300005171\|Ga0066677_10437916	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005176\|Ga0066679_10950555	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005177\|Ga0066690_11066777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	504	Open in IMG/M
3300005178\|Ga0066688_10469342	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005184\|Ga0066671_10042971	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300005184\|Ga0066671_10135751	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300005187\|Ga0066675_10866745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Smaragdicoccus → Smaragdicoccus niigatensis	683	Open in IMG/M
3300005327\|Ga0070658_10649064	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300005327\|Ga0070658_10747740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	849	Open in IMG/M
3300005329\|Ga0070683_100202431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1885	Open in IMG/M
3300005329\|Ga0070683_100796615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	906	Open in IMG/M
3300005329\|Ga0070683_101426659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	665	Open in IMG/M
3300005332\|Ga0066388_102421568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	952	Open in IMG/M
3300005336\|Ga0070680_100425410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1133	Open in IMG/M
3300005336\|Ga0070680_100535750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1003	Open in IMG/M
3300005339\|Ga0070660_100030153	All Organisms → cellular organisms → Bacteria → Proteobacteria	4067	Open in IMG/M
3300005339\|Ga0070660_101929046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300005339\|Ga0070660_101943374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300005340\|Ga0070689_100587757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	963	Open in IMG/M
3300005343\|Ga0070687_100075334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1824	Open in IMG/M
3300005344\|Ga0070661_100042734	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3308	Open in IMG/M
3300005347\|Ga0070668_100281924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1388	Open in IMG/M
3300005354\|Ga0070675_100184240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1806	Open in IMG/M
3300005356\|Ga0070674_100910854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300005365\|Ga0070688_100098929	All Organisms → cellular organisms → Bacteria	1920	Open in IMG/M
3300005366\|Ga0070659_100180631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1732	Open in IMG/M
3300005366\|Ga0070659_101879947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	537	Open in IMG/M
3300005366\|Ga0070659_101983138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300005367\|Ga0070667_100892222	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300005445\|Ga0070708_100393035	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300005458\|Ga0070681_10159374	All Organisms → cellular organisms → Bacteria	2180	Open in IMG/M
3300005468\|Ga0070707_101638573	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005471\|Ga0070698_100784549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	896	Open in IMG/M
3300005530\|Ga0070679_100044303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4432	Open in IMG/M
3300005563\|Ga0068855_101309726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	749	Open in IMG/M
3300005614\|Ga0068856_100454728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1301	Open in IMG/M
3300005764\|Ga0066903_101379554	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300005764\|Ga0066903_104192251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300005843\|Ga0068860_100219904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1844	Open in IMG/M
3300006581\|Ga0074048_12617288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	557	Open in IMG/M
3300006755\|Ga0079222_10807094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300006806\|Ga0079220_10787846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300006954\|Ga0079219_12342564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300009012\|Ga0066710_101218850	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300009012\|Ga0066710_104133941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300009090\|Ga0099827_10724119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300009137\|Ga0066709_100093666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3647	Open in IMG/M
3300009148\|Ga0105243_10022769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4763	Open in IMG/M
3300009177\|Ga0105248_10073129	All Organisms → cellular organisms → Bacteria	3853	Open in IMG/M
3300009545\|Ga0105237_11660711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300009551\|Ga0105238_12488687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300009553\|Ga0105249_10132319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2382	Open in IMG/M
3300010227\|Ga0136219_1008659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300010366\|Ga0126379_13402128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300010396\|Ga0134126_11304827	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300011003\|Ga0138514_100011326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1462	Open in IMG/M
3300012207\|Ga0137381_11076931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300012923\|Ga0137359_10778291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	830	Open in IMG/M
3300012971\|Ga0126369_13379043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300012984\|Ga0164309_10255067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1239	Open in IMG/M
3300012985\|Ga0164308_10128503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1834	Open in IMG/M
3300012988\|Ga0164306_11125612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300013102\|Ga0157371_10214335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1382	Open in IMG/M
3300013104\|Ga0157370_10069820	All Organisms → cellular organisms → Bacteria	3317	Open in IMG/M
3300013308\|Ga0157375_11353782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300014325\|Ga0163163_10419021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1398	Open in IMG/M
3300014325\|Ga0163163_10964763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300014325\|Ga0163163_11743181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300014497\|Ga0182008_10337016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300014745\|Ga0157377_10175586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1343	Open in IMG/M
3300015371\|Ga0132258_11473693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1719	Open in IMG/M
3300015371\|Ga0132258_13640513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1053	Open in IMG/M
3300015372\|Ga0132256_102995064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300015374\|Ga0132255_100784206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1420	Open in IMG/M
3300017792\|Ga0163161_10215063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1486	Open in IMG/M
3300017959\|Ga0187779_10001375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15187	Open in IMG/M
3300017961\|Ga0187778_10063488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2261	Open in IMG/M
3300018032\|Ga0187788_10017165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2281	Open in IMG/M
3300018064\|Ga0187773_10495301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300018431\|Ga0066655_10253592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M
3300018433\|Ga0066667_10042748	All Organisms → cellular organisms → Bacteria	2667	Open in IMG/M
3300018482\|Ga0066669_11026041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300020081\|Ga0206354_10703532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300020081\|Ga0206354_11665534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300020610\|Ga0154015_1500629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300025909\|Ga0207705_10372200	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300025911\|Ga0207654_10329532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1046	Open in IMG/M
3300025912\|Ga0207707_10020398	All Organisms → cellular organisms → Bacteria	5788	Open in IMG/M
3300025912\|Ga0207707_10108142	All Organisms → cellular organisms → Bacteria	2431	Open in IMG/M
3300025912\|Ga0207707_10227132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1624	Open in IMG/M
3300025918\|Ga0207662_10296963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1073	Open in IMG/M
3300025919\|Ga0207657_10013931	All Organisms → cellular organisms → Bacteria	7866	Open in IMG/M
3300025919\|Ga0207657_10241815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1441	Open in IMG/M
3300025919\|Ga0207657_11073584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300025919\|Ga0207657_11092122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300025920\|Ga0207649_10425776	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300025921\|Ga0207652_10563490	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300025931\|Ga0207644_11358465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300025937\|Ga0207669_11266165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300025938\|Ga0207704_10526077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300025940\|Ga0207691_10060121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3454	Open in IMG/M
3300025941\|Ga0207711_11651087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300025949\|Ga0207667_10039080	All Organisms → cellular organisms → Bacteria	5059	Open in IMG/M
3300025961\|Ga0207712_10735882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300026078\|Ga0207702_11106931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300026089\|Ga0207648_10559099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1051	Open in IMG/M
3300026550\|Ga0209474_10321628	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300026552\|Ga0209577_10833333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300028379\|Ga0268266_10592336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1065	Open in IMG/M
3300028589\|Ga0247818_10853075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300028802\|Ga0307503_10280494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	827	Open in IMG/M
3300028809\|Ga0247824_10995462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300028878\|Ga0307278_10014288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3694	Open in IMG/M
3300032013\|Ga0310906_10349017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	962	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.02%
Host-Associated	Host-Associated	42.15%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.20%
Plants	Host-Associated → Plants	42.15%
Aquatic	Environmental → Aquatic	0.83%
Lab Enrichment	Engineered → Lab Enrichment	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.09%
Roots	Host-Associated → Plants → Roots	2.48%
Marine	Environmental → Aquatic → Marine	0.83%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.83%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.41%
Loam	Environmental → Terrestrial → Soil → Loam	20.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	19.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.61%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.48%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.48%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.83%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	19.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.48%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.48%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.83%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.83%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.83%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	12.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.31%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.65%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.83%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.83%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010227	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2	Engineered	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1193650911	3300002568	Soil	MHASIWKFAGDPDALLRAYDSMVAEIPRSSLSLQLCLRAPDGIVLVDTCPTKEVFDGFARGDAFRALRERHGLPEPQRLEDFPVHAALVNGRPPAS*
C688J35102_1206510372	3300002568	Soil	MHASILKFSGDPDDLLRRYDAMLAEASPTAMRLHLCMRVPDGILLVDTCPTREAAEAFVTGPFRDLCARHGMPEPEQPEQFPVHVAVVEGQPVG*
soilH1_103367633	3300003321	Sugarcane Root And Bulk Soil	MHASIWRFSGDPDELLRAYDAMVAEIPSANMKLHLCLRAPDGIIVVDTCPTEEAFHAFAEGRAALARFGLPEPEIDDFPVHVAFVAGQPATNAGG*
soilH2_100544933	3300003324	Sugarcane Root And Bulk Soil	MHASIWRFRGDPDELLRAYDAMVAEIPSANMKLHLCLRAPDGIIVVDTCPTEEAFHAFAEGRAALARFGLPEPEIDDFPVHVAFVAGEPATNAGG*
Ga0055472_100464192	3300003998	Natural And Restored Wetlands	MHASIWKFTGDPDELLRRYEAMLADIPAGDMRLHLCLRAPDGIVLVDTCPTPEVFRDFSSGPFPALRARHGLTDPAALDDFPVHVAFVDGNRVAG*
Ga0062595_1015584442	3300004479	Soil	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTRETFESFSNGAFATLRQRHGLPEPERVEDYPVHAAF
Ga0066677_102397452	3300005171	Soil	SIWRFRGDPDELLDRYDAMVAEIPRENMRLHLCLRDEDGIVMVDTCPTREAFVSFAGGEAFRALRERHGLPEPEQLEDFPVHRVFVSA*
Ga0066677_104379161	3300005171	Soil	MHASVWRFADDPDDLLRRYDAMRAEIPAANMRLQLCLRAPDGILLVDTCPTREIFEAFAGGDAFHSLRRRHGLPDPVQLDDFPVHVAIVHGRPAV*
Ga0066679_109505551	3300005176	Soil	MHASIWRFRGDPDELLDRYDAMVAEIPRENMRLHLCLRDEDGIVMVDTCPTRAAFVSFAGGEAFRALRERHGLPEPEQLEDFPVHRVFVSA*
Ga0066690_110667771	3300005177	Soil	MHASIWRFAGDPDDLLRRYDAMRAEIPAANMRLQLCLRAPDGILLVDTCPTREIFEAFAGGDAFHSLRRRHGLPDPVQLDDFPVHVAIVHGRPAV*
Ga0066688_104693421	3300005178	Soil	MHASIWRFRGDPDELLDRYDAMVAEIPRENMRLHLCLRDEKGIVMVDTCPTREAFVSFAGGEPFRALRERHGLPEPEQLEDFPVHRVFVSA*
Ga0066671_100429712	3300005184	Soil	MHASIWRFRGDPDELLDRYDAMVAEIPRENMRLHLCLRDEDGIVMVDTCPTREAFVSFAGGEAFRALRERHGLPEPEQLEDFPVHRVFVSA*
Ga0066671_101357513	3300005184	Soil	MHASIWRFAGDPDDLLRRYDAMRAEIPAANMRLQLCLRAPDGILLVDTCPTREIFEAFAGGDAFHSLRRRHGLPDPVQLDDSPV
Ga0066675_108667451	3300005187	Soil	ALRANPLREALTMHASIWRFAGDPDDLLRRYDAMRAEIPAANMRLQLCLRAPDGILLVDTCPTREIFEAFAGGDAFHSLRRRHGLPDPVQLDDFPVHVAIVHGRPAV*
Ga0070658_106490642	3300005327	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTREAFDAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTANVDV*
Ga0070658_107477402	3300005327	Corn Rhizosphere	MHASIWRFRGDPDQLVRSYDAMMAEVPQANMKLHLCLRAPDGIVLVDTCPTADVFAAFVADPGFHALRERHGLPEPDRVDDFPVHAAYVAGLRQ*
Ga0070683_1002024313	3300005329	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRALRERHGLPEPERIEDFPVHVAFVAGRPTTNVDV*
Ga0070683_1007966152	3300005329	Corn Rhizosphere	VNLHASIWTFRGDPDQLLRSYDAMVAEVPRANFKLHLCLRAPDGIILVDTCPTKEAFDGFVADPSVRALRERHGLPEPESLDDYPVHVAYT*
Ga0070683_1014266592	3300005329	Corn Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0066388_1024215683	3300005332	Tropical Forest Soil	THRPADRVHASIWRFVGDPDELLRRYEAMVAEIPAENMRLHLCLRAEDGIVLVDTCPTKEVFDAFFAGEGFRTLRERHGFPEPATLEDHPVHAAFVEGRRL*
Ga0070680_1004254103	3300005336	Corn Rhizosphere	LMHASIWKFSGDPDELLRGYDAMVAEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNPDG*
Ga0070680_1005357502	3300005336	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTANVDV*
Ga0070660_1000301537	3300005339	Corn Rhizosphere	MHASIWKFRGDPDQLVRSYDAMMAEIPQANMKLHLCLRAPDGIVLVDTCPTAEVFAAFVADPGFHALRERHGLPEPERVDDFPVHAAYVAGLRQ*
Ga0070660_1019290462	3300005339	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVAEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNAGG*
Ga0070660_1019433741	3300005339	Corn Rhizosphere	QPRCGAGGVNLHASIWTFRGDPDQLLRSYDAMVAEVPRANFKLHLCLRAPDGIILVDTCPTKEAFDGFVADPSVRALRERHGLPEPESLDDYPVHVAYT*
Ga0070689_1005877572	3300005340	Switchgrass Rhizosphere	FRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0070687_1000753341	3300005343	Switchgrass Rhizosphere	PDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTRETFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0070661_1000427346	3300005344	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTREAFDAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTTNVDV*
Ga0070668_1002819242	3300005347	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTRETFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGG
Ga0070675_1001842402	3300005354	Miscanthus Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTRETFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0070674_1009108542	3300005356	Miscanthus Rhizosphere	AALARSAAGGLGRLAAPLMHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0070688_1000989292	3300005365	Switchgrass Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPPRETFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0070659_1001806314	3300005366	Corn Rhizosphere	MHSSIWKFSGDPDELLRGYDAMVAEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNAGG*
Ga0070659_1018799472	3300005366	Corn Rhizosphere	MHASIWRFRGDPDALLRRYDAITVGIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAF
Ga0070659_1019831382	3300005366	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRP
Ga0070667_1008922222	3300005367	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0070708_1003930352	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWWFVGDPVDLLRRYDAMTAEIPGENLRLHLCLGAVDGMVVVDTCPTKEVFEAFVQGDAFRALRERHGLPEPERVEDFPVHRAFIVGREIRQASGSR*
Ga0070681_101593744	3300005458	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVTEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNAGG*
Ga0070707_1016385731	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWWFVGDPVDLLRRYDAMTAEIPGENLRLHLCLGAVDGMVVVDTCPTKEVFEAFVQGDAFRALRERHGLPEPERLEDFP
Ga0070698_1007845491	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWKLRGDPDELLRRYDAMVAEIPSANMKLHLCLRAPDGIVLVDTCPTKEVFDAFVSDEAVRVLRKKHGLPEPEGVDDFPVHAAFVGGQRAATTGS*
Ga0070679_1000443035	3300005530	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVTEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNPGG*
Ga0068855_1013097262	3300005563	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVAEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNPDG*
Ga0068856_1004547283	3300005614	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTTNVDV*
Ga0066903_1013795542	3300005764	Tropical Forest Soil	MHASIWRFVGDPAVLLGAYDAMVAEIPGESMRLHLCLRAPDGIVLVDTCPTRDAFDAFAGGEAFAALRRRHGLPEPERLEDFPVHAAFVDGRRSG*
Ga0066903_1041922513	3300005764	Tropical Forest Soil	VGDPDELLRRYEAMVAEIPAENMRLHLCLRAEDGIVLVDTCPTKEVFDAFFAGEGFRTLRERHGFPEPATLEDHPVHAAFVEGRRL*
Ga0068860_1002199042	3300005843	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVGIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0074048_126172881	3300006581	Soil	MHASIWTFRGDPDALLHGYDSMTAEIPAAAMQAHLCLRAHDGIVIVDTCPTREAFESFSNGAFATLRQRH
Ga0079222_108070942	3300006755	Agricultural Soil	MHASIWRFGGDPDDLLQRYDAMVSEIPSESMRLHLCLRAPAGIVIVDTCPTREVFEAFSEGPFRALRERHGLPEPERLEDFEVHRVFVT*
Ga0079220_107878462	3300006806	Agricultural Soil	MHASIWRFGGDPDDLLERYDAMVSEIPSESMRLHLCLRAPAGIVIVDTCPTREVFEAFSEGPFRALRERHGLPEPERLEDFEVQRVFVA*
Ga0079219_123425642	3300006954	Agricultural Soil	SIWRFRGDPNRLVAAYDAMVREIPAANMKLHLCLRAPDGIVIVDTCPTKEAFDTFSANPGVRALRERHGLPEPERIEDFPVHLAFVGGQPTTTASR*
Ga0066710_1012188502	3300009012	Grasslands Soil	VHASIWKFVGDPDELLAGYDAMLADMPREQMRLHLCLRASDGIVLVDTCPTKEDFDNFVAGAVRAQLREHGLPEPEQLEDFPVHLAIVDGAARR
Ga0066710_1041339412	3300009012	Grasslands Soil	MHASIWRFAGHPDDLLRRYDAMLAEIPRANMRLHLCLRAPDGIVLVDTCPTREAFESFAGGVFRALRARHGLPEPEQLKDLPVHAAFVDGVKRAV
Ga0099827_107241192	3300009090	Vadose Zone Soil	MHASIWRFRGDPDQLLRSYDAMVAEIPRANMKLHLCLRAADGIILVDTCPTKEAFEAFIANDAVRMLRDKHGLPEPERIDDFPVHAAFVAGQLATGADS*
Ga0066709_1000936662	3300009137	Grasslands Soil	MHASIWRFSGDPDELLRRYDAMLAEVPAENMKLHLCLRAPDGIVVVDTCLSRDAFEGYAEAFRALRARHGLPDPERLEDFPVHVAFAGGAATR*
Ga0105243_100227694	3300009148	Miscanthus Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGARR*
Ga0105248_100731292	3300009177	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPVRVEDYPVHAAFVGGERR*
Ga0105237_116607111	3300009545	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVTEIPSANMRLPLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNAGG*
Ga0105238_124886871	3300009551	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVTEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLRERHGLPEPQRVDDYPVHLAFVAGQVATNAGG*
Ga0105249_101323191	3300009553	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLAEPER
Ga0136219_10086591	3300010227	Soil	MHASIWRFRGDPDELLGSYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFDAFSSNPALRVLRERHGLPEPERIEDFPVHAAFVAGRPTTNVDV*
Ga0126379_134021282	3300010366	Tropical Forest Soil	VHASIWRFEGGPDELLRRYEAMVAEIPAENMRLHLCLRAEDGIVLVDTCPTKEVFDAFFAGEGFRTLRERHGFPEPATLEDHPVHAAFVEGRRL*
Ga0134126_113048272	3300010396	Terrestrial Soil	MHASIWRFGGDPDDLLQRYDAMVSEIPSESMRLHLCLRAPAGIVIVDTCPTREVFEAFSEGPFRALRERHGLPEPERLEDFEVHRVFVA*
Ga0138514_1000113261	3300011003	Soil	MHASIWRFAGDPDELVAAYDALVAEVPTENMRLQLCLRAADGIVLVDACPTREAFESFAGGQAFQALRERHGLPEPERLEDFPVHRAIVDGTG*
Ga0137381_110769312	3300012207	Vadose Zone Soil	MHASIWRFAGHPDDLLRRYDAMLAELPRANMRLHLCLRAPDGIVLVDTCPTREAFESFAGGVFRALRARHGLPEPEQLEDLPVHAAFVDGVERVV*
Ga0137359_107782912	3300012923	Vadose Zone Soil	MHASIWTFAGEPDELLPRYDAMVAEIPSDNLKLHLCLRGSDGIVLVDTCPTKEVFEAFIHSDDLRALRARHGLPEPQRVDDFPVHLAFVNGAPPVS*
Ga0126369_133790432	3300012971	Tropical Forest Soil	VHASIWRFVGDPDELLRRYEAMVAEIPAENMRLHLCLRAEDGIVLVDTCPTKEVFDAFFAGEGFRTLRERHGFPEPATLEDHPVHAAFVEGRRL*
Ga0164309_102550671	3300012984	Soil	VPGRPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0164308_101285034	3300012985	Soil	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERIEDYPVHAAFVGGERR*
Ga0164306_111256122	3300012988	Soil	MHASIWRYRGHPDELLGSYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFDAFSSNPALRVLRERHGLPEPERIEDFPVHAAFVAGRPTTNVDV*
Ga0157371_102143351	3300013102	Corn Rhizosphere	PAMHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTTNVDV*
Ga0157370_100698203	3300013104	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTREAFDAFSSSAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTANVDV*
Ga0157375_113537822	3300013308	Miscanthus Rhizosphere	MHASIWKFRGDPDALLRSYDAITAEIPAAAMQTHLCLRVPDGIVIVDTCPTREAFESFSTGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0163163_104190212	3300014325	Switchgrass Rhizosphere	MHASIWKFRGDPDALLRSYDAITAEIPAAAMQTHLCLRVPDGIVIVDTCPTREAFESFSTGAFATLRQRHGLSEP*
Ga0163163_109647632	3300014325	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTRETFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0163163_117431811	3300014325	Switchgrass Rhizosphere	IWRFRGDPDQLVRSYDAMMAEVPQANMKLHLCLRAPDGIVLVDTCPTADVFAAFVADPVFHALRERHGLPEPDRVDDFPVHAAYVAGLRQ*
Ga0182008_103370161	3300014497	Rhizosphere	MHASIWRFGGDPDDLLQRYDAMVSEIPSESMRLHLCLRGPAGIVIVDTCPTREVFEAFSEGPFRALRERHGLPEPEHLEDFQVHRVFVA*
Ga0157377_101755862	3300014745	Miscanthus Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTRETFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERS*
Ga0132258_1147369310	3300015371	Arabidopsis Rhizosphere	MHASIWRLRGNADELLRSYDAMVAEIPRANMKLHLCLRAPDGIVLVDTCPTKDVFDAFVANDAVRLLREKHGLPEPERIDDFPVHAAFVAGQLIGE*
Ga0132258_136405132	3300015371	Arabidopsis Rhizosphere	APLMHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR*
Ga0132256_1029950641	3300015372	Arabidopsis Rhizosphere	RGRIVEDDSMHASIWRLRGNADELLRSYDAMVAEIPRANMKLHLCLRAPDGIVLVDTCPTKDVFDAFVANDAVRLLREKHGLPEPERIDDFPVHAAFVAGQLIGE*
Ga0132255_1007842066	3300015374	Arabidopsis Rhizosphere	MHASIWRLRGNADELLRSYDAMVAEIPRANMKLPLCLRAPDGIVLVDTCPTKDVFDAFVANDAVRLLREKHGLPEPERIDDFPVHAAFVAGQLIGE*
Ga0163161_102150632	3300017792	Switchgrass Rhizosphere	MHASIWKFRGDPDALLRRYDAITAEIPAAAMQAHLCLRAHDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGG
Ga0187779_1000137517	3300017959	Tropical Peatland	MHASIWRFTGDPDELARRYDAMLAGVPTENMRLHLCLRAPDGIVLVDSCPYREAFVAFPTDDGFRELRSRQGLPDPEQIEDFPVHVAFMDGKRI
Ga0187778_100634883	3300017961	Tropical Peatland	MHASIWRFTGDPDELARRYDAMLAGVPTENMRLHLCLRAPDGIVLVDTCPYREAFVAFPTDDGFRELRSRQGLPDPEQIEDFPVHVAFMDGKRI
Ga0187788_100171654	3300018032	Tropical Peatland	MHASIWRFAGDPDALLRAFDAMVAEIPAGNMRVHLCLRAPNGIVLVDTCPTKEVFDAFAASEGFRSLRARHGLPEPERLEDFPVHRAFVDGRETPT
Ga0187773_104953012	3300018064	Tropical Peatland	MHASIWRFAGDPDALLRAFDAMVAEIPAGNMRVHLCLRAPDGIVLVDTCPTKKIFDAFAASEGFRSLRARHGLPEPERLEDFPVHRAFVDGRETPT
Ga0066655_102535923	3300018431	Grasslands Soil	MHASIWRFAGDPDDLLRRYDAMRAEIPAANMRLQLCLRAPDGILLVDTCPTREIFEAFAGGDAFHSLRRPHGLPDPVQLDDFPGHVAIVHGRPAV
Ga0066667_100427484	3300018433	Grasslands Soil	MHASIWRFAGDPDDLLRRYDAMRAEIPAANMRLQLCLRAPDGILLVDTCPTREIFEAFAGGDAFHSLRRRHGLPDPVQLDDFPVHVAIVHGRPAV
Ga0066669_110260412	3300018482	Grasslands Soil	MHASIWKFDGDLDDLLARYDAMIAEIPRANMKLHLCLRAPDGIVVVDTCPTREAFEALSEAFRALRQRHGVPDPSELTDHAVHQAFVDGRTR
Ga0206354_107035321	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	ASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTANVDV
Ga0206354_116655342	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWKFSGDPDELLRGYDAMVTEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLRERHGLPEPQRVDDYPVHLAFVAGQVATNAGG
Ga0154015_15006293	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHV
Ga0207705_103722002	3300025909	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTREAFDAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTANVDV
Ga0207654_103295322	3300025911	Corn Rhizosphere	MHASIWKFRGDPDQLVRSYDAMMAEIPQANMKLHLCLRAPDGIVLVDTCPTAEVFAAFVADPGFHALRERHGLPEPERVDDFPVHAAYVAGLRQ
Ga0207707_100203982	3300025912	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVTEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNAGG
Ga0207707_101081424	3300025912	Corn Rhizosphere	VNLHASIWTFRGDPDQLLRSYDAMVAEVPRANFKLHLCLRAPDGIILVDTCPTKEAFDGFVADPSVRALRERHGLPEPESLDDYPVHVAYT
Ga0207707_102271323	3300025912	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTREAFDAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTTNVDV
Ga0207662_102969632	3300025918	Switchgrass Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTRETFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR
Ga0207657_100139313	3300025919	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVAEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNAGG
Ga0207657_102418154	3300025919	Corn Rhizosphere	GRAPWPRCGAGGVNLHASIWTFRGDPDQLLRSYDAMVAEVPRANFKLHLCLRAPDGIILVDTCPTKEAFDGFVADPSVRALRERHGLPEPESLDDYPVHVAYT
Ga0207657_110735841	3300025919	Corn Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVED
Ga0207657_110921222	3300025919	Corn Rhizosphere	SIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTANVDV
Ga0207649_104257762	3300025920	Corn Rhizosphere	MHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTTNVDV
Ga0207652_105634902	3300025921	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVTEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNPDG
Ga0207644_113584652	3300025931	Switchgrass Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDY
Ga0207669_112661651	3300025937	Miscanthus Rhizosphere	ARLHLEVPGRPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR
Ga0207704_105260772	3300025938	Miscanthus Rhizosphere	MHASIWRFRGDPDALLRRYDAITVGIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR
Ga0207691_100601211	3300025940	Miscanthus Rhizosphere	MHASIWRFRGDPDALLLRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVED
Ga0207711_116510872	3300025941	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPVRVEDYPVHAAFVGGERR
Ga0207667_100390805	3300025949	Corn Rhizosphere	MHASIWKFSGDPDELLRGYDAMVAEIPSANMRLHLCLRARDGIVLVDTCPTKEVFDAFVAGDGFRMLREKHGLPEPQRVDDYPVHLAFVAGQVATNPDG
Ga0207712_107358821	3300025961	Switchgrass Rhizosphere	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLP
Ga0207702_111069311	3300026078	Corn Rhizosphere	RLRDCTPMHASIWRFRGDPDELLRGYDAMLAEIPAANMKLHLCLRAPDGIVLVDTCPTQEAFAAFSSNAALRVLRERHGLPEPERIEDFPVHVAFVAGRPTTNVDV
Ga0207648_105590991	3300026089	Miscanthus Rhizosphere	LLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR
Ga0209474_103216282	3300026550	Soil	MHASIWRFRGDPDELLDRYDAMVAEIPRENMRLHLCLRDEDGIVMVDTCPTREAFVSFAGGEAFRALRERHGLPEPEQLEDFPVHRVFVLA
Ga0209577_108333331	3300026552	Soil	AGDPDDLLRRYDAMRAEIRAANMRLQLCLRAPDGILLVDTCPTREIFEAFAGGDAFHSLRRRHGLPDPVQLDDFPVHVAIVHGRPAV
Ga0268266_105923362	3300028379	Switchgrass Rhizosphere	MHASIWKFRGDPDALLRSYDAITAEIPAAAMQTHLCLRVPDGIVIVDTCPTREAFESFSTGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR
Ga0247818_108530752	3300028589	Soil	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR
Ga0307503_102804942	3300028802	Soil	MHASIWKFRGDPDALLRSYDAITAEIPAAAMQTHLCLRVPDGIVIVDTCPTREAFESFSTGAFVRLRQRHGLPEPERVEDYPVHAAFVGGERR
Ga0247824_109954621	3300028809	Soil	MHASIWRFRGDPDALLRRYDAITVEIPAAAMQAHLCLRAPDGIVIVATCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR
Ga0307278_100142884	3300028878	Soil	DPDELLAAYDALVAEVPTENMRLQLCLRAPDGIVLVDTCPTREAFESFAGGQAFRALRERHGLPEPERLEDFPVHRAIVDGTG
Ga0310906_103490172	3300032013	Soil	MHASIWKFRGDPDALLRSYDAITVEIPAAAMQAHLCLRAPDGIVIVDTCPTREAFESFSNGAFATLRQRHGLPEPERVEDYPVHAAFVGGERR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F072304

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences