Metagenome / Metatranscriptome Family F057774

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057774
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	41 residues
Representative Sequence	MVSVVVSIRMRKMFAEVRKMFLNARHAEQDVRERQASRNF
Number of Associated Samples	101
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.15 %
% of genes near scaffold ends (potentially truncated)	43.38 %
% of genes from short scaffolds (< 2000 bps)	68.38 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.265 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (41.912 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (75.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.88% β-sheet: 0.00% Coil/Unstructured: 44.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF07676	PD40	13.24
PF00069	Pkinase	5.15
PF02518	HATPase_c	2.21
PF03176	MMPL	1.47
PF12706	Lactamase_B_2	1.47
PF16916	ZT_dimer	1.47
PF13517	FG-GAP_3	1.47
PF03704	BTAD	1.47
PF07883	Cupin_2	1.47
PF00291	PALP	1.47
PF12833	HTH_18	1.47
PF02502	LacAB_rpiB	0.74
PF00756	Esterase	0.74
PF05193	Peptidase_M16_C	0.74
PF01794	Ferric_reduct	0.74
PF03551	PadR	0.74
PF01035	DNA_binding_1	0.74
PF00571	CBS	0.74
PF00127	Copper-bind	0.74
PF00107	ADH_zinc_N	0.74
PF00440	TetR_N	0.74
PF03779	SPW	0.74
PF07786	HGSNAT_cat	0.74
PF07609	DUF1572	0.74
PF13360	PQQ_2	0.74
PF02368	Big_2	0.74
PF01957	NfeD	0.74
PF06719	AraC_N	0.74
PF00248	Aldo_ket_red	0.74
PF14905	OMP_b-brl_3	0.74
PF13673	Acetyltransf_10	0.74
PF13424	TPR_12	0.74
PF13683	rve_3	0.74
PF04239	DUF421	0.74
PF02012	BNR	0.74
PF08240	ADH_N	0.74
PF10502	Peptidase_S26	0.74
PF07963	N_methyl	0.74
PF01425	Amidase	0.74
PF13540	RCC1_2	0.74
PF11999	Ice_binding	0.74
PF00561	Abhydrolase_1	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	20.59
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.47
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.47
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	1.47
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	1.47
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.74
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.74
COG0698	Ribose 5-phosphate isomerase RpiB	Carbohydrate transport and metabolism [G]	0.74
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.74
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.74
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.74
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	0.74
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	0.74
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.74
COG4977	Transcriptional regulator GlxA, contains an amidase domain and an AraC-type DNA-binding HTH domain	Transcription [K]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.26 %
Unclassified	root	N/A	25.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.26 %
Unclassified	root	N/A	25.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.26 %
Unclassified	root	N/A	25.74 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	32.35 %
Unclassified	root	N/A	25.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.94 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	32.35 %
Unclassified	root	N/A	25.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.47 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.74 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	20.59 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.15 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.47 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	19.85 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.74 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.74 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.74 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	19.85 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4.41 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.74 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	19.85 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	2.21 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.74 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.74 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	19.85 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2.21 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	1.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.74 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.74 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	19.85 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2.21 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1.47 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.47 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.74 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.74 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.74 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_206278_len_858_cov_6_702797	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
2088090008\|P3_DRAFT_NODE_420112_len_1232_cov_16_381493	Not Available	1282	Open in IMG/M
2088090008\|P3_DRAFT_NODE_428401_len_1944_cov_9_605453	Not Available	1994	Open in IMG/M
2088090008\|P3_DRAFT_NODE_504412_len_1355_cov_10_144650	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig140065	Not Available	1452	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig123041	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig152170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig37964	Not Available	2507	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig59483	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
2140918006\|ConsensusfromContig89048	Not Available	1126	Open in IMG/M
2140918007\|ConsensusfromContig148464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1324	Open in IMG/M
3300000886\|AL3A1W_1021947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300001324\|A2635W6_108741	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300001333\|A21PFW6_1036661	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300001334\|A2165W6_1000539	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300001359\|A3035W6_1030351	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300001359\|A3035W6_1193089	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300001402\|JGI20195J14853_1003170	All Organisms → cellular organisms → Bacteria	5211	Open in IMG/M
3300001406\|JGI20187J14854_1005574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	694	Open in IMG/M
3300001409\|JGI20185J14861_1001522	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2853	Open in IMG/M
3300001409\|JGI20185J14861_1006408	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300001409\|JGI20185J14861_1008560	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300001535\|A3PFW1_10108844	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300001538\|A10PFW1_11121370	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	706	Open in IMG/M
3300001664\|P5cmW16_1027979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1064	Open in IMG/M
3300002025\|smpD1_1106176	Not Available	667	Open in IMG/M
3300002245\|JGIcombinedJ26739_100287965	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300005171\|Ga0066677_10830580	Not Available	510	Open in IMG/M
3300005181\|Ga0066678_10026966	All Organisms → cellular organisms → Bacteria	3082	Open in IMG/M
3300005454\|Ga0066687_10044310	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300005518\|Ga0070699_100043428	All Organisms → cellular organisms → Bacteria	3891	Open in IMG/M
3300005540\|Ga0066697_10224293	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300005553\|Ga0066695_10336255	Not Available	948	Open in IMG/M
3300005553\|Ga0066695_10752966	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300005554\|Ga0066661_10662923	Not Available	614	Open in IMG/M
3300005557\|Ga0066704_10440256	Not Available	862	Open in IMG/M
3300005560\|Ga0066670_10119563	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1503	Open in IMG/M
3300005561\|Ga0066699_10980614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	586	Open in IMG/M
3300005576\|Ga0066708_10157518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	1400	Open in IMG/M
3300005576\|Ga0066708_10169536	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300005576\|Ga0066708_10218133	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1203	Open in IMG/M
3300005586\|Ga0066691_10503968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	723	Open in IMG/M
3300005938\|Ga0066795_10143343	Not Available	712	Open in IMG/M
3300005947\|Ga0066794_10014189	Not Available	2270	Open in IMG/M
3300005947\|Ga0066794_10126596	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005947\|Ga0066794_10127180	Not Available	765	Open in IMG/M
3300006055\|Ga0097691_1003698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	9341	Open in IMG/M
3300006055\|Ga0097691_1011039	All Organisms → cellular organisms → Bacteria → Proteobacteria	4455	Open in IMG/M
3300006055\|Ga0097691_1068369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1144	Open in IMG/M
3300006640\|Ga0075527_10047847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1153	Open in IMG/M
3300006800\|Ga0066660_10057645	Not Available	2571	Open in IMG/M
3300006864\|Ga0066797_1026675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2024	Open in IMG/M
3300006864\|Ga0066797_1175380	Not Available	749	Open in IMG/M
3300006954\|Ga0079219_10026811	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2221	Open in IMG/M
3300007821\|Ga0104323_124786	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1912	Open in IMG/M
3300009029\|Ga0066793_10014096	All Organisms → cellular organisms → Bacteria	4267	Open in IMG/M
3300009029\|Ga0066793_10192317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1188	Open in IMG/M
3300009029\|Ga0066793_10620488	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300009649\|Ga0105855_1248009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	550	Open in IMG/M
3300009660\|Ga0105854_1092830	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	938	Open in IMG/M
3300010396\|Ga0134126_11254657	Not Available	822	Open in IMG/M
3300011227\|Ga0137475_101564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1566	Open in IMG/M
3300011246\|Ga0137490_1000642	All Organisms → cellular organisms → Bacteria	5291	Open in IMG/M
3300011992\|Ga0120146_1004512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3591	Open in IMG/M
3300011992\|Ga0120146_1009366	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2125	Open in IMG/M
3300011994\|Ga0120157_1007005	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3176	Open in IMG/M
3300011996\|Ga0120156_1006214	All Organisms → cellular organisms → Bacteria	2677	Open in IMG/M
3300011998\|Ga0120114_1003509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	4139	Open in IMG/M
3300011998\|Ga0120114_1053674	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	789	Open in IMG/M
3300012001\|Ga0120167_1033629	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1201	Open in IMG/M
3300012003\|Ga0120163_1007024	All Organisms → cellular organisms → Bacteria	4359	Open in IMG/M
3300012003\|Ga0120163_1052349	Not Available	984	Open in IMG/M
3300012004\|Ga0120134_1076226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	608	Open in IMG/M
3300012010\|Ga0120118_1041337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1183	Open in IMG/M
3300012014\|Ga0120159_1014383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3136	Open in IMG/M
3300012014\|Ga0120159_1025219	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300012019\|Ga0120139_1049760	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300012199\|Ga0137383_10236801	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300012208\|Ga0137376_10224885	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1626	Open in IMG/M
3300012208\|Ga0137376_11600812	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300012285\|Ga0137370_10050065	Not Available	2238	Open in IMG/M
3300012285\|Ga0137370_10954050	Not Available	529	Open in IMG/M
3300012469\|Ga0150984_116585091	All Organisms → cellular organisms → Bacteria	2020	Open in IMG/M
3300012923\|Ga0137359_10264472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1534	Open in IMG/M
3300012925\|Ga0137419_10869683	Not Available	741	Open in IMG/M
3300013294\|Ga0120150_1001333	All Organisms → cellular organisms → Bacteria	6746	Open in IMG/M
3300013294\|Ga0120150_1041196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	902	Open in IMG/M
3300013294\|Ga0120150_1104049	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	535	Open in IMG/M
3300013501\|Ga0120154_1004934	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4063	Open in IMG/M
3300013758\|Ga0120147_1015259	Not Available	1547	Open in IMG/M
3300013764\|Ga0120111_1003393	All Organisms → cellular organisms → Bacteria	5840	Open in IMG/M
3300013764\|Ga0120111_1010793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2810	Open in IMG/M
3300013768\|Ga0120155_1036250	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300013772\|Ga0120158_10338280	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	713	Open in IMG/M
3300014052\|Ga0120109_1023536	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1377	Open in IMG/M
3300014823\|Ga0120170_1107861	Not Available	560	Open in IMG/M
3300015079\|Ga0167657_1014678	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300015079\|Ga0167657_1037460	Not Available	570	Open in IMG/M
3300015080\|Ga0167639_1044823	Not Available	567	Open in IMG/M
3300015192\|Ga0167646_1000804	All Organisms → cellular organisms → Bacteria	11483	Open in IMG/M
3300015192\|Ga0167646_1043645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1051	Open in IMG/M
3300015193\|Ga0167668_1003853	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3297	Open in IMG/M
3300015193\|Ga0167668_1004923	Not Available	2964	Open in IMG/M
3300015199\|Ga0167647_1004936	All Organisms → cellular organisms → Bacteria	4470	Open in IMG/M
3300017659\|Ga0134083_10599871	Not Available	503	Open in IMG/M
3300017695\|Ga0180121_10386145	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300018000\|Ga0184604_10001081	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3656	Open in IMG/M
3300018028\|Ga0184608_10009921	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3216	Open in IMG/M
3300018051\|Ga0184620_10324293	Not Available	521	Open in IMG/M
3300018061\|Ga0184619_10003047	All Organisms → cellular organisms → Bacteria	6130	Open in IMG/M
3300018075\|Ga0184632_10223788	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300018433\|Ga0066667_10482916	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300019887\|Ga0193729_1110450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1035	Open in IMG/M
3300019887\|Ga0193729_1199096	Not Available	684	Open in IMG/M
3300020015\|Ga0193734_1042116	Not Available	849	Open in IMG/M
3300021344\|Ga0193719_10013153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	3488	Open in IMG/M
3300021363\|Ga0193699_10328815	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300022756\|Ga0222622_10683356	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300025505\|Ga0207929_1000757	All Organisms → cellular organisms → Bacteria → Proteobacteria	8693	Open in IMG/M
3300025505\|Ga0207929_1007223	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300025505\|Ga0207929_1033967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	971	Open in IMG/M
3300025922\|Ga0207646_10009303	All Organisms → cellular organisms → Bacteria	9716	Open in IMG/M
3300026271\|Ga0209880_1014531	Not Available	2016	Open in IMG/M
3300026523\|Ga0209808_1181799	Not Available	743	Open in IMG/M
3300027603\|Ga0209331_1046485	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300027645\|Ga0209117_1105585	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300027651\|Ga0209217_1008037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3493	Open in IMG/M
3300027651\|Ga0209217_1030277	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300027674\|Ga0209118_1022274	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300027674\|Ga0209118_1110081	Not Available	774	Open in IMG/M
3300027748\|Ga0209689_1146542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1144	Open in IMG/M
3300027775\|Ga0209177_10016228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1768	Open in IMG/M
3300028715\|Ga0307313_10258388	Not Available	542	Open in IMG/M
3300031421\|Ga0308194_10121833	Not Available	775	Open in IMG/M
3300032180\|Ga0307471_100544147	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.26%
Host-Associated	Host-Associated	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.12%
Aquatic	Environmental → Aquatic	5.15%
Plants	Host-Associated → Plants	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.38%
Sediment	Environmental → Aquatic → Sediment	4.41%
Freshwater	Environmental → Aquatic → Freshwater	0.74%
Unclassified	Environmental → Terrestrial → Unclassified	0.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.82%
Loam	Environmental → Terrestrial → Soil → Loam	8.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.41%
Ice	Environmental → Aquatic → Freshwater → Ice	0.74%
Unclassified	Environmental → Terrestrial → Unclassified → Unclassified	0.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	42.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.21%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Unclassified	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.76%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	8.09%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	6.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.15%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	5.15%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.15%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.68%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	2.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.47%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.47%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Permafrost And Active Layer Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Cryoconite Hole, Glacier Surface	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Cryoconite Hole, Glacier Surface	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2140918006	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000886	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-65cm-3A)- 1 week illumina	Environmental	Open in IMG/M
3300001324	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A26-35cm)- 6 month illumina	Environmental	Open in IMG/M
3300001333	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300001359	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-35cm)- 6 month illumina	Environmental	Open in IMG/M
3300001402	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012	Environmental	Open in IMG/M
3300001406	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012	Environmental	Open in IMG/M
3300001409	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012	Environmental	Open in IMG/M
3300001535	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002025	Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007821	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-10-2 Soapdenovo	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009649	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-059	Environmental	Open in IMG/M
3300009660	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011227	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 10 - S13.1.50.a - transect 1, age 50 years, surface depth).	Environmental	Open in IMG/M
3300011246	Glacer surface microbial communities from an Arctic cyroconite hole, Midre Lovenbreen, Svalbard, Norway (Sample 22)	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300015079	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6b, vegetation/snow interface)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015199	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2c, rock/snow interface)	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00522990	2088090004	Soil	MVSVVVSIRMRKMFVEMRSMFVNARHAEQDIRERQASKNF
P3_DRAFT_00285690	2088090008	Soil	MVSVVVSIRMRKMFAEVRKTFLNARHAEQDVREMQASWNF
P3_DRAFT_00804870	2088090008	Soil	MVSVVVSIQMRKMFAEVRKMFLNARHAEQDVRERQASRNF
P3_DRAFT_00856040	2088090008	Soil	MVSVVVSVVESIRMRKMFVEMRSMFVNARHAEQDIRERQASKNF
Perma_A_C_02648160	2124908032	Soil	MVSVVSVVVSIRMRKMFAEVRKMFSNARHAEQDVRERQASR
P3_CLC_00961350	2124908041	Soil	MVSVVVSIRMRKMFAEVRKMFLNARHAEQDVRERQASKNF
P3_CLC_00224810	2124908041	Soil	SVVVSIRVRKMFAEVRKMFLNARHAEQDVRERQASWNF
P3_CLC_02771600	2124908041	Soil	VSIQMRKMFAEVRKMFSNARHAEQDVRERQASRNF
P3_CLC_01226640	2124908041	Soil	MNWLACSRTAMVSVVVSIRMRKMFVEVRKMFLNARDAEQ
P1_C_00868540	2140918006	Soil	MVSVVSVVVSIRMRKMFAEVRKMFSNARHAEQDVRE
A_all_C_01440530	2140918007	Soil	MVSVVVSIQMRKMFAEVRKMFSNARHAEQDVRERQASRNF
AL3A1W_10219473	3300000886	Permafrost	VSVVVSIQMRKVFAEVRKMLSNARHAEQDVRERQASKNF*
A2635W6_1087411	3300001324	Permafrost	MVSVIVSIHLRKMFVEVRKMFVNARHAEQDVRERQASRNF*
A21PFW6_10366611	3300001333	Permafrost	SVVVSIRMRKMFAEVRKIFVNARHAEQDVRERQPSKNF*
A2165W6_10005391	3300001334	Permafrost	MVSIVVSIRMRKMFAEVRNIFSNARDAEQDVRERQA
A3035W6_10303511	3300001359	Permafrost	VNWLTCSQIAMVSVVVSIQMRKMFAEARRMFVNARDAEQDVRERQASRNF*
A3035W6_11930892	3300001359	Permafrost	MVSVVVSIQMRKMFAEVRKMFVNARRAEQDVRERQASRNFCD*
JGI20195J14853_10031701	3300001402	Arctic Peat Soil	VPRGILVSVVVSIRMRKMFAEVRKMFSNARHAELDV
JGI20187J14854_10055743	3300001406	Arctic Peat Soil	QMVSVVVSIRRRKMFAQVRKMFLNARHAEQDVRERQAGRNF*
JGI20185J14861_10015224	3300001409	Arctic Peat Soil	MVSVVVSIRMRKMFAEVRNMFVNARHAEQDVREMQASXNF*
JGI20185J14861_10064082	3300001409	Arctic Peat Soil	MVSVVVSIRMRKMFAEVRKMFLNVRHAEQDVRERQAS
JGI20185J14861_10085602	3300001409	Arctic Peat Soil	VSVVVSIQMRKMFAEMRKMFSNTRDAEQDVREKAGDRNF
A3PFW1_101088442	3300001535	Permafrost	MNWLACSRIAMVSVVVSIRMRKMFAEARKMFSNARHAEQDVRERQASRNF*
A10PFW1_111213702	3300001538	Permafrost	MVSVVVSIRMRKMFAEVRKMFSNVRHAEQDVRERQASGNF*
P5cmW16_10279791	3300001664	Permafrost	VVSIQMRKVFAEVRKMHSNARHAEQDVRERQASKNF*
smpD1_11061761	3300002025	Permafrost And Active Layer Soil	MVSVVVSIRMRKMFAEVRKMLSNARQAEQDVRERQASRNF*
JGIcombinedJ26739_1002879653	3300002245	Forest Soil	VSVVVPIQMRKMFAEMRKMFSDARDAEQDVRGRQASKNF*
Ga0066677_108305801	3300005171	Soil	MVSVVVSIQMRKLFVEVRKIFVNARHAEQDVRERYASKNFSTEFMFA*
Ga0066678_100269665	3300005181	Soil	MVSVVVSIRMRKMFAKVRKMFLNARDAEQDGRETQASRNF*
Ga0070682_1015699921	3300005337	Corn Rhizosphere	MVSVGVSIPMRKLLSEVRKGFVNARGAEQDVREGQAGKNFRAEFMFV*
Ga0066687_100443102	3300005454	Soil	VSVVVSIHMRKMFAEVRKTFSNARHAEQDVRERQAGRNF*
Ga0070699_1000434282	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MVSVVVSIQMRKVFAEVRKMLTNARHAEQDVRERQASKNF*
Ga0066697_102242932	3300005540	Soil	MEAVSVVVSIRMRKMFTEVRKMFLDARLAEQDVR*
Ga0066695_103362552	3300005553	Soil	MEAVSVVVFIRMRKMFTEVRKMFLDARLAEQDVR*
Ga0066695_107529663	3300005553	Soil	VSLVVSIQIRKTFAEARKMLLNARDAQQDVRERQTSRNF*
Ga0066661_106629232	3300005554	Soil	MEAVSVVVSIRMRKMFTEVRKMFLDARLAERDVR*
Ga0066704_104402562	3300005557	Soil	MVSVVVSVHTREMFAEKRKMFSNARDAKQGVRETQASRNF*
Ga0066670_101195632	3300005560	Soil	VNRLACLRIAMVSVVASIYMRKVLAEVRMMFSNARDAEQGVRERQANRNF*
Ga0066699_109806141	3300005561	Soil	RRMVSVVVSIQRRKMFVNVCKMRLNAQRAEQDVRESQASKNF*
Ga0066708_101575182	3300005576	Soil	VNRHLCGSRLVSVVVSIQMRKMFAEVRKMFLNARDAEQDVRESQASGNF*
Ga0066708_101695363	3300005576	Soil	LVVSIQMRTMFMEVHRIFLNARFAEHGVRERQAS*
Ga0066708_102181331	3300005576	Soil	LPCIAMVSVVVSIRMRKMFAEVCKMFLNGRHAEQDVRERWASRNF*
Ga0066691_105039682	3300005586	Soil	VSVVVSIQMRKVFAEVRKMLSNARHAEQDVRERQA
Ga0066795_101433432	3300005938	Soil	VPRGILVSVVVSIRMREMFAEVRKMFLNARHAEQDVRERQASWNF*
Ga0066794_100141891	3300005947	Soil	VPRGILVSVVVSIRMRKMFAEVRKMFLNARHAEQDVRE
Ga0066794_101265962	3300005947	Soil	MVSVVVSIRMRKMFAEMRKMFINARHAEQDVRERQASRNF*
Ga0066794_101271801	3300005947	Soil	MVSVVVSIQMRKMFMEVRKMFFNARLAEQDARERQASRNF*
Ga0097691_10036989	3300006055	Arctic Peat Soil	MVSVVVSIQMRKMFVEVRKMFVNARHAEQDVRERQASRNF*
Ga0097691_10110392	3300006055	Arctic Peat Soil	MVSVVVSIRMRKMFAEMRKMFLNAQHAEQDVRERQVRLFLCLL*
Ga0097691_10683691	3300006055	Arctic Peat Soil	MVSVVVSIRMRKMFAEVRKMFLNARHAEQDVRERQASRNF*
Ga0075527_100478472	3300006640	Arctic Peat Soil	VVSVVVSVRMRKMFAQVRKIFVNVKHAEQDVRERQASRNF*
Ga0066660_100576452	3300006800	Soil	MEAVSVVVSIRMRKMFTEVRKMLLDARLAEQDVR*
Ga0066797_10266752	3300006864	Soil	LPAPLKFNADVPRGILVSVVVSIRMRKMFAEVRKMFAKARDAEQDVRERQASRNF*
Ga0066797_11753802	3300006864	Soil	VVSVVVSIQMRKMFAEMRKMFSNTRDAEQDVREKAGDRNF*
Ga0079219_100268111	3300006954	Agricultural Soil	MVAVVVSIHLRKMFAEVRKSFLNARGAEQDFRERQASKNL*
Ga0104323_1247861	3300007821	Soil	MAMVSVVVSIQMRKMFAEVRKMFVNARHAEQDVRE
Ga0066793_100140961	3300009029	Prmafrost Soil	RMVSVVVSIRMRKMFAEVRKMFAKARDAEQDVRERRASRNF*
Ga0066793_101923172	3300009029	Prmafrost Soil	MVSVVVSIRMRKMFAEVRKMFLNARHAEQDVRERQASWNF*
Ga0066793_106204883	3300009029	Prmafrost Soil	MVSVVVSIRMRKMFAEVRKMFAKARDAEQDVRERQASRNF
Ga0105855_12480091	3300009649	Permafrost Soil	MVSVVVSIQMRKMFAEVRKMFSNARDAEQDVRERQAS*
Ga0105854_10928302	3300009660	Permafrost Soil	VVSVVVSIQMRKVFAEVRKMLSNARHAEQDVRERQASKNF*
Ga0134126_112546572	3300010396	Terrestrial Soil	SPIAMVAVVVSIHLRKMFAEVRKSFLNARGAEQDFRERQASKNL*
Ga0137475_1015642	3300011227	Glacier Forefield Soil	MVSVVMSIRMRKMFAEVRKTFSNAQRAEQDVRERQANWNF*
Ga0137490_10006424	3300011246	Cryoconite Hole, Glacier Surface	MVSVVVSIRMRKMFAEVRKTFSNAQRAEQDVRERQANWNF*
Ga0120146_10045123	3300011992	Permafrost	MQRNAVVSVVLSIRLRKMFLEVRKMFLSARHAEQDVRERQASRNF*
Ga0120146_10093662	3300011992	Permafrost	MVSVVVSIQMRKMFALVRKMFLNARHAEQDVRERQASKNF*
Ga0120157_10070055	3300011994	Permafrost	MVSVVVSIRMRKMFAEARKMFSNARHAEQDVRERQASRNF*
Ga0120156_10062142	3300011996	Permafrost	MVSVVVSIRMRKMFAEVRKIFVNARHAEQDVRERQPSKNF*
Ga0120114_10035094	3300011998	Permafrost	SRVAMVSVVVSIRMRKMFAEVRKIFVNARHAEQDVRERQPSKNF*
Ga0120114_10536741	3300011998	Permafrost	MVSVVVSIQMRKMFAEVRKMFVNARRAEQDIRERQASRNFCD*
Ga0120167_10336291	3300012001	Permafrost	MQRNAVVSVVLSIRLRKMFLEVRKMFLSARHAEQDVRERQA
Ga0120163_10070245	3300012003	Permafrost	VAIVSVVVSIRMRKMFAEVRKIFVNARHAEQDVRERQPSKNF*
Ga0120163_10523492	3300012003	Permafrost	GVAMVSVVVSIRMRKMFAEVRKMFSNARDAEQDVRERQASRNF*
Ga0120134_10762261	3300012004	Permafrost	MVSVVVSIQTRKMLAEVRKMFVNARDAEQDVREGQASR
Ga0120118_10413371	3300012010	Permafrost	MQRNAVVSVVLSIRLRKMFLEVRKMFLSARHAEQD
Ga0120159_10143831	3300012014	Permafrost	MVSVVVSIQMRKMFALVRKMFLNARHAEQDVRERQAS
Ga0120159_10252192	3300012014	Permafrost	MVSIVVSIRMRKMFAKVRKMFLNARHAEQDVRERQASRNF*
Ga0120139_10497601	3300012019	Permafrost	MNWLTCSQIAMVSVVVSIRMRKMFAELRKMFSNARDAEQDVRERQASRNF*
Ga0137383_102368011	3300012199	Vadose Zone Soil	MEAVSVVVSIRMRKMFTAVRKMFLDARLAEQDVR*
Ga0137376_102248852	3300012208	Vadose Zone Soil	LIQRNVVVSVVVSIRLRKMFLEVRKMFLSARHAEQDVRE
Ga0137376_116008121	3300012208	Vadose Zone Soil	MVSVVVSIGMRKMFVAARKMILNARTAEQDVRERRAGRNF*
Ga0137370_100500652	3300012285	Vadose Zone Soil	VSVVVSIQMRKMFAEVHKMLSNARNAEQDVRERLASKNF*
Ga0137370_109540501	3300012285	Vadose Zone Soil	GTGSLPCIAMVSVVVSIRMRKMFAEVRKMFLYARDAERDVRERQASRNF*
Ga0150984_1165850913	3300012469	Avena Fatua Rhizosphere	MVSVVVSIQMRKMFVEVRKTISNARHAEQVFVKRQASKNF*
Ga0137359_102644721	3300012923	Vadose Zone Soil	MEAVSVVVSIRTRKMFTEVRKMFLDARIAEQDVR*
Ga0137419_108696832	3300012925	Vadose Zone Soil	MVSVVVSIQMRKMFVEVRKMFLNARRAEQDVRARQAYRNF*
Ga0120150_10013336	3300013294	Permafrost	MVSVVVSIQMRKMFAEVRKMFVKARHAEQDVRERQASRNF*
Ga0120150_10411961	3300013294	Permafrost	MQRNAVVSVVLSIRLRKMFLEVRKMFLSARHAEQDVRERQASRN
Ga0120150_11040491	3300013294	Permafrost	MQNSVVVSIRMRKNFAEVRKMFSNARDAEQDVRERQASR
Ga0120154_10049345	3300013501	Permafrost	VSIRMRKMFAKVRKVFLNARHAEQDVRERQASRNF*
Ga0120147_10152594	3300013758	Permafrost	AMVSVVVSIQMRKMFAEVRKMFVNARRAEQDVRERQASRNFCD*
Ga0120111_10033932	3300013764	Permafrost	MVSVVVSIQMRKMFADVRTMFVNARHAEQDVRERQASWNF*
Ga0120111_10107931	3300013764	Permafrost	MVSVVVSIQMRKMFALVRKMFLNARHAEQDVRERQASRNF*
Ga0120155_10362501	3300013768	Permafrost	MVSIVVSIRMRKMFAKVRKMFLNARHAEQDVRERQ
Ga0120158_103382802	3300013772	Permafrost	MVSVLVSIHMRKMFAEVRKMFSNARDAEQDVRERQANWHF*
Ga0120109_10235362	3300014052	Permafrost	VNWLTCSQIAMVSVVVSIQMRKMFAETRRMFVNARDAEQDVRERQASRNF*
Ga0120170_11078612	3300014823	Permafrost	MQRNAVVSVVLSIRLRKMFLEVRKMFLSARHAEQDV
Ga0167657_10146782	3300015079	Glacier Forefield Soil	MVSVVVSIRMRKMFAEVRKMFLNARDAEQDVRERQASLNF*
Ga0167657_10374602	3300015079	Glacier Forefield Soil	CAYGSRMVSVVVAIRMCKMFAEVRKMFVNARHAEQDVRERQASRNF*
Ga0167639_10448232	3300015080	Glacier Forefield Soil	MEAVSVVVSIGTRKMFTEVRKMFLDARLAEQDVR*
Ga0167646_100080413	3300015192	Glacier Forefield Soil	MVSVVVSIQMRIMFAEVRKMFVNARRAEQDVRERQASRNF*
Ga0167646_10436452	3300015192	Glacier Forefield Soil	MVFVVMSIRMRKMFAEVRKTFSNAQRAEQDVRERQGNWNF*
Ga0167668_10038533	3300015193	Glacier Forefield Soil	MVSVVVSIQIDEMFVQVRKMFLNARDAEQDVREKQAS*
Ga0167668_10049232	3300015193	Glacier Forefield Soil	MVSVVVSIQMRKMFGEVRKMFSNARHAEQDVRERHANRNFSAYFMFV*
Ga0167647_10049364	3300015199	Glacier Forefield Soil	MVSVVVSIQMRKMFVEVRKMFLNARYAEQDVRERQASMHF*
Ga0134083_105998711	3300017659	Grasslands Soil	SVVVSIQMRKMFAEVRKMFLNARDAEQNGRERQASRNF
Ga0180121_103861451	3300017695	Polar Desert Sand	MVSVVVSIRMRKMFAEVRKMFLNARHAEQDVRERQAS
Ga0184604_100010812	3300018000	Groundwater Sediment	MVSVVVSIGMRKMFAEVRRMFSNSRDAEQDVSERQASRNF
Ga0184608_100099212	3300018028	Groundwater Sediment	MVSVVVSIGMRKMFAEVRRMFSNARDAEQDVSERQASRNF
Ga0184620_103242932	3300018051	Groundwater Sediment	MVSVVVSIGMRKMFAEVRRMFSNARDAEQDLSERQASRNFCAYFMFV
Ga0184619_100030472	3300018061	Groundwater Sediment	MVSVVVSIQMRKMFAEVRKMFVKARRAEQVVRERQASRNF
Ga0184632_102237881	3300018075	Groundwater Sediment	MVSVVVSIQMRKMFAEVRKMFSNARDAEQDVRERQASKNF
Ga0066667_104829162	3300018433	Grasslands Soil	VSVVVSIQMRKMFVEVRKMFLNARDAEQDVRLVDNQRRRA
Ga0193729_11104502	3300019887	Soil	MVSVVVSIQMRKMFAEVRKMFSNARGAEQDVRERQASKNF
Ga0193729_11990961	3300019887	Soil	ESVVVSVRMHKMLVEVRKMFLNARHAEQDVRERQATRNF
Ga0193734_10421161	3300020015	Soil	DSLAVVVSVVVSIQMRKMFAEVCKMFVNVRHAEQDVRERQA
Ga0193719_100131532	3300021344	Soil	MVSVVVSIGMRKMFAEVRRMFSNARDAEQDLSERQASRNF
Ga0193699_103288152	3300021363	Soil	MADVSVVVSIQMRKIFAEVRKMFLNARDAEQDGRERQASKNF
Ga0222622_106833561	3300022756	Groundwater Sediment	VVSIVVSIQLRKIFVQVRKMFSNARGAEQDVRESQASKNF
Ga0207929_10007573	3300025505	Arctic Peat Soil	VVSVVVSIQMRKMFAEMRKMFSNTRDAEQDVREKAGDRNF
Ga0207929_10072232	3300025505	Arctic Peat Soil	MVSVVVSIRMRKMFAEVRNMFVNARHAEQDVREMQASWNF
Ga0207929_10339671	3300025505	Arctic Peat Soil	MVSVVVSIRMRKMFAEVRKMFANARQAEQDVCERQASMNF
Ga0207646_100093035	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVSVVVSIQMRKVFAEVRKMLTNARHAEQDVRERQASKNF
Ga0209880_10145312	3300026271	Soil	VPRGILVSVVVSIRMREMFAEVRKMFLNARHAEQDVRERQASWNF
Ga0209808_11817991	3300026523	Soil	QSKVPAEVNRHLCGSRLVSVVVSIQMRKMFAEVRKMFLNARDAEQDVRESQASGNF
Ga0209331_10464851	3300027603	Forest Soil	MVSVVVSIQLRKMFAEVRKMFSNARDAEQDVRERQASRNFCDL
Ga0209117_11055851	3300027645	Forest Soil	MVSVVVSIQLRKMFAEVRKMFSNARHAEQDVRERQASRNF
Ga0209217_10080372	3300027651	Forest Soil	MVSVVVSIQMRKMFAEVRKMFVNARRAEQDVRERQASRNF
Ga0209217_10302772	3300027651	Forest Soil	MVSIRMRKMFAEVRKMLVNARHAEQDVRERQASMNF
Ga0209118_10222742	3300027674	Forest Soil	MEAVSIVVSIRMRKMFTEVRKMFVNARRAEQDVRERQASRNF
Ga0209118_11100811	3300027674	Forest Soil	MVSVVVSIQMRKMFQMRKMFVEVRKMFSNARRAEQDVRES
Ga0209689_11465422	3300027748	Soil	RADFLVSVVVSIQMRKVFAEVRKMLSNARHAEQDVRERQARKNF
Ga0209177_100162281	3300027775	Agricultural Soil	VAAVVSINIRKMFAEVRKSFLNARGAEQDFRERQASKNL
Ga0307313_102583882	3300028715	Soil	TVSVVVSIRTRKTFAEVRKMFSNARHAEQDVREMQAS
Ga0308194_101218331	3300031421	Soil	LKEATQVMVSVVVSIQMRKIFVQVRKMFSNAPDAEQDVRER
Ga0307471_1005441471	3300032180	Hardwood Forest Soil	VNSPLARGGVVSAVVSIRMREIFAEVRKMFSNARDAEQDVRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057774

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences