Metagenome / Metatranscriptome Family F057191

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F057191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	83 residues
Representative Sequence	PNPYAAYGAQAMLVMLQAVAAGGGSRAATTKAIFGIKITNGILGNFTINATGDTNLTPITIYKQAGKNLIPVKTLVPSASLIGG
Number of Associated Samples	118
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.74 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	94.85 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (92.647 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.706 % of family members)
Environment Ontology (ENVO)	Unclassified (29.412 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.735 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 24.11% Coil/Unstructured: 50.89%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.64
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF02653	BPD_transp_2	65.44
PF13458	Peripla_BP_6	1.47
PF00005	ABC_tran	0.74
PF12399	BCA_ABC_TP_C	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.65 %
Unclassified	root	N/A	7.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.65 %
Unclassified	root	N/A	7.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.65 %
Unclassified	root	N/A	7.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.88 %
Unclassified	root	N/A	7.35 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.88 %
Unclassified	root	N/A	7.35 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.41 %
Unclassified	root	N/A	7.35 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.47 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	54.41 %
Unclassified	root	N/A	7.35 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.47 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	54.41 %
Unclassified	root	N/A	7.35 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.47 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	54.41 %
Unclassified	root	N/A	7.35 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.47 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	54.41 %
Unclassified	root	N/A	7.35 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.74 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5401DHFV0	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig39236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1134	Open in IMG/M
2140918007\|ConsensusfromContig135380	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
2140918008\|ConsensusfromContig264030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	633	Open in IMG/M
2170459024\|GZRSKLJ01EL2J1	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300000886\|AL3A1W_1633023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300001535\|A3PFW1_10307277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300001538\|A10PFW1_11387690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300001664\|P5cmW16_1042847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	810	Open in IMG/M
3300002568\|C688J35102_120606391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300004081\|Ga0063454_101747778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300004114\|Ga0062593_103145556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300004803\|Ga0058862_10178002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300005175\|Ga0066673_10592003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300005178\|Ga0066688_10348990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300005327\|Ga0070658_11272938	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300005327\|Ga0070658_11436029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300005329\|Ga0070683_100621950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1034	Open in IMG/M
3300005329\|Ga0070683_101776973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300005337\|Ga0070682_100135183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1674	Open in IMG/M
3300005337\|Ga0070682_101994927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300005344\|Ga0070661_100304702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1241	Open in IMG/M
3300005366\|Ga0070659_101451838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300005366\|Ga0070659_101773154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300005434\|Ga0070709_10393002	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300005435\|Ga0070714_101830692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300005436\|Ga0070713_100989640	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005436\|Ga0070713_101827810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300005437\|Ga0070710_10577318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300005454\|Ga0066687_10367358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300005468\|Ga0070707_100113665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	2627	Open in IMG/M
3300005468\|Ga0070707_100495389	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300005518\|Ga0070699_101257999	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005518\|Ga0070699_101712844	Not Available	576	Open in IMG/M
3300005529\|Ga0070741_11260142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300005530\|Ga0070679_101280181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300005530\|Ga0070679_101990076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300005540\|Ga0066697_10698005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300005547\|Ga0070693_100975541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300005552\|Ga0066701_10679748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300005553\|Ga0066695_10410157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300005559\|Ga0066700_10697483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300005561\|Ga0066699_11038154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005563\|Ga0068855_100518182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300005563\|Ga0068855_100743189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1047	Open in IMG/M
3300005563\|Ga0068855_102179828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300005616\|Ga0068852_102401610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300005616\|Ga0068852_102847982	Not Available	502	Open in IMG/M
3300005893\|Ga0075278_1033846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	736	Open in IMG/M
3300006028\|Ga0070717_10359058	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300006806\|Ga0079220_10179883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1199	Open in IMG/M
3300006852\|Ga0075433_10556700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300006903\|Ga0075426_11300816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006903\|Ga0075426_11375708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300007258\|Ga0099793_10545263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300007788\|Ga0099795_10639509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300009012\|Ga0066710_101266642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1143	Open in IMG/M
3300009090\|Ga0099827_11704853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300009093\|Ga0105240_12806266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300009174\|Ga0105241_11215460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300009551\|Ga0105238_10231598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1824	Open in IMG/M
3300009617\|Ga0116123_1012920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2881	Open in IMG/M
3300009650\|Ga0105857_1074651	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300010107\|Ga0127494_1106748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1399	Open in IMG/M
3300010113\|Ga0127444_1117093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300010154\|Ga0127503_10004103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300010227\|Ga0136219_1016779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300010303\|Ga0134082_10455582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300010373\|Ga0134128_12567208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300010373\|Ga0134128_12810889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300010401\|Ga0134121_11039232	Not Available	807	Open in IMG/M
3300011271\|Ga0137393_11243988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300011271\|Ga0137393_11692531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300012189\|Ga0137388_11729676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300012198\|Ga0137364_11364354	Not Available	526	Open in IMG/M
3300012200\|Ga0137382_10277222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1166	Open in IMG/M
3300012208\|Ga0137376_10131042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2147	Open in IMG/M
3300012208\|Ga0137376_11550534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300012351\|Ga0137386_10836339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300012359\|Ga0137385_11279881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300012361\|Ga0137360_11166635	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012363\|Ga0137390_11534199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300012469\|Ga0150984_111604897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300012927\|Ga0137416_10561414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	990	Open in IMG/M
3300012929\|Ga0137404_11924617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300012930\|Ga0137407_10578552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1053	Open in IMG/M
3300012931\|Ga0153915_12415566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300012931\|Ga0153915_12958245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300012951\|Ga0164300_10894954	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300012955\|Ga0164298_10043962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2102	Open in IMG/M
3300012958\|Ga0164299_11132023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300012958\|Ga0164299_11697934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300012960\|Ga0164301_11034745	Not Available	648	Open in IMG/M
3300012961\|Ga0164302_11494163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300012987\|Ga0164307_10401138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1010	Open in IMG/M
3300013105\|Ga0157369_11460557	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300013765\|Ga0120172_1021304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1889	Open in IMG/M
3300013772\|Ga0120158_10444828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300014150\|Ga0134081_10192844	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300015374\|Ga0132255_103899925	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300017654\|Ga0134069_1394954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300017927\|Ga0187824_10259569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300017936\|Ga0187821_10068980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1280	Open in IMG/M
3300017961\|Ga0187778_11312130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300017994\|Ga0187822_10138954	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300018021\|Ga0187882_1095373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1280	Open in IMG/M
3300018032\|Ga0187788_10456266	Not Available	546	Open in IMG/M
3300018431\|Ga0066655_11216977	Not Available	535	Open in IMG/M
3300019888\|Ga0193751_1202905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300019999\|Ga0193718_1090954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300020062\|Ga0193724_1120698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300021086\|Ga0179596_10442014	Not Available	658	Open in IMG/M
3300022507\|Ga0222729_1059284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300024347\|Ga0179591_1158108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2307	Open in IMG/M
3300025441\|Ga0208456_1076830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300025448\|Ga0208037_1017087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1793	Open in IMG/M
3300025906\|Ga0207699_11267842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300025909\|Ga0207705_10994909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300025910\|Ga0207684_11509185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300025912\|Ga0207707_10037591	All Organisms → cellular organisms → Bacteria	4231	Open in IMG/M
3300025921\|Ga0207652_11248968	Not Available	645	Open in IMG/M
3300025928\|Ga0207700_10491823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1085	Open in IMG/M
3300025929\|Ga0207664_10047962	All Organisms → cellular organisms → Bacteria	3357	Open in IMG/M
3300025929\|Ga0207664_11300088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	647	Open in IMG/M
3300025932\|Ga0207690_10992198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300025944\|Ga0207661_11613168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300026078\|Ga0207702_12048461	Not Available	562	Open in IMG/M
3300026317\|Ga0209154_1086274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1349	Open in IMG/M
3300027546\|Ga0208984_1103495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300027862\|Ga0209701_10459856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300028654\|Ga0265322_10236712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300028811\|Ga0307292_10255134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300031094\|Ga0308199_1146640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300031241\|Ga0265325_10133957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1184	Open in IMG/M
3300031251\|Ga0265327_10429245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300032205\|Ga0307472_101737622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.15%
Host-Associated	Host-Associated	19.12%
Engineered	Engineered	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.79%
Plants	Host-Associated → Plants	18.38%
Aquatic	Environmental → Aquatic	7.35%
Human	Host-Associated → Human	0.74%
Lab Enrichment	Engineered → Lab Enrichment	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.24%
Freshwater	Environmental → Aquatic → Freshwater	7.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.15%
Digestive System	Host-Associated → Human → Digestive System	0.74%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.53%
Loam	Environmental → Terrestrial → Soil → Loam	21.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.94%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.41%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.74%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.74%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.62%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.15%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.21%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.21%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.21%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.21%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.47%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.47%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.74%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.74%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009650	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-061	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010113	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010227	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2	Engineered	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025441	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100 (SPAdes)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028654	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG	Host-Associated	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_05473440	2070309009	Soil	GAKFVKSFGKSVGATPNPYAAYGAQAMKVMLTAIQKGGGDRAKTTSSLFNLNVTNGILGNFTINSTGDTNLVPITIYRQAGKKLVPVKTLTPTSDLIG
A5_c1_00289680	2124908044	Soil	PPKSLTGQGATFVKSFGKQIGTEPNPYSQYGAQAMQVLLQAVAAGGGDRAKTTKAIFGIQISNGIIGNFSINSSGDINLTPITIYKQVGKKLVPQKTLIPAANLVGGP
A_all_C_01103930	2140918007	Soil	HQRRRRAAVRPEGCRRDFVKSFGKQVGTTPNPYAAYGAQAMEVMLQAISVGGGQRSTTTKALFGLNVPNGILGSFTIGASGDTNLTPVTIYKQKGKALVPVKTLVPSASLVG
Bog_all_C_01487360	2140918008	Soil	FVSSFGKQIGTTPNPYAAYGAQAMEVMLSAVAKGGGQRASTTKGLFGLTITNGILGNFTINATGDTNLTPITIYKQSGKNLNPVKTLVPTASLIG
FD1_04788540	2170459024	Grass Soil	GANFVKSFGKSIGTVPNPYAAYGAQAMEVMLQAIAKSGGQRAATTKAFFGLTVNNGILGNFNINSTGDTSSLAVTIYRQSGKNLVPVKTLVPPASLIG
AL3A1W_16330231	3300000886	Permafrost	KSLTGQGAIFVKSFGKQIGTEPNPYAQYGAQAMQVMLQAVAAGGGDRAKTTKAIFGIHITNGIIGNFSINSTGDINLTPITIYKQAGKKLIPQKTIIPAANLVGGP*
A3PFW1_103072771	3300001535	Permafrost	SRAATTKAIFGIKITNGILGNFTINATGDTNLTPITIYKQAGKNLIPVKTLVPSASLIGG
A10PFW1_113876901	3300001538	Permafrost	MLQAVAAGGGSRAATTKAIFGIKITNGILGNFTINATGDTNLTPITIYKQAGKNLIPVKTLVPSASLIGG*
P5cmW16_10428471	3300001664	Permafrost	MQVMLQAVAAGGGDRAKTTKAIFGIHITNGIIGNFSINSTGDINLTPITIYKQAGKKLIPQKTIIPAANLVGGP*
C688J35102_1206063912	3300002568	Soil	PNPYAAYGAQAMLVALQAVAAHGGDRAATTRTVFGLHIQNGVLGNFTIGKNGDTDALAVTIYKQSGKLLIPQKTIVPQASLIG*
Ga0063454_1017477781	3300004081	Soil	VPNPYAAYGAQAMLVALQAVAAKGGDRAGITRTVFGLHVSNGVLGNFSINKSGDTDALAITIYQQHGKILTPVKTLTPSASLIGG*
Ga0062593_1031455561	3300004114	Soil	KQIGTTPNPYAAYGAQAMLLMLQAVTAGKGDRAKTTSSLFGTTITNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG*
Ga0058862_101780021	3300004803	Host-Associated	GKGDRAKTTSSLFGTTITNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG*
Ga0066673_105920031	3300005175	Soil	GATFVKSFGKQIGTEPNPYSQYGAQAMQIVLQAVATGGGDRAKTNKAVFGLHITGGIIGNFTINSTGDTNLTPITIYKQVGKKLVPQKTLIPAANLVG*
Ga0066688_103489901	3300005178	Soil	AYGAQAMLVMLDAVAKSGGNRAQVTKSMFGITISNGILGNFTINAQGDTNLTPITIYKQSGKNLNPVKTIVPSASLIG*
Ga0070658_112729382	3300005327	Corn Rhizosphere	QAVTTGKGDRAKTTSSLFGTTITNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG*
Ga0070658_114360291	3300005327	Corn Rhizosphere	GATFVKSFGKQIGTTPNPYAAYGAQAMLVMLQAVARGGGDRAKTTAGLFGLSISNGILGNFTINATGDTNLTPITIYKQAGKNLNPVKTLVPTASLTG*
Ga0070683_1006219501	3300005329	Corn Rhizosphere	ALQAVATRPGDRAAITRSVFGLHVSNGVLGNFTINSAGDTSLTPITIYKQVGKNLIPVKTLIPQASLIG*
Ga0070683_1017769731	3300005329	Corn Rhizosphere	QIGTTPNPYAAYGAQAMLLMLQAVTAGKGDRAKTTSSLFGTTITNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG*
Ga0070682_1001351833	3300005337	Corn Rhizosphere	GQPPKSLTGQGAIFVKSFGKQIGTAPNPYSQYGAQAMQVMLKAVSLGGGDRAKTTKAIFGISITNGIIGNFSINSTGDTNLTPITIYKQAGKQLVAVKTLIPPPSLTGASG*
Ga0070682_1019949271	3300005337	Corn Rhizosphere	LVALQAVAAHGGDRAAITRSVFGLKISGGVLGNFTIGANGDTDALAITIYKQAGKDLIPVKTLVPSANLLG*
Ga0070661_1003047021	3300005344	Corn Rhizosphere	PNPYAAYGAQAMLLMLQAVTAGKGDRAKTTSSLFGTTIKNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG*
Ga0070659_1014518381	3300005366	Corn Rhizosphere	QIGTTPNPYAAYGAQAMLLMLQAVAAGNGDRAKTTKAIFGIHITNGILGDFTINAAGDTNLAPITIYRQAGKALKPVKTITPDPSLIG*
Ga0070659_1017731542	3300005366	Corn Rhizosphere	AAYGAQAMLVALQAVAAHGGDRAAITRSVFGLKISGGVLGNFTIGANGDTDALAITIYKQAGKDLIPVKTLVPSANLLG*
Ga0070709_103930021	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AVANGAYISVAGQPPKSLTGQGATFVKSFGKQIGAFPNPYAQYGAQAMQVMLQAVATGAGDRAKTTKSIFGINITNGIIGNFTINSTGDINLTPITIYRQAGKQLVPVKTLIPPANLTGG
Ga0070714_1018306922	3300005435	Agricultural Soil	AYGAQAMLVMLQAIAKSGGDRAKATSGLFGLTITNGILGNFTINAAGDTNLTPITIYKQAGKNLIPVKTLVPDASLRG*
Ga0070713_1009896402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	GAYISVAGQPPKSLTGVGATFVKSFGKQIGTEPNPYSQYGAQAMQVLLQAVASGGGDRARTTKAIFGIKITNGIIGNFTINSTGDTNLTPITIYKQVGKKLVPQKTIIPAANLVG*
Ga0070713_1018278101	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	PYAAYGAQAMLVAMQAVGAHPGDRAAITKTVFGLHISGGVLGNFTIGANGDTDALAITIYKQAGKQLLPVKTLVPSASLLGG*
Ga0070710_105773181	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LQAVAAHGGDRAAITRTVFGLHVTGGVLGNFTIGTNGDTDALAVTIYKQAGKQLIAVKTLVPQASLIG*
Ga0066687_103673581	3300005454	Soil	NPYSAYGAQAMDVALQAIAKGGGQRAATTKQVFGITITNGILGNFTINSTGDTNALAITIYKQAGKNLNPVKTLVPQSTLIGG*
Ga0070707_1001136653	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	FIKSFGKQIGTTPNPYAAYGAQAMDVMLSAIAKGGGQRATTTKGIFGLSITNGIIGSFTINSTGDTSLGTITIYKQAGKNLNPQKTLVPSASLIGG*
Ga0070707_1004953891	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	GAGAVFVKSFGKQVGTTPNPYSAYDAQAMEVMLSAVAKGGGQRAGTTKGIFGLHVTNGIIGTFTINSTGDTDLGAITVYKQSGKKLIPIKTLIPSASLTGA*
Ga0070699_1012579992	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GQPPKSLTGQGATFVKSFGKQIGAFPNPYAQYGAQAMQVMLQAVATGAGDRAKTTKSIFGINITNGIIGNFTINSTGDINLTPITIYRQAGKQLVPVKTLIPPANLTGG*
Ga0070699_1017128442	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	AKGGGQRASTTKGLFGLSITNGIIGTFTINSTGDTNLGAITIYKQSGAKLVPIKTLIPSSSLTG*
Ga0070741_112601422	3300005529	Surface Soil	KSFGKSIGTTPNPYAAYGAQAMLVAMQAVALHGGDRAATTRSAFGLHIANGILGNFSINAAGDTDALAITIYKQSGKSLIPVKTLTPTPSLIG*
Ga0070679_1012801811	3300005530	Corn Rhizosphere	QPPKSLTGVGATFVKSFGKQIGTEPNPYSQYGAQAMQVVLQAVAAGGGDRAKTNKAVFGLSITGGIIGNFTINSSGDTNLTPITIYKQVGKKLVPQKTLIPAANLVG*
Ga0070679_1019900761	3300005530	Corn Rhizosphere	ATFVKSFGKQIGTTPNPYAAYGAQAMLLMLQAVAAGNGDRAKTTKAIFGIHITNGILGDFTINAAGDTNLAPITIYRQAGKALKPVKTITPDPSLIG*
Ga0066697_106980051	3300005540	Soil	VAAGGGDRAKTTKAIFGIHITNGIIGNFTINATGDINLTPVTIYKQAGKELVPVKTLIPSANLIGG*
Ga0070693_1009755411	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	YGAQAMLLMLQAVAAGNGDRAKTTKAIFGIHITNGILGDFTINAAGDTNLAPITIYRQAGKALKPVKTITPDPSLIG*
Ga0066701_106797482	3300005552	Soil	GATFIKSFGKQVGAEPNPYAQYGAQAMQVVLQAVAAGGGDRAKTTKAIFGINITNGIIGNFTINATGDTNLTPVTIYKQAGKKLVPVKTLIPSASLVGGG*
Ga0066695_104101571	3300005553	Soil	TSPNPYSQYGAQAMQVMLKAVATGGGDRAKTNKSIFGITITNGIIGNFTINATGDTNLIPITIYKQAGKNLVPVKTIIPPASLVGGA*
Ga0066700_106974832	3300005559	Soil	VMLDAVAKSGGNRAQVTKSLFGISITNGILGNFTINAQGDTNLTPITIYKQSGKNLNPVKTIVPASNLIG*
Ga0066699_110381542	3300005561	Soil	VMLKVIAKSGGQRANVTKGLFGLTITNGILGNFTINSQGDTSLQPITIYKQSGKNLNPVKTIVPSAGLT*
Ga0068855_1005181821	3300005563	Corn Rhizosphere	VGLHGGDRAAISRSVFGLHVVNGVLGTFTINKNGDTSLTPITVYRQQGKILKPVKTIVPSASLIGG*
Ga0068855_1007431891	3300005563	Corn Rhizosphere	PNPYAAYGAQAMLVALQAVASRPGDRARITRTVFGLHVTGGVLGNFTIGAGGDTDALAITIYKQSGKNLIPVKTLTPSPSLIG*
Ga0068855_1021798281	3300005563	Corn Rhizosphere	SLGGGDRAKTTKSIFGITITNGIIGNFSINATGDTNLTPITIYKQAGKQLIAQKTLIPPPSLTGASG*
Ga0068852_1024016101	3300005616	Corn Rhizosphere	MQVVLKAVAAGGGDRAKTTKAIFGINITGGIIGNFSINATGDTNLTPITIYKQAGKQLIAQKTLIPPPSLTGASG*
Ga0068852_1028479822	3300005616	Corn Rhizosphere	PNPYAAYGAQAMLVALQAVAAHGGDRAATTRTVFGLHVSNGVLGNFTIGKTGDTDALQITVYKQQGKLLKPVKTLTPSPSLIG*
Ga0075278_10338461	3300005893	Rice Paddy Soil	YGAQAMLVMLQAVAAGGGDRARTTKALFGLHVGNGILGDFTINSAGDTNLAPITIYRQAGKNLKAVKTITPDPGLIG*
Ga0070717_103590582	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GAYISVAGQPPKSLTGTGATFIKSFGKQIGTQPNPYSQYGAQAMQVMLQAIAAGGGDRAKTNKAIFGITITNGIIGNFTINSTGDINLTPITIYKQSGKNLVPIKTIIPSPNLIG*
Ga0079220_101798831	3300006806	Agricultural Soil	GGQRAATTKQVFGITITNGILGNFTINSTGDTNNLAITIYKQAGKNLNPVKTLTPQSTLIGG*
Ga0075433_105567002	3300006852	Populus Rhizosphere	MQVMLQAVAAGGGDRAKTTKAIFGIHISNGIIGNFTINSTGDINLTPITIYRQAGKQLVPVKTLIPSANLVGG*
Ga0075426_113008162	3300006903	Populus Rhizosphere	QAIAKGGGQRAATTKQVFGITITNGILGNFTINSTGDTNNLAITIYKQAGKNLNPVKTLTPQSTLIGG*
Ga0075426_113757081	3300006903	Populus Rhizosphere	FVKSFGKQIGTFPNPYAAYGAEAMNVMLKVIAKSGGSRSAVTKGLFGLTVTNDILGTFTLNNQGDTSLQPITIYKQSGKNLNPVKTIVPAASLT*
Ga0099793_105452631	3300007258	Vadose Zone Soil	SFGKQVGTTPNPYSAYGAQAMEVMLSAIAKSGGQRAATTKGIFGLHITNGIIGTFSINSTGDTDLGAITIYKQSGKKLIPIKTLIPSASLTGA*
Ga0099795_106395091	3300007788	Vadose Zone Soil	KLQAVAQSGRDRKKATSGLFGLTVTNGILGNFTINAAGDTDLQPITIYKQAGKNLNPVKTLVPTASLTG*
Ga0066710_1012666422	3300009012	Grasslands Soil	YGAQAMQVVLQAVAAGGGDRAKTTKAIFGINITGGIIGNFSINATGDTNLTPITIYKQVGKKLVPQKTLIPPASLIGGA
Ga0099827_117048532	3300009090	Vadose Zone Soil	SFGKQIGTAPNPYAQYGAQAMQVMLQAVAAGAGDRAKTTKAIFGINITNGIIGNFSINASGDTNLTPITIYKQSGKNLVPVKTLIPAANLVGGP*
Ga0105240_128062662	3300009093	Corn Rhizosphere	LTGVGATFVKSFGKQIGTEPNPYSQYGAQAMQVVLQAVAAGGGDRAKTNKAVFGLSITGGIIGNFTINSSGDTNLTPITIYKQVGKKLVPQKTLIPAANLVG*
Ga0105241_112154601	3300009174	Corn Rhizosphere	YISVAGQPPKSLTGQGAIFVKSFGKQIGTAPNPYSQYGAQAMQVMLKAVSLGGGDRAKTTKAIFGISITNGIIGNFSINSTGDTNLTPITIYKQAGKQLIAQKTLIPPPSLTGASG*
Ga0105238_102315981	3300009551	Corn Rhizosphere	AAYGAQAMLVALQAVAAHGGDRAAVTHTVFGMQIQNGVLGNFSINKQGDTSALAITVYKQQGKNLNPVKTLTPTPDLVG*
Ga0116123_10129201	3300009617	Peatland	AQAMEVMLQAISVGGGQRSTTTKALFGLHVPNGILGSFTIGASGDTDLTPVTIYKQKGKALVPAKTLVPSASLVG*
Ga0105857_10746511	3300009650	Permafrost Soil	YGAQAMDVMLQAVAKGGGQRASTTKGIFGLTITNGILGNFSINSTGDTNLTPITIYKQAGKNLNPVKTLVPTASLIG*
Ga0127494_11067481	3300010107	Grasslands Soil	MLVMLQAVARGAGDRAKTTKAIFGLTVTNGILGNFTIDATGDTNLKPITIYVQKGKELKPVKTLVPSASLVGG*
Ga0127444_11170931	3300010113	Grasslands Soil	KSIGAVPNPYAAYGAQAMLVAMQAVGAHGGDRAAITRSVYGSVVTNGVLGNFTINKQGDTSSLAITIYKQQGKLLTPVKTLTPPASLIG*
Ga0127503_100041031	3300010154	Soil	MLQAVAAGAGDRAKTTKSIFGLTITNGIIGNFTINSSGDTNLTPITIYRQAGKALIPVKTIIPAANLVGGP*
Ga0136219_10167791	3300010227	Soil	QAVALGGGDRAKTTKAIFGINIRNGIIGNFTINATGDTNLTPITIYKQAGKNLVPVKTLIPSASLIGG*
Ga0134082_104555821	3300010303	Grasslands Soil	NPYAQYGAQAMQVVLQAVASGGGDRAKTNKAVFGLSITGGIIGNFTINSTGDTNLTPITIYKQVGKKLVPQKTLIPAANLVG*
Ga0134128_125672082	3300010373	Terrestrial Soil	LLMLQAVAAGNGDRAKTTKAIFGIHINNGILGDFTINSAGDTNLAPITIYRQAGKALKPVKTITPDPSLIG*
Ga0134128_128108892	3300010373	Terrestrial Soil	AVAAGGGDRAKTNKAIFGMTITNGILGTFTINSTGDTNLTPITIYKQAGKALIPVKTLVPAANLIGG*
Ga0134121_110392321	3300010401	Terrestrial Soil	PNPYSAYGAQAMLVMLDSIAKSGGQRANVAKSLFGLKVTNSILGTFTINSNGDTNLTPITIYKQVGKKLVPQKTIIPAANLVG*
Ga0137393_112439881	3300011271	Vadose Zone Soil	VGPGAIFVKSFGKQIGTTPNPYSAYGAQAMQVLLSAVAKSGGQRAGTTKGIFGLHITNGIIGTFSINSTGDTDLGAITIYKQSGKKLIPIKTLIPSASLTGA*
Ga0137393_116925312	3300011271	Vadose Zone Soil	AGTTKGIFGLHVTNGIIGTFSINSTGDTDLGTITIYKQSGAKLNPIKTLTPSASLTGA*
Ga0137388_117296762	3300012189	Vadose Zone Soil	MQVMLQAVAAGGGDRAKTTKAIFGINITNGIIGNFSINASGDTNLTPITIYKQSGKNLVPVKTLIPAANLVGGP*
Ga0137364_113643541	3300012198	Vadose Zone Soil	QAMQVMLQAVSAGGGDRAKTTHAIFGIKITNGIIGNFSINSTGDINLTPITIYKQVGKKLVAQKTLIPSANLVGGP*
Ga0137382_102772221	3300012200	Vadose Zone Soil	SLTGAGATFVKSFGKQIGTEPNPYSQYGAQAMQVVLQAVAAGGGDRAKTTKAIFGINITGGIIGNFSINATGDTNLTPITIYKQVGKKLVPQKTLIPPPSLIGGA*
Ga0137376_101310421	3300012208	Vadose Zone Soil	ATFVKSFGKQIGTEPNPYSQYGAQAMQVVLQAVAAGGGDRAKTTKAIFGITITGGIIGNFSINASGDTNLTPITIYKQVGKKLVPQKTLIPPPSLIGGA*
Ga0137376_115505342	3300012208	Vadose Zone Soil	QIGTEPNPYSQYGAQAMQVVLQAVAAGGGDRAKTTKAIFGIKITGGIIGNFSINATGDTNLTPITIYKQAGTKLIPQKTLIPPANLIG*
Ga0137386_108363392	3300012351	Vadose Zone Soil	TTPNPYSAYGAQAMQVLLSAVAKSGGQRAGTTKGIFGLHITNGIIGTFSINSTGDTDLGAITIYKQSGKKLIPIKTLIPSASLTGA*
Ga0137385_112798811	3300012359	Vadose Zone Soil	VAKSGGNRAQVTKSLFGITINNGILGNFTINAQGDTNLTPITIYKQTGKKLVPVKTIIPAANLVGG*
Ga0137360_111666351	3300012361	Vadose Zone Soil	AIAKSGGQRAATTKGIFGLHITNGIIGTFSINSTGDTDLGAITIYKQSGKKLIPIKTLIPSASLTGA*
Ga0137390_115341991	3300012363	Vadose Zone Soil	TPNPYSAYGAQAMEVILQAIARGGGNRGATTKAIFGLRITNGILGSFTINSSGDTDLLPITVYKQQGKNLVPVRTITVPKNLLG*
Ga0150984_1116048971	3300012469	Avena Fatua Rhizosphere	GAVPNPYAAYGAQAMLVALQAVAAHGGDRAATTRTVFGLHVANGVLGNFTIGKTGDTDALQITVYKQQGKLLKPVKTLTPSPSLIG*
Ga0137416_105614141	3300012927	Vadose Zone Soil	VAKSGGQRAGTTKGIFGLHVTNGIIGTFSINSTGDTDLGAITIYKQSGKKLIPIKTLIPSASLTGA*
Ga0137404_119246171	3300012929	Vadose Zone Soil	GDRAKTTKAIFGISITNGIIGNFTINATGDTNLIPITIYKQAGKNLIPQKTLIPSASLIGG*
Ga0137407_105785521	3300012930	Vadose Zone Soil	SFGKSIGASPNPYSQYGAQAMQVLLQAVAAGGGDRAKTTKAIFGISITNVIIGNFTINATGDTNLIPITIYKQAGKNLIPQKTLIPSASLIGG*
Ga0153915_124155662	3300012931	Freshwater Wetlands	AIFVKSFGKQIGTEPNPYSQYGAQAMQVLLKAVAAGGGDRAKTTKAIFGITITNGIIGNFTINATGDTNLIPITIYKQAGKKLVPVKTLIPSASLIGG*
Ga0153915_129582451	3300012931	Freshwater Wetlands	MQVLLQAVAAGGGDRAKTTKAIFGISITNGIIGNFTINSTGDTNLTPITIYKQAGKKLVPVKTLIPSASLIGG*
Ga0164300_108949541	3300012951	Soil	AMLVMLQAVAAHGGDRAAVTRSSLGITINNGILGNFTISKTGDTNLVPITVYRQAGKKLIPVKTITPPASIIG*
Ga0164298_100439621	3300012955	Soil	KSFGKQIGTEPNPYSQYGAQAMQVLLQAVASGGGDRARTTKAIFGIKITNGIIGNFTINSTGDTNLTPITIYKQVGKKLVPQKTIIPAANLVG*
Ga0164299_111320232	3300012958	Soil	LKAVAAGGGDRAKTTKAIFGINITGGIIGNFSINATGDTNLTPITIYKQVGKKLVPQKTLIPAANLIG*
Ga0164299_116979341	3300012958	Soil	RSIGAVPNPYAAYGAQAMLVMLQAVAAHGGDRAAVTRSILGITINNGILGNFTISKTGDTNLVPITVYRQAGKKLIPVKTITPPASIIG*
Ga0164301_110347451	3300012960	Soil	YSQYGAQAMQVMLQAAAAGGGDRAKTTKAIFGIQITNGIIGNFSINSTGDINLTPITIYKQVGKKLVPQKTLIPAANLIG*
Ga0164302_114941632	3300012961	Soil	LQAVASGGGDRARTTKAIFGIKITNGIIGNFTINSTGDTNLTPITIYKQVGKKLVPQKTIIPAANLVG*
Ga0164307_104011381	3300012987	Soil	QYGAQAMQVLLQAVASGGGDRARTTKAIFGIKITNGIIGNFTINSTGDTNLTPITIYKQVGKKLVPQKTIIPAANLVG*
Ga0157369_114605571	3300013105	Corn Rhizosphere	GKGDRAKTTSSLFGTTIKNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG*
Ga0120172_10213043	3300013765	Permafrost	QAMQVMLQAVAAGGGDRAKTTKAIFGIKITNGIIGNFSINSTGDINLTPITIYKQAGKKLIPQKTIIPAANLVGGP*
Ga0120158_104448281	3300013772	Permafrost	PNPYAAYGAQAMLVMLQAVAAGGGSRAATTKAIFGIKITNGILGNFTINATGDTNLTPITIYKQAGKNLIPVKTLVPSASLIGG*
Ga0134081_101928442	3300014150	Grasslands Soil	VAAGGGDRAKTNKAVFGLSITGGIIGNFTINATGDTNLTPITIYKQVGKKLVPQKTLIPAANLVG*
Ga0132255_1038999252	3300015374	Arabidopsis Rhizosphere	KSIGTTPNPYAAYGAQAMLVMLQAVAKGGSDRAALTRNITNVSITNGVLGNFTINSTGDTNLNPVTVYRQAGKKLIPVKTITPDASLIG*
Ga0134069_13949541	3300017654	Grasslands Soil	QAMLVMLQAVARGAGDRAKTTKAIFGLTVTNGILGNFTIDATGDTNLKPITIYVQKGKELKPVKTLVPSASLVGG
Ga0187824_102595691	3300017927	Freshwater Sediment	GGGQRATTTKSVFGLTVNNGVLGTFTINSSGDTNLTPITIYKEAGKNLNPVKTLVPGASLIGG
Ga0187821_100689802	3300017936	Freshwater Sediment	PNPYAAYGAQAMDVALLAIAKGGGQRATTTKSVFGLTVNNGVLGTFTINSSGDTNLTPITIYKEAGKNLNPVKTLVPGASLIGG
Ga0187778_113121302	3300017961	Tropical Peatland	AAYGAQAMQVMLLAVAKGGGQRAATTKSVFGLNVTNGVLGNFTINSSGDTNALAITIYKQAGKNLNPVKTLVPAASLIGG
Ga0187822_101389541	3300017994	Freshwater Sediment	AQAMDVALLAIAKGGGQRATTTKSVFGLTVNNGVLGTFTINSSGDTNLTPITIYKEAGKNLNPVKTLVPGASLIGG
Ga0187882_10953731	3300018021	Peatland	LQAISVGGGQRSTTTKALFGLHVPNGILGSFTIGASGDTDLTPVTIYKQKGKALVPAKTLVPSASLVG
Ga0187788_104562662	3300018032	Tropical Peatland	YGAQAMDVALLAVAKGGGQRAATTKSVFGMTVTGGILGNFTINTTGDTNLTPITIYKQVGKNLVPVKTLVPSASLIG
Ga0066655_112169771	3300018431	Grasslands Soil	AQAMLVALQAVAAKGGDRAGITRTVFGLHITNGVLGNFSINKSGDTDALAITVYQQHGKILTPVKTLTPSASLIGG
Ga0193751_12029052	3300019888	Soil	KQIGTDPNPYSQYGAQAMQVMLQAVAAGGGDRAKTTKAIFGIQISNGIIGNFSINSSGDINLTPITIYKQVGKKLVPQKTIIPAANLVGGP
Ga0193718_10909542	3300019999	Soil	MQVMLQAVAAGGGDRAKTTKAIFGITITNGIIGNFTINATGDTNLIPITIYKQAGKNLIPVKTLIPSPSLIGG
Ga0193724_11206981	3300020062	Soil	FGKSVGAVPNPYAAYGAQAMLVMLQAIAKGGGDRAKTTSGLFGLTVTNGILGNFTINATGDTNLTQITIYKQNGKNLIPVKTLVPGANIIG
Ga0179596_104420141	3300021086	Vadose Zone Soil	QVMLQAVATGAGDRAKTTKAIFGINISNGIIGNFSINATGDINLTPITIYKQAGKNLVPVKTLIPPASLVGG
Ga0222729_10592842	3300022507	Soil	ASLTGQGATFVKSFGKQIGTAPNPYAQYGAQAMQVMLQAVAAGSGDRAKTTKAIFGINITNGIIGNFSINASGDTNLTPITIYKQSGKTLVPVKTLIPAANLVGGP
Ga0179591_11581081	3300024347	Vadose Zone Soil	KTTKAIFGIQITNGIIGNFSINSTGDINLTPITIYKQVGKKLVPQKTLIPAANLVGGP
Ga0208456_10768301	3300025441	Peatland	SVGGGQRSTTTKALFGLHVPNGILGSFTIGASGDTDLTPVTIYKQKGKALVPAKTLVPSASLVG
Ga0208037_10170871	3300025448	Peatland	AQAMEVMLQAISVGGGQRSTTTKALFGLHVPNGILGSFTIGASGDTDLTPVTIYKQKGKALVPAKTLVPSASLVG
Ga0207699_112678422	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AMQAVGAHPGDRAAITKTVFGLHISGGVLGNFTIGANGDTDALAVTIYRQAGKQLIPVKTLVPSSNLIG
Ga0207705_109949091	3300025909	Corn Rhizosphere	PYAAYGAQAMLLMLQAVTTGKGDRAKTTSSLFGTTITNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG
Ga0207684_115091852	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	FGKQLGTSVNPYAAYGAEAMEVMLKVIAKSGGQRANVTKGLFGLSITNGILGNFTINNQGDTSLQPITIYRQSGKNLNPVKTIVPAASLT
Ga0207707_100375911	3300025912	Corn Rhizosphere	FVKSFGKQIGTTPNPYAAYGAQAMLLMLQAVTAGKGDRAKTTSSLFGTTITNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG
Ga0207652_112489682	3300025921	Corn Rhizosphere	GIHGGDRAAVTRSIFGLRINNGVLGSFTINSSGDTSLTPITIYKQQGKILKPVKTLIPPASLIG
Ga0207700_104918232	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PYAAYGAQAMLVAMQAVGAHPGDRAAITKTVFGLHISGGVLGNFTIGANGDTDALAITIYKQAGKQLLPVKTLVPSASLLGG
Ga0207664_100479621	3300025929	Agricultural Soil	GTTPNPYSAYGAQAMDVALQAIAKGGGQRAATTKQVFGITITNGILGNFTINSTGDTNNLAITIYKQAGKNLNPVKTLTPQSTLIGG
Ga0207664_113000881	3300025929	Agricultural Soil	ATFVKSFGKSIGTTPNPYAAYGAQAMLVALQAVGAHPGDRAAITKTVFGLHISGGVLGNFTIGANGDTDALAVTIYKQAGKNLVPVKTLVPSANLIG
Ga0207690_109921982	3300025932	Corn Rhizosphere	SFGKQIGTTPNPYAAYGAQAMLLMLQAVAAGNGDRAKTTKAIFGIHITNGILGDFTINAAGDTNLAPITIYRQAGKALKPVKTITPDPSLIG
Ga0207661_116131681	3300025944	Corn Rhizosphere	PYAAYGAQAMLLMLQAVTAGKGDRAKTTSSLFGTTITNGILGNFTINAAGDTNLAPITVYKQVGKALKPLKTITPDASLIG
Ga0207702_120484611	3300026078	Corn Rhizosphere	FGKSIGAVPNPYAAYGAQAMLVALQAVAAHGGDRAAITRTVFGLHVTGGVLGNFTIGANGDTDALAVTIYKQAGKALIPVKTLVPSANLLG
Ga0209154_10862742	3300026317	Soil	GGGDRAKTNKAVFGLSITGGIIGNFTINATGDTNLTPITIYKQVGKKLVPQKTLIPAANLVG
Ga0208984_11034951	3300027546	Forest Soil	GAVANGAYISVAGQPPKSLTGQGATFVKSFGKQIGTEPNPYSQYGAQAMQVMLQAVATGGGDRAKTTKAIFGITITNGIIGNFTINASGDINLTPITIYKQSGKKLIPQKTLIPAANLVGGP
Ga0209701_104598561	3300027862	Vadose Zone Soil	VKSFGKQIGTAPNPYAQYGAQAMQVMLQAVAAGGGDRAKTTKSIFGISITNGIIGNFTINASGDTNLTPITIYKQSGKTLVPVKTLIPAANLVGGP
Ga0265322_102367122	3300028654	Rhizosphere	GTTPNPYAAYGAQSMLVMLQAVAAGGGDRAKTTKSIFGITITNGILGNFTINAAGDTNLTPITIYKQAGKNLNPVKTLVPTASLIG
Ga0307292_102551341	3300028811	Soil	FGKQVGATPNPYSAYGAQAMLVMLQAVASGAGDRAKTTKAIFGLTVTDGILGNFTIDATGDTNLKPITIYVQKGKELKPVKTLVPSASLVGG
Ga0308199_11466402	3300031094	Soil	GTEPNPYSQYGAQAMQVVLQAVAAGGGDRAKTTKAIFGITITGGIIGNFSINASGDTNLTPITIYKQVGKKLVPQKTLIPPPSLIGGA
Ga0265325_101339571	3300031241	Rhizosphere	AAYGAQSMLVMLQAVAAGGGDRAKTTKSIFGITITNGILGNFTINAAGDTNLTPITIYKQAGKNLNPVKTLVPTASLIG
Ga0265327_104292452	3300031251	Rhizosphere	YAAYGAQAMQVMLQAIAKGGGQRAATTKSVFGLNVTNGVLGNFTVNSSGDTNALAITIYKQAGKNLNPVKTLVPTASLIGG
Ga0307472_1017376221	3300032205	Hardwood Forest Soil	KSFGKQIGTAPNPYAQYGAQAMQVMLQAVAAGAGDRAKTTKAIFGISITNGIIGNFTINSSGDTNLTPITIYKQSGKSLVPVKTIIPAANLVGGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057191

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences