NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F078995

Metagenome Family F078995

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078995
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 55 residues
Representative Sequence APFRYLRRREAPDAAFAATVAAAQEPVYVYFRHDDEPAAPAHAARLRELLES
Number of Associated Samples 104
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.72 %
% of genes near scaffold ends (potentially truncated) 96.55 %
% of genes from short scaffolds (< 2000 bps) 90.52 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (88.793 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.483 % of family members)
Environment Ontology (ENVO) Unclassified
(26.724 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(38.793 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 27.50%    β-sheet: 12.50%    Coil/Unstructured: 60.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
c.1.32.1: TM1631-liked1ztva11ztv0.7343
d.68.1.0: automated matchesd2m71a12m710.72885
c.26.1.0: automated matchesd3vgja_3vgj0.71472
c.73.1.0: automated matchesd7nloa_7nlo0.71013
c.1.32.1: TM1631-liked1vpqa11vpq0.70236

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF13320DUF4091 28.45
PF00857Isochorismatase 6.03
PF12697Abhydrolase_6 2.59
PF00266Aminotran_5 2.59
PF00561Abhydrolase_1 2.59
PF01904DUF72 1.72
PF01312Bac_export_2 0.86
PF07883Cupin_2 0.86
PF02511Thy1 0.86
PF07690MFS_1 0.86
PF06224HTH_42 0.86
PF00285Citrate_synt 0.86
PF00270DEAD 0.86
PF028262-Hacid_dh_C 0.86
PF12867DinB_2 0.86
PF01872RibD_C 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 6.03
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 6.03
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 1.72
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.86
COG0372Citrate synthaseEnergy production and conversion [C] 0.86
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 0.86
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.86
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 0.86

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.79 %
UnclassifiedrootN/A11.21 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908006|FWIROz_GKA24FP02IF5RSAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
2170459006|GBPF9FW02F7FR3All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300001305|C688J14111_10191311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium634Open in IMG/M
3300001418|JGI20188J14859_1009218All Organisms → cellular organisms → Bacteria → Acidobacteria1251Open in IMG/M
3300002568|C688J35102_120004713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium843Open in IMG/M
3300003324|soilH2_10068965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1958Open in IMG/M
3300004114|Ga0062593_102529061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium582Open in IMG/M
3300005184|Ga0066671_10777602All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005337|Ga0070682_100542658All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium908Open in IMG/M
3300005344|Ga0070661_101758640Not Available526Open in IMG/M
3300005435|Ga0070714_100420545Not Available1266Open in IMG/M
3300005435|Ga0070714_101217033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium735Open in IMG/M
3300005436|Ga0070713_101997927All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300005436|Ga0070713_102221035All Organisms → cellular organisms → Bacteria → Terrabacteria group531Open in IMG/M
3300005454|Ga0066687_10757943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium578Open in IMG/M
3300005458|Ga0070681_11138146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium702Open in IMG/M
3300005468|Ga0070707_101154172All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300005468|Ga0070707_101800426All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300005526|Ga0073909_10318164All Organisms → cellular organisms → Bacteria712Open in IMG/M
3300005549|Ga0070704_100130872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1944Open in IMG/M
3300005549|Ga0070704_100584965All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300005564|Ga0070664_100136803All Organisms → cellular organisms → Bacteria2155Open in IMG/M
3300005569|Ga0066705_10891793All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300005576|Ga0066708_10049508All Organisms → cellular organisms → Bacteria2346Open in IMG/M
3300005616|Ga0068852_102722532All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300005874|Ga0075288_1087554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300005885|Ga0075284_1039284All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300005893|Ga0075278_1033303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium741Open in IMG/M
3300005893|Ga0075278_1038430All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300005894|Ga0075270_1001411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2479Open in IMG/M
3300006046|Ga0066652_100226703All Organisms → cellular organisms → Bacteria1623Open in IMG/M
3300006175|Ga0070712_101947063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300006755|Ga0079222_12258104Not Available542Open in IMG/M
3300006797|Ga0066659_11137352All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300006804|Ga0079221_11430344All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300006881|Ga0068865_101484232All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium607Open in IMG/M
3300006914|Ga0075436_100806678Not Available699Open in IMG/M
3300006954|Ga0079219_11434566All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300009545|Ga0105237_12331074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium545Open in IMG/M
3300009551|Ga0105238_10141770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2380Open in IMG/M
3300009698|Ga0116216_10264520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1049Open in IMG/M
3300010227|Ga0136219_1008323All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300010333|Ga0134080_10309980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium710Open in IMG/M
3300010360|Ga0126372_10454719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1188Open in IMG/M
3300010373|Ga0134128_11390802Not Available773Open in IMG/M
3300010396|Ga0134126_11050147All Organisms → cellular organisms → Bacteria → Terrabacteria group911Open in IMG/M
3300010396|Ga0134126_11867676All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium658Open in IMG/M
3300010398|Ga0126383_11636069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria733Open in IMG/M
3300012200|Ga0137382_10408378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium958Open in IMG/M
3300012202|Ga0137363_10485400All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1037Open in IMG/M
3300012205|Ga0137362_11520567Not Available556Open in IMG/M
3300012210|Ga0137378_10433333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1218Open in IMG/M
3300012212|Ga0150985_106183023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium576Open in IMG/M
3300012356|Ga0137371_10213151Not Available1511Open in IMG/M
3300012356|Ga0137371_10690117All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium781Open in IMG/M
3300012469|Ga0150984_107231771All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300012469|Ga0150984_117450877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1079Open in IMG/M
3300012899|Ga0157299_10103505All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium740Open in IMG/M
3300012901|Ga0157288_10388224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300012971|Ga0126369_12669225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium584Open in IMG/M
3300012985|Ga0164308_10004770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7084Open in IMG/M
3300012986|Ga0164304_11202747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300012987|Ga0164307_11319328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300012989|Ga0164305_11415514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium613Open in IMG/M
3300013307|Ga0157372_10562274All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1329Open in IMG/M
3300014827|Ga0120171_1032207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1814Open in IMG/M
3300015195|Ga0167658_1007321All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium3608Open in IMG/M
3300015242|Ga0137412_10397626All Organisms → cellular organisms → Bacteria → Proteobacteria1067Open in IMG/M
3300015356|Ga0134073_10158643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria721Open in IMG/M
3300015371|Ga0132258_10642539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2668Open in IMG/M
3300015374|Ga0132255_102951887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria726Open in IMG/M
3300017993|Ga0187823_10348491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300017994|Ga0187822_10216076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium645Open in IMG/M
3300018431|Ga0066655_11156906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium545Open in IMG/M
3300018433|Ga0066667_10770658All Organisms → cellular organisms → Bacteria → Nitrospirae814Open in IMG/M
3300020010|Ga0193749_1065265All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium685Open in IMG/M
3300021445|Ga0182009_10372547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium733Open in IMG/M
3300021560|Ga0126371_11042040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium959Open in IMG/M
3300024249|Ga0247676_1072754All Organisms → cellular organisms → Bacteria → Terrabacteria group567Open in IMG/M
3300024288|Ga0179589_10628988Not Available504Open in IMG/M
3300025627|Ga0208220_1141959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300025903|Ga0207680_10081194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2038Open in IMG/M
3300025909|Ga0207705_10252666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1345Open in IMG/M
3300025909|Ga0207705_10493136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium951Open in IMG/M
3300025912|Ga0207707_10232655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1603Open in IMG/M
3300025927|Ga0207687_11384310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium605Open in IMG/M
3300025928|Ga0207700_11077952All Organisms → cellular organisms → Bacteria → Terrabacteria group718Open in IMG/M
3300025928|Ga0207700_11248560All Organisms → cellular organisms → Bacteria → Terrabacteria group663Open in IMG/M
3300025928|Ga0207700_11841085Not Available531Open in IMG/M
3300025931|Ga0207644_10655022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium874Open in IMG/M
3300025945|Ga0207679_10774643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium874Open in IMG/M
3300025990|Ga0208527_1010595All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300026088|Ga0207641_11857776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300026142|Ga0207698_11068134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300026548|Ga0209161_10251078All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium920Open in IMG/M
3300027765|Ga0209073_10191323Not Available774Open in IMG/M
3300028720|Ga0307317_10267187Not Available578Open in IMG/M
3300028721|Ga0307315_10061124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1064Open in IMG/M
3300028881|Ga0307277_10217060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium840Open in IMG/M
3300031170|Ga0307498_10004089All Organisms → cellular organisms → Bacteria2486Open in IMG/M
(restricted) 3300031248|Ga0255312_1067854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium858Open in IMG/M
3300031713|Ga0318496_10619784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria598Open in IMG/M
3300031720|Ga0307469_10955591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium797Open in IMG/M
3300031753|Ga0307477_10007276All Organisms → cellular organisms → Bacteria7744Open in IMG/M
3300031754|Ga0307475_10252629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1413Open in IMG/M
3300031771|Ga0318546_10552955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium809Open in IMG/M
3300031893|Ga0318536_10141073All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1223Open in IMG/M
3300031996|Ga0308176_12615574Not Available537Open in IMG/M
3300032066|Ga0318514_10203038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1039Open in IMG/M
3300032074|Ga0308173_11012508All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium772Open in IMG/M
3300032074|Ga0308173_12028312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300032783|Ga0335079_12354894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium504Open in IMG/M
3300032898|Ga0335072_11083323Not Available725Open in IMG/M
3300032955|Ga0335076_10124978All Organisms → cellular organisms → Bacteria2494Open in IMG/M
3300033289|Ga0310914_10689528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria917Open in IMG/M
3300033803|Ga0314862_0065140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium806Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.62%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.17%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil5.17%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere4.31%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.45%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.45%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.59%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.59%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.59%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.59%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.72%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.72%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.72%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.72%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.72%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.72%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.86%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.86%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.86%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.86%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.86%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.86%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.86%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.86%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.86%
SoilEngineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil0.86%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908006Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2EnvironmentalOpen in IMG/M
2170459006Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cmEnvironmentalOpen in IMG/M
3300001305Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001418Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003324Sugarcane bulk soil Sample H2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005874Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404EnvironmentalOpen in IMG/M
3300005885Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401EnvironmentalOpen in IMG/M
3300005893Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202EnvironmentalOpen in IMG/M
3300005894Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_203EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010227Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2EngineeredOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024249Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025627Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025990Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033803Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
FWIROz_089349202124908006SoilSEAGAVRVGDLEHPAPFRLLRRREAPDAAFAAAVAAAKEPVYVYFRHENEPTAPAYAERLRELLA
L01_048689402170459006Grass SoilNDLDHPAPFRYLRRREPPDEEFAQRIRATTEPVYVYFRHEDDPTAPAYAQQLLELLS
C688J14111_1019131113300001305SoilVGDLDHPAPFRYLRRREAPDEAFAAVVAASEEPVYVYFRHDDEPDAPAHAARLRALLESR
JGI20188J14859_100921813300001418Arctic Peat SoilYLRRREAPDEAFAARIRAASEPVYVYFRHEDEPTAPAYAQQLVERLS*
C688J35102_12000471323300002568SoilRVGDLTSPAPFRYLRRREAPDESFAATIAASAEPVYVYFRHGDAPEAPAYAEQLRELLA*
soilH2_1006896513300003324Sugarcane Root And Bulk SoilAEAGAVRVGDLDHPGSFRYLRRREAPDEAFAAAVAAAREPVYVYFRHEDEPIAPAHASRLLELLPQL*
Ga0062593_10252906113300004114SoilHPAPFRYLRRREAPDDAFAAAVAAVKERVYVYFRHDDEPAAPTHAERLIELLGVR*
Ga0066671_1077760213300005184SoilAPFRYLRRREAPDAAFAAAVAAAREPVYVYFRHDDEPTAPAHASRLRELLASA*
Ga0070682_10054265823300005337Corn RhizosphereDLATTAPFRYLRRREPPDEAFAGSIRAVAEPVYVYFRHDEEPDAPAHADRLRALLAEP*
Ga0070661_10175864023300005344Corn RhizosphereAPFRYLRRREAPDAVFAARVAAASEPVYVYFRHDEEPHAPAHAAALRALLSER*
Ga0070714_10042054523300005435Agricultural SoilNDLDHPASFRYLRRREAPDEEFAARIRATAEPVYVYFRHDDEPDAPRHALSLIELL*
Ga0070714_10121703313300005435Agricultural SoilRFLRRREAPDEEFAALVRGLTEPAYVYFRHDEEPAAPAHALRLLELLSSPS*
Ga0070713_10199792713300005436Corn, Switchgrass And Miscanthus RhizosphereDHPAPFRYLRRREAPDAAFAAAVAAVEEPVYVYFRHDDEPTAPAHAARLHELLET*
Ga0070713_10222103513300005436Corn, Switchgrass And Miscanthus RhizosphereDHPAPFRYLRRREAPDAAFAAAVAAVEEPVYVYFRHDDEPAAPAHAAQLHELLET*
Ga0066687_1075794323300005454SoilYLRRREAPDAAFAAAVAAAREPVYVYFRHDEEPKAPAHASRLRELLAA*
Ga0070681_1113814613300005458Corn RhizosphereAPFRYLRRREAPDDAFVARVHALAEPAYVYFRHGDEPDAPRYAEALLSGS*
Ga0070707_10115417213300005468Corn, Switchgrass And Miscanthus RhizosphereGVVRVDDVEHPAPFRYLRRREAPDAAFAAMVAALREPVYVYFRHEDEPTAPAYAAQLLELV*
Ga0070707_10180042623300005468Corn, Switchgrass And Miscanthus RhizosphereDHPAPFRYLRRRDAPDADYAARLRALEEPAYVYFRHEDEPTAPAYAARLREMLSEA*
Ga0073909_1031816413300005526Surface SoilPAPFRYLRRREAPDAAFAAMVAALREPVYVYFRHEDEPTAPAYAAQLLELV*
Ga0070704_10013087213300005549Corn, Switchgrass And Miscanthus RhizosphereVEHPAPFRYLRRREAPDAAFAAMVAALREPVYVYFRHEDEPTAPAYAAQLLELV*
Ga0070704_10058496513300005549Corn, Switchgrass And Miscanthus RhizosphereRVGDLDHPARFRYLRRRDAPDEAFAAAVAGAKEPVYVYFRHDDAPAAPAHASQLRELLRGGN*
Ga0070664_10013680333300005564Corn RhizosphereGDLDHPAPFRYLRRREAPDEAFAAVVAGGKEPVYVYFRHDDEPAAPAHALQLRELLRGGN
Ga0066705_1089179313300005569SoilPAPFRYLRRRAAPDEAFASTVAAAREPVYVYFRHEDEPTAPAYAARLRELLDEL*
Ga0066708_1004950813300005576SoilAPFRYLRRREAPDAAFAAAVAAAREPVYVYFRHEDEPTAPAHASRLLELLKSS*
Ga0068852_10272253223300005616Corn RhizosphereFRFLRRREPPDDAFVERVRAVREPTYVYFRHGDEPEAPRYASELLSRM*
Ga0075288_108755413300005874Rice Paddy SoilRRREPPDEAFAAAIGASAQPVYVYFRHDDEPAAPAHAARLLELLG*
Ga0075284_103928423300005885Rice Paddy SoilHPAPFRYLRRRESPDETFAATIRAADEPVYVYFRHEDEPTAPAYAERLRELLG*
Ga0075278_103330313300005893Rice Paddy SoilFRYLRRREPPDEAFAAAIGASAEPVYVYFRHDDEPAAPAHAARLLELLG*
Ga0075278_103843013300005893Rice Paddy SoilLGHPAPFRYLRRRESPDETFAATIRAADEPVYVYFRHEDEPTAPAYAERLRELLG*
Ga0075270_100141123300005894Rice Paddy SoilVNDLEHPAPFRYFRRREPPDDEFAARIRACAEPVYVYFRHDEEPSAPAHAQRLLELLSRGGSSCRPSR*
Ga0066652_10022670313300006046SoilLEHPAPFRYLRRREAPDAAFAATVAAAQEPVYVYFRHDDEPAAPAHAARLRELLES*
Ga0070712_10194706323300006175Corn, Switchgrass And Miscanthus RhizosphereRRREPPDEALAERIRACAEPVYVYFRHEDEPTAPAFAQRLVDLLES*
Ga0079222_1225810413300006755Agricultural SoilEHPAPFRYLRRRDAPDEELAARLRDVREPVYVYFRHDDEPRAPAHAARLLELLSAP*
Ga0066659_1113735213300006797SoilPAPFRLLRRREAPDAAFAAAVAAAKEPVYVYFRHEDEPTAPAYATRLLELLAKL*
Ga0079221_1143034413300006804Agricultural SoilDLDHPAPFRYLRRREAPDAAFAAAVAAAREPVYVYFRHEDEPTAPAHAARLLELLEAT*
Ga0068865_10148423213300006881Miscanthus RhizospherePFRYLRRREAPDEAFAAAVAAVKEPVYVYFRHDDEPAAPAHAERLRELLGVR*
Ga0075436_10080667823300006914Populus RhizosphereFRYLRRREAPDEAFVATIAAAREPVYVYFRHDDEPEAPAHAARLLELLSER*
Ga0079219_1143456623300006954Agricultural SoilLRRREAPDEAFAAAVAAAREPVYVYFRHDDEPTAPVYGTRLLEML*
Ga0105237_1233107413300009545Corn RhizosphereAPFRYLRRREAPDAAFAAMVAALREPVYVYFRHEDEPTAPAYAAQLLELV*
Ga0105238_1014177013300009551Corn RhizosphereVGDLDHPARFRYLRRREAADEAFAAVVAGAKEPVYVYFRHDDEPAAPAHALQLRELLRGGN*
Ga0116216_1026452023300009698Peatlands SoilDHPAPFRYLRRREAPDEEFAARVRAAAEPVYVYFRHEDKPTAPAYAQLLVELLS*
Ga0136219_100832313300010227SoilXXXXNDLDHPAPFRYLRRRDAPDDAFAARIRAAGEPVYVYFRHDDEPDAPAHAARLQELLREG*
Ga0134080_1030998023300010333Grasslands SoilPAPFRYLRRREAPDEAFAAIVAASEEPVYVYFRHDEEPDALAHVGRLRALLESR*
Ga0126372_1045471913300010360Tropical Forest SoilFRYVRRREPPDAAFAAALAAAREPVYVYFRHEDEPTAPVHASRLLELLES*
Ga0134128_1139080213300010373Terrestrial SoilPFRYLRRREAPDEAFAAAVTALREPVYVYFRHDDEPAAPAHAARLLEMVDG*
Ga0134126_1105014723300010396Terrestrial SoilFRYLRRREPPDEEFAARVRACTEPVYVYFRHDDEPDAPKHALRLMELLGL*
Ga0134126_1186767613300010396Terrestrial SoilDLDHPAPFRYLRRREPPDEEFAAKIRAATEPVYVYFRHDEAPTAPAYAAMLQELVSAA*
Ga0126383_1163606913300010398Tropical Forest SoilLDHPAPFRYLRRREAPDAAFAATVASLKDPVYVYFRHDDEPNAPAHAARLRELLEA*
Ga0137382_1040837823300012200Vadose Zone SoilRRREAPDAAFAARIAAAAEPVYVYFRHDDEPAAPAYAAALRNLLAEG*
Ga0137363_1048540023300012202Vadose Zone SoilFRYLRRREAPDEEFAARIRSAREPVYVYFRHDDEPTAPAHAQQLLEIL*
Ga0137362_1152056723300012205Vadose Zone SoilYLRRREPPDAEFAAKIRAATEPVYVYFRHDEAPDAPAHAARLRELLSGG*
Ga0137378_1043333323300012210Vadose Zone SoilRLLRRREAPDAAFAAAVAEAKEPLYVYFRHEDEPTAPAYATRLLELLAKL*
Ga0150985_10618302323300012212Avena Fatua RhizosphereADRVGDLTSPAPFRYLRRREPPDESFAAAIAAAAEPVYVYFRHGDEPEAPAYAEQLRALLR*
Ga0137371_1021315123300012356Vadose Zone SoilVGDLEHPAPFRYFRRREAPDAAFAATVAAAQEPVYVYFRHDDEPAAPAHAARLRELLEP*
Ga0137371_1069011713300012356Vadose Zone SoilAPFRYLRRREAPDAAFAATVAAAQEPVYVYFRHDDEPAAPAHAARLRELLES*
Ga0150984_10723177123300012469Avena Fatua RhizosphereAPFRYLRRREAPDEAFAATVAAAQEQVYVYFRHDDQPAAPAHAARLRELLDS*
Ga0150984_11745087713300012469Avena Fatua RhizosphereRREAPDESFAATIAASAEPVYVYFRHGDAPEAPVYAEQLRELLA*
Ga0157299_1010350513300012899SoilDLDHPAPFRYLRRREAPDEAFVAAVAAVKEPVYVYFRHDDEPAAPAHAARLRELLGVR*
Ga0157288_1038822413300012901SoilPFRYLRRREAPDAAFAAAVAAAQEPVYVYFRHEDEPTAPAHAARLLELL*
Ga0126369_1266922533300012971Tropical Forest SoilHPAPFRYLRRREAPDELFAAAVAAAREPVYVYFRHDDEPTAPAHAVRLRELLEP*
Ga0164308_1000477013300012985SoilVDDVEHPAPFRYLRRREAPDAAFAAMVAALREPVYVYFRHDDEPTAPAYAAQLLELV*
Ga0164304_1120274713300012986SoilAPFRYLRRREAPDDDFVERVRALAEPAYVYFRHDDAPDAPRYAEELLSRLR*
Ga0164307_1131932813300012987SoilRLAADGAVRVGDLTSPAPFRYLRRREEPDEAFAAAIAAATEPVYVYFRHGDAPEAPAYAERLDELLA*
Ga0164305_1141551413300012989SoilRRREAPDDAFAARIRATREPVYVYFRHDDEPDAPAHAARLQELLSGS*
Ga0157372_1056227413300013307Corn RhizosphereRVGDLDHPAPFRYLRRREAPDAAFAAAVSPVEEPVYVYFPHDDEPAAPAHAAQLHELLES
Ga0120171_103220723300014827PermafrostRYLRRREPPDEAFAARIRALQEPVYVYFRHDEAPTAPAYAAQLRALLSEA*
Ga0167658_100732143300015195Glacier Forefield SoilPFRYLRRREAPDDEFAARIRALREPVYVYFRHDEAPTAPAHAAQLRAMLSEA*
Ga0137412_1039762633300015242Vadose Zone SoilDHPAPFRYLRRREPPDAEFAAKTAAAAEPVYVYFRHDEAPTAPAYAAQLLELLSAA*
Ga0134073_1015864313300015356Grasslands SoilLEHPAPFRYLRRREAPDDAFAARIRACAEPVYVYFRHDDAPDAPAHAQRLIELLRTT*
Ga0132258_1064253943300015371Arabidopsis RhizosphereDLEHPAPFRYLRRREAPDEAFAAAVAATSEPVYVYFRHGDEPDAPAYAEQLKELLAR*
Ga0132255_10295188723300015374Arabidopsis RhizosphereAPFRYLRRREAPDAAFAVMVAALREPVYVYFRHEDEPTAPAYAARLRALVGGA*
Ga0187823_1034849113300017993Freshwater SedimentHAAPFRYVRRREAPDDAFADRIRACAEPVYVYFRHDEEPTAPQHAQWLIERLS
Ga0187822_1021607613300017994Freshwater SedimentTPFRYLRRREPPDDEFAARIRACAEPVYVYFRHDEEPLAPAHAQRLLELLS
Ga0066655_1115690613300018431Grasslands SoilLLRRREAPDAAFAAAVAAAKEPVYVYFRHEDEPTAPAHATRLLELLAKL
Ga0066667_1077065833300018433Grasslands SoilPFGSVRRREAPRGASAAAVAAAKEPIYVYFRHDDEPAAPAHAERLRELLRSR
Ga0193749_106526513300020010SoilRREPPDAAFAARVAAVREPVYVYFRHEDEPDAPAYASRLLALLESPRP
Ga0182009_1037254723300021445SoilYLRRREAPDEAFAAAIAGATEPVYVYFRHGDEPEAPAYAEQLKALLS
Ga0126371_1104204013300021560Tropical Forest SoilLDHPAPFRYLRRREAPDREFAALVAVAAARERVFVYFRHDDEPAAPAHAERLRELLDP
Ga0247676_107275413300024249SoilDLDHPAPFRYLRRREAPDAAFAAAVAAVEEPVYVYFRHDDEPAAPAHAAQLHELLET
Ga0179589_1062898813300024288Vadose Zone SoilEANAVRVNDLGHPAPFRYLRRRDAPDDAFAAQIRAAAEPVYVYFRHDDAPDAPAHAARLEELLSES
Ga0208220_114195923300025627Arctic Peat SoilPFRYLRRREAPDEAFAARIRAASEPVYVYFRHEDEPTAPAYAQQLVERLS
Ga0207680_1008119433300025903Switchgrass RhizosphereDLDHPAPFRYLRRREAPDEAFAAAVAAAREPVYIYFRHDDEPAAPAHAARLLGLLGRR
Ga0207705_1025266623300025909Corn RhizosphereVNDVEHEAPFRYLRRREAPDDAFVARVHALAEPAYVYFRHGDEPDAPRYAETLLSGS
Ga0207705_1049313623300025909Corn RhizospherePAPFRFLRRREPPDDAFVERVRAVREPTYVYFRHGDEPEAPRYASELLSRM
Ga0207707_1023265513300025912Corn RhizosphereRVGDLDHPARFRYLRRREAPDEAFAAVVAGAKEPVYVYFRHDDEPAAPAHALQLRELLRGGN
Ga0207687_1138431013300025927Miscanthus RhizosphereLDHPAPFRYLRRREAPDQAFAAAVAAVKEPVYVYFRHDDEPAAPAHAERLRELLGVR
Ga0207700_1107795213300025928Corn, Switchgrass And Miscanthus RhizosphereHPAPFRYLRRREAPDAAFAAAVAAVEEPVYVYFRHDDEPTAPAHAARLHELLET
Ga0207700_1124856023300025928Corn, Switchgrass And Miscanthus RhizosphereYLRRREAPDAAFAAAVAAVEEPVYVYFRHDDEPAAPAHAAQLHELLET
Ga0207700_1184108513300025928Corn, Switchgrass And Miscanthus RhizosphereAPVRYLRRREPPDEAFASTILAATEPVYVYFRHDEAPTAPAYAAQLLELLSAA
Ga0207644_1065502213300025931Switchgrass RhizosphereAEAGVVRVDDVEHPAPFRYLRRREAPDAAFAAMVAALREPVYVYFRHEDEPTAPAYAAQLLELV
Ga0207679_1077464313300025945Corn RhizospherePAPFRYLRRREAPDDAFSARIRATTEPVYVYFRHDEKPDAPAHAARLQELLSES
Ga0208527_101059513300025990Rice Paddy SoilLGHPAPFRYLRRRESPDETFAARIRAADEPVYVYFRHEDEPTAPAYAERLRELLG
Ga0207641_1185777623300026088Switchgrass RhizosphereVEHPAPFRYLRRREAPDAAFAAMVAALREPVYVYFRHEDEPTAPAYAAQLLELV
Ga0207698_1106813413300026142Corn RhizosphereGAVRVNDLEQPAPFRFLRRREPPDEAFVERVRALREPTYVYFRHGDEPEAPRYAEDLLSR
Ga0209161_1025107823300026548SoilVRVADLAPPAPFRYLRRREAPDAAFAAAVAAAREPVYVYFRHEDEPTAPAHASRLLELLKSS
Ga0209073_1019132333300027765Agricultural SoilGDLDHPAPFRYLRRREAPDAAFAAAVAAVEEPVYVYFRHDDDPAAPAHAARLRELLEP
Ga0307317_1026718723300028720SoilAPFRYLRRREAPDDAFAAQIRAASEPVYVYFRHDDAPDAPAHAARLEELLSGS
Ga0307315_1006112423300028721SoilRREAPDDAFAAQIRAASEPVYVYFRHDDAPDAPARAARLEELLSGS
Ga0307277_1021706033300028881SoilAPFRYLRRREAPDEAFAAAVAAAREPVYVYFRHDDEPTAPAYAARLRELLDAH
Ga0307498_1000408913300031170SoilHPAPFRYLRRREAPDAAFAATVAAAQEPVYVYFRHDDDPAAPAHAAQLRELLDP
(restricted) Ga0255312_106785413300031248Sandy SoilRREAPDDAFAERIRACTEPVYVYFRHEDEPTAPAYAQQLIEQLS
Ga0318496_1061978423300031713SoilYLRRRETPDKAFAAAVASAQEPVYVYFRHDDEPAAPAHAARLRELLDS
Ga0307469_1095559113300031720Hardwood Forest SoilGDLEHPATFRYLRRREPPDAAFAAAVAAAHEPVYVYFRHDDEPTAPANASRLRELLES
Ga0307477_1000727623300031753Hardwood Forest SoilVNDLEHPASFRYLRRREPPDSAFAAALAALREPAYVYFRHEDEPTAPAHASRLLELLGAR
Ga0307475_1025262913300031754Hardwood Forest SoilVNDLDHPAPFRYLRRREAPDEEFAARIRAASEPVYVYFRHEDEPTAPAYAQQLLEMLD
Ga0318546_1055295523300031771SoilVGDLDHPAPFRYLRRREAPDEAFAAAVAEAREPVYVYFRHDDEPTAPAHAVRLRELLD
Ga0318536_1014107313300031893SoilDLEHPAPFRYLRRRETPDKTFAAAVASAQEPVYVYFRHDDEPAAPAHAARLRELLDS
Ga0308176_1261557413300031996SoilPFRYLRRREAPDAVFAARVAAASEPVYVYFRHDEEPHAPAHAAALRTLLSER
Ga0318514_1020303813300032066SoilRYLRRREAPDDAFAAAVAAAEEPVYVYFRHDDEPAAPAHAARLRELLDS
Ga0308173_1101250813300032074SoilAADGAVRVDDLEHPASFRYLRRREAPDDTFVERIRACTEPVYVYFRHDDEPAAPAHAARLRELLG
Ga0308173_1202831223300032074SoilPRLSEAGAVRVDDLEHPAPFRYLRRRAAPDDAFAAAVRDAAEPVYVYFRHGDEPDAPRYAAALVSSS
Ga0335079_1235489413300032783SoilRREPPDEAFAAAVASAREPVYVFFRHDDEPAAPAHAARLLELLGSSS
Ga0335072_1108332313300032898SoilHPAPFRYLRRREAPDETFAAAVAAADEPVYVYFRHDDEPDAPAHAMWLRELLES
Ga0335076_1012497833300032955SoilYLRRREAPDAALAAAVAAAREPVYVYFRHDDEPTAPAHASRLRELLQAR
Ga0310914_1068952813300033289SoilLAEAGAVRVGDLEHAAPFRYLRRRETPDKAFAAAVASAQEPVYVYFRHDDEPAAPAHAARLRELLDS
Ga0314862_0065140_649_8043300033803PeatlandFRYLRRREAPDPAFATAVAATREPVYVYFRHDDEPAAPGHAVRLLELLESL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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