Metagenome / Metatranscriptome Family F066982

Basic Information
Family ID	F066982
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	46 residues
Representative Sequence	MIYTGYSMDPQTFEASPIEEMDPIECPACHQTHRWSKKDARFERDPNE
Number of Associated Samples	108
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	37.30 %
% of genes near scaffold ends (potentially truncated)	42.86 %
% of genes from short scaffolds (< 2000 bps)	73.02 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (99.206 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.635 % of family members)
Environment Ontology (ENVO)	Unclassified (39.683 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.444 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.16% β-sheet: 7.89% Coil/Unstructured: 78.95%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00571	CBS	6.35
PF02633	Creatininase	3.97
PF11074	DUF2779	3.97
PF02518	HATPase_c	3.17
PF11329	DUF3131	2.38
PF07732	Cu-oxidase_3	2.38
PF00248	Aldo_ket_red	1.59
PF13091	PLDc_2	1.59
PF01432	Peptidase_M3	1.59
PF00072	Response_reg	0.79
PF00672	HAMP	0.79
PF13493	DUF4118	0.79
PF05635	23S_rRNA_IVP	0.79
PF14322	SusD-like_3	0.79
PF10518	TAT_signal	0.79
PF14342	DUF4396	0.79
PF00069	Pkinase	0.79
PF00355	Rieske	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	3.97
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.17
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	2.38
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	1.59
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	1.59

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.21 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	80.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.59 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	80.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	80.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	80.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	80.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %
Unclassified	root	N/A	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_99891_len_12829_cov_15_743394	All Organisms → cellular organisms → Bacteria	12879	Open in IMG/M
2124908029\|A2_v1_NODE_41704_len_594_cov_6_269360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	644	Open in IMG/M
2140918006\|ConsensusfromContig62151	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	726	Open in IMG/M
2140918007\|ConsensusfromContig151183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2237	Open in IMG/M
2140918007\|ConsensusfromContig31470	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1242	Open in IMG/M
2162886012\|MBSR1b_contig_1382380	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2909	Open in IMG/M
3300001305\|C688J14111_10265468	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300001535\|A3PFW1_10327525	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300001664\|P5cmW16_1038963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	860	Open in IMG/M
3300001686\|C688J18823_10018672	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4646	Open in IMG/M
3300001686\|C688J18823_11003135	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300004114\|Ga0062593_100035798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2902	Open in IMG/M
3300004153\|Ga0063455_100762969	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	663	Open in IMG/M
3300004157\|Ga0062590_100347633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1185	Open in IMG/M
3300004643\|Ga0062591_100836658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300005179\|Ga0066684_10460147	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	855	Open in IMG/M
3300005179\|Ga0066684_10776249	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	635	Open in IMG/M
3300005187\|Ga0066675_10269555	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1222	Open in IMG/M
3300005336\|Ga0070680_100001480	All Organisms → cellular organisms → Bacteria	17062	Open in IMG/M
3300005450\|Ga0066682_10841882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300005457\|Ga0070662_101386676	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	605	Open in IMG/M
3300005458\|Ga0070681_10118075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2589	Open in IMG/M
3300005458\|Ga0070681_10479307	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1157	Open in IMG/M
3300005563\|Ga0068855_102118259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300005566\|Ga0066693_10095073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1068	Open in IMG/M
3300005578\|Ga0068854_100574438	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	959	Open in IMG/M
3300005578\|Ga0068854_101759090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	568	Open in IMG/M
3300005616\|Ga0068852_101870800	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300005896\|Ga0075282_1037916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	668	Open in IMG/M
3300005938\|Ga0066795_10024349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1738	Open in IMG/M
3300005938\|Ga0066795_10130751	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	748	Open in IMG/M
3300005938\|Ga0066795_10136485	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	731	Open in IMG/M
3300005947\|Ga0066794_10115593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	804	Open in IMG/M
3300006046\|Ga0066652_100423960	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1218	Open in IMG/M
3300006055\|Ga0097691_1000321	All Organisms → cellular organisms → Bacteria	43666	Open in IMG/M
3300006175\|Ga0070712_100883622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	770	Open in IMG/M
3300006797\|Ga0066659_11008368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	696	Open in IMG/M
3300006864\|Ga0066797_1065181	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1279	Open in IMG/M
3300006881\|Ga0068865_100548882	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	970	Open in IMG/M
3300006894\|Ga0079215_10908826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300006903\|Ga0075426_10494042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	909	Open in IMG/M
3300007265\|Ga0099794_10439790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	683	Open in IMG/M
3300009012\|Ga0066710_100524454	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300009012\|Ga0066710_102849754	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	681	Open in IMG/M
3300009029\|Ga0066793_10197345	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1172	Open in IMG/M
3300009093\|Ga0105240_10054889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4991	Open in IMG/M
3300009143\|Ga0099792_10017360	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3149	Open in IMG/M
3300009143\|Ga0099792_11030014	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300009147\|Ga0114129_10049008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5937	Open in IMG/M
3300009148\|Ga0105243_12306709	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300010227\|Ga0136219_1001158	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3548	Open in IMG/M
3300010320\|Ga0134109_10065368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1224	Open in IMG/M
3300010322\|Ga0134084_10301092	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	596	Open in IMG/M
3300010371\|Ga0134125_12056964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	621	Open in IMG/M
3300010373\|Ga0134128_12312609	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	592	Open in IMG/M
3300010399\|Ga0134127_10130220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2254	Open in IMG/M
3300011332\|Ga0126317_10975572	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	792	Open in IMG/M
3300011444\|Ga0137463_1047989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1587	Open in IMG/M
3300011444\|Ga0137463_1075275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1265	Open in IMG/M
3300011998\|Ga0120114_1003009	All Organisms → cellular organisms → Bacteria	4579	Open in IMG/M
3300012201\|Ga0137365_10664154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	763	Open in IMG/M
3300012203\|Ga0137399_11029009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	693	Open in IMG/M
3300012208\|Ga0137376_10200904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1724	Open in IMG/M
3300012211\|Ga0137377_10023674	All Organisms → cellular organisms → Bacteria → Proteobacteria	5472	Open in IMG/M
3300012285\|Ga0137370_10308340	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	946	Open in IMG/M
3300012469\|Ga0150984_109431812	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300012927\|Ga0137416_10408998	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300012930\|Ga0137407_11684790	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300012951\|Ga0164300_11049008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	528	Open in IMG/M
3300012955\|Ga0164298_10646315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	734	Open in IMG/M
3300012955\|Ga0164298_11281725	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300012958\|Ga0164299_10774195	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	681	Open in IMG/M
3300012960\|Ga0164301_10640742	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	791	Open in IMG/M
3300012985\|Ga0164308_11001306	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300013100\|Ga0157373_10051772	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2923	Open in IMG/M
3300013102\|Ga0157371_10443986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	953	Open in IMG/M
3300014056\|Ga0120125_1068043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	801	Open in IMG/M
3300014745\|Ga0157377_10855385	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	676	Open in IMG/M
3300014829\|Ga0120104_1120996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300015084\|Ga0167654_1021153	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300015192\|Ga0167646_1011475	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2432	Open in IMG/M
3300015192\|Ga0167646_1030361	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1325	Open in IMG/M
3300015371\|Ga0132258_13375211	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1097	Open in IMG/M
3300015373\|Ga0132257_100340934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1810	Open in IMG/M
3300018056\|Ga0184623_10170021	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1006	Open in IMG/M
3300018482\|Ga0066669_10030493	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3178	Open in IMG/M
3300019879\|Ga0193723_1028355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1695	Open in IMG/M
3300019881\|Ga0193707_1001258	All Organisms → cellular organisms → Bacteria	9202	Open in IMG/M
3300019881\|Ga0193707_1107506	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	826	Open in IMG/M
3300019890\|Ga0193728_1002413	All Organisms → cellular organisms → Bacteria	9596	Open in IMG/M
3300020004\|Ga0193755_1037957	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1585	Open in IMG/M
3300020006\|Ga0193735_1002878	All Organisms → cellular organisms → Bacteria	5559	Open in IMG/M
3300020021\|Ga0193726_1011196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4812	Open in IMG/M
3300020021\|Ga0193726_1043612	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2166	Open in IMG/M
3300020022\|Ga0193733_1091842	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	849	Open in IMG/M
3300020060\|Ga0193717_1043902	Not Available	1630	Open in IMG/M
3300020061\|Ga0193716_1004581	All Organisms → cellular organisms → Bacteria → Proteobacteria	7427	Open in IMG/M
3300021339\|Ga0193706_1213583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300021363\|Ga0193699_10117742	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300021408\|Ga0193708_1015030	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1878	Open in IMG/M
3300021411\|Ga0193709_1005155	All Organisms → cellular organisms → Bacteria	3355	Open in IMG/M
3300021411\|Ga0193709_1097421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	635	Open in IMG/M
3300022756\|Ga0222622_10494442	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	873	Open in IMG/M
3300025505\|Ga0207929_1000225	All Organisms → cellular organisms → Bacteria	16005	Open in IMG/M
3300025912\|Ga0207707_10031676	All Organisms → cellular organisms → Bacteria	4628	Open in IMG/M
3300025912\|Ga0207707_10652532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	887	Open in IMG/M
3300025917\|Ga0207660_10017723	All Organisms → cellular organisms → Bacteria	4737	Open in IMG/M
3300025919\|Ga0207657_10674605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	804	Open in IMG/M
3300025939\|Ga0207665_10686615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300025949\|Ga0207667_11611246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	618	Open in IMG/M
3300025981\|Ga0207640_12112026	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300026271\|Ga0209880_1020928	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1605	Open in IMG/M
3300026271\|Ga0209880_1075826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	704	Open in IMG/M
3300026271\|Ga0209880_1089485	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	633	Open in IMG/M
3300026316\|Ga0209155_1022440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2629	Open in IMG/M
3300027565\|Ga0209219_1008736	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2294	Open in IMG/M
3300027903\|Ga0209488_10036930	All Organisms → cellular organisms → Bacteria	3572	Open in IMG/M
3300028536\|Ga0137415_10057107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3770	Open in IMG/M
3300028824\|Ga0307310_10057472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1640	Open in IMG/M
3300028828\|Ga0307312_10292195	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1060	Open in IMG/M
3300030510\|Ga0268243_1169237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300031716\|Ga0310813_10097159	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2282	Open in IMG/M
3300031720\|Ga0307469_10039912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2839	Open in IMG/M
3300032002\|Ga0307416_101106383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	897	Open in IMG/M
3300033412\|Ga0310810_10319545	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300034820\|Ga0373959_0068962	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	796	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.75%
Host-Associated	Host-Associated	17.46%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.78%
Plants	Host-Associated → Plants	17.46%
Aquatic	Environmental → Aquatic	3.97%
Lab Enrichment	Engineered → Lab Enrichment	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.94%
Sediment	Environmental → Aquatic → Sediment	3.17%
Freshwater	Environmental → Aquatic → Freshwater	0.79%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.73%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.30%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.94%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	6.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.38%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.38%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.59%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.59%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.79%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908029	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005896	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010227	Soil microbial communities from Bangor area, North Wales, UK, treated with sorgoleone, replicate 2	Engineered	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015084	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5a, rocky medial moraine)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020060	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c2	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021408	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c1	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066982

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_00294030	2088090008	Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQTHRWNKRDARFERDPNE
A2_v1_00267570	2124908029	Soil	PQTFDASPIEEMDPVECPACHQMHRWNKKDARFERDPNE
P1_C_00124110	2140918006	Soil	MIYTGFSMDPQTFEASPIEEMDPVECPACHQTHRWNKRDARFERDPNE
A_all_C_00328410	2140918007	Soil	MIYTGFSMDPQTFDASPIEEMDPVECPACHQMHRWNKKDARFERDPNE
A_all_C_01459770	2140918007	Soil	MIYTGFSMDPQTFEDSPIEQMDPVECPACRQMHRWNKKDARFERDPNE
MBSR1b_0235.00005960	2162886012	Miscanthus Rhizosphere	MIYTGFSMDPLTFEASPIEEMDPIVCPACHKTHKWSKKDARFERDPNE
C688J14111_102654682	3300001305	Soil	GKMIYTGYSMDPQTFEASPIEEMDPIECPACHQTHRWSKKDARFERDPNE*
A3PFW1_103275251	3300001535	Permafrost	FEASPIEEMDPIECPACHQTHRWNKRDARFERDPNE*
P5cmW16_10389633	3300001664	Permafrost	MIYTGFSMDPQTFEASPIEEMDPIICPACHQTHKWSKKDARFERDPNE*
C688J18823_100186722	3300001686	Soil	MIYTGYSMDPQTFEASPIEEMDPIECPACHQTHRWSKKDARFERDPNE*
C688J18823_110031352	3300001686	Soil	MIYTGYSMDPIIFEASPIEEMDPVECPACHQTHRWSKRDARFERDPNE*
Ga0062593_1000357984	3300004114	Soil	MIYTGYAMDPQTFEASPIEEMDPIECPACHQVHRWTKRDARFERDPNE*
Ga0063455_1007629692	3300004153	Soil	MIYTGYSMDPQTFDASPIEEMDPIQCPACRQVHSWSKRDARFERDPNE*
Ga0062590_1003476332	3300004157	Soil	MDPATFDASPVEENPIECPVCKQTHRWSKKDAFLERDDSAERAH*
Ga0062591_1008366581	3300004643	Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHKTHRWSKKDARFERDPNE*
Ga0066684_104601473	3300005179	Soil	MIYTGYSMDPQTFEASPIEEMDPIECPACHQMHRWSKRDARFERDPNE*
Ga0066684_107762493	3300005179	Soil	KMIYTGYSMDPAIFEASPIEEMDPVVCPACHQTHRWSKRDARFERDPNE*
Ga0066675_102695551	3300005187	Soil	MIYTGYSMDPAIFEASPIEEMDPVVCPACHQTHRWSKRDARFERDPNE*
Ga0070680_1000014807	3300005336	Corn Rhizosphere	MIYTGYAMDPLTFEASPIEEMDPIECPACHQLHHWTKKDARFERDPNE*
Ga0066682_108418821	3300005450	Soil	MIYTGYSMDPQTFEASPIEEMDPIECPACHQMHRWTKRDARFERDPNE*
Ga0070662_1013866762	3300005457	Corn Rhizosphere	GYSMDPQTFELSPIEEMDPVECPACHQTHRWTKRQALFERDPNE*
Ga0070681_101180753	3300005458	Corn Rhizosphere	MIYTGYSMDPAIFEASPIEEMDPIQCPVCHQTHRWTKRDARFERDPNE*
Ga0070681_104793071	3300005458	Corn Rhizosphere	DPQTFEASPIEEMDPIQCPACHQVHAWSKRDARFERDPNE*
Ga0068855_1021182591	3300005563	Corn Rhizosphere	FEASPIEEMDPIECPACHQLHHWTKKDARFERDPNE*
Ga0066693_100950731	3300005566	Soil	GYSMDPAIFEASPIEEMDPVVCPACHQTHRWSKRDARFERDPNE*
Ga0068854_1005744382	3300005578	Corn Rhizosphere	MIYTGYAMDPQTFEASPIEEMDPIECPACHQVHRWTKRDARFEREPNE*
Ga0068854_1017590901	3300005578	Corn Rhizosphere	YTGFSMDPLTFEASPIEEMDPIVCPACHKTHKWSKKDARFERDPNE*
Ga0068852_1018708001	3300005616	Corn Rhizosphere	ASPIEEMDPIECPACHQVHRWTKRDARFERDPNE*
Ga0075282_10379161	3300005896	Rice Paddy Soil	MIYTGYAMDPQTFEASPIEEMDPIECPACHQIHRWT
Ga0066795_100243493	3300005938	Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQTHRWNKRDA
Ga0066795_101307513	3300005938	Soil	TGKMIYTGFSMDPQTFDASPIEEMDPVECPACHQMHRWSKKDARFERDPNE*
Ga0066795_101364852	3300005938	Soil	TGKMIYTGFSMDPQTFDASPIEEMDPVECPACHQMHRWSKADARFERDPNE*
Ga0066794_101155931	3300005947	Soil	MIYTGFSMDPQTFEDSPIEEMDPVECSACHQMHRWNKKDARFERDPNE*
Ga0066652_1004239603	3300006046	Soil	TGKMIYTGYSMDPAIFEASPIEEMDPVVCPACHQTHRWSKRDARFERDPNE*
Ga0097691_100032125	3300006055	Arctic Peat Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQTHRWNKRDARFERDPNE*
Ga0070712_1008836223	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TFEASPIEEMDPIECPACHQTHRWSKRDARFERDPNE*
Ga0066659_110083683	3300006797	Soil	TFEASPIDEMDPIECPACHQTHRWTKRDARFERDPNE*
Ga0066797_10651812	3300006864	Soil	MIYTGFSMDPQTFDASPIEEMDPVECPACHQMHRWSKKDARFERDPNE*
Ga0068865_1005488821	3300006881	Miscanthus Rhizosphere	MIYTGYSMDPQTFDLSPIEEMDPVECPACHQVHRWSKRDARFERDPNE*
Ga0079215_109088262	3300006894	Agricultural Soil	MDQATFTASPIEQMDPIECPACHKMHRWAKKDALFEREDPKENRR*
Ga0075426_104940421	3300006903	Populus Rhizosphere	FELSPIEEMDPVECPACHQTHRWTKKQALFERDPNE*
Ga0099794_104397901	3300007265	Vadose Zone Soil	MIYTGFSMDPQTFEASPIEEMDPVQCPACRQLHRWTKKDARFERDPNE*
Ga0066710_1005244541	3300009012	Grasslands Soil	TTGKMIYTGYSMDPQTFEASPIEEMDPIECPACHQTHRWTKRDARFERDPNE
Ga0066710_1028497541	3300009012	Grasslands Soil	TFEASPIEEMDPIECPACHQTHRWTKRDARFERDPNE
Ga0066793_101973453	3300009029	Prmafrost Soil	MIYTGFSMDPQTFDASPIEEMDPVECPACHQMHRWSKADARFERDPNE*
Ga0105240_100548896	3300009093	Corn Rhizosphere	MIYTGFSMDPLTFEASPIEEMDPIVCPACHKTHKWSKKDARFERDPNE*
Ga0099792_100173601	3300009143	Vadose Zone Soil	MIYTGFSMDPQTFEASPIEEMDPIVCPACHQTHKWSKKDA
Ga0099792_110300141	3300009143	Vadose Zone Soil	MIYTGFSMDPQTFEASPIEEMDPIVCPACHQTHKWSKKDARFERDPNE*
Ga0114129_100490084	3300009147	Populus Rhizosphere	MVYTGYSMDPQTFELSPIEEMDPVVCPACHQTHRWTKKQALFERDPNE*
Ga0105243_123067091	3300009148	Miscanthus Rhizosphere	QTFEASPIEEMDPIPCPACHQTHRWTKKDALFKRDPNE*
Ga0136219_10011584	3300010227	Soil	MIYTGYAMDPQTFEASPIEEMDPIECPACHQIHRWTKRDARFERDPNE*
Ga0134109_100653682	3300010320	Grasslands Soil	MIYTGYSMDPQTFEASPIEEMDPIECPACHQTHRWTKRDARFERDPNE*
Ga0134084_103010922	3300010322	Grasslands Soil	MDPQTFELSPIEEMDPVECPACHQMHRWTKKQALFERDPNE*
Ga0134125_120569642	3300010371	Terrestrial Soil	MIYTGYSMDPQTFEASPIEEMDPIQCPACHQVHSWSKRDARFERDPNE*
Ga0134128_123126091	3300010373	Terrestrial Soil	IKCPNTGKMIYTGYSMDPQTFELSPIEEMDPVECPACHQMHRWTKRQALFERDPNE*
Ga0134127_101302202	3300010399	Terrestrial Soil	MIYTGYSMDPQTFEASPIEEMDPIQCPACHQVHAWSKRDARFERDPNE*
Ga0126317_109755721	3300011332	Soil	IKCPNTGKMIYTGFSMDPLIFEASPVEEMDPIECPACHQTHRWSKKDSRFERDPNE*
Ga0137463_10479892	3300011444	Soil	MIYTGFSMDPSTFDASPIEEMDPIECPACHQMHRWSKKDARFERDPNE*
Ga0137463_10752752	3300011444	Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQTHKWNKRDARFERDPNE*
Ga0120114_10030091	3300011998	Permafrost	TGFSMDPQTFEASPIEEMDPIECPACHQTHRWNKRDARFERDPNE*
Ga0137365_106641542	3300012201	Vadose Zone Soil	MIYTGYSMDPQTFEASPIEEMDPIQCPACHQTHRWTKRDARFERDPNE*
Ga0137399_110290092	3300012203	Vadose Zone Soil	MIYTGYSMDPETFEGSPIEEMDPVECPACHQVHRWSKRDARFERDPNE*
Ga0137376_102009042	3300012208	Vadose Zone Soil	MIYTGYSMDPQTFEASPIEEMDPIECPACHQVHRWSKRDARFERDPNE*
Ga0137377_100236743	3300012211	Vadose Zone Soil	MIYTGYSMDPQTFDASPIEEMDPIECPACHQTHRWSKRDARFERDPNE*
Ga0137370_103083403	3300012285	Vadose Zone Soil	MIYTGYSMDPQTFELSPIEEMDPVECPACHQTHRWTKRQALFERDPNE*
Ga0150984_1094318121	3300012469	Avena Fatua Rhizosphere	ASPIEEMDPIECPACHQVHAWSKRDARFERDPNE*
Ga0137416_104089983	3300012927	Vadose Zone Soil	YSMDPQTFEASPIEEMDPIQCPACHQMHRWSKREARFERDPNE*
Ga0137407_116847902	3300012930	Vadose Zone Soil	YTGYSMDPQTFEASPIEEMDPIECPACHQTHRWSKRDARFERDPNE*
Ga0164300_110490081	3300012951	Soil	MIYTGYSMDPQTFELSPIEEMDPVVCPACHQTHRWTKKQALFERDPNE*
Ga0164298_106463152	3300012955	Soil	MIYTGYSMDPAIFEASPIEEMDPIVCPACRQTHTWTNKDA
Ga0164298_112817251	3300012955	Soil	ATGKMIYTGYSMDPAIFEASPIEEMDPIECPACRQTHTWTKKDARFERDPNE*
Ga0164299_107741951	3300012958	Soil	MIYTGYSMDPQTFELSPIEEMDPVECPACHQMHRWTKRQALFERDPNE*
Ga0164301_106407422	3300012960	Soil	MIYTGYSMDPAIFEASPIEEMDPIVCPACRQTHTWTKKDARFERDPNE*
Ga0164308_110013062	3300012985	Soil	MIYTGYSMDPQTFEAAPIEEMDPIQCPACHQVHAWSKRDARFERDPNE*
Ga0157373_100517725	3300013100	Corn Rhizosphere	MIYTGYAMDPQTFEASPIEEMDPIECPACHQVHRWTKRDARF
Ga0157371_104439862	3300013102	Corn Rhizosphere	QTFELSPIEEMDPVECPACHQVHRWSKRDARFERDPNE*
Ga0120125_10680432	3300014056	Permafrost	MIYTGFSMDPQTFEASPIEEMDPIVCPACHQTHRWSKKDARFERDPNE*
Ga0157377_108553852	3300014745	Miscanthus Rhizosphere	EPEVLHTWALSPIEEMDPVECPACHQVHRWSKRDARFERDPNE*
Ga0120104_11209961	3300014829	Permafrost	QTFEASPIEEMDPIICPACHQTHKWSKKDARFERDPNE*
Ga0167654_10211532	3300015084	Glacier Forefield Soil	MIYTGYSMDPTTFGAIPIEQMDPIECPACKRMHRWGKKDALFEREDPKEGEKKAK*
Ga0167646_10114752	3300015192	Glacier Forefield Soil	MIYTGFSMDPQTFDASPIEEMDPIECPACHQMHRWSKKDARFERDPNE*
Ga0167646_10303612	3300015192	Glacier Forefield Soil	MIYTGFSMDPQTFEASPIEEMDPVECPACHQTHRWNKRDARFERDPNE*
Ga0132258_133752112	3300015371	Arabidopsis Rhizosphere	DPETFELSPIEEMDPVECPACHQVHRWSKRDARFERDPNE*
Ga0132257_1003409343	3300015373	Arabidopsis Rhizosphere	MIYTGYSMDPQTFEASPIEEMDPIQCPACHQVHAWSKRDA
Ga0184623_101700213	3300018056	Groundwater Sediment	VNRIFIKCPTTGKLVYTGFEMDQDTFTAIPIEQMDPIECPACHEMHRWAKKDALFEREDPKERSR
Ga0066669_100304935	3300018482	Grasslands Soil	CPNTGKMIYTGYSMDPAIFEASPVEEMDPIECPACRQTHRWSKRDARFERDPNE
Ga0193723_10283552	3300019879	Soil	MIYTGFSMDPITFDAAPIEEMDPIECPACHKMHRWTKKDARFERDPNE
Ga0193707_10012584	3300019881	Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQMHRWNKRDARFERDPNE
Ga0193707_11075062	3300019881	Soil	MIYTGFSMDPITFDASPIEEMDPIECPACHKMHRWTKKDALFERDPNE
Ga0193728_10024139	3300019890	Soil	MIYTGFSMDPLTFEASPIEEMDPIVCPACHQTHKWSKKDARFERDPNE
Ga0193755_10379573	3300020004	Soil	YTGFAMDPETFGALPIEEMDPLECPACHKIHRWQKKDALFEREDPRAAS
Ga0193735_10028786	3300020006	Soil	MIYTGFSMDPQTFEASPIEEMDPIVCPACHQTHKWSKKDARFERDPNE
Ga0193726_10111964	3300020021	Soil	MIYTGFSMDPATFDAAPIEEMDPVECPACHQTHRWTKKDARFERDPNE
Ga0193726_10436123	3300020021	Soil	MIYTGFSMDPITFDASPIEEMDPIECPACHKMHRWTKKDARFERDPNE
Ga0193733_10918422	3300020022	Soil	MIYTGFSMDPQIFEASPIEEMDPIVCPACHQTHRWSKKDARFERDPNE
Ga0193717_10439021	3300020060	Soil	GFAMDQATFGALPIEEMDPIECPACHKMHRWAKKDALFEREDPQSK
Ga0193716_10045811	3300020061	Soil	MIYTGFSMDPQTFEASPIEEMDPVECPACHQMHRWSKKDARFERDPNE
Ga0193706_12135831	3300021339	Soil	MIYTGFSMDPQTFDASPIEEMDPVECPACHQTHRWSKKDARFERDPNE
Ga0193699_101177423	3300021363	Soil	YTGFSMDPQTFEASPIEEMDPIECPACHQTHRWSKKDARFERDPNE
Ga0193708_10150303	3300021408	Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQTHRWSKKDARFERDPNE
Ga0193709_10051551	3300021411	Soil	PTTGKMIYTGFSMDPQTFEASPIEEMDPIECPACHQTHRWSKKDARFERDPNE
Ga0193709_10974212	3300021411	Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQTHRWSKKDARFERD
Ga0222622_104944423	3300022756	Groundwater Sediment	GKLIYTGFAMDPETFGALPIEEMDPLECPACHKVHRWQKKDALFEREDPRAAS
Ga0207929_100022510	3300025505	Arctic Peat Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQPHRWNKRDARFERDPNE
Ga0207707_100316762	3300025912	Corn Rhizosphere	MIYTGYAMDPQTFEASPIEEMDPIECPACHQVHRWTKRDARFERDPNE
Ga0207707_106525322	3300025912	Corn Rhizosphere	MIYTGYSMDPAIFEASPIEEMDPIQCPVCHQTHRWTKRDARFERDPNE
Ga0207660_100177231	3300025917	Corn Rhizosphere	MIYTGYAMDPLTFEASPIEEMDPIECPACHQLHHWTKKDARFERDPNE
Ga0207657_106746052	3300025919	Corn Rhizosphere	MIYTGYAMDPLTFEASPIEEMDPIECPACHQLHHWTKKDA
Ga0207665_106866151	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MIYTGYSMDPQTFEASPIEEMDPIECPACHQTHRWSKRDARFERDPNE
Ga0207667_116112462	3300025949	Corn Rhizosphere	FEASPIEEMDPIECPACHQLHHWTKKDARFERDPNE
Ga0207640_121120261	3300025981	Corn Rhizosphere	MIYTGYAMDPQTFEASPIEEMDPIECPACHQVHRWTKRDARFERD
Ga0209880_10209284	3300026271	Soil	MIYTGFSMDPQTFDASPIEEMDPVECPACHQMHRWSK
Ga0209880_10758261	3300026271	Soil	GFSMDPQTFDASPIEEMDPVECPACHQMHRWSKADARFERDPNE
Ga0209880_10894851	3300026271	Soil	GFSMDPQTFDASPIEEMDPVECPACHQMHRWSKKDARFERDPNE
Ga0209155_10224403	3300026316	Soil	MIYTGYSMDPAIFEASPIEEMDPVVCPACHQTHRWSKRDARFERDPNE
Ga0209219_10087364	3300027565	Forest Soil	MIYTGFSMDPQTFEASPIEEMDPIQCPACRQMHRWTKRDARFERDPNE
Ga0209488_100369304	3300027903	Vadose Zone Soil	MIYTGYSMDPQTFGAIPIEQMDPIECPACHKMHRWGKEDALFERDSQDPKKSSR
Ga0137415_100571071	3300028536	Vadose Zone Soil	MIYTGYSMDPQTFEASPIEEMDPIQCPACHQMHRWSKRDARFERDPNE
Ga0307310_100574722	3300028824	Soil	MIYTGYSMDPKTFGAIPIEQMDPIECPACHRMHRWGKQDALFEREGPDPKQK
Ga0307312_102921952	3300028828	Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHKTHRWNKRDARFERDPNE
Ga0268243_11692371	3300030510	Soil	MIYTGYSMDPQTFESSPIEEMDPIECPACHQTHRWTKKQALF
Ga0310813_100971593	3300031716	Soil	MIYTGFSMDPLTFEASPIEEMDPLVCPACHQTHKWSKKDARFERDPNE
Ga0307469_100399123	3300031720	Hardwood Forest Soil	MIYTGFSMDPQTFEASPIEEMDPIECPACHQTHRWSKRDARFERDPNE
Ga0307416_1011063832	3300032002	Rhizosphere	MIYTGYSMDPEIFAASPIEELDPIQCPICHKTHRWTKKDARFERDPNE
Ga0310810_103195452	3300033412	Soil	YTGFSMDPLTFEASPIEEMDPLVCPACHQTHKWSKKDARFERDPNE
Ga0373959_0068962_626_772	3300034820	Rhizosphere Soil	MIYTGYSMDPAIFEASPIEEMDPIECPACRQTHTWTKKDARFERDPNE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign