Metagenome / Metatranscriptome Family F064134

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064134
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	67 residues
Representative Sequence	MGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI
Number of Associated Samples	92
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.57 %
% of genes near scaffold ends (potentially truncated)	30.23 %
% of genes from short scaffolds (< 2000 bps)	81.40 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.380 % of family members)
Environment Ontology (ENVO)	Unclassified (32.558 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.938 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.56% β-sheet: 0.00% Coil/Unstructured: 60.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF03729	DUF308	6.20
PF16124	RecQ_Zn_bind	4.65
PF04229	GrpB	3.88
PF03633	Glyco_hydro_65C	3.88
PF06210	DUF1003	3.10
PF00274	Glycolytic	3.10
PF00196	GerE	2.33
PF04972	BON	2.33
PF01590	GAF	1.55
PF03636	Glyco_hydro_65N	1.55
PF01544	CorA	1.55
PF00126	HTH_1	1.55
PF13419	HAD_2	1.55
PF00501	AMP-binding	0.78
PF01636	APH	0.78
PF03992	ABM	0.78
PF00005	ABC_tran	0.78
PF05988	DUF899	0.78
PF13535	ATP-grasp_4	0.78
PF03706	LPG_synthase_TM	0.78
PF08044	DUF1707	0.78
PF00881	Nitroreductase	0.78
PF00931	NB-ARC	0.78
PF08240	ADH_N	0.78
PF01988	VIT1	0.78
PF11898	DUF3418	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	6.20
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	5.43
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	3.88
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	3.10
COG4420	Uncharacterized membrane protein	Function unknown [S]	3.10
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	1.55
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1633	Rubrerythrin, includes spore coat protein YhjR	Inorganic ion transport and metabolism [P]	0.78
COG1814	Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 family	Inorganic ion transport and metabolism [P]	0.78
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.14 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	55.81 %
Unclassified	root	N/A	33.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	44.96 %
Unclassified	root	N/A	33.33 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	17.83 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.43 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.10 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.33 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	2.33 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	17.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.43 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.10 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	2.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.33 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	17.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.43 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2.33 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	2.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.33 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	17.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.43 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	2.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.33 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.78 %
Streptomyces violarus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violarus	0.78 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	17.83 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.43 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	2.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.33 %
Arthrobacter sp. ES1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ES1	0.78 %
Frankia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	0.78 %
Streptomyces violarus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violarus	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111022\|2221189213	Not Available	520	Open in IMG/M
3300001614\|JGI20249J16330_101148	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300004463\|Ga0063356_103839350	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300004479\|Ga0062595_100371715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1008	Open in IMG/M
3300005164\|Ga0066815_10056501	All Organisms → cellular organisms → Bacteria → Terrabacteria group	660	Open in IMG/M
3300005332\|Ga0066388_101036912	Not Available	1379	Open in IMG/M
3300005332\|Ga0066388_103185922	Not Available	838	Open in IMG/M
3300005332\|Ga0066388_104801026	Not Available	687	Open in IMG/M
3300005332\|Ga0066388_106176673	Not Available	605	Open in IMG/M
3300005355\|Ga0070671_101963955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	521	Open in IMG/M
3300005434\|Ga0070709_10895075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	701	Open in IMG/M
3300005434\|Ga0070709_11142899	Not Available	624	Open in IMG/M
3300005434\|Ga0070709_11600145	Not Available	530	Open in IMG/M
3300005435\|Ga0070714_101689243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	618	Open in IMG/M
3300005436\|Ga0070713_100112863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2372	Open in IMG/M
3300005436\|Ga0070713_101524433	Not Available	649	Open in IMG/M
3300005437\|Ga0070710_11138194	Not Available	574	Open in IMG/M
3300005439\|Ga0070711_101340924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	621	Open in IMG/M
3300005440\|Ga0070705_101380402	Not Available	587	Open in IMG/M
3300005445\|Ga0070708_100329668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp.	1438	Open in IMG/M
3300005455\|Ga0070663_101655547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	571	Open in IMG/M
3300005456\|Ga0070678_102399097	Not Available	501	Open in IMG/M
3300005591\|Ga0070761_10444888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces violarus	794	Open in IMG/M
3300005615\|Ga0070702_101016997	Not Available	657	Open in IMG/M
3300005713\|Ga0066905_100075485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2190	Open in IMG/M
3300005713\|Ga0066905_100084732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2096	Open in IMG/M
3300005764\|Ga0066903_100640347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1855	Open in IMG/M
3300005764\|Ga0066903_100754068	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300005764\|Ga0066903_101167535	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300005841\|Ga0068863_102479365	Not Available	528	Open in IMG/M
3300006163\|Ga0070715_10704269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	603	Open in IMG/M
3300006175\|Ga0070712_100386123	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300006175\|Ga0070712_100647552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	898	Open in IMG/M
3300006574\|Ga0074056_11803174	Not Available	551	Open in IMG/M
3300006755\|Ga0079222_11784073	Not Available	594	Open in IMG/M
3300006755\|Ga0079222_12275762	Not Available	540	Open in IMG/M
3300006804\|Ga0079221_10174288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1152	Open in IMG/M
3300006804\|Ga0079221_10510764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	783	Open in IMG/M
3300006804\|Ga0079221_11249830	Not Available	580	Open in IMG/M
3300006806\|Ga0079220_10029213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2422	Open in IMG/M
3300006806\|Ga0079220_10316136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	974	Open in IMG/M
3300006806\|Ga0079220_10344039	Not Available	944	Open in IMG/M
3300006806\|Ga0079220_10452518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	859	Open in IMG/M
3300006852\|Ga0075433_10240937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ES1	1605	Open in IMG/M
3300006854\|Ga0075425_100026656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	6379	Open in IMG/M
3300006854\|Ga0075425_100030790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5950	Open in IMG/M
3300006854\|Ga0075425_100497641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1403	Open in IMG/M
3300006904\|Ga0075424_100084447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3336	Open in IMG/M
3300006954\|Ga0079219_10489249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300006954\|Ga0079219_11684802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	586	Open in IMG/M
3300007076\|Ga0075435_100012062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	6387	Open in IMG/M
3300009101\|Ga0105247_10527392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	865	Open in IMG/M
3300009147\|Ga0114129_13349079	Not Available	517	Open in IMG/M
3300009174\|Ga0105241_10925250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	811	Open in IMG/M
3300009545\|Ga0105237_11183021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300009792\|Ga0126374_10008623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3863	Open in IMG/M
3300010046\|Ga0126384_10065813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2558	Open in IMG/M
3300010046\|Ga0126384_10229899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1487	Open in IMG/M
3300010046\|Ga0126384_10944235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300010047\|Ga0126382_11130032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300010048\|Ga0126373_10077090	Not Available	3027	Open in IMG/M
3300010048\|Ga0126373_11773350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300010154\|Ga0127503_10759884	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2178	Open in IMG/M
3300010154\|Ga0127503_11148387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300010360\|Ga0126372_10051059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2800	Open in IMG/M
3300010360\|Ga0126372_13048880	Not Available	520	Open in IMG/M
3300010361\|Ga0126378_10410229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1467	Open in IMG/M
3300010361\|Ga0126378_10903510	Not Available	990	Open in IMG/M
3300010366\|Ga0126379_10417441	Not Available	1394	Open in IMG/M
3300010371\|Ga0134125_13010245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	511	Open in IMG/M
3300010373\|Ga0134128_10104862	All Organisms → cellular organisms → Bacteria	3214	Open in IMG/M
3300010375\|Ga0105239_10883653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1026	Open in IMG/M
3300010376\|Ga0126381_100236976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2463	Open in IMG/M
3300010376\|Ga0126381_101678684	Not Available	918	Open in IMG/M
3300010376\|Ga0126381_103165511	Not Available	651	Open in IMG/M
3300010398\|Ga0126383_12767172	Not Available	573	Open in IMG/M
3300010403\|Ga0134123_11366741	Not Available	747	Open in IMG/M
3300010937\|Ga0137776_1447636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1252	Open in IMG/M
3300011119\|Ga0105246_11735087	Not Available	594	Open in IMG/M
3300012198\|Ga0137364_10145778	All Organisms → cellular organisms → Bacteria	1708	Open in IMG/M
3300012200\|Ga0137382_10268700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1185	Open in IMG/M
3300012202\|Ga0137363_10146046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1853	Open in IMG/M
3300012208\|Ga0137376_10110909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2334	Open in IMG/M
3300012930\|Ga0137407_10918444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	828	Open in IMG/M
3300012948\|Ga0126375_11690954	Not Available	548	Open in IMG/M
3300012961\|Ga0164302_10661420	Not Available	767	Open in IMG/M
3300012971\|Ga0126369_10532939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300012971\|Ga0126369_11289048	Not Available	820	Open in IMG/M
3300012986\|Ga0164304_11091680	Not Available	638	Open in IMG/M
3300012987\|Ga0164307_10264266	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300013307\|Ga0157372_10668735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1209	Open in IMG/M
3300015373\|Ga0132257_102943851	Not Available	620	Open in IMG/M
3300016341\|Ga0182035_11455253	Not Available	616	Open in IMG/M
3300016445\|Ga0182038_11855495	Not Available	544	Open in IMG/M
3300017942\|Ga0187808_10109676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1203	Open in IMG/M
3300019887\|Ga0193729_1132933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	915	Open in IMG/M
3300021181\|Ga0210388_11125608	Not Available	669	Open in IMG/M
3300021402\|Ga0210385_10127632	Not Available	1801	Open in IMG/M
3300021560\|Ga0126371_10040066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4436	Open in IMG/M
3300021560\|Ga0126371_10088744	All Organisms → cellular organisms → Bacteria	3053	Open in IMG/M
3300021560\|Ga0126371_10520976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1337	Open in IMG/M
3300021560\|Ga0126371_10862623	Not Available	1050	Open in IMG/M
3300021560\|Ga0126371_11031250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	963	Open in IMG/M
3300021560\|Ga0126371_12342533	Not Available	645	Open in IMG/M
3300025898\|Ga0207692_11071637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	533	Open in IMG/M
3300025910\|Ga0207684_10048462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3603	Open in IMG/M
3300025911\|Ga0207654_10648611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	756	Open in IMG/M
3300025915\|Ga0207693_11259390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	555	Open in IMG/M
3300025915\|Ga0207693_11303897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	543	Open in IMG/M
3300025928\|Ga0207700_10063395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2811	Open in IMG/M
3300025928\|Ga0207700_10081255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2530	Open in IMG/M
3300025928\|Ga0207700_10105714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2255	Open in IMG/M
3300025929\|Ga0207664_10891881	Not Available	799	Open in IMG/M
3300025939\|Ga0207665_11632352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	511	Open in IMG/M
3300026067\|Ga0207678_10406603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1179	Open in IMG/M
3300026078\|Ga0207702_10069498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3028	Open in IMG/M
3300026340\|Ga0257162_1014293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300026498\|Ga0257156_1020936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1298	Open in IMG/M
3300027765\|Ga0209073_10190289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	776	Open in IMG/M
3300027765\|Ga0209073_10428948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300031231\|Ga0170824_124016790	Not Available	524	Open in IMG/M
3300031720\|Ga0307469_10348113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1243	Open in IMG/M
3300031740\|Ga0307468_100798164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	805	Open in IMG/M
3300031768\|Ga0318509_10524779	Not Available	661	Open in IMG/M
3300032180\|Ga0307471_101831404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	758	Open in IMG/M
3300032783\|Ga0335079_10040739	All Organisms → cellular organisms → Bacteria	5332	Open in IMG/M
3300032828\|Ga0335080_11691258	Not Available	621	Open in IMG/M
3300032955\|Ga0335076_10426925	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300034819\|Ga0373958_0014953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1364	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.17%
Host-Associated	Host-Associated	17.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.07%
Plants	Host-Associated → Plants	17.83%
Aquatic	Environmental → Aquatic	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.88%
Freshwater	Environmental → Aquatic → Freshwater	2.33%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.39%
Loam	Environmental → Terrestrial → Soil → Loam	26.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.10%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.33%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.01%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.83%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.53%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	10.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.10%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300001614	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF015	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222002779	2209111022	Grass Soil	MAYGHAERNLALIRQLEAETRKLLDSLDQLDPEHSAWLQEVISPGRQAAVHQDRLETATASRRSSS
JGI20249J16330_1011482	3300001614	Forest Soil	GHAERNLALIRQLEAETRELLARLDEPDLEQSAWLQEVTSAERQAGHHRRPETATAHPSIF*
Ga0063356_1038393502	3300004463	Arabidopsis Thaliana Rhizosphere	MGYGHAERNLALIRHLDAETRQLLGTLDQLDPEQSVWLREVTSPERQAVHRCRPETAAAPQAI*
Ga0062595_1003717153	3300004479	Soil	MSYRLSEGDTAMGYGHAERNLALIRQLEAETRDLFETLDQPDPEQSAWSEVISPERHAPYRRRPETVAARSAI*
Ga0066815_100565011	3300005164	Soil	MGYGHAERNLALIRRLDAETRELLGTLDQLDPEQSVWLREVTSPERQAVHQYRPETAAAPQAI*
Ga0066388_1010369122	3300005332	Tropical Forest Soil	MAYGHAERNLAVIRQLEAETRKLLGSLDQLDPEQSAWLQDATRPRRQASHQYRPETATASCRSYS*
Ga0066388_1031859222	3300005332	Tropical Forest Soil	MAYGHAERNLALIRQLAAETRELLNTLDQPDPEHLAWLREVIGLERQAVRRQPEPVTAP*
Ga0066388_1048010262	3300005332	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRALLGTLDQPDPEQSVWLQEATKPERQAVHQCRPETATAPQAI*
Ga0066388_1061766731	3300005332	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRELLGTFDQLDREQSAWLQEVTSPERQAVYQRLP
Ga0070671_1019639551	3300005355	Switchgrass Rhizosphere	SEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACSVM*
Ga0070709_108950751	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI*
Ga0070709_111428991	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAYGHAERNLALVRQLNGETRKLLGSLDQLDTEQSAWLQEVTSPGRQAVYQDRPEPATASLARCGSRPSSTPP*
Ga0070709_116001452	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSVM*
Ga0070714_1016892431	3300005435	Agricultural Soil	MGYGHAERNLALIRQLEAETRDLLETLDQPDPEQPAWLQKVTSAERQALHQRRPETVTACSAM*
Ga0070713_1001128631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAYGHAERNLALVRQLNAETRKLLGSLDQLDTEQSAWLQEVTSPGRQAVYQDRPEPATASLARCGSRPSSTPP*
Ga0070713_1015244332	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGYGHAERNLALIRQLEAETRDLFETLDQPDPEQSAWSEVISPERHAPYRRRPETVAARSAI*
Ga0070710_111381941	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI*
Ga0070711_1013409241	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSVM*
Ga0070705_1013804021	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQ
Ga0070708_1003296682	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAYGHAERNLALIRQLEAETRKLLGSLDQLDPEQSAWLQEVISPGRRAVHQDRLETATASRRSSS*
Ga0070663_1016555472	3300005455	Corn Rhizosphere	GYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI*
Ga0070678_1023990971	3300005456	Miscanthus Rhizosphere	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI*
Ga0070761_104448882	3300005591	Soil	MGYGHAERNLALIRQLEAETRELLARLDEPDLEQSAWLQEVTSAERQAGHHRRPETATAHPSIF*
Ga0070702_1010169971	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MSHRSSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRWPETVTACPAI*
Ga0066905_1000754851	3300005713	Tropical Forest Soil	GYGHAERNLALIRQLEAETRQLLNTLDQLDPEQSAWLQVVTSPESQAVHRRRPETVPQAICSTALSTRPSLN*
Ga0066905_1000847321	3300005713	Tropical Forest Soil	GYGHAERNLALIRQLEAETRQLLNTLDQLDPEQSAWLQVVTSPESQAVHQCRPETLPQAIGW*
Ga0066903_1006403473	3300005764	Tropical Forest Soil	MAYGHAERNLALIRQLAAETRELLNTLDQPDPEHLAWLREVIGLERHAVQRQPEPVTAP*
Ga0066903_1007540683	3300005764	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRDLLDTLDQLDFEQSAWWQEVSGLEGRAVHQRWPETATVP
Ga0066903_1011675351	3300005764	Tropical Forest Soil	MAYGHAERNLALIRQLAAETRELPNALDQPDPEYSAWLQEVTGLERQAVHQRRPEPITAP
Ga0068863_1024793652	3300005841	Switchgrass Rhizosphere	MSHRSSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEATSPERPALHQRRPET
Ga0070715_107042691	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSVM*
Ga0070712_1003861232	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAYGHAERNLALIRQLEAETRKLLGSLNHLNPEESAWLQEVTGPRSQAGHQYRPEPVSSSSSRGR*
Ga0070712_1006475522	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAYGHAERNLALIRQLEAETRKLLGSLDQLDLEQSAWLQEITSPGRQAVHPDRHDTATASGRSSS*
Ga0074056_118031741	3300006574	Soil	MGYGHAERNLALIRHLDAETRELLGTLDQLDPEQSVWLREVTSPERQAVHQYRPETAAAPQAI*
Ga0079222_117840731	3300006755	Agricultural Soil	MAYGHAERNLALIHQLEAETMNLLGSVKQPDSEQSAWLQEITRPDKQAVHQRRP
Ga0079222_122757622	3300006755	Agricultural Soil	MAYGHAERNLAQIRRLEAETRKLLGSLDQLDPEQSAWSQEVPGPGRQAIHQYRPETATASRRSSS*
Ga0079221_101742883	3300006804	Agricultural Soil	MAYGHAERNLALVRQLNAETRKLLGSLDQLDTEQSAWLQEVTSPGSQAVYQDRPEPATASLARCGSRPSSTPP*
Ga0079221_105107642	3300006804	Agricultural Soil	MGYGHAERNLALIRQLEAETRDLLETSDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI*
Ga0079221_112498301	3300006804	Agricultural Soil	MAYGHAERNLALIRQLEAETRKLLGNLDQLDPEQSAWSQEVTSPGRQAIHEYRPETATVSRRSYS*
Ga0079220_100292133	3300006806	Agricultural Soil	MAYGHAERNLAQIRQLEAETRKLLGSLDQLDPEQSAWSQEAPGPGRQAIHQYRPETATASRRSSS*
Ga0079220_103161362	3300006806	Agricultural Soil	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQTLHQRRPETVTACSVM*
Ga0079220_103440392	3300006806	Agricultural Soil	MGYGHAERNLALIRQLEAETRELLGALDQPDPEQSSWLQEVTSPERQAVHQRRPETATAPIKQEMLHLALNTNI*
Ga0079220_104525182	3300006806	Agricultural Soil	MAYGHAERNLALIHQLEAETMNLLGSVKQPDSEQSAWLQEITRPDKQAVHQRRPATERKSRSSS*
Ga0075433_102409374	3300006852	Populus Rhizosphere	MGYGHAERNLALIRQLEAQTRDLLETLDQPDPEQSAWLQEVISPERHAPYRRRPETVTARSAI*
Ga0075425_1000266567	3300006854	Populus Rhizosphere	MAYGHAERNLAQIRQLEAETRKLLGSLDQLDPEQSAWSQEVPGPGRQAIHQYRPETATASRRSSS*
Ga0075425_1000307903	3300006854	Populus Rhizosphere	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPEQPAWLQKVTSAERQALHQRRPETVTACSAM*
Ga0075425_1004976412	3300006854	Populus Rhizosphere	MGYGHAERNLALIRQLEAQTRDLLETLDQPDPEQSAWLQEVISPERHAPYRRRPETVAARSAI*
Ga0075424_1000844472	3300006904	Populus Rhizosphere	MSYRLSEGDTGMGYGHAERNLALIRQLEAQTRDLLETLDQPDPEQSAWLQEVISPERHAPYRRRPETVTARSAI*
Ga0079219_104892491	3300006954	Agricultural Soil	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRELLETLDQPDPEQSAWLQEVTSPERQALHQRRPETVTACPAI*
Ga0079219_116848021	3300006954	Agricultural Soil	RIMAYGHAERNLALIHQLEAETMNLLGSVKQPDSEQSAWLQEITRPDKQAVHQRRPATERKSRSSS*
Ga0075435_1000120623	3300007076	Populus Rhizosphere	MAYGHAERNLAQIRRLEAETRKLLGSLDQLDPEQSAWSQEVPGPGRQAIHQYRPETATASRRSSP*
Ga0105247_105273922	3300009101	Switchgrass Rhizosphere	MSHRSSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI*
Ga0114129_133490792	3300009147	Populus Rhizosphere	MAYGHAERNLAQIRQLEAETRKLLGSLDQLDPEQSAWSREVPGPGRQAIHQYRPETATASRRSSS*
Ga0105241_109252501	3300009174	Corn Rhizosphere	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSAM*
Ga0105237_111830211	3300009545	Corn Rhizosphere	MSHRSSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQPAWLQKVTSAERQALHQRRPETVTACSAM*
Ga0126374_100086235	3300009792	Tropical Forest Soil	MAYGHAERNLALIRQLAAETRELLNTLDQPDLEHLAWLRQVIGLERQAVHQRQPEPVTAP
Ga0126384_100658134	3300010046	Tropical Forest Soil	MAYGHAERNLALIRQLEAETRNLLASLDQPDPEQSAWLQEITSPNKLAVRQYWPETAAASSF*
Ga0126384_102298992	3300010046	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRQLLNTLDQLDPEQSAWLQVVTSPESQAVHQCRPETLPQAIGW*
Ga0126384_109442352	3300010046	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRALLGRLDQPDPEQSAWLQEATRPERQAVHQCRPETATAPQAI*
Ga0126382_111300322	3300010047	Tropical Forest Soil	YGHAERNLALIRQLEAETRQLLNTLDQLDPEQSAWLQVVRSPESQAVHQCRPETLPQAIGW*
Ga0126373_100770902	3300010048	Tropical Forest Soil	MAYGHAERNLALIRQLAAETRELLNTLDQLDPEHLAWLREVIGPERQAVTSAAPNQ*
Ga0126373_117733501	3300010048	Tropical Forest Soil	MGYGHAERNLALIRQLEAETTALLGTLDQSDPEQSVWLQEATKPERQAVHQCRPETATAPQAI*
Ga0127503_107598841	3300010154	Soil	MSHRLSQGDTAMGYGHAERNLALIRQLEAETRELLGTLDQPDPEQSAWLQEITSPERQPLHRRWPETVTARSAM*
Ga0127503_111483871	3300010154	Soil	PRPSKMSHRLSQGDTAMGYGHAERNLALIRQLEAETRELLGTLDQPDPEQSAWLQQVTSPERRAVHQCRPETATAPIKQEMLHLALSTSI*
Ga0126372_100510593	3300010360	Tropical Forest Soil	MAYGHAERNLALIRQLEAETRKLLGSLDQRDPEQSAWLQEVTRPRRQAGHQYRPETATAPCRSSS*
Ga0126372_130488801	3300010360	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRELVGTLDQPDPEQSAWLQEVTSPERQAVHRLRPETATAPIRQEMWHWALGRSI*
Ga0126378_104102292	3300010361	Tropical Forest Soil	MSYGHAERNLALIRQLETETRKLLGGLDQPDPEQSAWLQEVASPGKHAAHEHRPGTATVAGAA*
Ga0126378_109035101	3300010361	Tropical Forest Soil	MAYGHAERNLALIRQLEAETRKLLGSLNQLDPEQSAWLQGVASPRRQTGNHHQPTHRRVAPR*
Ga0126379_104174412	3300010366	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRALLGTLDQPDPEQSAWLHEVISPERQAVHHCRPETATAPQAI*
Ga0134125_130102452	3300010371	Terrestrial Soil	SEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPEQPAWLQKVTSAERQALHQRRPETVTACSAM*
Ga0134128_101048621	3300010373	Terrestrial Soil	GSPRPSKMSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSVM*
Ga0105239_108836532	3300010375	Corn Rhizosphere	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRP
Ga0126381_1002369763	3300010376	Tropical Forest Soil	MAYGHAERNLALIRQLEAETRKLLGSLNQLDPEQSAWLQEVTGPRRQAIQQYRPESVSSSSSRGWEFLR*
Ga0126381_1016786842	3300010376	Tropical Forest Soil	MGYGHAERNLALIRQLAAETRELPNALDQPDPEYSAWLQEVTGLERQAVHQRRPEPIAAP
Ga0126381_1031655111	3300010376	Tropical Forest Soil	MGYGHAERNLALIRQLAAETRELLNTLDQPDPEHLAWLREIIGPERQA
Ga0126383_127671721	3300010398	Tropical Forest Soil	MGYGHAERNLALIRELEAETRELVGTLDQPDPEQSAWLQGVTSPERQAVHRLRPETATAPIRQEMWHWALGRSI*
Ga0134123_113667411	3300010403	Terrestrial Soil	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACPAI*
Ga0137776_14476362	3300010937	Sediment	MAYGHAERNLTLIRQLETETRKLLGSLNQLDPEQSAWLHEVTGPSGRASQQYRPESAGSSSLRGRELLR*
Ga0105246_117350872	3300011119	Miscanthus Rhizosphere	MSHRSSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPE
Ga0137364_101457784	3300012198	Vadose Zone Soil	ERAMAYGHAERNLAQIRQLEAETRKLLGSLDQLDPEQSAWSQEVPGPGRQAIHQYRPETATASRRSSS*
Ga0137382_102687001	3300012200	Vadose Zone Soil	MAYGHAERNLAEIRQLEAETRNLLGSLDQLDPEHSAWLQEVISPGRQAAVHQDRLETATASRRSSS*
Ga0137363_101460463	3300012202	Vadose Zone Soil	MGYGHAERNLALIRQLEAETRELLGTLDQPDPEQSAWLQEVTSPERRPVHQCGPETATAPIKQEMPHLALSTSI*
Ga0137376_101109092	3300012208	Vadose Zone Soil	MAYRHAERNLAEIRQLEAETRKLLGSLDQLDPEHSAWLQEVISPGRQAAVHQDRLETATASRRSSS*
Ga0137407_109184441	3300012930	Vadose Zone Soil	MGYGHAERNLALIRQLEAETRELLGTLDQPDPEQSAWLQEVTSPERRAVHQCGPETATAPIKQEMLHLALSTSI*
Ga0126375_116909541	3300012948	Tropical Forest Soil	MAYGHAERNLALIRQLEAETGNLLASLDQPDPEQSAWLQEITSPNKQAVHQHRPETAAASSF*
Ga0164302_106614202	3300012961	Soil	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRNLLETLDQLDPEQTAWLQEVTSPERQALHQRWPETVTACPAI*
Ga0126369_105329392	3300012971	Tropical Forest Soil	MPHRLKGGTAMGYGHAERNLALIRQLEAETMALLGTLDQPDPEQAAWLQKAISAERQAVRQRRPQTATAAPQAV*
Ga0126369_112890481	3300012971	Tropical Forest Soil	MAYRLSQGDTAMGYGHAERNLALIRQLEAETRALLGTLDQPDPEQSVWLREATRPERQAVHQC
Ga0164304_110916802	3300012986	Soil	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPEQSAWLQEITSPERQPLHRRWPETV
Ga0164307_102642663	3300012987	Soil	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERQALHQRWPETVTACPAI*
Ga0157372_106687352	3300013307	Corn Rhizosphere	MSHRSSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSVM*
Ga0132257_1029438512	3300015373	Arabidopsis Rhizosphere	MGYGHAERNLALIRQLEAETRGLLGTLDQPDPEQSAWLQEASSPERQAVQQCRSETTTTPIKQEMLHLARSTNI*
Ga0182035_114552532	3300016341	Soil	MAYGHAERNLTLIRQLEAETRKLLGSLNQLDPEQSAWLHEVAGPRRQAGHQYQPEPASAIGRECRNGGSVN
Ga0182038_118554952	3300016445	Soil	MAYGHAERNLTLIRQLEAETRKLLGSLNQLDPEQSAWLHEVAGPRRQAGHQYQPEPASAIGRECRNGGSVNSNRGSTSR
Ga0187808_101096762	3300017942	Freshwater Sediment	MGYGHAERNLALIRQIEAETRDLLGTLDQLDPEQSAWLQEIISPQRRALHQFRAETVTAR
Ga0193729_11329331	3300019887	Soil	MGYGHAERNLALIRQLEAETRELLGTLDEPDPEQSAWLQEVTSPEWRAVHQCRPETATAPIKQEMLHLALSTSI
Ga0210388_111256081	3300021181	Soil	MGYGHAERNLALIRQLEAETRELLARLDEPDLEQSAWLQEVTSAERQAGHHRRPETATAHPSIF
Ga0210385_101276321	3300021402	Soil	MGYGHAERNLALIRQLEAETRELLARLDEPDLEQSAWLQEVTSAERQAGHHRRPETATAHPSTF
Ga0126371_100400661	3300021560	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRALLGTLDQPDPEQSVWLQEATKPERQAVHQCRPETATAPQAI
Ga0126371_100887445	3300021560	Tropical Forest Soil	MAYGHAERNLALIRQLEAETRKLLGGLNQLDPEQSGWLQEVASPRRQASQRYRPESASSGSSRAQELVR
Ga0126371_105209762	3300021560	Tropical Forest Soil	MAYGHAERNLALIRQLAAETRELLNTLDQLDPEHLAWLREVIGPERQAVTSAAPNQ
Ga0126371_108626231	3300021560	Tropical Forest Soil	MGYGHAERNLALIRQLEAETRALLGTLDQPDPEQSAWLHEVISPERQAVHHCRPETATAPQAI
Ga0126371_110312501	3300021560	Tropical Forest Soil	MAYGHAERNLALIRQLAAETRELLNTLDQPDPEHLAWLREVIGLERHAVQRQPEPVTAP
Ga0126371_123425331	3300021560	Tropical Forest Soil	MAYGHAERNLALIRQLEAETRKLLGSLNQLDPEQSAWLQEVTGPRRQAIQQYRPESVSSSSSRGWEFLR
Ga0207692_110716372	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	GSPRPSKMSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSVM
Ga0207684_100484623	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MAYGHAERNLALIRQLEAETRKLLGSLDQLDPEQSAWLQEVISPGRRAVHQDRLETATASRRSSS
Ga0207654_106486112	3300025911	Corn Rhizosphere	MGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRWPETVTACPAI
Ga0207693_112593901	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VASDGTDGSPRPSKMSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPEQPAWLQKVTSAERQALHQRRPETVTACSAM
Ga0207693_113038971	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VASDGTDGSPRPSKMSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSVM
Ga0207700_100633951	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAYGHAERNLALVRQLNAETRKLLGSLDQLDTEQSAWLQEVTSPGRQAVYQDRPEPATASLARCGSRPSSTPP
Ga0207700_100812553	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERQALHQRRPETVTACSVM
Ga0207700_101057143	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MAYGHAERNLALIRQLEAETRKLLGSLNHLNPEESAWLQEVTGPRSQAGHQYRPEPVSSSSSRGR
Ga0207664_108918811	3300025929	Agricultural Soil	MAYGHAERNLALIRQLEAETRKLLGSLNHLNPEESAWLQEVTGPRSQAGHQYRPEPVSSS
Ga0207665_116323522	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	DTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI
Ga0207678_104066032	3300026067	Corn Rhizosphere	MSHRLSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRRPETVTACPAI
Ga0207702_100694986	3300026078	Corn Rhizosphere	MGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRWPETVTA
Ga0257162_10142933	3300026340	Soil	RHAAMGYGHAERNLALIRQLEAETRELLGTLDQPDPEQSAWLQEVTSPERRAVHQCGPETATAPIKQEMLHLALSTSI
Ga0257156_10209363	3300026498	Soil	MGYGHAERNLALIRQLEAETRELLGTLDQPDPEQSAWLQEVTSPERRAVHQCGPETATAPIKQEMLHLALSTSI
Ga0209073_101902891	3300027765	Agricultural Soil	MAYGHAERNLALIHQLEAETMNLLGSVKQPDSEQSAWLQEITRPDKQAVHQRRPATERKSRSSS
Ga0209073_104289481	3300027765	Agricultural Soil	MAYGHAERNLALIRQLEAETRKLLGSLDQPDPEQSAWSQEITSAGRQAVHPDRHDTA
Ga0170824_1240167902	3300031231	Forest Soil	MAYGHAERNLALIRQLEAETRKLLGSLDQLDPEHSAWLQEVISPGRQAAVHQDRLETATASRRSSS
Ga0307469_103481131	3300031720	Hardwood Forest Soil	MGYGHAERNLALIRQLEAETRDLLETLDQPDPEQSAWLQEVTSPERQALHQRWPETVTACPAI
Ga0307468_1007981642	3300031740	Hardwood Forest Soil	MGYGHAERNLALIRQLEAETRDLLETLDQPDPGQSAWLQKVTSAERRALHQRRPETVTACPAI
Ga0318509_105247792	3300031768	Soil	MAYGHAERNLTLIRQLEAETRKLLGSLNQLDPEQSAWLHEVAGPRRQAGHQYRPE
Ga0307471_1018314042	3300032180	Hardwood Forest Soil	MGYGHAERNLALIRRLEAETRELLGTLDQLDPEQSAWLQEVTRRERQAVHRCWPDTATATHSRGQYH
Ga0335079_100407396	3300032783	Soil	MGYGHAERNLALIRQLEAETRELLGALDQPDPEQSSWLQEVTSPERQAVHQRRPETATAPIKQEMLHLALNTNI
Ga0335080_116912582	3300032828	Soil	MGYGHAERNLALIRQLEAETRELLGTLDQPDPEQSAWLQEIASPERRAPSRFGPKTVMAPQAI
Ga0335076_104269252	3300032955	Soil	MSHRLSEEDTAMGYGHAERNLALIRRLEAETRDLLETLDQPDPEQSAWLQEITSPERQALHRRRPETVTACSAV
Ga0373958_0014953_1027_1251	3300034819	Rhizosphere Soil	MSHRSSEGDTAMGYGHAERNLALIRQLEAETRDLLETLDQLDPEQSAWLQEVTSPERPALHQRWPETVTACPAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064134

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences