NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F064546

Metagenome / Metatranscriptome Family F064546

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064546
Family Type Metagenome / Metatranscriptome
Number of Sequences 128
Average Sequence Length 42 residues
Representative Sequence DPDIRKEFEAALAREGVASRMNPEFYQRPPAEGEVVMGDVM
Number of Associated Samples 111
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.22 %
% of genes from short scaffolds (< 2000 bps) 94.53 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (80.469 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(21.875 % of family members)
Environment Ontology (ENVO) Unclassified
(22.656 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.094 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.64%    β-sheet: 0.00%    Coil/Unstructured: 75.36%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF01717Meth_synt_2 28.12
PF00691OmpA 10.94
PF01977UbiD 6.25
PF03401TctC 5.47
PF02518HATPase_c 1.56
PF09585Lin0512_fam 1.56
PF05685Uma2 1.56
PF00072Response_reg 0.78
PF13561adh_short_C2 0.78
PF13432TPR_16 0.78
PF04055Radical_SAM 0.78
PF12705PDDEXK_1 0.78
PF05899Cupin_3 0.78
PF02371Transposase_20 0.78
PF07724AAA_2 0.78
PF01315Ald_Xan_dh_C 0.78
PF00528BPD_transp_1 0.78
PF01075Glyco_transf_9 0.78
PF05150Legionella_OMP 0.78
PF04909Amidohydro_2 0.78
PF01208URO-D 0.78
PF07883Cupin_2 0.78
PF00881Nitroreductase 0.78
PF07730HisKA_3 0.78
PF10431ClpB_D2-small 0.78
PF02653BPD_transp_2 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 28.12
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 6.25
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 5.47
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 1.56
COG0407Uroporphyrinogen-III decarboxylase HemECoenzyme transport and metabolism [H] 0.78
COG0859ADP-heptose:LPS heptosyltransferaseCell wall/membrane/envelope biogenesis [M] 0.78
COG3547TransposaseMobilome: prophages, transposons [X] 0.78
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.78
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.78
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.78
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.78


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms81.25 %
UnclassifiedrootN/A18.75 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2044078001|ZMR_F548DK202GRL3YAll Organisms → cellular organisms → Bacteria → Proteobacteria503Open in IMG/M
3300001661|JGI12053J15887_10590831Not Available528Open in IMG/M
3300005363|Ga0008090_10113445All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300005435|Ga0070714_101881814All Organisms → cellular organisms → Bacteria → Proteobacteria584Open in IMG/M
3300005542|Ga0070732_10415958All Organisms → cellular organisms → Bacteria → Proteobacteria812Open in IMG/M
3300005712|Ga0070764_10859297Not Available567Open in IMG/M
3300005764|Ga0066903_100085347All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4154Open in IMG/M
3300005764|Ga0066903_100703521All Organisms → cellular organisms → Bacteria → Proteobacteria1782Open in IMG/M
3300005764|Ga0066903_108229683All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300006052|Ga0075029_101329693All Organisms → cellular organisms → Bacteria → Proteobacteria505Open in IMG/M
3300006162|Ga0075030_100368237All Organisms → cellular organisms → Bacteria → Proteobacteria1146Open in IMG/M
3300006796|Ga0066665_11462562All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300006853|Ga0075420_101368392All Organisms → cellular organisms → Bacteria → Proteobacteria607Open in IMG/M
3300006865|Ga0073934_10702794All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300007076|Ga0075435_100610570Not Available946Open in IMG/M
3300009038|Ga0099829_11668606All Organisms → cellular organisms → Bacteria → Proteobacteria525Open in IMG/M
3300009088|Ga0099830_10584128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium916Open in IMG/M
3300009090|Ga0099827_10252601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1482Open in IMG/M
3300009100|Ga0075418_11948051All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300009137|Ga0066709_100362676All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1996Open in IMG/M
3300009147|Ga0114129_12037430All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales693Open in IMG/M
3300009792|Ga0126374_11083952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium634Open in IMG/M
3300009792|Ga0126374_11312080All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium585Open in IMG/M
3300010045|Ga0126311_10085875All Organisms → cellular organisms → Bacteria → Proteobacteria2126Open in IMG/M
3300010359|Ga0126376_10804696Not Available918Open in IMG/M
3300010359|Ga0126376_11722338All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales662Open in IMG/M
3300010360|Ga0126372_11236785All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium773Open in IMG/M
3300010362|Ga0126377_11210030All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales826Open in IMG/M
3300010362|Ga0126377_11489896All Organisms → cellular organisms → Bacteria → Proteobacteria750Open in IMG/M
3300010362|Ga0126377_13383539All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales516Open in IMG/M
3300010362|Ga0126377_13618566Not Available500Open in IMG/M
3300010366|Ga0126379_10383218Not Available1448Open in IMG/M
3300010366|Ga0126379_12197410All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium653Open in IMG/M
3300010376|Ga0126381_102337803All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium767Open in IMG/M
3300010376|Ga0126381_102948773All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium677Open in IMG/M
3300010398|Ga0126383_11882031Not Available686Open in IMG/M
3300010398|Ga0126383_12105953All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium651Open in IMG/M
3300010401|Ga0134121_11204604All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium757Open in IMG/M
3300010403|Ga0134123_11757153All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300011120|Ga0150983_15872468All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1694Open in IMG/M
3300012189|Ga0137388_10835818All Organisms → cellular organisms → Bacteria → Proteobacteria853Open in IMG/M
3300012189|Ga0137388_11734230All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium558Open in IMG/M
3300012199|Ga0137383_10758361All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium708Open in IMG/M
3300012205|Ga0137362_10802941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium806Open in IMG/M
3300012208|Ga0137376_11206840Not Available646Open in IMG/M
3300012212|Ga0150985_117773192All Organisms → cellular organisms → Bacteria → Proteobacteria531Open in IMG/M
3300012361|Ga0137360_11728205All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium531Open in IMG/M
3300012392|Ga0134043_1284407Not Available521Open in IMG/M
3300012931|Ga0153915_12952738Not Available554Open in IMG/M
3300012951|Ga0164300_10249598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium900Open in IMG/M
3300012971|Ga0126369_10419981All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1380Open in IMG/M
3300012971|Ga0126369_12122671All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales649Open in IMG/M
3300012989|Ga0164305_11154586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium668Open in IMG/M
3300014166|Ga0134079_10417231All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium628Open in IMG/M
3300014168|Ga0181534_10795503Not Available559Open in IMG/M
3300014200|Ga0181526_10108766Not Available1773Open in IMG/M
3300014325|Ga0163163_13309338Not Available502Open in IMG/M
3300015242|Ga0137412_11058516All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300015245|Ga0137409_10378500All Organisms → cellular organisms → Bacteria → Proteobacteria1229Open in IMG/M
3300015245|Ga0137409_11490491Not Available524Open in IMG/M
3300015264|Ga0137403_10965945All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales700Open in IMG/M
3300016270|Ga0182036_11698753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860533Open in IMG/M
3300016357|Ga0182032_10884370All Organisms → cellular organisms → Bacteria → Proteobacteria759Open in IMG/M
3300017965|Ga0190266_10545226All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria688Open in IMG/M
3300018062|Ga0187784_10412698Not Available1091Open in IMG/M
3300018422|Ga0190265_11350216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium829Open in IMG/M
3300020016|Ga0193696_1062455All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium976Open in IMG/M
3300020583|Ga0210401_10648650All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300021377|Ga0213874_10231611All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300021401|Ga0210393_10902493All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300021402|Ga0210385_10335022All Organisms → cellular organisms → Bacteria → Proteobacteria1127Open in IMG/M
3300021402|Ga0210385_10726810All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. ctwzt2760Open in IMG/M
3300021420|Ga0210394_10817066All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300021420|Ga0210394_11218607Not Available646Open in IMG/M
3300021479|Ga0210410_10483916Not Available1106Open in IMG/M
3300024347|Ga0179591_1076023All Organisms → cellular organisms → Bacteria → Proteobacteria2903Open in IMG/M
3300025457|Ga0208850_1078813All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300025862|Ga0209483_1166503All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300025927|Ga0207687_11804059All Organisms → cellular organisms → Bacteria → Proteobacteria523Open in IMG/M
3300025929|Ga0207664_11526553All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300025936|Ga0207670_10686209All Organisms → cellular organisms → Bacteria → Proteobacteria847Open in IMG/M
3300026067|Ga0207678_10399888All Organisms → cellular organisms → Bacteria → Proteobacteria1189Open in IMG/M
3300026088|Ga0207641_11966143All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300027663|Ga0208990_1089155Not Available868Open in IMG/M
3300027671|Ga0209588_1179996All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium663Open in IMG/M
3300027748|Ga0209689_1156030All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1083Open in IMG/M
3300027882|Ga0209590_10267103All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1094Open in IMG/M
3300027895|Ga0209624_10850704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae597Open in IMG/M
3300027903|Ga0209488_10067217All Organisms → cellular organisms → Bacteria → Proteobacteria2654Open in IMG/M
3300027903|Ga0209488_10200018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1505Open in IMG/M
3300027961|Ga0209853_1148835All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300028771|Ga0307320_10061954Not Available1391Open in IMG/M
3300028791|Ga0307290_10023788Not Available2148Open in IMG/M
3300028796|Ga0307287_10060753All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1400Open in IMG/M
3300028884|Ga0307308_10404544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei654Open in IMG/M
3300028906|Ga0308309_10821305All Organisms → cellular organisms → Bacteria808Open in IMG/M
3300030990|Ga0308178_1078171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium668Open in IMG/M
3300031198|Ga0307500_10076626All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300031562|Ga0310886_11061407Not Available521Open in IMG/M
3300031572|Ga0318515_10285749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium884Open in IMG/M
3300031573|Ga0310915_10255064All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1234Open in IMG/M
3300031668|Ga0318542_10364923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium743Open in IMG/M
3300031708|Ga0310686_108637621All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales527Open in IMG/M
3300031724|Ga0318500_10266629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium833Open in IMG/M
3300031736|Ga0318501_10540034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium637Open in IMG/M
3300031751|Ga0318494_10530354All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium687Open in IMG/M
3300031769|Ga0318526_10380585All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium577Open in IMG/M
3300031771|Ga0318546_10542020All Organisms → cellular organisms → Bacteria817Open in IMG/M
3300031780|Ga0318508_1211142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium556Open in IMG/M
3300031781|Ga0318547_10080700All Organisms → cellular organisms → Bacteria → Proteobacteria1821Open in IMG/M
3300031797|Ga0318550_10148754All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1124Open in IMG/M
3300031832|Ga0318499_10147742All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300031890|Ga0306925_11685812All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300031893|Ga0318536_10009792All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4062Open in IMG/M
3300031893|Ga0318536_10700156All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium504Open in IMG/M
3300031894|Ga0318522_10018951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2207Open in IMG/M
3300031896|Ga0318551_10900154All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium516Open in IMG/M
3300031912|Ga0306921_11832805All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300031945|Ga0310913_10288768Not Available1156Open in IMG/M
3300031954|Ga0306926_11318864All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300031981|Ga0318531_10562475All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300032013|Ga0310906_10523290Not Available806Open in IMG/M
3300032043|Ga0318556_10512155All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium627Open in IMG/M
3300032060|Ga0318505_10608358Not Available514Open in IMG/M
3300032068|Ga0318553_10699180All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium530Open in IMG/M
3300032160|Ga0311301_11782569All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300032892|Ga0335081_10654679All Organisms → cellular organisms → Bacteria → Proteobacteria1284Open in IMG/M
3300034680|Ga0370541_030270All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales649Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil21.88%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil14.06%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil13.28%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.16%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.91%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.12%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.12%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.34%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.56%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.56%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.56%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.56%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.56%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.78%
Hot Spring SedimentEnvironmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment0.78%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.78%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.78%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.78%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.78%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.78%
Switchgrass, Maize And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass, Maize And Miscanthus Rhizosphere0.78%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.78%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.78%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2044078001Maize rhizosphere soil microbial communities from University of Illinois Energy Farm, Urbana, ILHost-AssociatedOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006865Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaGEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021377Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025457Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027961Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030990Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031198Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031797Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031894Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300034680Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ZMR_6615802044078001Switchgrass, Maize And Miscanthus RhizosphereVATQSPYHMEDPAIRREFEAELGREGVASRMNPAWYERAPTEGEDLPPNM
JGI12053J15887_1059083113300001661Forest SoilEDPAVRKEFEEALKREGVASRMNREFYQRPPAEGEAVMDDVM*
Ga0008090_1011344513300005363Tropical Rainforest SoilEDPAIRTEFEAALAREGVASRMNPEFYQRPPAAGETVMGDVM*
Ga0070714_10188181413300005435Agricultural SoilYHQEDPAIRREFSEALAREGVASRMNPEFYERPPGEGEEVMGDVM*
Ga0070732_1041595813300005542Surface SoilDPFIRQEFSETLKREGLANRMNPEFYDRPPAEGEVVIGDVM*
Ga0070764_1085929723300005712SoilIRQEFEAILKREGLPSRMNPEFYERPPGEGEVVMGDVM*
Ga0066903_10008534763300005764Tropical Forest SoilEFAQALAREGVASRMNPEFYQRPPGAGEEVMGDVM*
Ga0066903_10070352133300005764Tropical Forest SoilPYHQEDPAIRKEFQAALAKEGVKSRMNPEFYERPPAEGEVVMGDVM*
Ga0066903_10822968323300005764Tropical Forest SoilSAIPYHQEDPAIRTEFEAALAREGVASRMNPEFYQRPPAEGEVVMGDVM*
Ga0075029_10132969313300006052WatershedsIPYHQEDPAIRQEFAETLAREGVASRMNPEFYERPPGEGEEVMGDVM*
Ga0075030_10036823733300006162WatershedsHQEDPAIRQEFGQALARAGVASRMNPEFYQRPPGEGEEVMGDVM*
Ga0066665_1146256213300006796SoilIPYHQEDPAIRKEFEQALKREGVASRMNPEFYQRPPAEGEVVMGDVM*
Ga0075420_10136839223300006853Populus RhizosphereMEDPAIRAEFDATLRREGMTSRMKEAWYERPPTEGEDLPPNM*
Ga0073934_1070279423300006865Hot Spring SedimentFEERLAREGVKSRMNPEFYERPPAEGETVMGDVM*
Ga0075435_10061057033300007076Populus RhizosphereFTEALNREGVACRMNPEFYERPPAEGEVVMGDVM*
Ga0099829_1166860623300009038Vadose Zone SoilAIPYHQEDPAIRAEFEQALRREGVASRMNPEFYQRPAAEGEVVMGDVM*
Ga0099830_1058412813300009088Vadose Zone SoilAIPYHEEDLAIRREFEGALACEGLVSRMKPEFYQRPPAEGEMVMGDVM*
Ga0099827_1025260113300009090Vadose Zone SoilSAIPYHQEDPAIRKEFEEALKREGVASRMNAEFYQRPPAEGEVVMGDVM*
Ga0075418_1194805123300009100Populus RhizosphereFEERLAREGVKSRMNPEFYERPPGEGEVVMGDVM*
Ga0066709_10036267613300009137Grasslands SoilQEDPAIRTKFQKAPAREGVANRKNQEIYQRPPPEGEVVVGDVM*
Ga0114129_1203743023300009147Populus RhizosphereHQEDPYIRQEFTEALKREGVACRMNPEFYERPPAEGEVVMGDVM*
Ga0126374_1108395213300009792Tropical Forest SoilSAIPYHQEDPAIRTEFEAALAREGVASRMNPEFYQRPPAAGEVVMGDVM*
Ga0126374_1131208013300009792Tropical Forest SoilQEDPAIRKEFEQALAREGVASRMNPEFYERPPGEGEVVMGDVM*
Ga0126311_1008587513300010045Serpentine SoilHLEDPAVRAEYEERLKREGVTPRMNPEFYKRPPGEGEEVVGDVM*
Ga0126376_1080469623300010359Tropical Forest SoilFIEALKREGIDCRMNPEFYERPPAEGEVVMGDVM*
Ga0126376_1172233823300010359Tropical Forest SoilPYHQEDPAIRKEFQEALKKEGIESRMNPEFYERPPAEGEVVMGDVM*
Ga0126372_1123678513300010360Tropical Forest SoilAIPYHQEDPAIRAEFQAALAREGVASRMNPEFYERPQGEGEVVIGDVM*
Ga0126377_1121003013300010362Tropical Forest SoilHMEDPAIRKEFEATLAREGVASRMNPAFYERPPAEGEEVPPDM*
Ga0126377_1148989613300010362Tropical Forest SoilIRKEFTEALKREGIECRMNPEFYERPPAEGEVVMGDVM*
Ga0126377_1338353923300010362Tropical Forest SoilKEFIEALKREGIDCRMNPEFYERPPAEGEVVMGDVM*
Ga0126377_1361856623300010362Tropical Forest SoilHQEDPYIRKEFIEALKREGIECRMNPEFYERPPAEGEVVMGDVM*
Ga0126379_1038321813300010366Tropical Forest SoilSAIPYHQEDPAIREEFVQALAREGVAGRMNPEFYERPPQEGEVVMGDVM*
Ga0126379_1219741013300010366Tropical Forest SoilIRTEFEAALAREGVASRMNPEFYQRPPAAGEVVMGDVM*
Ga0126381_10233780313300010376Tropical Forest SoilRTEFEAALAREGVASRMNPEFYQRPPAEGEVVMGDVM*
Ga0126381_10294877313300010376Tropical Forest SoilDPAIRTEFEAALAREGVASRMNPEFYQRPPAAGEVVMGDVM*
Ga0126383_1188203123300010398Tropical Forest SoilKEYEATLKREGVVSRMNPEFYERPPAEGEVVMGDVM*
Ga0126383_1210595313300010398Tropical Forest SoilAIRTEFEAALAREGVASRMNPEFYQRPPAAGEVVMGDVM*
Ga0134121_1120460413300010401Terrestrial SoilIEQALAKEGVATRMNAEFYERPPADGEVVMGDVM*
Ga0134123_1175715313300010403Terrestrial SoilIRQEFTEALKKEGVAGRMNPEFYERPPAEGEVVLGDVM*
Ga0150983_1587246833300011120Forest SoilQEFEATLTREGLPSRMNAEFYARPPNEGEVVMGDVM*
Ga0137388_1083581823300012189Vadose Zone SoilRAEFEQALKREGVASRMNPEFYQRPAAEGEVVMGDVM*
Ga0137388_1173423013300012189Vadose Zone SoilEFEEALKREGVASRMNAEFYQRPPAEGEVVMGDVM*
Ga0137383_1075836123300012199Vadose Zone SoilDPNIRKEFSEVLKKGGIASRMNPEFYERPPAGGEVVMGDVM*
Ga0137362_1080294123300012205Vadose Zone SoilAIPYHQEDPAIRTEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM*
Ga0137376_1120684013300012208Vadose Zone SoilEEFTATLAKEGVQNRMNPEFYERPPADGEDVMGDVM*
Ga0150985_11777319223300012212Avena Fatua RhizosphereFEETLAREGVKSRMNPEFYERPPAEGEAVMGDVM*
Ga0137360_1172820523300012361Vadose Zone SoilFEAALARQSVVSRMNPEFYQRPPAEGEVVMGDVM*
Ga0134043_128440713300012392Grasslands SoilAIRLEFDQTVAQEGVKSRMNPVFYERPPAAGEEVPADM*
Ga0153915_1295273823300012931Freshwater WetlandsAIPYHQEDPAIRKEFFEALAREGVPSRMNPEFYERPPGEGDEVMGDVM*
Ga0164300_1024959823300012951SoilDPAIRKEFEAALAREGVAGRMNPEFYQRPPAGGEVVMGDVM*
Ga0126369_1041998123300012971Tropical Forest SoilDPDIRKEFEAALAREGVASRMNPEFYQRPPAEGEVVMGDVM*
Ga0126369_1212267113300012971Tropical Forest SoilNEFIEALKREGIACRMNPEFYERPPAEGEVVMGDVM*
Ga0164305_1115458623300012989SoilYHQEDPAIRTEFEAALAREGVAGRMNQEFYQRPPAEGDVVMGDVM*
Ga0134079_1041723123300014166Grasslands SoilEFQEALAREGVASRMNKEFYERPPGEGEVVMGDVM*
Ga0181534_1079550313300014168BogEDPAIRAEFERRLKAEGVASRMNPDFYVGPPAEGAEVPGDAF*
Ga0181526_1010876613300014200BogQEFEAILKREGLSSRMNPEFYERPPSEGEVVMGDVM*
Ga0163163_1330933823300014325Switchgrass RhizosphereAIRREFEATLALEGVASRMNPAFYERPPADGEDVPPDM*
Ga0137412_1105851613300015242Vadose Zone SoilIPYHQEDPAIRQEFGEALKSEGVPSRMNPEFYQRPPGEGEDVMGDVM*
Ga0137409_1037850013300015245Vadose Zone SoilNAIPYHMEDPAIRLEFEQTVAQEGVKSRMNPVFYERPPTVGEEIPADM*
Ga0137409_1149049113300015245Vadose Zone SoilHQEDPAIRQEFEATLKREGLPSRMNPEFYARPPGEGDVVMGDVM*
Ga0137403_1096594523300015264Vadose Zone SoilIPYHQEDPAIRAEFQAALAREGVASRMNPEFYQRPPGEGEVVMGDVM*
Ga0182036_1169875313300016270SoilSAIRKEFEAALAPEGVASRMNPEFYQRPPAEGEEVMGDVM
Ga0182032_1088437023300016357SoilPYHQEDPAIRTEFEAALAREGVASRMNPEFYQRPPAEGEEVMGDVM
Ga0190266_1054522613300017965SoilPAIRKQFEERLAREGVTSRMNPEFYERPPADGEAVLGDVM
Ga0187784_1041269813300018062Tropical PeatlandQEDPAIRTEFEATLEREGLPSRMNPEFYERPPNEGEVVMGDVM
Ga0190265_1135021613300018422SoilHQEDPAIRAQFTERLAREGVKSRMNPEFYDRPPTEGEAVMGDVM
Ga0193696_106245513300020016SoilEFEEALKREGVASRMNLEFYQRPLAEGEAVMDDVM
Ga0210401_1064865013300020583SoilYHQEDPAIRQEFEATLKREGLPSRMNPEFYERPPGEGEVVMGDVM
Ga0213874_1023161123300021377Plant RootsDPAIREEFAQALAHEGVASRMNPEFYERPPGEGEEVMGDVM
Ga0210393_1090249313300021401SoilPAIRQEFAETLGREGVASRMNPEFYERPPGEGEEVMGDVM
Ga0210385_1033502233300021402SoilAIGYHQEDPAIRKEFEETLKREGLPSRMKPEFYERPPNEGEVVMGDVM
Ga0210385_1072681013300021402SoilEDPAIRKEFEETLKREGLPSRMNAEFYQRPPNEGEVVMGDVM
Ga0210394_1081706613300021420SoilYYQEDRAIRQEFEAILKREGLPSRMNPEFYERPPGDGEVVMGDVM
Ga0210394_1121860723300021420SoilRQEFEATLKREGLPSRMNPEFYERPPGDGEVVMGDVM
Ga0210410_1048391613300021479SoilSAIPYHQEDPAIRQEFSETLAREGVASRMNPEFYERPPGAGEEVMGDVM
Ga0179591_107602343300024347Vadose Zone SoilYHQEDPYIREEFTEALKREGIDCRMNPEFYERPPAEGEVVMGDVM
Ga0208850_107881323300025457Arctic Peat SoilEFEAILKREGLPSRMNPEFYERPPSEGEVVMGDVM
Ga0209483_116650323300025862Arctic Peat SoilHQEDPAIRAEFDATLKREGLESRMKPEFYERPPAEGDVVMGDVM
Ga0207687_1180405913300025927Miscanthus RhizospherePYHQEDPAIRKEFEATLAREGVKSRMNPEFYERPPAEGEAVMGDVM
Ga0207664_1152655323300025929Agricultural SoilIPYHQEDPAIRREFSEALAREGVASRMNPEFYERPPGEGEEVMGDVM
Ga0207670_1068620913300025936Switchgrass RhizosphereQEDPYIRQEFTEALSREGVACRMNPEFYERPPAEGEVVMGDVM
Ga0207678_1039988823300026067Corn RhizosphereIRQEFTEALSREGVACRMNPEFYERPPAEGEVVMGDVM
Ga0207641_1196614323300026088Switchgrass RhizosphereIPYHQEDPYIRQEFTEALSREGVACRMNPEFYERPPAEGEVVMGDVM
Ga0208990_108915533300027663Forest SoilEDPYIRQEFTEVLKTESIACRMNPEFYERPPADGEDVMGDVM
Ga0209588_117999623300027671Vadose Zone SoilEDPAIRTEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM
Ga0209689_115603023300027748SoilEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM
Ga0209590_1026710313300027882Vadose Zone SoilQEDPAIRKEFEEALKREGVASRMNAEFYQRPPAEGEVVMGDVM
Ga0209624_1085070413300027895Forest SoilEDPAIRREFEAILKREGLPSRMNPEFYERPPSEGEVVMGDVM
Ga0209488_1006721723300027903Vadose Zone SoilIPYHQEDPAIRKEFGETLAREGIAGRMNPEFYQRPPGEGEDVLGDVM
Ga0209488_1020001813300027903Vadose Zone SoilYHMEDPAIRQEFEATLALQGVASRMNPAFYERPPADGEEVPADM
Ga0209853_114883523300027961Groundwater SandIRKEFTEALNREGVGCRMNPEFYERPPAEGEVVMGDVM
Ga0307320_1006195423300028771SoilEFEEALKREGVASRMNRKFYQRPPAEGEAVMGDVM
Ga0307290_1002378813300028791SoilEDPAVRKEFEEALKREGVASRMNREFYQRPPAEGEAVMGDVM
Ga0307287_1006075323300028796SoilHQEDPAVRKEFEEALKREGVASRMNLEFYQRPLAEGEAVMDDVM
Ga0307308_1040454433300028884SoilYHQEDPAVRKEFEEALKREGVASRMNREFYQRPPAEGEAVMDDVM
Ga0308309_1082130513300028906SoilQEDPAIRQEFSETLAREGVASRMNPEFYERPPGAGEEVMGDVM
Ga0308178_107817123300030990SoilDPAVRKEFEEALKREGVASRMNLEFYQRPLAEGEAVMDDVM
Ga0307500_1007662613300031198SoilKEFTEALKREGIDCRMNPEFYERPPAEGEEVMGDVM
Ga0310886_1106140723300031562SoilDPAIRAEFDATLRKEGVASRMNPAFYERPPADGEDVPPDM
Ga0318515_1028574913300031572SoilTEFEAALAREGVASRMNPEFYQRPPAAGEVVMGDVM
Ga0310915_1025506413300031573SoilAIRREFEAALEREGVASRMNPEFYQRPPAEGEVVMGDVM
Ga0318542_1036492313300031668SoilTEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM
Ga0310686_10863762113300031708SoilHQEDPAIRKEFEATLAGEGLPSRMKPEFYQRPPTEGEVVMGDVM
Ga0318500_1026662923300031724SoilAIPYHQEDPAIRREFEAALEREGVASRMNPEFYQRPPAEGEVVMGDVM
Ga0318501_1054003423300031736SoilAIPYHQEDPAIRTEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM
Ga0318494_1053035423300031751SoilIPYHQEDPAIRKEFEAALKREGVASRMNLEFYERPPAEGEVVMGDVM
Ga0318526_1038058513300031769SoilAIRTEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM
Ga0318546_1054202023300031771SoilIPYHQEDPAIREEFGQALAHEGVASRMNAEFYERPPQEGEVVMGDVM
Ga0318508_121114223300031780SoilRKEFEAALAREGVASRMNAEFYQRPPAAGEMVMGDVM
Ga0318547_1008070033300031781SoilEFEAALAREGVASRMNAEFYQRPPAAGEMVMGDVM
Ga0318550_1014875413300031797SoilGYHQEDAAIRKEFEATLAREGLASRMKPEFYERPPNEGEVVMGDVM
Ga0318499_1014774213300031832SoilSAIPYHQEDPSIRAEFVQALAHEGVASRMNAEFYERPPQEGEVVMGDVM
Ga0306925_1168581213300031890SoilIPYHQEDPAIRAEFGEALAHEGVASRMNAEFYERPPQEGEVVMGDVM
Ga0318536_1000979243300031893SoilHQEDPAIRREFEAALEREGVASRMNPEFYQRPPAEGEVVMGDVM
Ga0318536_1070015623300031893SoilAIRTEFEAALAREGVASRMNPEFYQRPPAAGEVVMGDVM
Ga0318522_1001895133300031894SoilIRKEFEAALAREGVASRMNPEFYQRPPAEGEVVMGDVM
Ga0318551_1090015423300031896SoilPAIRTEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM
Ga0306921_1183280513300031912SoilAIRAEFVQALAHEGVASRMNAEFYERPPQEGEVVMGDVM
Ga0310913_1028876813300031945SoilEFVQALAHEGVASRMNAEFYERPPQEGEVVMGDVM
Ga0306926_1131886413300031954SoilHQEDPYIRKEFSETLNKEGLQNRMNAEFYERPPAEGEMVMGDVM
Ga0318531_1056247513300031981SoilRKEFAETLGREGVSSRMNPEFYERPPAEGEVVMGDVM
Ga0310906_1052329023300032013SoilNAIPYHMEDPAIRAEFDATLRKEGVASRMNPAFYERPPADGEDVPPDM
Ga0318556_1051215523300032043SoilDPAIRTEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM
Ga0318505_1060835813300032060SoilSAIGYHQEDAAIRKEFEATLAREGLASRMKPEFYERPPNEGEVVMGDVM
Ga0318553_1069918023300032068SoilHQEDPAIRTEFEAALAREGVAGRMNPEFYQRPPAEGEVVMGDVM
Ga0311301_1178256913300032160Peatlands SoilQDDPAIRQEFEAILKREGLPSRMNPEFYERPPSEGEVVMGDVM
Ga0335081_1065467933300032892SoilIGYHQEDPAIRKEFEATLKREGLPSRMNPEFYERPPAEGEVVMGDVM
Ga0370541_030270_521_6493300034680SoilEDPYIREEFTEALKREGIDCRMNPEFYERPPAEGEVVMGDVM


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.