Metagenome / Metatranscriptome Family F062933

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F062933
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	105 residues
Representative Sequence	MRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Number of Associated Samples	107
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.21 %
% of genes near scaffold ends (potentially truncated)	37.69 %
% of genes from short scaffolds (< 2000 bps)	73.08 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.462 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (33.077 % of family members)
Environment Ontology (ENVO)	Unclassified (45.385 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (80.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.47% β-sheet: 19.53% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF01895	PhoU	7.69
PF00004	AAA	6.15
PF16193	AAA_assoc_2	3.08
PF03099	BPL_LplA_LipB	3.08
PF06912	DUF1275	3.08
PF03976	PPK2	2.31
PF03994	DUF350	2.31
PF01544	CorA	2.31
PF00891	Methyltransf_2	1.54
PF04248	NTP_transf_9	1.54
PF12821	ThrE_2	1.54
PF03795	YCII	0.77
PF02775	TPP_enzyme_C	0.77
PF05496	RuvB_N	0.77
PF00211	Guanylate_cyc	0.77
PF00528	BPD_transp_1	0.77
PF08002	DUF1697	0.77
PF03706	LPG_synthase_TM	0.77
PF04519	Bactofilin	0.77
PF09594	GT87	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0095	Lipoate-protein ligase A	Coenzyme transport and metabolism [H]	3.08
COG0321	Lipoate-protein ligase B	Coenzyme transport and metabolism [H]	3.08
COG0340	Biotin-protein ligase	Coenzyme transport and metabolism [H]	3.08
COG3619	Uncharacterized membrane protein YoaK, UPF0700 family	Function unknown [S]	3.08
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	2.31
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	2.31
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	1.54
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.77
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.77
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.77
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	0.77
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.77
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
All Organisms	root	All Organisms	41.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
cellular organisms	root	All Organisms → cellular organisms	41.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.23 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.31 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.54 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.77 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.54 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.62 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	1.54 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.77 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.31 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.54 %
Sutterellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae	0.77 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.77 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.77 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.77 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.54 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.77 %
Sutterella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae → Sutterella	0.77 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.46 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1.54 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.77 %
Sutterella wadsworthensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae → Sutterella → Sutterella wadsworthensis	0.77 %
Microvirga arsenatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga arsenatis	0.77 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000675\|JGI12335J11872_100962	Not Available	586	Open in IMG/M
3300000677\|JGI12373J11866_100855	Not Available	745	Open in IMG/M
3300000698\|JGI12489J11917_101637	Not Available	821	Open in IMG/M
3300000706\|JGI12374J11875_102088	Not Available	732	Open in IMG/M
3300000716\|JGI12331J11884_102564	Not Available	724	Open in IMG/M
3300000734\|JGI12535J11911_1001538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2582	Open in IMG/M
3300000905\|JGI12406J12870_100963	Not Available	1115	Open in IMG/M
3300000905\|JGI12406J12870_106380	Not Available	504	Open in IMG/M
3300001075\|JGI12453J13212_102473	Not Available	700	Open in IMG/M
3300002568\|C688J35102_118054847	Not Available	526	Open in IMG/M
3300005178\|Ga0066688_10300764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1035	Open in IMG/M
3300005332\|Ga0066388_106468969	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005332\|Ga0066388_108156710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Sutterellaceae → Sutterella → Sutterella wadsworthensis	523	Open in IMG/M
3300005467\|Ga0070706_101489079	Not Available	619	Open in IMG/M
3300005540\|Ga0066697_10587880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300005541\|Ga0070733_10129389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1627	Open in IMG/M
3300005541\|Ga0070733_10255490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1153	Open in IMG/M
3300005921\|Ga0070766_10299003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1033	Open in IMG/M
3300006162\|Ga0075030_101359275	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300006176\|Ga0070765_100290625	All Organisms → cellular organisms → Bacteria → Proteobacteria	1509	Open in IMG/M
3300006797\|Ga0066659_11147957	Not Available	650	Open in IMG/M
3300006893\|Ga0073928_10000904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	61716	Open in IMG/M
3300009700\|Ga0116217_10624081	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300009792\|Ga0126374_10399293	Not Available	960	Open in IMG/M
3300010339\|Ga0074046_10650542	Not Available	621	Open in IMG/M
3300010359\|Ga0126376_13163699	Not Available	509	Open in IMG/M
3300010361\|Ga0126378_12519279	Not Available	588	Open in IMG/M
3300010366\|Ga0126379_11165301	Not Available	877	Open in IMG/M
3300010379\|Ga0136449_100635660	All Organisms → cellular organisms → Bacteria → Proteobacteria	1808	Open in IMG/M
3300010379\|Ga0136449_102798065	Not Available	689	Open in IMG/M
3300012925\|Ga0137419_11603206	Not Available	553	Open in IMG/M
3300016270\|Ga0182036_10310150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300016319\|Ga0182033_11987975	Not Available	529	Open in IMG/M
3300016341\|Ga0182035_10765255	Not Available	845	Open in IMG/M
3300016357\|Ga0182032_10626042	Not Available	897	Open in IMG/M
3300016371\|Ga0182034_10752748	Not Available	831	Open in IMG/M
3300016371\|Ga0182034_10966082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga arsenatis	735	Open in IMG/M
3300016371\|Ga0182034_11492438	Not Available	592	Open in IMG/M
3300016387\|Ga0182040_10086253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2087	Open in IMG/M
3300016404\|Ga0182037_10047772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2841	Open in IMG/M
3300016422\|Ga0182039_10855651	Not Available	810	Open in IMG/M
3300016445\|Ga0182038_10223206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1498	Open in IMG/M
3300016445\|Ga0182038_11056578	Not Available	720	Open in IMG/M
3300018468\|Ga0066662_10516439	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300018482\|Ga0066669_12298407	Not Available	514	Open in IMG/M
3300020583\|Ga0210401_10028495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5323	Open in IMG/M
3300021403\|Ga0210397_11097916	Not Available	618	Open in IMG/M
3300021420\|Ga0210394_10004373	All Organisms → cellular organisms → Bacteria	16571	Open in IMG/M
3300021432\|Ga0210384_10218336	All Organisms → cellular organisms → Bacteria → Proteobacteria	1715	Open in IMG/M
3300021478\|Ga0210402_10951515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	786	Open in IMG/M
3300021478\|Ga0210402_11863793	Not Available	527	Open in IMG/M
3300021560\|Ga0126371_10788916	Not Available	1096	Open in IMG/M
3300021560\|Ga0126371_12356703	Not Available	643	Open in IMG/M
3300022557\|Ga0212123_10000024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	482879	Open in IMG/M
3300026331\|Ga0209267_1178188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	844	Open in IMG/M
3300026783\|Ga0207778_100743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2305	Open in IMG/M
3300026800\|Ga0207742_101396	All Organisms → cellular organisms → Bacteria → Proteobacteria	2490	Open in IMG/M
3300026800\|Ga0207742_101971	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300026809\|Ga0207820_104102	Not Available	1294	Open in IMG/M
3300026810\|Ga0207801_100987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2137	Open in IMG/M
3300026817\|Ga0207775_103578	Not Available	1271	Open in IMG/M
3300026819\|Ga0207765_101171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2972	Open in IMG/M
3300026823\|Ga0207759_119053	Not Available	532	Open in IMG/M
3300026830\|Ga0207861_100237	All Organisms → cellular organisms → Bacteria → Proteobacteria	3517	Open in IMG/M
3300026858\|Ga0207729_102624	Not Available	1047	Open in IMG/M
3300026862\|Ga0207724_1000941	All Organisms → cellular organisms → Bacteria → Proteobacteria	3000	Open in IMG/M
3300026871\|Ga0207825_100308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5410	Open in IMG/M
3300026876\|Ga0207837_1001395	All Organisms → cellular organisms → Bacteria	2881	Open in IMG/M
3300026879\|Ga0207763_1018362	Not Available	692	Open in IMG/M
3300026881\|Ga0207739_1001910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2631	Open in IMG/M
3300026887\|Ga0207805_1003371	Not Available	1845	Open in IMG/M
3300026908\|Ga0207787_1001902	All Organisms → cellular organisms → Bacteria	2581	Open in IMG/M
3300026908\|Ga0207787_1004735	Not Available	1518	Open in IMG/M
3300026910\|Ga0207840_1003771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1757	Open in IMG/M
3300026932\|Ga0207836_1035500	Not Available	590	Open in IMG/M
3300026941\|Ga0207741_1002622	All Organisms → cellular organisms → Bacteria	2286	Open in IMG/M
3300026959\|Ga0207852_1025016	Not Available	614	Open in IMG/M
3300026959\|Ga0207852_1027444	Not Available	584	Open in IMG/M
3300026979\|Ga0207817_1001163	All Organisms → cellular organisms → Bacteria	3172	Open in IMG/M
3300026979\|Ga0207817_1020391	Not Available	716	Open in IMG/M
3300026982\|Ga0207854_1010823	Not Available	1231	Open in IMG/M
3300026988\|Ga0207834_1015884	Not Available	970	Open in IMG/M
3300027019\|Ga0207857_1062425	Not Available	551	Open in IMG/M
3300027039\|Ga0207855_1002220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3151	Open in IMG/M
3300027313\|Ga0207780_1004523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3399	Open in IMG/M
3300027516\|Ga0207761_1005949	All Organisms → cellular organisms → Bacteria	3038	Open in IMG/M
3300027516\|Ga0207761_1047961	Not Available	832	Open in IMG/M
3300027824\|Ga0209040_10316785	Not Available	753	Open in IMG/M
3300027889\|Ga0209380_10368063	Not Available	844	Open in IMG/M
3300027905\|Ga0209415_10157517	Not Available	2262	Open in IMG/M
3300027905\|Ga0209415_10636770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	780	Open in IMG/M
3300027911\|Ga0209698_11271058	Not Available	540	Open in IMG/M
3300028906\|Ga0308309_10479121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1074	Open in IMG/M
3300030730\|Ga0307482_1203558	Not Available	603	Open in IMG/M
3300031545\|Ga0318541_10596196	Not Available	618	Open in IMG/M
3300031573\|Ga0310915_10056660	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300031679\|Ga0318561_10812763	Not Available	514	Open in IMG/M
3300031680\|Ga0318574_10763376	Not Available	567	Open in IMG/M
3300031681\|Ga0318572_10413567	Not Available	802	Open in IMG/M
3300031744\|Ga0306918_10104734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2021	Open in IMG/M
3300031747\|Ga0318502_10914062	Not Available	534	Open in IMG/M
3300031819\|Ga0318568_10211331	Not Available	1198	Open in IMG/M
3300031833\|Ga0310917_11026826	Not Available	552	Open in IMG/M
3300031879\|Ga0306919_10013417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4723	Open in IMG/M
3300031890\|Ga0306925_12264044	Not Available	503	Open in IMG/M
3300031912\|Ga0306921_10855620	Not Available	1035	Open in IMG/M
3300031912\|Ga0306921_11608135	Not Available	706	Open in IMG/M
3300031912\|Ga0306921_12310071	Not Available	564	Open in IMG/M
3300031941\|Ga0310912_10217587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1464	Open in IMG/M
3300031942\|Ga0310916_10133809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2030	Open in IMG/M
3300031945\|Ga0310913_10154804	Not Available	1586	Open in IMG/M
3300031945\|Ga0310913_10512381	Not Available	852	Open in IMG/M
3300031946\|Ga0310910_10051525	All Organisms → cellular organisms → Bacteria	2903	Open in IMG/M
3300031947\|Ga0310909_10538865	Not Available	977	Open in IMG/M
3300031954\|Ga0306926_10099624	All Organisms → cellular organisms → Bacteria	3561	Open in IMG/M
3300031954\|Ga0306926_11210005	Not Available	887	Open in IMG/M
3300032001\|Ga0306922_10708924	Not Available	1058	Open in IMG/M
3300032035\|Ga0310911_10236256	Not Available	1044	Open in IMG/M
3300032059\|Ga0318533_11078191	Not Available	589	Open in IMG/M
3300032076\|Ga0306924_10186255	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300032076\|Ga0306924_11830832	Not Available	632	Open in IMG/M
3300032261\|Ga0306920_100751295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1435	Open in IMG/M
3300032261\|Ga0306920_101055951	Not Available	1180	Open in IMG/M
3300032261\|Ga0306920_101629701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	917	Open in IMG/M
3300032261\|Ga0306920_103987908	Not Available	536	Open in IMG/M
3300033289\|Ga0310914_11694984	Not Available	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.46%
Host-Associated	Host-Associated	1.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.62%
Aquatic	Environmental → Aquatic	3.85%
Plants	Host-Associated → Plants	1.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.54%
Sediment	Environmental → Aquatic → Sediment	1.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.54%
Freshwater	Environmental → Aquatic → Freshwater	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.15%
Loam	Environmental → Terrestrial → Soil → Loam	37.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	36.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.15%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.77%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.77%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	33.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.62%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.08%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.54%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.54%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000675	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 54	Environmental	Open in IMG/M
3300000677	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70	Environmental	Open in IMG/M
3300000698	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57	Environmental	Open in IMG/M
3300000706	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65	Environmental	Open in IMG/M
3300000716	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66	Environmental	Open in IMG/M
3300000734	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81	Environmental	Open in IMG/M
3300000905	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42	Environmental	Open in IMG/M
3300001075	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 63	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026783	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 36 (SPAdes)	Environmental	Open in IMG/M
3300026800	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 43 (SPAdes)	Environmental	Open in IMG/M
3300026809	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 47 (SPAdes)	Environmental	Open in IMG/M
3300026810	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 16 (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026830	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 33 (SPAdes)	Environmental	Open in IMG/M
3300026858	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 69 (SPAdes)	Environmental	Open in IMG/M
3300026862	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 31 (SPAdes)	Environmental	Open in IMG/M
3300026871	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 78 (SPAdes)	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300026881	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 15 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026908	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300026932	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 18 (SPAdes)	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300026982	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 7 (SPAdes)	Environmental	Open in IMG/M
3300026988	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 5 (SPAdes)	Environmental	Open in IMG/M
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12335J11872_1009622	3300000675	Tropical Forest Soil	RLELIPMRHIAARHVFALLVALIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPLGLI*
JGI12373J11866_1008551	3300000677	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI*
JGI12489J11917_1016372	3300000698	Tropical Forest Soil	KIELIPMRHIAARHVFALLVALIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPLGLI*
JGI12374J11875_1020882	3300000706	Tropical Forest Soil	LIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPLGLI*
JGI12331J11884_1025642	3300000716	Tropical Forest Soil	RHVFALLVALIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPLGLI*
JGI12535J11911_10015382	3300000734	Tropical Forest Soil	MRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI*
JGI12406J12870_1009632	3300000905	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMXEVRAGHVRRVEIXDQXVXIXESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI*
JGI12406J12870_1063801	3300000905	Tropical Forest Soil	MRHIAARHVFALLVALIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPLG
JGI12453J13212_1024731	3300001075	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMXEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI*
C688J35102_1180548472	3300002568	Soil	VLSFRRLSALIIAVIAGVAAFHFAPEPLPELTRAEFLDEVRAGHVRGIEIEDQEVIIGESTTRGRFRSDFSRARDVGLPDELRALGVEVWFTRSPPGI*
Ga0066688_103007642	3300005178	Soil	AGVTAFYLVPEPLPELSRGQFLEEVRAGHVHRIEIEDEEVIRSESTTRGEFRTGFDKLRDASLADKLRALGVEVWYSRSPPGI*
Ga0066388_1064689691	3300005332	Tropical Forest Soil	ALEEVAIDPAAPAACEAMAHVAARYPISRRRVLALVAAVIFGMIAFFLVPKPLPELTRSEFLAEVRAGHVRAVEIGDQDVIIAESSTRGRFRTEFHEREDVDLPAELRALGVEVSFSKSPPGV*
Ga0066388_1081567101	3300005332	Tropical Forest Soil	TCKLFCERPSARIIATLVLAVIAGTVAAWLVPPPLPELSRTEFMDEVRAGHVRRVKIEDQEIILSESTIRGPFRTNFDKVRDAGLPDQLRGLGVEVWFSKSPFGI*
Ga0070706_1014890792	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VIAGVAAFYLAPEPLPELTRAEFLAEVQAGHVRSIVIEDQEIITGVSTTRGAFRTGFHKTNDAELPAELRIRGVEIRFEKSRPGLI*
Ga0066697_105878802	3300005540	Soil	MSWRSIHRLVLLIASIIAGVTAFYLVPEPLPELSRGQFLEEVRAGHVHRIEIEDEEVIRSESTTRGELRTGFDKLRDASLADKLRALGVEVWYSRSPPGI*
Ga0070733_101293894	3300005541	Surface Soil	MSARSLRRLLLLIVSIIVGVVAFYLVPEPLPELTRVEFLDEVRAGHVHKIEIEDQEVIISESTTRGAFHSAFDPRRDAGLPDELRVLGVEVWYSSSPLTP*
Ga0070733_102554903	3300005541	Surface Soil	HGRLIRYLVLLLVAIGAGYVAYRLVPEPLPELSRAGFMDEVRAGHVRRIEIEDQQVVLSESTTRGKFRAPFDRHRDAALPDELRALGVEVWFSRSALGI*
Ga0070766_102990032	3300005921	Soil	MRWRFVRSLLALVAAVLVGAVAFYLVPPPLPELTRAEFMDEVRAGHVRRVEIEDQEVILSESSTRGEFRTGFDKTRDAGLPDELRALGIEVWFSKSPPGI*
Ga0066651_103985472	3300006031	Soil	VLSFRRLFALIIAVIAGVAALHFAPEPLPELTRAEFLDEVRAGHVQGIEIEDQEVIIGESTTRGRFRSDFSRARDVGLPDELRSLGIEAWFTRSPPGI*
Ga0066652_1008157681	3300006046	Soil	PARHLRRGVRRCGGLRRIERIYVLSFRRLFALIIAVIAGVAAFHFAPEPLPELTRAEFLDEVRAGHVRGIEIEDQEVIIGESTTRGRFRSDFSRARDVGLPDELRALGIEVWFTRSPPGI
Ga0075030_1013592751	3300006162	Watersheds	VAAVIVGVTAFYLVPKPLPELTRAEFMAEVCAGHVRKIEIEDQDVIIGKSSTLEFRTGFNGREDVDLPAELRNLGVEVWFSKSAPGV*
Ga0070765_1002906252	3300006176	Soil	MRWRSVRSLLSLIAAVLVGVVVSEWLPPPLPELTRAEFMDEVRAGHVQRIEIEDQQVILSESSTRGEFRTGFDKTRDAGLPDELRALGVEVWFSKSPPGI*
Ga0066659_111479572	3300006797	Soil	MSWRSIHRLVLLIASIIAGVTAFYLVPEPLPELSRGQFLEEVRAGHVHRIEIEDEEVIRSESTTRGEFRTGFDKLRDASLADKLRALGVEVWYSRSPPGI*
Ga0073928_1000090453	3300006893	Iron-Sulfur Acid Spring	MSPRTLRRLLLLIVSIIVGVVAFYLVPEQLPELSRAEFMDEVRAGHVHRIEIEDQEVILSESTTRGPFRSGFNKARDASLPDELRALGVEIWYSKSPPGI*
Ga0116217_106240812	3300009700	Peatlands Soil	SAWDDPMRRNSLRLALALVAAAIVGVTAVFLTPKPLPELTCADFMAEVRAGHVREIEIEDQAIIIGKSSTRGEFRTDFNRKEDVGLPAELRSLGVEVWFSKSSLGV*
Ga0126374_103992932	3300009792	Tropical Forest Soil	MPRIATRHVLAVVAAVITGVTVFYLLPAPLPELTRAEFMAEIRAGHVRRVEIEDQQVIIGESSTRGEFRTDFHRKEDVNLPAELRALGVEVWYSKSPPGI*
Ga0074046_106505422	3300010339	Bog Forest Soil	MRRNSLRFALALVATAIVGVTAVFLTPKPLPELTRAEFLAEVRAGHVRDIEIEDQDIIIGKSSTRGEFRTGFNRKEDAGLPAELRNLGVAVRFSKSSLGV*
Ga0126376_131636991	3300010359	Tropical Forest Soil	RIATRHVLAVVAAVITGVTVFYLLPAPLPELTRAEFMAEIRAGHVRRVEIEDQQVIIGESSTRGEFRTDFHRKEDVNLPAELRALGVEVWYSISPPGI*
Ga0126378_125192791	3300010361	Tropical Forest Soil	MPRIATRHVLAVVAAVITGVTVFYLLPAPLPELTRAEFMAEIRAGHVRRVEIEDQQVIIGESSTRGEFRTDFHRKEDVNLPAELRALGVEVWYWKSPPGI*
Ga0126379_111653011	3300010366	Tropical Forest Soil	MPRIATRHVLAVVAAVITGVTVFYLLPAPLPELTRAEFMAEIRAGHVRRVEIEDQQVIIGESSTRGKFRTDFHRREDVNLPAELRALGVEVWFSKSPPGI*
Ga0136449_1006356603	3300010379	Peatlands Soil	MRRNSLRLALALVAAAIVGVTAVFLTPKPLPELTCADFMAEVRAGHVREIEIEDQAIIIGKSSTRGEFRTDFNRKEDVGLPAELRSLGVEVWFSKSSLGV*
Ga0136449_1027980651	3300010379	Peatlands Soil	VKPVLAALAGIIAFWLVLEPLPEISRAEFMDEVRAGHVHKIEIEDQEVILSESTARGPFRTGFDRKRDADLADEPRALGVEIWYSTSPPIP*
Ga0137419_116032062	3300012925	Vadose Zone Soil	MRIFLRLVLATVAALVAGVVAFYLVPEPLPELTRAEFMAEVRAGHVSTVAIEDQEVITGISSKRGAFRTVFRRIEDGGLPAELRAMRIEVRFEKSPLGLI*
Ga0132258_110333853	3300015371	Arabidopsis Rhizosphere	VLIIAAIAGVAAFHFAPEPLPELTRAELLDEVRAGHVRGVEIEDQQVIIGESTTRGRFRSGFSKARDVGLPDELRALGIEVWFTRSPPGI*
Ga0132257_1021147332	3300015373	Arabidopsis Rhizosphere	LRRIERIHVLSVRRLVVLIIAAIAGVAAFHFAPEPLPELTRAELLDEVRAGHVRGVEIEDQQVIIGESTTRGRFRSGFSKARDVGLPDELRALGIEVWFTRSPPGI*
Ga0182036_103101503	3300016270	Soil	MHLVSKIGIAILAAAAVAAVIVDTMRPSAARHLFALVAALIVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSESPPGI
Ga0182033_119879751	3300016319	Soil	MHLVSKTGAAVIVDTMRPITARHLFALVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVDLPAELRALGIEVLFSESPLGI
Ga0182035_107652553	3300016341	Soil	RVWGRIAKLGITLIAGVIAFWFVPEPLPELSRAEFMNEVRAGHVRRVEIRDQEVILSQSTARGPFHTGFDRVRDTELPDELRALGVEVRFSKSSLGV
Ga0182032_106260422	3300016357	Soil	IFAAAAVAAVIVDTTRPSAARHLFALVAALIVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGEFRTEFDRNKDVDLPAELRALGIEVLFSESPPGI
Ga0182034_107527481	3300016371	Soil	MRVWASTIAKLGIALIAGVMAFWFVPGPLPELSRAEFVNEVRAGHVRRVEIRDQEVILSQSTARGPFHTGFDRVRDTELPDELRALGVEVRFSKSSLGV
Ga0182034_109660821	3300016371	Soil	MRISASVLSKFVLAVIAGIVAFWFVPKPLPELSRAEFMDEVHAGHVHRVEIEDQEVILGESTTRGPFRTAFDRVGDGGLPDELRAAGVEVWYSKSSPGI
Ga0182034_114924381	3300016371	Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPSAARHLFALVAALIVGVIAFHLVPEPLPELTHAEFMAEVRAGHVEIREQEVIIGESSTCGEFRTEFDRNKDVD
Ga0182040_100862534	3300016387	Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPSAARHLFALVAALIVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGKFRTEFDRNKDVDLPAELRALGIEVLFSESPPGI
Ga0182037_100477721	3300016404	Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPSAARHLFALVAVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIREHEVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSESPPG
Ga0182039_108556511	3300016422	Soil	MHLVSKIGIAILAAAAVAAVIVDTMRPSAARHLFALVAALIVGVIAFHLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGEFRTEFDRNKDVDLPAELRALGIEVLFSESPPGI
Ga0182038_102232063	3300016445	Soil	LVAALIVGVIAFHLVPEPLPELTHAEFMAEVRAGHVEIREQEVIIGESSTCGEFRTEFDRNKDVDLPAELRALGIEVLFSESPPGI
Ga0182038_110565782	3300016445	Soil	LSIHLVTKTGIAILAAAAVAAVIVDTMRPSAARHLFALVAVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIGESSTRREFRTEFDRYKDVDLPAELRVLGIEVLFSESPPGI
Ga0066662_105164392	3300018468	Grasslands Soil	MRPMTVRRFLALIAAAIAGIVAFYFMPEPLPELTRAEFMAEVAAGHVRRVEIDDQEVIIAESSTRGQFRTGFQKAEDANLPAELRAHGVEVWFSRSPPSP
Ga0066669_122984071	3300018482	Grasslands Soil	MSWRSIHRLVLLIASIIAGVTASYVVPEPLSELSREEFFDEVRAGHVHRIEIEDEEVILSESTTRGEFRTGFDKLRDASLADKLRAMGVEVWYSRSPPGIYAGSAHI
Ga0210401_100284957	3300020583	Soil	RAMRWRFVRSLLALVAAVLVGAVAFYLVPPPLPELTRAEFMDEVRAGHVRRVEIEDQEVILSESSTRGEFRTGFDKTRDAGLPDELRALGIEVWFSKSPPGI
Ga0210397_110979162	3300021403	Soil	MRFNSLRFVLALVAAVIAGVTAFLLMPKPLPELTRAEFMAEVRAGHVRKIEIEDQEIILGKSSTRGEFRTDFNRKEDVDLPAELRTLGVEVWFSKSSLGV
Ga0210394_1000437316	3300021420	Soil	MRRVVRTIVLLVLSMLAGVIAFRLVPEPLPELSRAEFMDEVHAGHVHKIEIEDQDVIISESTTRGPFHTTFNRKQDAGLPDHLRAAGIEIWYSSSPPGP
Ga0210384_102183364	3300021432	Soil	MRWRFVRSLLALVAAVLVGAVAFYLVPPPLPELTRAEFMDEVRAGHVRRVEIEDQEVILSESSTRGEFRTGFDKTRDAGLPDELRALGIEVWFSKSPPGI
Ga0210402_109515152	3300021478	Soil	ALIAGGMAFWFVPKPLPELSRAEFMDEVRAGQVRRVEIEDQRVIFSESRRRGPFRTEFDHIRDAQLPNELRALGVEVRLSKSSLGI
Ga0210402_118637931	3300021478	Soil	MRFNSRRFVLALVAAVIAGVTAFLLMPKPLPELTRAEFMAEVRAGHVRKIEIEDQEIILGKSSTRGEFRTDFNRKEDVDLPAELRTLGVEVWFSKSSLGV
Ga0126371_107889162	3300021560	Tropical Forest Soil	MPRIATRHVLAVVAAVITGVTVFYLLPAPLPELTRAEFMAEIRAGHVRRVEIEDQQVIIGESSTRGEFRTDFHRKEDVNLPAELRALGVEVWYSKSPPGI
Ga0126371_123567032	3300021560	Tropical Forest Soil	VFYLVPRTSPELTRAEFMAEIRAGHVHRIEVKNQEVIIGESSTRGNFRTGFDRDKDANLPTELHALGVEVWLSNTYVAI
Ga0212123_10000024451	3300022557	Iron-Sulfur Acid Spring	MSPRTLRRLLLLIVSIIVGVVAFYLVPEQLPELSRAEFMDEVRAGHVHRIEIEDQEVILSESTTRGPFRSGFNKARDASLPDELRALGVEIWYSKSPPGI
Ga0209267_11781882	3300026331	Soil	MSWRSIHRLVLLIASIIAGVTAFYLVPEPLPELSRGQFLEEVRAGHVHRIEIEDEEVIRSESTTRGEFRTGFDKLRDASLADKLRALGVEVWYSRSPPGI
Ga0207778_1007432	3300026783	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTQVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207742_1013964	3300026800	Tropical Forest Soil	MTHIAARHVFALLVALIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPLGLI
Ga0207742_1019711	3300026800	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207820_1041021	3300026809	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207801_1009871	3300026810	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207775_1035782	3300026817	Tropical Forest Soil	MRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207765_1011712	3300026819	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIRDQEVIIGDSSTRGKFRTEFDRYKDVNLPAELRALGIEVLFSTSPPGI
Ga0207759_1190531	3300026823	Tropical Forest Soil	TAVPFQKALSMHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207861_1002373	3300026830	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207729_1026241	3300026858	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEV
Ga0207724_10009414	3300026862	Tropical Forest Soil	LFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207825_1003084	3300026871	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI
Ga0207837_10013955	3300026876	Tropical Forest Soil	ALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI
Ga0207763_10183621	3300026879	Tropical Forest Soil	LSMHLVSKISIAILAATAVAAVMFDIMRPVAARYLFALVAALIVGVIAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQEVIIGESSTRGEFRTEFDRFKEVNLPAELRTLGIEVLFSKSPPGI
Ga0207739_10019103	3300026881	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSLPGI
Ga0207805_10033712	3300026887	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI
Ga0207787_10019021	3300026908	Tropical Forest Soil	FAAPAVAAVIVDTMRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI
Ga0207787_10047351	3300026908	Tropical Forest Soil	ALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207840_10037713	3300026910	Tropical Forest Soil	MRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI
Ga0207836_10355002	3300026932	Tropical Forest Soil	LIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPLGLI
Ga0207741_10026225	3300026941	Tropical Forest Soil	AALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI
Ga0207852_10250161	3300026959	Tropical Forest Soil	MHLVSRIGIAIFAAAAVAAVIVDTVRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVDIEDQQVIIGESSTRGEFRTEFDRHKDVNLPAELRALGIEVLFSTSPPGI
Ga0207852_10274441	3300026959	Tropical Forest Soil	ARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207817_10011632	3300026979	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPTELRALGIEVLFSTSPPGI
Ga0207817_10203911	3300026979	Tropical Forest Soil	RPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI
Ga0207854_10108232	3300026982	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRHKDVNLPAELRALGIEVLFSTSPPGI
Ga0207834_10158841	3300026988	Tropical Forest Soil	MRPIAARHLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207857_10624251	3300027019	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSLPGI
Ga0207855_10022204	3300027039	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMTEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDVNLPAELRALGIEVLFSTSPPGI
Ga0207780_10045234	3300027313	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVDIEDQQVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSTSPPGI
Ga0207761_10059491	3300027516	Tropical Forest Soil	LFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVNLPAELRALGIEVLFSKSPLGI
Ga0207761_10479611	3300027516	Tropical Forest Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPIAARRLFALVAALIAGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIEDQQVIIGESSTRGEFRTEFDRYKDV
Ga0209040_103167851	3300027824	Bog Forest Soil	LALVATAIVGVTAVFLTPKPLPELTRAEFMAEVRAGHVRDIEIEDQDIIIGKSSTRGEFRTGFNRKEDAGLPAELRNLGVAVRFSKSSLGV
Ga0209380_103680631	3300027889	Soil	MRWRFVRSLLALVAAVLVGAVAFYLVPPPLPELTRAEFMDEVRAGHVRRVEIEDQEVILSESSTRGEFRTGFDKTRDAGLPDELRALGIEVWFSK
Ga0209415_101575172	3300027905	Peatlands Soil	VKPVLAALAGIIAFWLVLEPLPEISRAEFMDEVRAGHVHKIEIEDQEVILSESTARGPFRTGFDRKRDADLADEPRALGVEIWYSTSPPIP
Ga0209415_106367702	3300027905	Peatlands Soil	MRRNSLRLALALVAAAIVGVTAVFLTPKPLPELTRAEFMAEVRAGHVRKIEIEDQAIIIGKSSTRGEFRTGFKRQEDADLPAELRNLGVEVWFSKSSLGV
Ga0209698_112710581	3300027911	Watersheds	MRFNSLRFVLALVAAVIVGTTAFLLMPKPLPELTRAEFMAEVRAGHVRKIEIEDQEIILGKSSTGGEFRTDFNRKEDVDLPAELRALGVEVWFSKSSLGV
Ga0308309_104791212	3300028906	Soil	MRWRSVRSLLSLIAAVLVGVVVSEWLPPPLPELTRAEFMDEVRAGHVQRIEIEDQQVILSESSTRGEFRTGFDKTRDAGLPDELRALGVEVWFSKSPPGI
Ga0307482_12035581	3300030730	Hardwood Forest Soil	MRRSRLRHLFALIAAVIAGGVAFYLVPPPLPELTRAEFMAEARAGHVRSVEINDQETIFIDIEARGEFRTGFDKAKDSGLLDELRALGVEVWFSKSSLGI
Ga0318541_105961961	3300031545	Soil	MHLVSKTGAAVIVDTMRPITARHLFALVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVDLPAELRALGIEVLFSKSPLGI
Ga0310915_100566603	3300031573	Soil	MRHIAARHVFALVVALIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPLGLI
Ga0318561_108127632	3300031679	Soil	MRRIGLGHLLSLIAALIAGVVAFHFVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIAESATRGEFRTAFDRRDDGKLPNQLRALGIEVWFTRSPPGI
Ga0318574_107633762	3300031680	Soil	HSAARHVFALVVALIVGVTVFYRLPEPLPELTRAEFMAEVRAGHVRRIEIEDQEVIIAESSTRGEFRTGFDRKVDVNLPAELRALGVEVYFSKSPIGLI
Ga0318572_104135671	3300031681	Soil	MHLVSKTGAAVIVDTMRPITARHLFALVAALIVGVIAFHLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGKFRTEFDRNKDVDLPAELRALGIEVLFSKSPLGI
Ga0306918_101047341	3300031744	Soil	VAALIVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIGESSTRGEFRTEFDRYKDVDLPAERRALGIEVLFSESPPGI
Ga0318502_109140621	3300031747	Soil	IRPSAARHLFALVAALIVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGKFRTEFDRNKDVDLPAELRALGIEVLFSKSPLGI
Ga0318568_102113312	3300031819	Soil	MHLVSKTGAAVIVDTMRPITARHLFALVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDA
Ga0310917_110268262	3300031833	Soil	AAVIVDTMRPSAARHLFALVAALIVGVTAFHLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGKFRTEFDRNKDADLPAELRALGIEVLFSASPLGI
Ga0306919_100134174	3300031879	Soil	MRPIAARHLFALVAALVVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGKFRTEFDRNKDVDLPAERRALGIEVLFSESPPGI
Ga0306925_122640441	3300031890	Soil	LITVLAKKGPRLLKSLTLIKFHSPSLPKGASMHLVSKIGIAIFAAAAVAAVIVDTMRPSAARHLFALVAALIVGVIAFHLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGEFRTEFDRNKDVDLPAELRALGIEVLFSESPPGI
Ga0306921_108556201	3300031912	Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPSAARHLFALVAALIVGVIAFHLVPEPLPELTHAEFMAEVRAGHVEIREQEVIIGESSTCGEFRTEFDRNKDVDLPAELRALGIEVLFSESPPG
Ga0306921_116081352	3300031912	Soil	MPRIATRHVLAVVAAVITGVTVFYLLPAPLPELTRAEFMAEIRAGHVHRVEIEDQQVIIGESSTRGEFRTDFHRKEDVNLPAELRALGVEVWFSKSPPGI
Ga0306921_123100711	3300031912	Soil	NHSAMRPSARTIVTLVLAVIAGTVAAWLVPPPLPELSRTEFMDEVRAGHVRRVEIEDQEVILSESTIRGPFRTNFDKVRDAGLPDQLRGLGVEVWFSKFPLGI
Ga0310912_102175871	3300031941	Soil	MHLVSKIGIAILAAAAVAAVIVDTMRPSAARHLFALVAALIVGVIAFHLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGEFRTEFDRYKDVDLPAELRALGIEVLFSESPPGI
Ga0310916_101338091	3300031942	Soil	MHLVSKTGAAVIVDTMRPITARHLFVLVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDV
Ga0310913_101548041	3300031945	Soil	MHLVSKTGAAVIVDTMRPITARHLFVLVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVDLPAELRALGIEVLFSKSPLGI
Ga0310913_105123812	3300031945	Soil	MRPITARHLFALVAALIVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIRDQEVIIGESSTRGEFRTEFDRYKDVDLPAERRALGIEVLFSESPPGI
Ga0310910_100515252	3300031946	Soil	MHLVSKTGAAVIVDTMRPITARHLFALVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDADLPAELRALGIEVLFSESPPGI
Ga0310909_105388653	3300031947	Soil	TMRPITARHLFVLVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVDLPAELRALGIEVLFSKSPLGI
Ga0306926_100996244	3300031954	Soil	MHLVSKTGIAILAAAAVAAVIVDTMRPITARHLFALVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGEFRTEFDRYKDVDLPAELCVLGIEVLFSESPPGI
Ga0306926_112100051	3300031954	Soil	HLVSKIGIAIFAAAAVAAVIVDTMRPSAARHLFALVAALIVGVIAFHLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGKFRTEFDRNKDVDLPAELRALGIEVLFSESPLGI
Ga0306922_107089241	3300032001	Soil	MHLVSKTGAAVIVDTMRPITARHLFALVAALIVGVTAFYLVPEPLPELTRAEFLAEVRAGHVRRVEIRDQEVIIAESSTRGKFRTEFDRNKDVDLPAELRALGI
Ga0310911_102362561	3300032035	Soil	MHLVSKTGAAVIVDTMRPITARHLFVLVAALIVGVTAFYLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGKFRTEFDRNKDVDLPAELRA
Ga0318533_110781911	3300032059	Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPSAARHLFALVAALIVGVTAFYLVPEPLPELTRAEFMAEVRAGYVSRVEIEDQEVSIGESSTRGEFGTEFDRNKDVDLPAELRALGIEVLFSESPPGI
Ga0306924_101862552	3300032076	Soil	MHLVSKIGIAIFAAAAVAAVIVDTMRPSAARHLFALVAALIVGVIAFHLVPEPLPELTRAEFMAEVRAGHVRRVEIREQEVIIGESSTRGEFRTEFDRNKDVDLPAELRALGIEVLFSESPPGI
Ga0306924_118308321	3300032076	Soil	MRISASFLSNFVLAVIVGVVAFWFVPKPLPELSRAEFMDEVRAGHVHRVEIEDQEVILSESTTRGPFRTAFDRVRDGGLPDELRAAGVEVWYSKSPPGI
Ga0306920_1007512952	3300032261	Soil	MRVWASTIAKLGIALIAGVMAFWFVPGPLPELSRAEFMNEVRAGHVRRVEIRDQEVILSQSTARGPFHTGFDRVRDTELPDELRALGVEVRFSKSSLGV
Ga0306920_1010559511	3300032261	Soil	MPRIATRHVLAVVAAVITGVTVFYLLPAPLPELTRAEFMAEIRAGHVHRVEIEDQQVIIGESSTRGEFRTDFHRKEDVNLPAELRALGVEVWFSK
Ga0306920_1016297012	3300032261	Soil	MRLSARTIVTLVLAVIAGSVAAWLVPPPLPELSRTEFMDEVRAGHVRRVEIEDQEVILSESTIRGPFRTNFDKVRDAGLPDQLRGLGVEVWFSKFPLGI
Ga0306920_1039879082	3300032261	Soil	MPRIAARLVLAVVAAAIASVTVFYLLPPPLPELTRAEFMSEIRAGHVRRIEIEDQQVIIGESSTRGEFRTDFHRKEDVNLPAELRALGVEVWFSKSPPGI
Ga0310914_116949841	3300033289	Soil	LIAGVMAFWFVPGPLPELSRAEFMNEVRAGHVRRVEIRDQEVILSQSTARGPFHTGFDRVRDTELPDELRALGVEVRFSKSSLGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F062933

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences