Metagenome / Metatranscriptome Family F064917

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064917
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	50 residues
Representative Sequence	LDTQKKSFWLLFTLLSLGAFFLPFWWGVAETFAALFVSWWVIYRSGIY
Number of Associated Samples	97
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.38 %
% of genes near scaffold ends (potentially truncated)	16.41 %
% of genes from short scaffolds (< 2000 bps)	67.97 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.969 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (20.312 % of family members)
Environment Ontology (ENVO)	Unclassified (32.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.89% β-sheet: 0.00% Coil/Unstructured: 42.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF13489	Methyltransf_23	7.81
PF00133	tRNA-synt_1	7.03
PF01638	HxlR	7.03
PF10263	SprT-like	4.69
PF12710	HAD	4.69
PF07589	PEP-CTERM	3.12
PF13649	Methyltransf_25	3.12
PF13847	Methyltransf_31	2.34
PF00903	Glyoxalase	2.34
PF01546	Peptidase_M20	2.34
PF08704	GCD14	1.56
PF16363	GDP_Man_Dehyd	1.56
PF00691	OmpA	1.56
PF12681	Glyoxalase_2	1.56
PF00072	Response_reg	0.78
PF07228	SpoIIE	0.78
PF01243	Putative_PNPOx	0.78
PF11138	DUF2911	0.78
PF04134	DCC1-like	0.78
PF01850	PIN	0.78
PF03548	LolA	0.78
PF03023	MurJ	0.78
PF02776	TPP_enzyme_N	0.78
PF13456	RVT_3	0.78
PF01053	Cys_Met_Meta_PP	0.78
PF06230	LpxI_C	0.78
PF12801	Fer4_5	0.78
PF03783	CsgG	0.78
PF02230	Abhydrolase_2	0.78
PF13690	CheX	0.78
PF05345	He_PIG	0.78
PF01134	GIDA	0.78
PF02894	GFO_IDH_MocA_C	0.78
PF13237	Fer4_10	0.78
PF12698	ABC2_membrane_3	0.78
PF04237	YjbR	0.78
PF08245	Mur_ligase_M	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	7.03
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	7.03
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	7.03
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	7.03
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	7.03
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	1.56
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.78
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.78
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.78
COG2834	Outer membrane lipoprotein-sorting protein	Cell wall/membrane/envelope biogenesis [M]	0.78
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.78
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.78
COG3494	Uncharacterized conserved protein, DUF1009 family	Function unknown [S]	0.78
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.78
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.78
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.78
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.78
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.78
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	0.78
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.78
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.78
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1462	Curli biogenesis system outer membrane secretion channel CsgG	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.97 %
Unclassified	root	N/A	32.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.97 %
Unclassified	root	N/A	32.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.97 %
Unclassified	root	N/A	32.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.12 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	17.19 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.25 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	15.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.25 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.78 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.84 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.25 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.25 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.78 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.78 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.78 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.25 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.47 %
Vibrio ruber	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio ruber	0.78 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.78 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.78 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.25 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.47 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.78 %
Vibrio ruber DSM 16370	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio ruber → Vibrio ruber DSM 16370	0.78 %
Chondromyces	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces	0.78 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.25 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.47 %
Chondromyces apiculatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus	0.78 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.78 %
Vibrio ruber DSM 16370	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio ruber → Vibrio ruber DSM 16370	0.78 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.03 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.25 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.47 %
Chondromyces apiculatus DSM 436	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus → Chondromyces apiculatus DSM 436	0.78 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.78 %
Vibrio ruber DSM 16370	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio ruber → Vibrio ruber DSM 16370	0.78 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZTSFBX01A9USI	Not Available	520	Open in IMG/M
3300001385\|JGI20193J14888_1023823	Not Available	941	Open in IMG/M
3300003368\|JGI26340J50214_10151178	Not Available	581	Open in IMG/M
3300003369\|JGI24140J50213_10008359	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3997	Open in IMG/M
3300004080\|Ga0062385_10700464	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300004092\|Ga0062389_100068690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2957	Open in IMG/M
3300004152\|Ga0062386_100249817	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300004152\|Ga0062386_100467050	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005439\|Ga0070711_100309428	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300005529\|Ga0070741_10056883	All Organisms → cellular organisms → Bacteria	4621	Open in IMG/M
3300005533\|Ga0070734_10019902	All Organisms → cellular organisms → Bacteria	4465	Open in IMG/M
3300005541\|Ga0070733_10297704	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300005591\|Ga0070761_10279601	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300005938\|Ga0066795_10082007	Not Available	957	Open in IMG/M
3300006052\|Ga0075029_100781341	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300006055\|Ga0097691_1011745	All Organisms → cellular organisms → Bacteria	4271	Open in IMG/M
3300006176\|Ga0070765_100501765	Not Available	1140	Open in IMG/M
3300006176\|Ga0070765_100721964	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300006642\|Ga0075521_10022737	All Organisms → cellular organisms → Bacteria	2569	Open in IMG/M
3300006642\|Ga0075521_10226209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio ruber → Vibrio ruber DSM 16370	891	Open in IMG/M
3300006864\|Ga0066797_1113928	Not Available	946	Open in IMG/M
3300006893\|Ga0073928_11234239	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300008786\|Ga0103639_1005971	Not Available	573	Open in IMG/M
3300009552\|Ga0116138_1067072	Not Available	1011	Open in IMG/M
3300009623\|Ga0116133_1047743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300009634\|Ga0116124_1213043	Not Available	537	Open in IMG/M
3300009672\|Ga0116215_1225329	Not Available	823	Open in IMG/M
3300009700\|Ga0116217_10830615	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300009764\|Ga0116134_1035306	Not Available	1963	Open in IMG/M
3300010048\|Ga0126373_10445965	Not Available	1328	Open in IMG/M
3300010048\|Ga0126373_10940925	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300010341\|Ga0074045_10312769	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300010361\|Ga0126378_11887093	Not Available	680	Open in IMG/M
3300010376\|Ga0126381_100999766	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300010376\|Ga0126381_101186312	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300010379\|Ga0136449_102001805	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300012987\|Ga0164307_11296637	Not Available	608	Open in IMG/M
3300014155\|Ga0181524_10067482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	2151	Open in IMG/M
3300014156\|Ga0181518_10006222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10037	Open in IMG/M
3300014164\|Ga0181532_10000006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	311775	Open in IMG/M
3300014164\|Ga0181532_10028993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3871	Open in IMG/M
3300014165\|Ga0181523_10240605	Not Available	1036	Open in IMG/M
3300014199\|Ga0181535_10040947	Not Available	3292	Open in IMG/M
3300014495\|Ga0182015_10200435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Chondromyces → Chondromyces apiculatus → Chondromyces apiculatus DSM 436	1334	Open in IMG/M
3300014838\|Ga0182030_11628435	Not Available	527	Open in IMG/M
3300015206\|Ga0167644_1034344	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300015206\|Ga0167644_1066573	Not Available	1202	Open in IMG/M
3300015206\|Ga0167644_1104373	Not Available	832	Open in IMG/M
3300016702\|Ga0181511_1456724	All Organisms → cellular organisms → Bacteria	2742	Open in IMG/M
3300016702\|Ga0181511_1461295	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300016750\|Ga0181505_10696295	All Organisms → cellular organisms → Bacteria	5752	Open in IMG/M
3300017932\|Ga0187814_10159095	Not Available	843	Open in IMG/M
3300017935\|Ga0187848_10078111	Not Available	1538	Open in IMG/M
3300017938\|Ga0187854_10098975	Not Available	1370	Open in IMG/M
3300017941\|Ga0187850_10162078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1043	Open in IMG/M
3300017942\|Ga0187808_10468266	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300017946\|Ga0187879_10027257	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3483	Open in IMG/M
3300017973\|Ga0187780_10378293	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300018006\|Ga0187804_10506648	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300018025\|Ga0187885_10021564	Not Available	3669	Open in IMG/M
3300018026\|Ga0187857_10016262	Not Available	4325	Open in IMG/M
3300018030\|Ga0187869_10193951	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300018038\|Ga0187855_10586540	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300018042\|Ga0187871_10409260	Not Available	749	Open in IMG/M
3300021171\|Ga0210405_10242099	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300021402\|Ga0210385_10319076	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300021404\|Ga0210389_10752558	Not Available	762	Open in IMG/M
3300021405\|Ga0210387_10083873	All Organisms → cellular organisms → Bacteria	2636	Open in IMG/M
3300021407\|Ga0210383_10055004	All Organisms → cellular organisms → Bacteria	3318	Open in IMG/M
3300021433\|Ga0210391_10672955	Not Available	811	Open in IMG/M
3300021477\|Ga0210398_10004292	All Organisms → cellular organisms → Bacteria	13409	Open in IMG/M
3300021477\|Ga0210398_10064744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2981	Open in IMG/M
3300021560\|Ga0126371_12918874	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300024295\|Ga0224556_1022828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1584	Open in IMG/M
3300025473\|Ga0208190_1008364	Not Available	2677	Open in IMG/M
3300025481\|Ga0208079_1001285	All Organisms → cellular organisms → Bacteria	13233	Open in IMG/M
3300025482\|Ga0208715_1003966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3230	Open in IMG/M
3300025527\|Ga0208714_1011261	All Organisms → cellular organisms → Bacteria → Acidobacteria	2304	Open in IMG/M
3300025527\|Ga0208714_1055797	Not Available	846	Open in IMG/M
3300025553\|Ga0208080_1013947	All Organisms → cellular organisms → Bacteria	2970	Open in IMG/M
3300025579\|Ga0207927_1041261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300025579\|Ga0207927_1080002	Not Available	773	Open in IMG/M
3300025916\|Ga0207663_10332582	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300026271\|Ga0209880_1053327	Not Available	880	Open in IMG/M
3300027042\|Ga0207766_1018466	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300027394\|Ga0209904_1003029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1283	Open in IMG/M
3300027703\|Ga0207862_1066987	Not Available	1080	Open in IMG/M
3300027812\|Ga0209656_10012352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5361	Open in IMG/M
3300027812\|Ga0209656_10040126	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2712	Open in IMG/M
3300027812\|Ga0209656_10524824	Not Available	515	Open in IMG/M
3300027826\|Ga0209060_10241890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300027854\|Ga0209517_10683615	Not Available	531	Open in IMG/M
3300028015\|Ga0265353_1004090	Not Available	1175	Open in IMG/M
3300028798\|Ga0302222_10146024	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300029951\|Ga0311371_11324731	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300031234\|Ga0302325_10036639	All Organisms → cellular organisms → Bacteria	9997	Open in IMG/M
3300031236\|Ga0302324_101857677	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300031525\|Ga0302326_10450202	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300031708\|Ga0310686_116225311	Not Available	1639	Open in IMG/M
3300031708\|Ga0310686_119148127	Not Available	509	Open in IMG/M
3300032001\|Ga0306922_11423957	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300032770\|Ga0335085_10000553	All Organisms → cellular organisms → Bacteria	102371	Open in IMG/M
3300032770\|Ga0335085_10047806	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5810	Open in IMG/M
3300032770\|Ga0335085_12416031	Not Available	523	Open in IMG/M
3300032783\|Ga0335079_10000156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	78689	Open in IMG/M
3300032783\|Ga0335079_10147192	All Organisms → cellular organisms → Bacteria	2645	Open in IMG/M
3300032783\|Ga0335079_11171045	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300032783\|Ga0335079_11409714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300032783\|Ga0335079_11841101	Not Available	588	Open in IMG/M
3300032805\|Ga0335078_10091490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4410	Open in IMG/M
3300032805\|Ga0335078_10142677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3400	Open in IMG/M
3300032805\|Ga0335078_10216163	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2646	Open in IMG/M
3300032805\|Ga0335078_11064861	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300032805\|Ga0335078_11630498	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300032828\|Ga0335080_10752351	Not Available	1011	Open in IMG/M
3300032829\|Ga0335070_11815539	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300032892\|Ga0335081_10165576	All Organisms → cellular organisms → Bacteria	3129	Open in IMG/M
3300032892\|Ga0335081_11876118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	645	Open in IMG/M
3300032895\|Ga0335074_10001178	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	35642	Open in IMG/M
3300032895\|Ga0335074_10028625	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7825	Open in IMG/M
3300033004\|Ga0335084_10896206	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300033134\|Ga0335073_10001325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33000	Open in IMG/M
3300033134\|Ga0335073_12142657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	504	Open in IMG/M
3300033158\|Ga0335077_10005938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	15030	Open in IMG/M
3300033158\|Ga0335077_10344469	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1617	Open in IMG/M
3300033158\|Ga0335077_11499353	Not Available	646	Open in IMG/M
3300033158\|Ga0335077_11906585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300033402\|Ga0326728_10000018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	689602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.88%
Aquatic	Environmental → Aquatic	28.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.41%
Freshwater	Environmental → Aquatic → Freshwater	26.56%
Peat	Environmental → Terrestrial → Peat	5.47%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.78%
Sediment	Environmental → Aquatic → Sediment	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	27.34%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	26.56%
Loam	Environmental → Terrestrial → Soil → Loam	5.47%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.47%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	22.66%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.19%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	9.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.03%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.34%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	20.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.38%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	9.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.91%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.12%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.12%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.34%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Wetland Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300008786	Microbial communities from wetland soil in Czech Republic - M3_cDNA	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025482	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025553	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027394	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 712P3D	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_02398580	2170459024	Grass Soil	MDSQKKSFWLLFTILSLGAFFFPFWWGVVETFAALFASWWIIYRSGIF
JGI20193J14888_10238232	3300001385	Arctic Peat Soil	LLNDQKKSFWLLFTLLGLGAFFLPVAWGVAETLAALFVSWWVIYRSGIY*
JGI26340J50214_101511781	3300003368	Bog Forest Soil	AKACLETGKKSMDSDASTQRKCFWLLLTLLSLAAIVLPFGWGVAETLLSVVVSWWVVYRSGIF*
JGI24140J50213_100083593	3300003369	Arctic Peat Soil	LNDQKKSFWLLFTLLGLGAFFLPLAWGVAETVAALFVSWWVIYRSGIY*
Ga0062385_107004643	3300004080	Bog Forest Soil	MDSDSGVQRKCFWLLLTLLSVGAFFLPLGWGVVETLVSAVVSWWVVYRSGIL*
Ga0062389_1000686905	3300004092	Bog Forest Soil	MDSDASTQRKCFWLLLTLLSLAAIVLPFGWGVAETLLSVVVSWWVVYRSGIF*
Ga0062386_1002498172	3300004152	Bog Forest Soil	LGSQKKAFWLLFGVLSCGAFFLSIGWGVVETFASLFVSWWVIYRSGIY*
Ga0062386_1004670502	3300004152	Bog Forest Soil	VDSDSGTQRKCFWLLLTVLSLGAIFLPLGWGVVETLASVIISWWVVYRSGIF*
Ga0070711_1003094282	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LESQKKTFWLLFTLLSLGALFLPFWWGVGESFAAVFVSWWVVYRSGIF*
Ga0070741_100568835	3300005529	Surface Soil	LNTQKKSFWLLFTLLSFGAFFLPLGWGIAETFAALVVSWWIVYRTGIF*
Ga0070734_100199022	3300005533	Surface Soil	LDTQKKSFWILFTLLGCGAFFLPLGWGVAETFAALFVSWWIIYRTGLF*
Ga0070733_102977042	3300005541	Surface Soil	LDSQKKSFWLLFTLLGCGAFFLPFWWGVVETFASLFVSWWIIYRTGLY*
Ga0070761_102796012	3300005591	Soil	LNRVCNYTGLVNIARRPLLDSQKKSFWLLFTLLSLGAFFLPFWWGVGETFAAVVASWWVIYRSGIF*
Ga0066795_100820072	3300005938	Soil	LDDQKKSFWLLFTLLGLGAFFLPLWWAVAETVAALIVSWWVIYRSGIY*
Ga0075029_1007813412	3300006052	Watersheds	MDSDSGTQRKCFWVLLTLLSLGAYFLPLGWGVVETLVSALVSWWVVYRSGIF*
Ga0097691_10117454	3300006055	Arctic Peat Soil	LLNDQKKSFWLLFTLLGLGAFFLPVAWGVAETLAALFGSWWVIYRSGIY*
Ga0070765_1005017651	3300006176	Soil	MPARLLDFLALDTQRKSFWLLFTLLSFGAFFLPLWWGVVETFAALVASWWIIYRSGIY*
Ga0070765_1007219642	3300006176	Soil	LNNQKKSFWLLFTLLSLGAFFLPLAWGVVETLAALVVSWWVIYRSGIY*
Ga0075521_100227373	3300006642	Arctic Peat Soil	LDDQKKSFWLLFTLLGLGAFFLPLWWPVAETVAALIVSWWVIYRSGIY*
Ga0075521_102262091	3300006642	Arctic Peat Soil	LNDQKKSFWLLFTLLGLGAFFLPLAWGVAETLAALFVSWWVIYRSGIY*
Ga0066797_11139282	3300006864	Soil	LDDQKKSFWLLFTLLGLGAFFLPLWCAVAETVAALIVSWWVIYRSGIY*
Ga0073928_112342392	3300006893	Iron-Sulfur Acid Spring	LIRPACQRLPPLRLIGLDAQKKSFWLLFTLLGCGAFFLPFAWGVAETFASLFVSWWVIYRSGLF*
Ga0103639_10059711	3300008786	Wetland Soil	MDSDSGTQRKCFWVLLTLLSLGAYFLPLGWGVVETLVSVAVSWWVVYRSGIF*
Ga0116138_10670721	3300009552	Peatland	LGSQRKSFWLLFTLLSVGAFFLPLWWGVAETFAALLVSWWVIYRSGIY*
Ga0116133_10477432	3300009623	Peatland	VTELGSQRQSFWLLFTLLSLGAFFLPLWWGVAETFAALVVSWWVIYRSGIY*
Ga0116124_12130431	3300009634	Peatland	LGSQRKSFWLLFTLLSVGAFFLPLWWGVAETFAALVVSWWVIYRSGIY*
Ga0116215_12253292	3300009672	Peatlands Soil	YAIVDRERASDLGSQRKSFWLLFTLLSLGAFFLPLWWGVAETFASLVVSWWVIYRSGIY*
Ga0116217_108306152	3300009700	Peatlands Soil	LGSQRKSFWLLFTLLSLGAFFLPLWWGVAETFASLVVSWWVIYRSGIY*
Ga0116134_10353062	3300009764	Peatland	LGSQRQSFWLLFTPLSVGAFFLPLWWGVAETFAALLVSWWVIYRSGIY*
Ga0126373_104459652	3300010048	Tropical Forest Soil	VDSQKKSFWLLFAVLSCIGFFLPFWWGVAESFGALFVSWWVIYRSGIF*
Ga0126373_109409251	3300010048	Tropical Forest Soil	LDSQKKSFWLLFGLLSCGAFFLSFGWGIAETFAALFVSWWV
Ga0074045_103127692	3300010341	Bog Forest Soil	MDSDPGMQRKSFWLLFTLLSVGAFFLPLGWGVVETLVSAVASWWVVYRSGIF*
Ga0126378_118870932	3300010361	Tropical Forest Soil	LDDQKKSFWLLFALLGLGAFFLPLGWGIAETFGALFVSWWVIYRSGIF*
Ga0126381_1009997662	3300010376	Tropical Forest Soil	LILDSQRKSFWLLFTLLSLGAFFLPFWWGVTETFAAAIASWWLIYCSGLF*
Ga0126381_1011863121	3300010376	Tropical Forest Soil	LDSQKKSFWLLFGLLSCGAFFLSFGWGIAETFAALFVSWWVVYRSGVF*
Ga0136449_1020018052	3300010379	Peatlands Soil	LIRRPDRLILNDQKKSFWLLFALLGLGAFFLPLAWGVAETFAALFVSWWVIYRSGIY*
Ga0164307_112966371	3300012987	Soil	QKKTFWLLFTLLSLGALFLPFWWGVGESFAAVFVSWWVVYRSGIF*
Ga0181524_100674821	3300014155	Bog	LDSQRKSFWLLFTLLSLGAFFLPFWWGVGETFASLVVSWWVIYRSGIY*
Ga0181518_100062226	3300014156	Bog	LNSQRKSFWLVFALLSVGAFFLPLWWGVAETFAALFVSWWVIYKSGIY*
Ga0181532_10000006141	3300014164	Bog	LDSQKKSFWLLFGVLSCGAFFLSLGWGVVETFASLFVSWWVIYRSGIF*
Ga0181532_100289932	3300014164	Bog	LDTQKKSFWLLFTLLSVGAFFLPFWWGVAETFVALFVSWWVIYRSGIY*
Ga0181523_102406052	3300014165	Bog	LNSQRKSFWLLFSLLSCGAFFLPLWWGVGETFVALVVSWWVIYRSGIF*
Ga0181535_100409475	3300014199	Bog	VTELGSQRQSFWLLFTLLSLGAFFLPLWWGVAETFAALVVSWW
Ga0182015_102004353	3300014495	Palsa	LDTQKKSFWLLFTLLSLGAFFLPFWWGVAETFAALFVSWWVIYRSGIY*
Ga0182030_116284351	3300014838	Bog	SATVLYAIIDRERVTELGSQRQSFWLLFTLLSLGAFFLPLWWGVAETFAALLVSWWVIYRSGIY*
Ga0167644_10343442	3300015206	Glacier Forefield Soil	LDSQKKSFWLLFTILSLGAFFFSFWWGVAETFAALFASWWIIYRSGIF*
Ga0167644_10665731	3300015206	Glacier Forefield Soil	MDSQKKSFWLLFTLLGLGAFFLPFWWGVAETFGALFASWWIIYRSGIF*
Ga0167644_11043731	3300015206	Glacier Forefield Soil	LDTQKKSFWLLFTLLSFGAFFLPLWWGVAETFAAVFVSWWVIY
Ga0181511_14567241	3300016702	Peatland	VKRRVVLYAIVDRERVCDLDSQRKSFWLLFTLLSLGAFFLPFWWGVGETFASLVVSWWVIYRSGIY
Ga0181511_14612952	3300016702	Peatland	LDSQKKSFWLLFGVLSCGAFFLSLGWGVVETFASLFVSWWVIYRSGIF
Ga0181505_106962951	3300016750	Peatland	LDSQRKSFWLLFTLLSLGAFFLPFWWGVGETFASLVVSWWVIYRSGIY
Ga0187814_101590952	3300017932	Freshwater Sediment	MDSDTSTQRKCFWLLLTLLSLGAIFLPFGWGVVETLASIVISWWVVH
Ga0187848_100781112	3300017935	Peatland	LGSQRKSFWLLFTLLSVGAFFLPLWWGVAETFAALLVSWWVIYRSGIY
Ga0187854_100989752	3300017938	Peatland	LGSQRQSFWLLFTLLSVGAFFLPLWWGVAETFAALLVSWWVIYRSGIY
Ga0187850_101620782	3300017941	Peatland	VTELGSQRQSFWLLFTLLSLGAFFLPLWWGVAETFAALVVSWWVIYRSGIY
Ga0187808_104682662	3300017942	Freshwater Sediment	MDSNAGVQRKCFWLLLTLLSVGAFFLPLVWGVVETLVSAAVSWWIV
Ga0187879_100272573	3300017946	Peatland	LDSQKKSFWLLFTILSLGAFFLPIWWGIAETFAALFASWWIIYRSGIF
Ga0187780_103782932	3300017973	Tropical Peatland	MLDSQKKSFWLLFALLGCGAFFLPLGWGIAATFTALFVSWWVIYRSGMF
Ga0187804_105066481	3300018006	Freshwater Sediment	MDSNAGVQRKCFWLLLTLLSVGAFFLPLVWGVVETLVSAAVSWWIVYRSGIL
Ga0187885_100215642	3300018025	Peatland	VLCAIVHRERASELGSQRKSFWLLFTLLSVGAFFLPLWWGVAETFAALLVSWWVIYRSGI
Ga0187857_100162622	3300018026	Peatland	VTELGSQRQSFWLLFTLLSLGAFFLPLWWGVAETFAALLVSWWVIYRSGIY
Ga0187869_101939511	3300018030	Peatland	VSGLDSQRKSFWLLFALLSLGAFFLPWWWGVAETFAALFVSWWVIYKSGIY
Ga0187855_105865402	3300018038	Peatland	VHEGLYLDSQKKSFWLLFTILSLGAFFLPIWWGIAETFAALFASWWIIYRSGIF
Ga0187871_104092602	3300018042	Peatland	LECVRTIRDVGRERVGDLGSQRQSFWLLFTLLSLGAFFLPLWWGVVETFAALVVSWWVIYRSGIY
Ga0210405_102420994	3300021171	Soil	GDYRLLDSQKKSFWLLFTLLSLGAFFLPFWWGVGETFAAVFLSWWVIYRSGLF
Ga0210385_103190762	3300021402	Soil	LNRVCNYTGLVNIARRPLLDSQKKSFWLLFTLLSLGAFFLPFWWGVGETFAAVVASWWVIYRSGIF
Ga0210389_107525581	3300021404	Soil	MDSQKKSFWLLFTLLGLGAFFLPFWWGVAETFGALFASWWIIYRSGIF
Ga0210387_100838734	3300021405	Soil	LDSQKKSFWLLFTILSLGAFFFSFWWGVAETFAALFASWWVIYRSGIF
Ga0210383_100550046	3300021407	Soil	LDSQKKSFWLLFTLLSLGAFWLPFWWGVAETFAALFASWWVIYRSGIF
Ga0210391_106729552	3300021433	Soil	LNNQKKSFWLLFTLLSLGAFFLPLAWGVVETLAALVVSWWVIYRSGIY
Ga0210398_1000429212	3300021477	Soil	LDTQKKSFWLLFTLLSLGAFFLPLGWGIAETFAALFLSWWVIYRSGIY
Ga0210398_100647445	3300021477	Soil	LNRVCNYTGLVNIARRPLLDSQKKSFWLLFTLLSLGAFFLPFWWGVGETLAAVVASWWVIYRSGIF
Ga0126371_129188741	3300021560	Tropical Forest Soil	VDSQKKSFWLLFAVLSCIGFFLPFWWGVAESFGALFVS
Ga0224556_10228283	3300024295	Soil	LGSQRQSFWLLFTLLSFGAFFLPLWWGVGETFASLVVSWWVIYRSGIY
Ga0208190_10083642	3300025473	Peatland	RSASVLCAIVHRERASELGSQRKSFWLLFTLLSVGAFFLPLWWGVAETFAALLVSWWVIYRSGIY
Ga0208079_100128514	3300025481	Arctic Peat Soil	LLNDQKKSFWLLFTLLGLGAFFLPVAWGVAETLAALFVSWWVIYRSGIY
Ga0208715_10039662	3300025482	Arctic Peat Soil	LNDQKKSFWLLFTLLGLGAFFLPLAWGVAETVAALFVSWWVIYRSGIY
Ga0208714_10112612	3300025527	Arctic Peat Soil	LTDQKKSFWLLFTLLGLGAFFLPLAWGVAETLAALFVSWWVIYRSGIY
Ga0208714_10557971	3300025527	Arctic Peat Soil	LNDQKKSFWLLFTLLGLGAFFLPLAWGVAETLAALFVSWWVIYRSGIY
Ga0208080_10139471	3300025553	Arctic Peat Soil	LNDQKKSFWLLFTLLGLGAFFLPVAWGVAETLAALFVSWWVIYRSGIY
Ga0207927_10412612	3300025579	Arctic Peat Soil	LDHQKKSFWLLFTLLGLGAFFLPLWWAVAETVAALIVSWWVIYRSGIY
Ga0207927_10800022	3300025579	Arctic Peat Soil	LNDQKKSFWLLFTLLGLGAFFLPVAWGVAETVAALFVSWWVIYRSGIY
Ga0207663_103325822	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LESQKKTFWLLFTLLSLGALFLPFWWGVGESFAAVFVSWWVVYRSGIF
Ga0209880_10533272	3300026271	Soil	LDDQKKSFWLLFTLLGLGAFFLPLWWAVAETVAALIVSWWVIYRSGIY
Ga0207766_10184661	3300027042	Tropical Forest Soil	VDSDSSTQRKCFWLLLTILSVGAVFLPFGWGVVETIAAVIISWWVVYRSGIF
Ga0209904_10030292	3300027394	Thawing Permafrost	LDDQKKSFWLLFTLLGLGAFFLPLWWAVAETVAALIVSWWVIYRSGVY
Ga0207862_10669872	3300027703	Tropical Forest Soil	WLLLTILSVGAVFLPFGWGVVETIAAVIISWWVVYRSGIF
Ga0209656_100123527	3300027812	Bog Forest Soil	VDSDSGTQRKCFWLLLTVLSLGAIFLPLGWGVVETLASVIISWWVVYRSGIF
Ga0209656_100401265	3300027812	Bog Forest Soil	MDSDASTQRKCFWLLLTLLSLAAIVLPFGWGVAETLLSVVVSWWVVYRSGIF
Ga0209656_105248241	3300027812	Bog Forest Soil	LGSQKKAFWLLFGVLSCGAFFLSIGWGVVETFASLFVSWWVIYRSGIY
Ga0209060_102418901	3300027826	Surface Soil	LDTQKKSFWILFTLLGCGAFFLPLGWGVAETFAALFVSWWIIYRTGLF
Ga0209517_106836152	3300027854	Peatlands Soil	LGSQRKSFWLLFTLLSLGAFFLPLWWGVAETFASLVVSWWVIYRSGIY
Ga0265353_10040901	3300028015	Soil	AIVHRERASELGSQRKSFWLLFTLLSVGAFFLPLWWGVAETFAALLVSWWVIYRSGIY
Ga0302222_101460241	3300028798	Palsa	MGRERVFELGSQRKSFWLLFTLLSFGAFFLPLWWGVGETFAALVVSWWIIYRSGIY
Ga0311371_113247311	3300029951	Palsa	VIIGRERVFELGSQRKSFWLLFTLLSFGAFFLPLWWGVGETFAALVVSWWIIY
Ga0302325_100366393	3300031234	Palsa	LGSQRKSFWLLFTLLSLGAFFLPLWWGVGETFAALVVSWWVIYRSGIY
Ga0302324_1018576772	3300031236	Palsa	VDSQKKSFWLLFTILSLGAFFVPFWWGVAETFAALFASWWIIYRTGIF
Ga0302326_104502021	3300031525	Palsa	MGRERVFELGSQRKSFLLLFTLLSFGAFFLPLWWGVGETFAALVVSW
Ga0310686_1162253113	3300031708	Soil	LDTQKKSFWLLFTLLSLGAFFLPLGWGIAETFAALFVSWWVIYRSGIY
Ga0310686_1191481272	3300031708	Soil	MTPAVRLHPLDTQRKSFWLLFTLLSCGAFFLPLGWGVAETFAALFVSWWVIYR
Ga0306922_114239571	3300032001	Soil	LDDQKKSFWLLFALLGLGAFFLPLGWGIVETFAALFVSWWIIYRSGIF
Ga0335085_1000055335	3300032770	Soil	LDSQKKSFWLLFALLSCGAFFLSFWWGVAETFAALLVSWWIIYRTGLY
Ga0335085_100478065	3300032770	Soil	LDSQKKSFWLLFTLLSCGAFFLHFWWGVAETFVAVFVSWWVIYRTDLF
Ga0335085_124160312	3300032770	Soil	LDSQRKSFWLLFALLSFASFFLPLWWGVAETFAALFVSWWVIYRSGIF
Ga0335079_100001563	3300032783	Soil	LDSQKKSFWLLFTLLSCGAFFLPFWWGVAESFAALFLSWWIIYRTGIY
Ga0335079_101471924	3300032783	Soil	LDSQKKSFWLLFGLLSCGAFFLSFGWGIAETLASLFVSWWVVYRSGVF
Ga0335079_111710452	3300032783	Soil	MVDSQKKSFWLLFLLLSCGAFFLPLGWGIAETFAALFVSWWVIYRSGVF
Ga0335079_114097142	3300032783	Soil	VESQKKSFWLLFALLSSVAFFLPFWWGVVETFAALFVSWWVIYRTGLF
Ga0335079_118411012	3300032783	Soil	LDSQKKSFWLLFGLLSCGAFFLSFGWGIAETFASLFVSWWVVYRSGVF
Ga0335078_100914904	3300032805	Soil	LGTIQLDSQKKSFWLLFGLLSCGAFFLPLGWGVVETFASLFVSWWVIYRSGIF
Ga0335078_101426773	3300032805	Soil	MDSQKKSFWLLFALLSFGAFFLPLWWGVAETFVSLFVSWWVIYRSGIF
Ga0335078_102161632	3300032805	Soil	MDSDGGVQRKCFWLLVTLLSVGSFFLPLGWGVVETLAALVVSWWIVYRSGIL
Ga0335078_110648611	3300032805	Soil	VDSQKKSFWLLFTLLSCGAFFLPLGWGVIETFASLFVSWWVIYRSGVF
Ga0335078_116304982	3300032805	Soil	LDGQRKSFWLLFALLSCGAFFLPFGWGVVETFAALFVSWWVIYRSGIY
Ga0335080_107523511	3300032828	Soil	MDSDTGVQRKCFWLLLTLLSLGAFFLPFGWGVVETLAAAVVSWWIVYRS
Ga0335070_118155392	3300032829	Soil	LDSQKKSFWLLFALLSCVGFFLPFWWGVAETFVAVFVSWWVIYRTDLF
Ga0335081_101655765	3300032892	Soil	LDPQKKSFWLLFAVLSCGAFFLPFGWGVAETFASLFVSWWIIYRTGIF
Ga0335081_118761182	3300032892	Soil	STWDWKPSVLDSQKKSFWLLFTLLSCGAFFLPFWWGVGESLAALFVSWWIIYRTGIY
Ga0335074_1000117823	3300032895	Soil	LDSQKKSFWLLFGLLSCGAFFLSLGWGVVETFASLFVSWWVIYRSGIF
Ga0335074_100286253	3300032895	Soil	LDSQKKSFWLLFFVLSCGAFFLPFWWGVAETFASVFVSWWLIYRTGIF
Ga0335084_108962061	3300033004	Soil	VDSDSGTQRKCFWLLLTLLSLGAIFLPIGWGVVETLASVVVSWWIVYRSGVF
Ga0335073_1000132521	3300033134	Soil	LDSQKKSFWILFALLSCGAFFLPFWWGVVETFAALFVSWWIIYRTGIY
Ga0335073_121426572	3300033134	Soil	VVNFYRRFLLDSQKKSFWLLFTILSLGAFFLPFWWGVAETFAAVFVSWWVIYRSGIF
Ga0335077_100059387	3300033158	Soil	MDSDTGVQRKCFWLLLTLLSLGAFFLPFGWGVVETLAAAVVSWWIVYRSGIF
Ga0335077_103444692	3300033158	Soil	LDSQKKSFWLLFTLLSCGAFFLPFWWGVGESLAALFVSWWIIYRTGIY
Ga0335077_114993531	3300033158	Soil	CFWLLLTLLSLGAFFLPLGWGVVETLAAAVVSWWIVYRSGIL
Ga0335077_119065851	3300033158	Soil	LDSQKKSFWLLFALLSCGAFFLPFWWGVAETFASLVVSWWVIYRTGLF
Ga0326728_10000018290	3300033402	Peat Soil	LDSQKKSFWLLFSALSCGAFFLALGWGVVETLASLFVSWWVIYRSGIF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064917

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences