Metagenome Family F065856

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F065856
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	49 residues
Representative Sequence	MMNTDKKGQNNQETKKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Number of Associated Samples	87
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	18.90 %
% of genes from short scaffolds (< 2000 bps)	86.61 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (68.504 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (54.331 % of family members)
Environment Ontology (ENVO)	Unclassified (90.551 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.063 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01381	HTH_3	46.46
PF00463	ICL	42.52
PF09856	ScfRs	3.94
PF01878	EVE	1.57
PF01274	Malate_synthase	1.57
PF06114	Peptidase_M78	1.57
PF02646	RmuC	0.79
PF02776	TPP_enzyme_N	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG2224	Isocitrate lyase	Energy production and conversion [C]	42.52
COG1673	Predicted RNA-binding protein, contains PUA-like EVE domain	General function prediction only [R]	1.57
COG2225	Malate synthase	Energy production and conversion [C]	1.57
COG2947	Predicted RNA-binding protein, contains EVE domain	General function prediction only [R]	1.57
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
All Organisms	root	All Organisms	31.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
cellular organisms	root	All Organisms → cellular organisms	31.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	11.81 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	11.81 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	11.02 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2.36 %
Pseudobutyrivibrio	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Pseudobutyrivibrio	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2.36 %
unclassified Pseudobutyrivibrio	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Pseudobutyrivibrio → unclassified Pseudobutyrivibrio	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.50 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2.36 %
Pseudobutyrivibrio sp. ACV-2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Pseudobutyrivibrio → unclassified Pseudobutyrivibrio → Pseudobutyrivibrio sp. ACV-2	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001117\|JGI11785J13272_1007749	Not Available	1453	Open in IMG/M
3300005398\|Ga0066858_10139854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	701	Open in IMG/M
3300005400\|Ga0066867_10172149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	800	Open in IMG/M
3300005400\|Ga0066867_10249400	Not Available	642	Open in IMG/M
3300005400\|Ga0066867_10315109	Not Available	559	Open in IMG/M
3300005400\|Ga0066867_10322887	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005400\|Ga0066867_10351409	Not Available	524	Open in IMG/M
3300005401\|Ga0066857_10367845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Pseudobutyrivibrio → unclassified Pseudobutyrivibrio → Pseudobutyrivibrio sp. ACV-2	506	Open in IMG/M
3300005408\|Ga0066848_10130885	Not Available	679	Open in IMG/M
3300005408\|Ga0066848_10188442	Not Available	554	Open in IMG/M
3300005408\|Ga0066848_10203519	Not Available	530	Open in IMG/M
3300005422\|Ga0066829_10110753	Not Available	822	Open in IMG/M
3300005422\|Ga0066829_10245546	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300005423\|Ga0066828_10171954	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300005424\|Ga0066826_10166762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	772	Open in IMG/M
3300005424\|Ga0066826_10265498	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005426\|Ga0066847_10125576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	797	Open in IMG/M
3300005427\|Ga0066851_10108859	Not Available	896	Open in IMG/M
3300005427\|Ga0066851_10160745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	714	Open in IMG/M
3300005428\|Ga0066863_10263208	Not Available	602	Open in IMG/M
3300005430\|Ga0066849_10032565	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300005431\|Ga0066854_10099366	Not Available	970	Open in IMG/M
3300005431\|Ga0066854_10118305	Not Available	885	Open in IMG/M
3300005431\|Ga0066854_10281275	Not Available	561	Open in IMG/M
3300005431\|Ga0066854_10314093	Not Available	529	Open in IMG/M
3300005508\|Ga0066868_10194898	Not Available	622	Open in IMG/M
3300005509\|Ga0066827_10145631	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005514\|Ga0066866_10215469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	670	Open in IMG/M
3300005514\|Ga0066866_10306357	Not Available	541	Open in IMG/M
3300005520\|Ga0066864_10171242	Not Available	621	Open in IMG/M
3300005551\|Ga0066843_10130632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	716	Open in IMG/M
3300005551\|Ga0066843_10135875	Not Available	700	Open in IMG/M
3300005593\|Ga0066837_10312585	Not Available	550	Open in IMG/M
3300005594\|Ga0066839_10198884	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300005597\|Ga0066832_10067965	Not Available	1095	Open in IMG/M
3300005603\|Ga0066853_10262620	Not Available	568	Open in IMG/M
3300005603\|Ga0066853_10279291	Not Available	548	Open in IMG/M
3300005603\|Ga0066853_10320262	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005604\|Ga0066852_10183977	Not Available	722	Open in IMG/M
3300005604\|Ga0066852_10226442	Not Available	638	Open in IMG/M
3300005605\|Ga0066850_10275474	Not Available	596	Open in IMG/M
3300006011\|Ga0066373_10221666	Not Available	553	Open in IMG/M
3300006012\|Ga0066374_10007084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2817	Open in IMG/M
3300006090\|Ga0082015_1006465	All Organisms → cellular organisms → Bacteria → Proteobacteria	2053	Open in IMG/M
3300006091\|Ga0082018_1012272	Not Available	1521	Open in IMG/M
3300006091\|Ga0082018_1075546	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300006093\|Ga0082019_1037988	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300006308\|Ga0068470_1065279	Not Available	1062	Open in IMG/M
3300006313\|Ga0068472_10291053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1394	Open in IMG/M
3300006323\|Ga0068497_1019516	Not Available	925	Open in IMG/M
3300006338\|Ga0068482_1654369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	601	Open in IMG/M
3300006567\|Ga0099958_1187875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	548	Open in IMG/M
3300006736\|Ga0098033_1073220	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300006750\|Ga0098058_1155655	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300006926\|Ga0098057_1046789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1064	Open in IMG/M
3300007515\|Ga0105021_1074429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2225	Open in IMG/M
3300008735\|Ga0115657_1165074	Not Available	1221	Open in IMG/M
3300009104\|Ga0117902_1091166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	3394	Open in IMG/M
3300012950\|Ga0163108_10551408	Not Available	745	Open in IMG/M
3300012950\|Ga0163108_10621736	Not Available	698	Open in IMG/M
3300012950\|Ga0163108_10876883	Not Available	580	Open in IMG/M
3300012950\|Ga0163108_11076388	Not Available	519	Open in IMG/M
3300012950\|Ga0163108_11143749	Not Available	501	Open in IMG/M
3300020243\|Ga0211655_1000772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	7930	Open in IMG/M
3300020256\|Ga0211645_1030177	Not Available	918	Open in IMG/M
3300020262\|Ga0211537_1007476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2822	Open in IMG/M
3300020327\|Ga0211573_1030641	Not Available	1470	Open in IMG/M
3300020328\|Ga0211567_1012157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2217	Open in IMG/M
3300020344\|Ga0211570_1021769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1829	Open in IMG/M
3300020361\|Ga0211531_1091948	Not Available	825	Open in IMG/M
3300020364\|Ga0211538_1223396	Not Available	529	Open in IMG/M
3300020369\|Ga0211709_10140861	Not Available	735	Open in IMG/M
3300020373\|Ga0211660_10278637	Not Available	556	Open in IMG/M
3300020383\|Ga0211646_10176841	Not Available	764	Open in IMG/M
3300020383\|Ga0211646_10240714	Not Available	643	Open in IMG/M
3300020398\|Ga0211637_10448083	Not Available	510	Open in IMG/M
3300020399\|Ga0211623_10381572	Not Available	503	Open in IMG/M
3300020407\|Ga0211575_10276337	Not Available	696	Open in IMG/M
3300020443\|Ga0211544_10134366	Not Available	960	Open in IMG/M
3300020444\|Ga0211578_10182030	Not Available	840	Open in IMG/M
3300020449\|Ga0211642_10509952	Not Available	516	Open in IMG/M
3300020458\|Ga0211697_10212698	Not Available	799	Open in IMG/M
3300021352\|Ga0206680_10332636	Not Available	590	Open in IMG/M
3300021791\|Ga0226832_10356912	Not Available	607	Open in IMG/M
3300022225\|Ga0187833_10071533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2310	Open in IMG/M
3300022225\|Ga0187833_10234181	Not Available	1056	Open in IMG/M
3300022225\|Ga0187833_10328564	Not Available	839	Open in IMG/M
3300022225\|Ga0187833_10350755	Not Available	801	Open in IMG/M
3300022225\|Ga0187833_10360366	Not Available	786	Open in IMG/M
3300022225\|Ga0187833_10391326	Not Available	742	Open in IMG/M
3300022225\|Ga0187833_10509266	Not Available	616	Open in IMG/M
3300022225\|Ga0187833_10557525	Not Available	577	Open in IMG/M
3300022225\|Ga0187833_10576472	Not Available	563	Open in IMG/M
3300022225\|Ga0187833_10651274	Not Available	515	Open in IMG/M
3300022227\|Ga0187827_10011672	All Organisms → cellular organisms → Bacteria	8937	Open in IMG/M
3300022227\|Ga0187827_10025502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	5277	Open in IMG/M
3300022227\|Ga0187827_10245376	Not Available	1185	Open in IMG/M
3300022227\|Ga0187827_10419749	Not Available	824	Open in IMG/M
3300022227\|Ga0187827_10689848	Not Available	581	Open in IMG/M
3300022227\|Ga0187827_10776076	Not Available	533	Open in IMG/M
3300025072\|Ga0208920_1102031	Not Available	524	Open in IMG/M
3300025078\|Ga0208668_1060471	Not Available	691	Open in IMG/M
3300025776\|Ga0208699_1042367	Not Available	518	Open in IMG/M
3300026082\|Ga0208750_1019204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1644	Open in IMG/M
3300026091\|Ga0207962_1077451	Not Available	639	Open in IMG/M
3300026186\|Ga0208128_1005602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3643	Open in IMG/M
3300026188\|Ga0208274_1025048	Not Available	1712	Open in IMG/M
3300026192\|Ga0207986_1113933	Not Available	572	Open in IMG/M
3300026207\|Ga0208895_1146206	Not Available	618	Open in IMG/M
3300026207\|Ga0208895_1154568	Not Available	596	Open in IMG/M
3300026208\|Ga0208640_1086316	Not Available	682	Open in IMG/M
3300026208\|Ga0208640_1117758	Not Available	544	Open in IMG/M
3300026210\|Ga0208642_1102696	Not Available	609	Open in IMG/M
3300026211\|Ga0208132_1110302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300026256\|Ga0208639_1156150	Not Available	524	Open in IMG/M
3300026259\|Ga0208896_1109946	Not Available	768	Open in IMG/M
3300026260\|Ga0208408_1123285	Not Available	746	Open in IMG/M
3300026262\|Ga0207990_1159531	Not Available	531	Open in IMG/M
3300026264\|Ga0207991_1016504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2657	Open in IMG/M
3300027699\|Ga0209752_1027885	Not Available	2045	Open in IMG/M
3300028489\|Ga0257112_10133566	Not Available	891	Open in IMG/M
3300031757\|Ga0315328_10074333	Not Available	1930	Open in IMG/M
3300032130\|Ga0315333_10045629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1951	Open in IMG/M
3300032360\|Ga0315334_11586924	Not Available	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	77.17%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.75%
Coastal	Environmental → Aquatic → Marine → Coastal	3.15%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	3.15%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	69.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.75%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.72%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	3.15%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.15%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.79%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	54.33%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.75%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	12.60%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	3.15%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.15%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	3.15%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	3.94%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	1.57%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.79%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.79%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001117	Marine microbial communities from the Deep Pacific Ocean - MP2098	Environmental	Open in IMG/M
3300005398	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005401	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203	Environmental	Open in IMG/M
3300005408	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72	Environmental	Open in IMG/M
3300005422	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43	Environmental	Open in IMG/M
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005428	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300005520	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251	Environmental	Open in IMG/M
3300005551	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89A	Environmental	Open in IMG/M
3300005593	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86	Environmental	Open in IMG/M
3300005594	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82	Environmental	Open in IMG/M
3300005597	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B	Environmental	Open in IMG/M
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental	Open in IMG/M
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental	Open in IMG/M
3300005605	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67	Environmental	Open in IMG/M
3300006011	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV	Environmental	Open in IMG/M
3300006012	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006091	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP125	Environmental	Open in IMG/M
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300007515	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300008735	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um	Environmental	Open in IMG/M
3300009104	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um	Environmental	Open in IMG/M
3300009109	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate b	Environmental	Open in IMG/M
3300012950	Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaG	Environmental	Open in IMG/M
3300020243	Marine microbial communities from Tara Oceans - TARA_B100000953 (ERX556050-ERR599055)	Environmental	Open in IMG/M
3300020256	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556010-ERR599067)	Environmental	Open in IMG/M
3300020262	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556100-ERR599172)	Environmental	Open in IMG/M
3300020327	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556115-ERR599070)	Environmental	Open in IMG/M
3300020328	Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX555937-ERR599015)	Environmental	Open in IMG/M
3300020344	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)	Environmental	Open in IMG/M
3300020361	Marine microbial communities from Tara Oceans - TARA_B100000071 (ERX556078-ERR599167)	Environmental	Open in IMG/M
3300020364	Marine microbial communities from Tara Oceans - TARA_B100000097 (ERX556021-ERR599037)	Environmental	Open in IMG/M
3300020369	Marine microbial communities from Tara Oceans - TARA_B100000446 (ERX556016-ERR599044)	Environmental	Open in IMG/M
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental	Open in IMG/M
3300020383	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)	Environmental	Open in IMG/M
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental	Open in IMG/M
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental	Open in IMG/M
3300020407	Marine microbial communities from Tara Oceans - TARA_B100001105 (ERX556033-ERR599115)	Environmental	Open in IMG/M
3300020443	Marine microbial communities from Tara Oceans - TARA_B100001179 (ERX556000-ERR598944)	Environmental	Open in IMG/M
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025078	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG (SPAdes)	Environmental	Open in IMG/M
3300025776	Marine microbial communities from the Deep Pacific Ocean - MP2097 (SPAdes)	Environmental	Open in IMG/M
3300026082	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV (SPAdes)	Environmental	Open in IMG/M
3300026091	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026186	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026192	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV89 (SPAdes)	Environmental	Open in IMG/M
3300026204	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47 (SPAdes)	Environmental	Open in IMG/M
3300026207	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82 (SPAdes)	Environmental	Open in IMG/M
3300026208	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)	Environmental	Open in IMG/M
3300026210	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV251 (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300026262	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75 (SPAdes)	Environmental	Open in IMG/M
3300026264	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275 (SPAdes)	Environmental	Open in IMG/M
3300027699	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m (SPAdes)	Environmental	Open in IMG/M
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11785J13272_10077492	3300001117	Deep Ocean	MMNRDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0066858_101398542	3300005398	Marine	MNTDKKRQNNQETEKTEQNFRNDQFRQPSIYSRHDDVCFLDQADHQSSDN*
Ga0066867_101721492	3300005400	Marine	MNADKKGRNNQEVEKTEQGSQGDQFRQPSIYSRHDDVCFLDQADHQDSQ*
Ga0066867_102494001	3300005400	Marine	MMNVDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQVDHQNSDN*
Ga0066867_103151091	3300005400	Marine	MNTDKKRQNNQGTEKTEQTSQNDQFRQPSIYNRHDDVCFLDQADHQSSDN*
Ga0066867_103228871	3300005400	Marine	MMNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQVDHQDSQ*
Ga0066867_103514092	3300005400	Marine	MNTDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQ
Ga0066857_103678451	3300005401	Marine	MMNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQAGHQNSDN*
Ga0066848_101308851	3300005408	Marine	MNKDKKGQNNQEIGKTERSSQGDQFRQPSIYSRHDDVCFLDQADHQDSQ*
Ga0066848_101884421	3300005408	Marine	ETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0066848_102035192	3300005408	Marine	MMNTDKKRQNNQGTEKTEQTSQNDQFRQPSIYNRHDDVCFLDQADHQSSDN*
Ga0066829_101107532	3300005422	Marine	MMNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQANHQSSE*
Ga0066829_102455462	3300005422	Marine	MNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQ
Ga0066828_101719542	3300005423	Marine	MNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQVDHQDSQ*
Ga0066826_101667622	3300005424	Marine	MNTDEKRQNNQETEKTEQNSQSDQFRQPSIYSKHDEVCFLDQADHQSSGN*
Ga0066826_102654982	3300005424	Marine	DKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQVDHQDSQ*
Ga0066847_101255762	3300005426	Marine	MNGDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQSSE*
Ga0066851_101088592	3300005427	Marine	NMMNTDKKGRNNQEVEKTEQGSQGDQFRQPSIYSRHDDVCFLDQADHQDSQ*
Ga0066851_101607452	3300005427	Marine	MMNTDKKGRNNQEVEKTEQGSQGSQGDQFRQPCIYSRHDDVCFLDQANHQSSE*
Ga0066863_102632082	3300005428	Marine	QNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQVDHQDSQ*
Ga0066849_100325652	3300005430	Marine	MMNRDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSGN*
Ga0066854_100993661	3300005431	Marine	MNMMNTDKRGQNNKETEKTEQNSQNDQFRQPSIYSRHDDVCFLDQADHQSSDN*
Ga0066854_101183052	3300005431	Marine	MSTDKKRQNDQETGKTEQNSQSGQFRQPSIYSRHDDVCFLDQTDHQSS
Ga0066854_102812751	3300005431	Marine	MMNTDKKGQNSQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQEADHQSSDN*
Ga0066854_103140931	3300005431	Marine	MMNTDKKGQNNQEIGKTEQGSQGGQFRQPSIYSRHDDVCFLDQADHQNSDNQ*
Ga0066868_101948982	3300005508	Marine	MMNVDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQSSE*
Ga0066827_101456312	3300005509	Marine	MMNADKKGRNNQEVEKTEQGSQGDQFRQPSIYSRHDDVCFLDQADHQDSQ*
Ga0066866_102154692	3300005514	Marine	MNTDKKGQNSQETKKTEQNSQGNQFRQPSIYSRHDDVCFLDQEVDHQSSDN*
Ga0066866_103063571	3300005514	Marine	MMNVDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0066864_101712422	3300005520	Marine	MNKDKKGQNNQEIWKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0066843_101306322	3300005551	Marine	MMNADKKGQNNQEIGKTEQSSQSDQFRQPSIYSRHDDVCFLDQADHQSSDN*
Ga0066843_101358752	3300005551	Marine	QEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0066837_103125851	3300005593	Marine	MNADKKGQNNRETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQSSE*
Ga0066839_101988842	3300005594	Marine	MNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0066832_100679652	3300005597	Marine	MMNTDKKGQNNQETKKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQSSE*
Ga0066853_102626201	3300005603	Marine	MNTDKKRQNNQGTEKTEQNSQNDQFRQPSIYNRHDDVCFLDQADHQSSDN*
Ga0066853_102792912	3300005603	Marine	MNTDKKGRNNQEVEKTEQGSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0066853_103202622	3300005603	Marine	MMNGDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSD
Ga0066852_101839771	3300005604	Marine	MMNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQADHQNSDN*
Ga0066852_102264422	3300005604	Marine	MMNADKKGQNNRETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0066850_102754742	3300005605	Marine	MMNTDKNGQNNQEIGKTEQSSQGDRFRQPSIYSRHDDVCFLDQADHQNSGN*
Ga0066373_102216662	3300006011	Marine	MNTDKNRQNNQETKKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN*
Ga0066374_100070842	3300006012	Marine	MMNTDKKRQNNQETKKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN*
Ga0082015_10064652	3300006090	Marine	MMNTDKKGRNKQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQADHQNSDN*
Ga0082018_10122721	3300006091	Marine	INMMNTDKKRQNNQGTEKTEQTSQNDQFRQPSIYNRHDDVCFLDQADHQSSDN*
Ga0082018_10755462	3300006091	Marine	MNRDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQANHQNSDN*
Ga0082019_10379882	3300006093	Marine	MMNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQADHQNSNN*
Ga0068470_10652792	3300006308	Marine	MSTDKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN*
Ga0068472_102910533	3300006313	Marine	MMNTDKKRQNNQETKRTEQNSQNNGQFIRQSSIYSRHDDICFLDQADHQNSDN*
Ga0068497_10195161	3300006323	Marine	MMSTDKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDICFLDQADHQNSDN*
Ga0068482_16543692	3300006338	Marine	MMSTDKKRENNQETKKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN*
Ga0099958_11878752	3300006567	Marine	MMNTDKKRQNNQETKKTEQNSQNGQFRQSSIYSRHDDICFLDQADHQNSDN*
Ga0098033_10732202	3300006736	Marine	MNRDKKGQNNQEIGKTEQSSQGDQFRQPCIYSRHDDVCFLDQADHQNSDN*
Ga0098058_11556552	3300006750	Marine	MNTDKKGQNNQETKKTEQSSQGDQFRQPSIYSRHDDVCFLDQVDHQDSQ*
Ga0098057_10467892	3300006926	Marine	MMNVDKKGQNNQETKKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0105021_10744293	3300007515	Marine	MSTDSKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN*
Ga0115657_11650741	3300008735	Marine	MSTDSKKRQNSQETEKTEQSSQNGQFRQSSIYSRHDDICFLDQA
Ga0117902_10911662	3300009104	Marine	MMSTDSKKGQNNQETKKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN*
Ga0117922_12216961	3300009109	Marine	MMSTDKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDIC
Ga0163108_105514082	3300012950	Seawater	MSADKKRQNDQETGKTEQNSQSGQFRQPSIYSRHDDVCFLDQTDHQNSDN*
Ga0163108_106217362	3300012950	Seawater	MMSKDKKGQNNQEIGKTEQGSQSDQFRQPSIYSRHDDVCFLDQADHQDSQ*
Ga0163108_108768832	3300012950	Seawater	MMNADKKRQNNQGTEKTEQNSQNDQFRQPSIYSRHDDVCFLDQADHQSSDN*
Ga0163108_110763882	3300012950	Seawater	MMNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFL
Ga0163108_111437491	3300012950	Seawater	MNTDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN*
Ga0211655_10007724	3300020243	Marine	MMNTDKKGQNNQETKKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0211645_10301772	3300020256	Marine	MMNRDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0211537_10074762	3300020262	Marine	MMNTDKKGQNKQEIEKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDS
Ga0211573_10306412	3300020327	Marine	KTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0211567_10121573	3300020328	Marine	MMNTDKKGQNNQEIEKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0211570_10217692	3300020344	Marine	MMNTDKKGQNKQEIEKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0211531_10919482	3300020361	Marine	MNTDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0211531_11606601	3300020361	Marine	MNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCF
Ga0211538_12233962	3300020364	Marine	MNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQANHQSSE
Ga0211709_101408612	3300020369	Marine	MNTDKNRQNNQETKKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQDSDN
Ga0211660_102786372	3300020373	Marine	MNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0211646_101768412	3300020383	Marine	MMNTDKKGQNNQEIEKTEQSSQGDQFRQPSIYSRHDDVCFLDQAGHQNSDN
Ga0211646_102407142	3300020383	Marine	MMNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQANHQSSE
Ga0211637_104480832	3300020398	Marine	TDKKRQNNQETKRTEQNSHNNGQFIRQSSIYSRHDDICFLDQADHQNSDN
Ga0211623_103815722	3300020399	Marine	MMSTDSKKRQNSQETEKTEQSSQNGQFRQSSIYSRHDDICFLDQADHQNSGN
Ga0211575_102763372	3300020407	Marine	RSMMNTDKKRQNNQETKKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN
Ga0211544_101343661	3300020443	Marine	MNAEKKRQNNQETKKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN
Ga0211578_101820302	3300020444	Marine	MMSTDKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDICFLDQADHQNSGN
Ga0211642_105099521	3300020449	Marine	MNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQVDHQDSQ
Ga0211697_102126981	3300020458	Marine	MSADKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDICFLDQADHQNSDN
Ga0206680_103326362	3300021352	Seawater	MMSTDNKRQNSQETEKTEQSSQNGQFRQSSIYSRHDDICFLDQADHQNSDN
Ga0226832_103569122	3300021791	Hydrothermal Vent Fluids	MSTDKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDICFLDQANHQSSDN
Ga0187833_100715333	3300022225	Seawater	MMNEDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQAGHQNSDN
Ga0187833_102341812	3300022225	Seawater	MMSKDKKGQNNQEIGKTEQSSQNDQFRQPSIYSRHDDVCFLDQADHQSSE
Ga0187833_103285641	3300022225	Seawater	MMSKDKKGQNNQEIGKTEQGSQSDQFRQPSIYSRHDDVCFLDQADHQDSQ
Ga0187833_103507552	3300022225	Seawater	MNTDKKRQNNQGTEKTEQTSQNDQFRQPSIYNRHDDVCFLDQADHQSSDN
Ga0187833_103603662	3300022225	Seawater	MNTDKKRQNNQETEKTEQNFRNDQFRQPSIYSRHDDVCFLDQADHQSSDN
Ga0187833_103913261	3300022225	Seawater	MMNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQA
Ga0187833_105092661	3300022225	Seawater	RNNQGVEKTEQGSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0187833_105575252	3300022225	Seawater	MNGDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQSSE
Ga0187833_105764722	3300022225	Seawater	MMNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQANHQNSDN
Ga0187833_106512742	3300022225	Seawater	MMNTDKKGRNKQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQADHQNSDN
Ga0187827_100116722	3300022227	Seawater	MMNTDKKGQNNQEIEKTEQSSQGNQFRQPSIYSRHDDVCFLDQAGHQNSDN
Ga0187827_100255021	3300022227	Seawater	QNNQETEKTEQNSQSDQFRQPSIYSKHDEVCFLDQADHQSSGN
Ga0187827_102453762	3300022227	Seawater	MNADKKGRNNQEVEKTEQGSQGDQFRQPSIYSRHDDVCFLDQADHQDSQ
Ga0187827_104197492	3300022227	Seawater	MMNTDKKGQNNQEIKKAEQNSQGSQFRQPSIYSKHDDVCFLDQADHQNSDN
Ga0187827_106898481	3300022227	Seawater	MNKDKKGQNNQEIWKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0187827_107760761	3300022227	Seawater	MNRDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0208920_11020311	3300025072	Marine	DKKGQNNQETKKTEQNSQGGRFRQPSIYSRHDDVCFLDQVDHQDSQ
Ga0208668_10604712	3300025078	Marine	MNVDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0208699_10423671	3300025776	Deep Ocean	MMNADKKGQNNRETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0208750_10192042	3300026082	Marine	MMNTGKKRQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQSSE
Ga0207962_10774511	3300026091	Marine	MMNTDKKRQNNQETKKTEQNSQNGQFRQSSIYSRHDDVCFLDQADHQNSDN
Ga0208128_10056023	3300026186	Marine	MMNTDKNGQNNQETKKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQSSE
Ga0208274_10250482	3300026188	Marine	MMNTDKKGQNKQEIEKTEQSSQGDQFRQPSIYSRHDDVCFLDQANHQSSE
Ga0207986_11139331	3300026192	Marine	MMNTDKKRQNNQGTEKTEQTSQNDQFRQPSIYNRHDDVCFLDQADHQSSDN
Ga0208521_11516732	3300026204	Marine	MMNTDKKGQNNQEIEKTEQSSQGDQFRQPSIYSRH
Ga0208895_11462062	3300026207	Marine	MMNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0208895_11545681	3300026207	Marine	MNTDKKGQNSQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQEADHQSSDN
Ga0208640_10863162	3300026208	Marine	MNKDKKGQNNQEIGKTERSSQGDQFRQPSIYSRHDDVCFLDQADHQDSQ
Ga0208640_11177581	3300026208	Marine	MNTDKKGQNNQETKKTEQNSQGDQFRQPSIYSRHDDVCFLDQADHQNSD
Ga0208642_11026961	3300026210	Marine	MMNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQADHQNSNN
Ga0208132_11103022	3300026211	Marine	MNTDEKRQNNQETEKTEQNSQSDQFRQPSIYSKHDEVCFLDQADHQSSGN
Ga0208639_11561501	3300026256	Marine	MMNTDKKGRNNQEVEKTEQGSQGDQFRQPCIYSRHDDVCFLDQADHQNSDN
Ga0208896_11099461	3300026259	Marine	MMNADKKGRNNQEVEKTEQGSQGDQFRQPSIYSRHDDVCFLDQADHQDSQ
Ga0208408_11232851	3300026260	Marine	YIPNMMNKDKKGQNNQEIGKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQNSDN
Ga0207990_11595312	3300026262	Marine	MMNRDKKKGQNNQGTEKTEQNSQNDQFRQPSIYNRHDDICFLDQADHQSSDN
Ga0207991_10165043	3300026264	Marine	MMNTDKKGQNNQETKKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQDSQ
Ga0209752_10278852	3300027699	Marine	MMNVDKKGQNNQETKKTEQSSQGDQFRQPSIYSRHDDVCFLDQADHQSSE
Ga0257112_101335662	3300028489	Marine	TEQNSQNNGQFIRQSSIYSRHDDICFLDQADHQNSDN
Ga0315328_100743333	3300031757	Seawater	MSTDKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDICFLDQADHQNSDN
Ga0315333_100456292	3300032130	Seawater	MMSTDKKRQNSQETEKTEQNSQNGQFRQSSIYSRHDDICFLDQADHQNSDN
Ga0315334_115869242	3300032360	Seawater	MMSTDKKRQNSQETEKTEQSSQNGQFRQSSIYSRHDDICFLDQADHQNSGN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065856

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences