Metagenome Family F066905

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F066905
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	53 residues
Representative Sequence	MPEEGRNCGCGCNNNGGFLNGLFGGCGCDSEILFFIIIFLLLFTNFGCGCQR
Number of Associated Samples	73
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.16 %
% of genes near scaffold ends (potentially truncated)	19.84 %
% of genes from short scaffolds (< 2000 bps)	61.11 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (60.317 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces (46.825 % of family members)
Environment Ontology (ENVO)	Unclassified (99.206 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.25% β-sheet: 0.00% Coil/Unstructured: 68.75%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF01136	Peptidase_U32	19.05
PF12392	DUF3656	6.35
PF00383	dCMP_cyt_deam_1	3.97
PF09419	PGP_phosphatase	2.38
PF00575	S1	2.38
PF08239	SH3_3	1.59
PF12647	RNHCP	1.59
PF06695	Sm_multidrug_ex	1.59
PF12733	Cadherin-like	1.59
PF03699	UPF0182	1.59
PF14815	NUDIX_4	0.79
PF02616	SMC_ScpA	0.79
PF08281	Sigma70_r4_2	0.79
PF01596	Methyltransf_3	0.79
PF13263	PHP_C	0.79
PF00696	AA_kinase	0.79
PF00578	AhpC-TSA	0.79
PF13579	Glyco_trans_4_4	0.79
PF02163	Peptidase_M50	0.79
PF10509	GalKase_gal_bdg	0.79
PF07670	Gate	0.79
PF07486	Hydrolase_2	0.79
PF06414	Zeta_toxin	0.79
PF01751	Toprim	0.79
PF01832	Glucosaminidase	0.79
PF12746	GNAT_acetyltran	0.79
PF10672	Methyltrans_SAM	0.79
PF13654	AAA_32	0.79
PF00005	ABC_tran	0.79
PF00485	PRK	0.79
PF04203	Sortase	0.79
PF00044	Gp_dh_N	0.79
PF01479	S4	0.79
PF07521	RMMBL	0.79
PF04025	DUF370	0.79
PF03840	SecG	0.79
PF00701	DHDPS	0.79
PF02881	SRP54_N	0.79
PF13946	DUF4214	0.79
PF00216	Bac_DNA_binding	0.79
PF00312	Ribosomal_S15	0.79
PF08141	SspH	0.79
PF00849	PseudoU_synth_2	0.79
PF08378	NERD	0.79
PF08245	Mur_ligase_M	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0826	23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family	Translation, ribosomal structure and biogenesis [J]	19.05
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.59
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	1.59
COG2426	Uncharacterized membrane protein	Function unknown [S]	1.59
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.79
COG0184	Ribosomal protein S15P/S13E	Translation, ribosomal structure and biogenesis [J]	0.79
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.79
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.79
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.79
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.79
COG1354	Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family	Replication, recombination and repair [L]	0.79
COG2052	Regulator of extracellular matrix RemA, YlzA/DUF370 family	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3773	Cell wall hydrolase CwlJ, involved in spore germination	Cell cycle control, cell division, chromosome partitioning [D]	0.79
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.79
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.32 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.32 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.32 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.35 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	56.35 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	45.24 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	39.68 %
Unclassified	root	N/A	39.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.68 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	9.52 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.59 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.68 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	8.73 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.59 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	0.79 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.68 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples	2.38 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.59 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.79 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.68 %
Clostridium sp. CAG:273	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:273	1.59 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.59 %
Clostridium sp. CAG:440	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:440	0.79 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	0.79 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2149837016\|STU__NODE_7413_len_7696_cov_18_301455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	7724	Open in IMG/M
2149837022\|STU__NODE_18147_len_2014_cov_13_316286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:273	2060	Open in IMG/M
2225789004\|2227488943	Not Available	801	Open in IMG/M
3300000114\|IMNBL3_c10000003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	215358	Open in IMG/M
3300000114\|IMNBL3_c10000586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	36212	Open in IMG/M
3300000278\|EM209_1069507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6282	Open in IMG/M
3300000281\|EM227_1000160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	135975	Open in IMG/M
3300000281\|EM227_1000673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	14379	Open in IMG/M
3300000285\|EM251_1004056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	10280	Open in IMG/M
3300001598\|EMG_10000222	All Organisms → cellular organisms → Bacteria	90517	Open in IMG/M
3300002597\|DRAFT_10216885	Not Available	1749	Open in IMG/M
3300006045\|Ga0082212_10158653	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300006131\|Ga0080692_1010188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	1477	Open in IMG/M
3300006138\|Ga0080701_1000577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	36247	Open in IMG/M
3300006145\|Ga0080708_1008497	Not Available	2373	Open in IMG/M
3300006217\|Ga0081461_1189163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	739	Open in IMG/M
3300006463\|Ga0100176_1000597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	43085	Open in IMG/M
3300008622\|Ga0111363_128026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	708	Open in IMG/M
3300008725\|Ga0115670_1054581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	529	Open in IMG/M
3300010163\|Ga0136175_10007595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	24263	Open in IMG/M
3300010163\|Ga0136175_10010258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	19516	Open in IMG/M
3300010163\|Ga0136175_10472010	Not Available	754	Open in IMG/M
3300010998\|Ga0139311_1004519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	38377	Open in IMG/M
3300011008\|Ga0139362_1562082	Not Available	505	Open in IMG/M
3300012979\|Ga0123348_10081570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1772	Open in IMG/M
3300012979\|Ga0123348_10476949	Not Available	688	Open in IMG/M
3300014028\|Ga0117810_1028004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	963	Open in IMG/M
3300014203\|Ga0172378_10121498	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300014808\|Ga0134443_1000358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	35408	Open in IMG/M
3300014963\|Ga0134523_1001245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	52971	Open in IMG/M
3300018407\|Ga0187900_1064427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:440	1983	Open in IMG/M
3300018427\|Ga0187903_10069281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3445	Open in IMG/M
3300018427\|Ga0187903_10434149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1066	Open in IMG/M
3300018427\|Ga0187903_10988056	Not Available	615	Open in IMG/M
3300018427\|Ga0187903_10992543	Not Available	613	Open in IMG/M
3300018427\|Ga0187903_11074058	Not Available	582	Open in IMG/M
3300018427\|Ga0187903_11230299	Not Available	533	Open in IMG/M
3300018430\|Ga0187902_10311862	Not Available	1404	Open in IMG/M
3300018430\|Ga0187902_10895401	Not Available	708	Open in IMG/M
3300018475\|Ga0187907_10835845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	991	Open in IMG/M
3300018475\|Ga0187907_11429014	Not Available	686	Open in IMG/M
3300018475\|Ga0187907_11912956	Not Available	563	Open in IMG/M
3300018493\|Ga0187909_11647134	Not Available	580	Open in IMG/M
3300018493\|Ga0187909_11774614	Not Available	553	Open in IMG/M
3300018493\|Ga0187909_12061673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	502	Open in IMG/M
3300018494\|Ga0187911_10979517	Not Available	890	Open in IMG/M
3300018494\|Ga0187911_11229724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	765	Open in IMG/M
3300018494\|Ga0187911_11487486	Not Available	674	Open in IMG/M
3300018494\|Ga0187911_11547349	Not Available	656	Open in IMG/M
3300018494\|Ga0187911_11616606	Not Available	637	Open in IMG/M
3300018495\|Ga0187908_10447578	Not Available	1467	Open in IMG/M
3300018495\|Ga0187908_11872134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	558	Open in IMG/M
3300018878\|Ga0187910_10801490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1108	Open in IMG/M
3300018878\|Ga0187910_11022537	Not Available	940	Open in IMG/M
3300018878\|Ga0187910_11527604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	715	Open in IMG/M
3300019376\|Ga0187899_10601001	Not Available	516	Open in IMG/M
3300019378\|Ga0187901_10217705	Not Available	1631	Open in IMG/M
3300021254\|Ga0223824_10000523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	48495	Open in IMG/M
3300021254\|Ga0223824_10049363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	3875	Open in IMG/M
3300021255\|Ga0223825_10451337	Not Available	622	Open in IMG/M
3300021256\|Ga0223826_10402754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1121	Open in IMG/M
3300021387\|Ga0223845_10608558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → environmental samples → Clostridium sp. CAG:273	1725	Open in IMG/M
3300021387\|Ga0223845_12266507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	9598	Open in IMG/M
3300021399\|Ga0224415_10000646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	46332	Open in IMG/M
3300021399\|Ga0224415_10000741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	43340	Open in IMG/M
3300021399\|Ga0224415_10013119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	7989	Open in IMG/M
3300021400\|Ga0224422_10151743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	503	Open in IMG/M
3300021400\|Ga0224422_11642598	Not Available	548	Open in IMG/M
3300021400\|Ga0224422_11696284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2908	Open in IMG/M
3300021400\|Ga0224422_11943271	Not Available	705	Open in IMG/M
3300021400\|Ga0224422_12546216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	11320	Open in IMG/M
3300022661\|Ga0216339_10327655	Not Available	1402	Open in IMG/M
3300022753\|Ga0216341_10719598	Not Available	755	Open in IMG/M
3300023497\|Ga0257058_104582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5419	Open in IMG/M
3300024268\|Ga0257090_12066716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	533	Open in IMG/M
3300024269\|Ga0257076_10065413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	5315	Open in IMG/M
3300024269\|Ga0257076_10510523	Not Available	1364	Open in IMG/M
3300024269\|Ga0257076_10635403	Not Available	1189	Open in IMG/M
3300024269\|Ga0257076_11598721	Not Available	662	Open in IMG/M
3300024272\|Ga0257077_11730458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	665	Open in IMG/M
3300024303\|Ga0257089_10827734	Not Available	929	Open in IMG/M
3300024303\|Ga0257089_11213706	Not Available	726	Open in IMG/M
3300024303\|Ga0257089_11541940	Not Available	621	Open in IMG/M
3300028797\|Ga0265301_10515927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	888	Open in IMG/M
3300028805\|Ga0247608_10780203	Not Available	911	Open in IMG/M
3300028886\|Ga0256407_10223189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1607	Open in IMG/M
3300029103\|Ga0169220_102935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5921	Open in IMG/M
3300029133\|Ga0168787_120769	Not Available	1706	Open in IMG/M
3300029250\|Ga0167474_1000730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	34198	Open in IMG/M
3300029256\|Ga0168827_102134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	14259	Open in IMG/M
3300029305\|Ga0307249_10136429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	8078	Open in IMG/M
3300029305\|Ga0307249_10146340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	7583	Open in IMG/M
3300029305\|Ga0307249_10307703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3981	Open in IMG/M
3300029305\|Ga0307249_10362966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3470	Open in IMG/M
3300029305\|Ga0307249_10416635	Not Available	3100	Open in IMG/M
3300029305\|Ga0307249_10452256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2897	Open in IMG/M
3300029305\|Ga0307249_10467343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2821	Open in IMG/M
3300029305\|Ga0307249_10607947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2277	Open in IMG/M
3300029305\|Ga0307249_10732234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1960	Open in IMG/M
3300029305\|Ga0307249_11316997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1219	Open in IMG/M
3300029305\|Ga0307249_11352660	Not Available	1193	Open in IMG/M
3300029305\|Ga0307249_11464644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1119	Open in IMG/M
3300029305\|Ga0307249_11544949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1072	Open in IMG/M
3300029305\|Ga0307249_12880597	Not Available	647	Open in IMG/M
3300029439\|Ga0243904_1040328	Not Available	836	Open in IMG/M
3300029573\|Ga0245101_100600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	44878	Open in IMG/M
3300029589\|Ga0245106_103060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	10750	Open in IMG/M
3300029619\|Ga0245131_1000031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	282850	Open in IMG/M
3300029620\|Ga0245130_124698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1337	Open in IMG/M
3300029702\|Ga0245265_112580	Not Available	1817	Open in IMG/M
3300029705\|Ga0224414_10868180	Not Available	1114	Open in IMG/M
3300029735\|Ga0245259_100146	All Organisms → cellular organisms → Bacteria	109354	Open in IMG/M
3300029857\|Ga0245297_1000249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	100588	Open in IMG/M
3300029859\|Ga0245304_101308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	28649	Open in IMG/M
3300029860\|Ga0245305_1004899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	6901	Open in IMG/M
3300031555\|Ga0318466_10738183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1823	Open in IMG/M
3300031555\|Ga0318466_11093807	Not Available	1326	Open in IMG/M
3300031555\|Ga0318466_11383529	Not Available	1094	Open in IMG/M
3300031555\|Ga0318466_12646093	Not Available	630	Open in IMG/M
3300031853\|Ga0326514_10707150	Not Available	890	Open in IMG/M
3300031994\|Ga0310691_10485774	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300031998\|Ga0310786_10173851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2482	Open in IMG/M
3300031998\|Ga0310786_10496704	Not Available	1381	Open in IMG/M
3300032167\|Ga0224413_10561694	Not Available	1686	Open in IMG/M
3300032167\|Ga0224413_10695417	Not Available	1427	Open in IMG/M
7000000433\|SRS050752_LANL_scaffold_42286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	688	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	99.21%
Environmental	Environmental	0.79%

Habitat	Taxonomy	Distribution
Mammals	Host-Associated → Mammals	73.81%
Human	Host-Associated → Human	22.22%
Arthropoda	Host-Associated → Arthropoda	3.17%
Aquatic	Environmental → Aquatic	0.79%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Mammals → Digestive System	73.81%
Digestive System	Host-Associated → Human → Digestive System	22.22%
Digestive System	Host-Associated → Arthropoda → Digestive System	3.17%
Freshwater	Environmental → Aquatic → Freshwater	0.79%

Habitat	Taxonomy	Distribution
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	51.59%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	21.43%
Foregut	Host-Associated → Mammals → Digestive System → Foregut	19.05%
Unclassified	Host-Associated → Mammals → Digestive System → Unclassified	3.17%
Midgut	Host-Associated → Arthropoda → Digestive System → Midgut	2.38%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Unclassified	Host-Associated → Human → Digestive System → Unclassified	0.79%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.79%

Habitat	Taxonomy	Distribution
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	49.21%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	21.43%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	19.05%
Unclassified	Host-Associated → Mammals → Digestive System → Unclassified → Unclassified	3.17%
Unclassified	Host-Associated → Arthropoda → Digestive System → Midgut → Unclassified	2.38%
Cecum	Host-Associated → Mammals → Digestive System → Large Intestine → Cecum	2.38%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Unclassified	Host-Associated → Human → Digestive System → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Goat Feces	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Goat Feces	46.83%
Human Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal	13.49%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	11.11%
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	5.56%
Human	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human	3.17%
Mouse Feces	Host-Associated → Mammals → Digestive System → Unclassified → Unclassified → Mouse Feces	3.17%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.38%
Passalidae Beetle Gut	Host-Associated → Arthropoda → Digestive System → Midgut → Unclassified → Passalidae Beetle Gut	2.38%
Ictidomys Tridecemlineatus Cecum	Host-Associated → Mammals → Digestive System → Large Intestine → Cecum → Ictidomys Tridecemlineatus Cecum	2.38%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal	1.59%
Moose Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Moose Rumen	1.59%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.79%
Human Feces	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Feces	0.79%
Human Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Host-Associated	0.79%
Human Gut	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Gut	0.79%
Human Gut	Host-Associated → Human → Digestive System → Unclassified → Unclassified → Human Gut	0.79%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.79%
Asian Elephant Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Asian Elephant Fecal	0.79%
Camel Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen	0.79%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2149837016	Human fecal microbial communities from the University of Arizona (HMP) - Ef2	Host-Associated	Open in IMG/M
2149837022	Human fecal microbial communities from the University of Arizona (HMP) - UAf2	Host-Associated	Open in IMG/M
2225789004	Passalidae beetle gut microbial communities from Costa Rica -Larvae (4BL+4ML+4MSL)	Host-Associated	Open in IMG/M
3300000114	Passalidae beetle gut microbial communities from Costa Rica -Larvae (3ML+3BL)	Host-Associated	Open in IMG/M
3300000278	Human fecal microbial communities from Cork, Ireland - EM209	Host-Associated	Open in IMG/M
3300000281	Human fecal microbial communities from Cork, Ireland - EM227	Host-Associated	Open in IMG/M
3300000285	Human fecal microbial communities from Cork, Ireland - EM251	Host-Associated	Open in IMG/M
3300001598	Elephant fecal microbiome from Asian Elephant in Hamburg Zoo, Germany	Host-Associated	Open in IMG/M
3300002597	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1	Host-Associated	Open in IMG/M
3300006045	Neocapritermes taracua P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Nt197 P3	Host-Associated	Open in IMG/M
3300006131	Intestinal microbial communities from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA - t1_692P_control - viral_metagenome	Host-Associated	Open in IMG/M
3300006138	Intestinal microbial communities from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA - t14_683M_control - microbial_metagenome	Host-Associated	Open in IMG/M
3300006145	Intestinal microbial communities from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA - t14_690P_inflammed - viral_metagenome	Host-Associated	Open in IMG/M
3300006217	Combined Assembly of all intestinal viral_metagenomes from Inflammed Rag1 mice from UTSWMC, Dallas, Texas, USA	Host-Associated	Open in IMG/M
3300006463	Human stool microbial communities from NIH, USA - visit 2 of subject 159207311	Host-Associated	Open in IMG/M
3300008622	Human stool microbial communities from NIH, USA - visit 1, subject 765640925 reassembly	Host-Associated	Open in IMG/M
3300008725	Human stool microbial communities from NIH, USA - visit 1, subject 763678604 reassembly	Host-Associated	Open in IMG/M
3300010163	Cecal microbial community of the 13 lined ground squirrel in Duluth, Minnesota, USA. Combined Assembly of 10 SPs	Host-Associated	Open in IMG/M
3300010998	Rumen fluid microbial communities from healthy moose, Palmer, Alaska - F02	Host-Associated	Open in IMG/M
3300011008	Rumen microbial communities from healthy moose, Palmer, Alaska. Combined Assembly of Gp0161001, Gp0160600, Gp0160599, Gp0160598	Host-Associated	Open in IMG/M
3300012979	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung B1 Day 1 Metagenome	Host-Associated	Open in IMG/M
3300014028	Human gut microbial communities from patients with symptomatic atherosclerosis - Chalmers University of Technology - 32	Host-Associated	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014808	Human fecal microbial communities from obese patients in Germany - AS66_3	Host-Associated	Open in IMG/M
3300014963	Human fecal microbial communities from elderly subjects during probiotic consumption in Boston, USA - meta_42827d56	Host-Associated	Open in IMG/M
3300018407	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Reed Canary Grass, Gen0, Rep 3, Penicillin and Streptomycin	Host-Associated	Open in IMG/M
3300018427	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Reed Canary Grass, Gen0, Rep 2, Chloramphenicol	Host-Associated	Open in IMG/M
3300018430	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Bagasse, Gen0, Rep 2, Chloramphenicol	Host-Associated	Open in IMG/M
3300018475	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 1	Host-Associated	Open in IMG/M
3300018493	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3	Host-Associated	Open in IMG/M
3300018494	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2	Host-Associated	Open in IMG/M
3300018495	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 2	Host-Associated	Open in IMG/M
3300018878	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1	Host-Associated	Open in IMG/M
3300019376	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Bagasse, Gen0, Rep 3, Penicillin and Streptomycin	Host-Associated	Open in IMG/M
3300019378	Goat fecal pellet enrichment culture fungal communities from Isla Vista, California, USA - Alfalfa, Gen0, Rep 2, Chloramphenicol	Host-Associated	Open in IMG/M
3300021254	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021255	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021256	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021387	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021399	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021400	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300022661	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2 (v2)	Host-Associated	Open in IMG/M
3300022753	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3 (v2)	Host-Associated	Open in IMG/M
3300023497	Human gut microbial communities from healthy child feces in Northridge, California, USA - CDI_92A	Host-Associated	Open in IMG/M
3300024268	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 2 Spades (v3)	Host-Associated	Open in IMG/M
3300024269	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 2 Spades (v3)	Host-Associated	Open in IMG/M
3300024272	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? diluted pellet 1 Spades (v3)	Host-Associated	Open in IMG/M
3300024303	Goat fecal pellet fungal communities from Santa Barbara, California, USA ? pellet 3 Spades (v3)	Host-Associated	Open in IMG/M
3300028797	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04	Host-Associated	Open in IMG/M
3300028805	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028886	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04	Host-Associated	Open in IMG/M
3300029103	Human fecal microbial communities from mother in Denmark - 179_M	Host-Associated	Open in IMG/M
3300029133	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI019845-88	Host-Associated	Open in IMG/M
3300029250	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021232-90	Host-Associated	Open in IMG/M
3300029256	Human fecal microbial communities from Rheumatoid Arthritis patients in China - SZAXPI021226-74	Host-Associated	Open in IMG/M
3300029305	Goal Fecal Pellet Co-assembly of all three pellet samples and three diluted pellet samples.	Host-Associated	Open in IMG/M
3300029439	Human feces microbial communities from a cholera patient in hospital, Baltimore, Maryland, USA - 075_4_30_stool_2	Host-Associated	Open in IMG/M
3300029573	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35515	Host-Associated	Open in IMG/M
3300029589	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35549	Host-Associated	Open in IMG/M
3300029619	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35991	Host-Associated	Open in IMG/M
3300029620	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_35980	Host-Associated	Open in IMG/M
3300029702	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37293	Host-Associated	Open in IMG/M
3300029705	Goat Fecal Pellets diluted in media	Host-Associated	Open in IMG/M
3300029735	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37222	Host-Associated	Open in IMG/M
3300029857	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37292	Host-Associated	Open in IMG/M
3300029859	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37336	Host-Associated	Open in IMG/M
3300029860	Human fecal microbial communities from twins in the TwinsUK registry in London, United Kingdom - YSZC12003_37337	Host-Associated	Open in IMG/M
3300031555	Goal Fecal Pellet Co-assembly of all three pellet samples and three diluted pellet samples.(v2)	Host-Associated	Open in IMG/M
3300031853	Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518	Host-Associated	Open in IMG/M
3300031994	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300031998	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)	Host-Associated	Open in IMG/M
3300032167	Three Goat Fecal Pellets	Host-Associated	Open in IMG/M
7000000433	Human stool microbial communities from NIH, USA - visit 1, subject 765640925	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
STU_0031.00000480	2149837016	Human Fecal	MPEESRDCGCGRNNNCLSNLFGGCGCGDSSILFFIIIFLLLFCNCGCNR
STU_0178.00000800	2149837022	Human Fecal	MPEESRDCGCGRNNGCGCLGNLFGGCGCGDSSILFFIIIFLLLFCNCGGNR
2227958697	2225789004	Passalidae Beetle Gut	MADDLRGCGCGCDNNNGLLGGLFGGCGDNSLLFFIIVFLLLFTNNGR
IMNBL3_10000003202	3300000114	Passalidae Beetle Gut	MQEDRNCGCSCNNGGILNGMFGCGGDTEILFFIIIFLLLFTNFGCGCGRG*
IMNBL3_100005865	3300000114	Passalidae Beetle Gut	MQEEVRGLGSCGCNNGCNNGILGGLFNGCGSNSTVLFFIIIFLLLFTDFGCGCNR*
EM209_106950714	3300000278	Human Fecal	GCGRNNGCGCLGNLFGGCGCGDSSILFFIIIFLLLFCNCGGNR*
EM227_100016026	3300000281	Human Fecal	MQDEVRDCSCCNNCNQGGLFGNLFGGCNNDSTILFFIIIFLLLFTNFGCGCGR*
EM227_10006736	3300000281	Human Fecal	MPEESRDCGCGRNNNCLSNLFGGCGCGDSSILFFIIIFLLLFCNCGCNR*
EM251_10040562	3300000285	Human Fecal	MPEESRDCGCGRNNGCGCLGNLFGGCGCGDSSILFFIIIFLLLFCNCGGNR*
EMG_1000022216	3300001598	Asian Elephant Fecal	MPDERACGCGCNNGGILGGCGGNDCSILFFIIIFLLLFTNCGCGCGCGR*
DRAFT_102168852	3300002597	Camel Rumen	MPDEGRNCGCGCGNNGILGGLFGGNGCNSEILFFIIVFLLLFTNCGCGRN*
Ga0082212_101586531	3300006045	Termite Gut	EFNMPEEQARCNCNNEGFLGNLFGGNSEILFFIIVFLLLFTDFGCCFRR*
Ga0080692_10101881	3300006131	Mouse Feces	NNSCGCNSGCGCNNGGFLSNLFGGCGCGDSTILFFIIIFLLLFTNCGCCNR*
Ga0080701_100057724	3300006138	Mouse Feces	VNIHSILYENLKEVDIMPEEQRNCGCNQNNNNGCGCCGVLGNLFGGNGCCGDSEILFFIIIFLLLFTNFGCCGR*
Ga0080708_10084974	3300006145	Mouse Feces	MQEEVRNCGCGCGCNNGGFLNGLFGGCGCGCDSEILFFIIIFLLLFTSFGNGCGCGCGR*
Ga0081461_11891631	3300006217	Mouse Feces	MDETRNCGCGCGCGNNNGCLSGLFGGCGDSEILFFIIIFLLLFTNCGC
Ga0100176_100059734	3300006463	Human	MPDERNCGCGCNNGMFGGCGGDDCSILFFIIIFLLLFTNCGCGNRGCCN*
Ga0111363_1280262	3300008622	Human	MISYKIKRREKNMPEEGRNCGCNNNGGFLNGLFGGCGCDSEILFFIIIFLLLFTNFGCGCQR*
Ga0115670_10545812	3300008725	Human	QDEVRDCSCCNNCNQGGLFGNLFGGCNNDSTILFFIIIFLLLFTNFGCGCGR*
Ga0136175_1000759512	3300010163	Ictidomys Tridecemlineatus Cecum	MQEEIRGCGCDCGNNCNNGGFLGNLFGGCGCGDNSILFFILIFLLLFTNCGCCNR*
Ga0136175_100102586	3300010163	Ictidomys Tridecemlineatus Cecum	MQEEVRNCGCGCNNNGGFLNNLFGGCGCGDSEILFFIIIFLLLFTNFGCGCGCGRSCN*
Ga0136175_104720102	3300010163	Ictidomys Tridecemlineatus Cecum	MQDERNCGCNNGPLGGLLNGCGCGCGDSQILFFIIIFLLLFTNCGCNGGRGCCN*
Ga0139311_100451915	3300010998	Moose Rumen	MPEESRNFGGGCCNNNGPLNGIFGGCDCTVLFFIIVFLLLFTNFGCGCDGRG*
Ga0139362_15620822	3300011008	Moose Rumen	MPEEGRNCGCGCGNNGILGNMFGDGCNSEILFFIIVFLLLFTNCGCCRN*
Ga0123348_100815702	3300012979	Fecal	MQEEVRNCGCGCGSNNGGILNGLFGGCGCDSEILFFIIIFLLLFTSFGNNCGCGRSCC*
Ga0123348_104769491	3300012979	Fecal	KEVAIMPEDQRNCGCVPTRNDGGCGGLGNLFGRNNNCGCDSEILFFIIIFLLLFTNFGCCGR*
Ga0117810_10280041	3300014028	Human Gut	MISYKIKRREKDMPEEGRNCGCGCNNNGGFLNGLFGGCGCDSEILFFIIIFLLLFTNFGCGCQR*
Ga0172378_101214981	3300014203	Groundwater	MQEEARGCCNNGGILGGMFGNCGCGGDSEILFFIIIFLLLFTNCGCGCGRGCCK*
Ga0134443_100035823	3300014808	Human Fecal	MPEESRNCGCGRNNNCLSNLFGGCGCGDSSILFFIIIFLLLFCNCGCNR*
Ga0134523_100124557	3300014963	Human Fecal	MPEEGRNCGCGCNNNNNGGFLNGIFGGCCGDNTEILFFIIIFLLLFTNFGCGCQRGC*
Ga0187900_10644272	3300018407	Goat Feces	MPDDGRNCGCGCGCNNNGFLGNLFGGDGCNSEILFFIIVFLLLFSNNGCGRGCR
Ga0187903_100692812	3300018427	Goat Feces	MQDEVRDCGCGCGNNGGFLNNVLGGCGCNDSTILFFIIIFLLLFTNCGCNGGRGCCN
Ga0187903_104341492	3300018427	Goat Feces	MPEEGRNCGCGCGCGNNGFLGGLFSGNGCNSEILFFIIVFLLLFTNCGSGRGCN
Ga0187903_109880561	3300018427	Goat Feces	MQEELRNCGCNDNCGCGNNGGFLGNLFRGSGCGNDSEILFFIIIFLLLSTNFGCGCGNGRGC
Ga0187903_109925432	3300018427	Goat Feces	MQDEVRECGCSCGNNNGGFLNNVLGGCGCNDSTILFFIIIFLLLFTNCG
Ga0187903_110740582	3300018427	Goat Feces	MPDERNCGCGCGNNNGGLFGGCGDDCSILFFIIIFLLLFTNCGCNRGCGC
Ga0187903_112302991	3300018427	Goat Feces	MQDEVRDCGCGCGNNGGFLNNVLGGCGCGDSTILFFIIIFLLLFTNCGCNGGRGCC
Ga0187902_103118622	3300018430	Goat Feces	MPDERNCGCGCNNNGIGGLFGGCGNDCSILFFIIIFLLLFTNCGCGSGRGCC
Ga0187902_108954012	3300018430	Goat Feces	MPDERNCGCGCGCGNNGNNAGLFGGCGDDCSILFFIIIFLLLFTNCGCNRGCGF
Ga0187907_108358452	3300018475	Goat Feces	MQEENRNCCCENNGGLFGGLFGGNCGNSGNCSELLFFIIIFLLLFNNCGCGRN
Ga0187907_114290141	3300018475	Goat Feces	MQDELRDCGCGCGNNNGGFLNNVLGGCGCGDSTILFFIIIF
Ga0187907_119129562	3300018475	Goat Feces	MPDNNVGCGCPSEPRNCGNGFGLFNGCGCDSEILFFIIIFLLLFTNFGCCGCGR
Ga0187909_116471341	3300018493	Goat Feces	VDVAYGCGNNNGGLFGGCGDDCSILFFIIIFLLLFTNCGCNRGCGC
Ga0187909_117746141	3300018493	Goat Feces	MQDEVRECGCSCGNNNGGFLNNVLGGCGCNDSTILFFIIIFLLLFTNCGCNGGRGCC
Ga0187909_120616731	3300018493	Goat Feces	MQEENRNCGCGCNNNGGLLSGLFGGNGCCGDNSILFFILIFLLLFTNCGCNR
Ga0187911_109795171	3300018494	Goat Feces	MQDELRDCGCGCGNNNGGFLNNVLGGCGCGDSTILFFIIIFLLLFTN
Ga0187911_112297242	3300018494	Goat Feces	YKNIKGGSNMQEENRNCGCGCNNNGGLLSGLFGGNGCCGDNSILFFILIFLLLFTNCGCN
Ga0187911_114874862	3300018494	Goat Feces	MQEELRNCGCNDNCGCGNNGGFLGNLFRGSGCGNDSEILFFIIIFLLLFTNFGCGCGCGRSC
Ga0187911_115473491	3300018494	Goat Feces	MQEEVRDCGCGCGNNNGGFLNNVLGGCGCGDSTILFFIIIFLLL
Ga0187911_116166062	3300018494	Goat Feces	QMPDNNVGCGCPSESRNCGNGFGLFNGCGCDSEILFFIIIFLLLFTNFGCCGCGR
Ga0187908_104475782	3300018495	Goat Feces	MSDEVRCGCGCDNNNGIFGGLFGGNGCGCDSQILFFIIIFLLLFTNCGCGCNR
Ga0187908_118721341	3300018495	Goat Feces	MEESRNCGCGCNNGYGLGNMFGCGDSEILFFIILFLLLFTNCGCGCGRGCC
Ga0187910_108014901	3300018878	Goat Feces	MPEDRNCGCGCGNGLGNIFGGNGGCDCTILFFIIIFLLLFTNCGCNN
Ga0187910_110225371	3300018878	Goat Feces	MQEEVRNCGCNNCGCGCNNGGFFNGLFGGCGCDSEILFFIIIFLLLFTNYG
Ga0187910_115276042	3300018878	Goat Feces	MQEEVRNCGCGCNNNNGCGFLGNLFGGNGCGCGDNSILFFILIFLLLFTNCGCNR
Ga0187899_106010011	3300019376	Goat Feces	MSDEVRGCGCDNNGFLGNLFGGNGCGCDSQILFFIIIFLLLFTNCGCCNR
Ga0187901_102177051	3300019378	Goat Feces	MQDEVRDCGCGCGNNGGFLNNVLGGCGCNDSTILFFIIIF
Ga0223824_1000052310	3300021254	Cattle And Sheep Rumen	MQDDMRNCGCNNNNGILGSMFNCGDNSEILFFIIVFLLLFTNFGGGR
Ga0223824_100493633	3300021254	Cattle And Sheep Rumen	MPEEGRSCGCGCGNNGILGGMFGGDGCNSEILFFIIVFLLLFTNCGCCGRN
Ga0223825_104513371	3300021255	Cattle And Sheep Rumen	MPEEGRNCGCGCGNNNGILGGLFGGDGCNSEILFFIIVFLLLFTNCGCCRN
Ga0223826_104027542	3300021256	Cattle And Sheep Rumen	MPDNNGMMGEERYCGNNNNGGLFGGCCGNSEILFFIIIFLLLFTNFGCCGCNN
Ga0223845_106085582	3300021387	Cattle And Sheep Rumen	MQDEIRNCGCNNGFLGGMFNGCGCDSEILFFIIIFLLLFTNFGSCGCCGRN
Ga0223845_1226650710	3300021387	Cattle And Sheep Rumen	MPDERGCTYNNGGLFGGCGNDCSILFFIIIFLLLFTNCGCGCGCGR
Ga0224415_1000064633	3300021399	Cattle And Sheep Rumen	MPEEGRNCGCGCGNNGILGGLFGGDGCCNSEILFFIIVFLLLFTNCGCGCGRN
Ga0224415_1000074133	3300021399	Cattle And Sheep Rumen	MPEEGRNCGCGNNGILGGIFGGDGCNSEILFFIIVFLLLFTNCGCGRN
Ga0224415_100131192	3300021399	Cattle And Sheep Rumen	MPEEGRNCGCGCGNNNGVLGGLFGGDGCNSEILFFIIVFLLLFTNCGCGRN
Ga0224422_101517431	3300021400	Cattle And Sheep Rumen	MPEEGRNCGCGCGNNGVLGGLFGRNDGCCNSEILFFIIVFLLLFTNCGCGCGRN
Ga0224422_116425981	3300021400	Cattle And Sheep Rumen	MPDERNCGCGCNNNGLGGIFDNDCSILFFIIIFLLLFTNCGCGCNRGCGM
Ga0224422_116962844	3300021400	Cattle And Sheep Rumen	MPEEGRSCGCGNNGILGGMFNGDGCCNSEILFFIIIFLLLFTNFGCCGRN
Ga0224422_119432712	3300021400	Cattle And Sheep Rumen	MPEEGRNCGCGCGNNNGVLGGLFGGDGCCNSEILFFIIVFLLLFTNCGCCGRN
Ga0224422_1254621610	3300021400	Cattle And Sheep Rumen	MPEEGRSCGCGCGNNGILGGMFGGDGCNSEILFFIIVFLLLFTNCGCGGRN
Ga0216339_103276552	3300022661	Goat Feces	MQDEVRECGCSCGNNNGGFLNNVLGGCGCNDSTILFFIIIFLLLFTNC
Ga0216341_107195981	3300022753	Goat Feces	MQEENRNCCCENNGGLFGGLFGGNCGNSGNCSELLFFIIIFLLLFNNC
Ga0257058_1045823	3300023497	Human Gut	MPEEGRNCGCNNNGGFLNGLFGGCGCDSEILFFIIIFLLLFTNFGCGCQR
Ga0257090_120667162	3300024268	Goat Feces	MPEERNCGCNNGGFFGGGCGDSEILFFIIIFLLLFTNCGCGGRNC
Ga0257076_100654133	3300024269	Goat Feces	MQDEVRDCGCGCGNNGGFLNNVLGGCGCNDSTILFFIIIFLLLFTNCGCNGGRGCC
Ga0257076_105105232	3300024269	Goat Feces	MQDEVRECGCSCGNNNGGFLNNVLGGCGCNDSTILFFIIIFLLLFTNCGCNV
Ga0257076_106354032	3300024269	Goat Feces	MPDERNCGCGCGNNNGGLFGGCGDDCSILFFIIIFLLLFTNCGCNRGC
Ga0257076_115987211	3300024269	Goat Feces	MQEEVRDCGCGCGNNNGGFLNNVLGGCGCGDSTILFFIIIFLLLFTNCGCNGGRGCC
Ga0257077_117304582	3300024272	Goat Feces	KGGSNMQEENRNCGCGCNNNGGLLSGLFGGNGCCGDNSILFFILIFLLLFTNCGCNR
Ga0257089_108277342	3300024303	Goat Feces	MEESRNCGCGCNNGYGLGNMFGCGDSEILFFIIIFLLLFTNCGCGCGRGCC
Ga0257089_112137061	3300024303	Goat Feces	MSDEVRCGCGCDNNNGIFGGLFGGNGCGCDSQILFFIIIFLLLFTNCGC
Ga0257089_115419401	3300024303	Goat Feces	MPDERNCGCGCGCGSNNGGLFGGCGDDCSILFFIIIFLLLFTNCGCNRGCGC
Ga0265301_105159272	3300028797	Rumen	MPDEMRNCGCNNNGILGGLFNGNCCGGNSEILFFIIVFLLLFTNFGGYRA
Ga0247608_107802031	3300028805	Rumen	MPEEGRNCGCGCGCGNNGILGGMFGGDGCNSEILFFIIVFLLLFTNCGCCGRN
Ga0256407_102231891	3300028886	Rumen	MPEEQRNCGCGCNSNNGFLGNLFGGCGGDTEILFFIIVFLLLFTNFGCGCGCSR
Ga0169220_1029353	3300029103	Human Host-Associated	MPDERNCGCGCNNGMFGGCGGDDCSILFFIIIFLLLFTNCGCGNRGCCN
Ga0168787_1207693	3300029133	Host-Associated	MQEEVRACGCDGNNNNCCGGGFLSNLFGGNGCGCGDNSLLFFILIFLLLFNNCGCCNR
Ga0167474_100073021	3300029250	Host-Associated	MPEEGRNCGCGCNNNGGFLNGLFGGCGCDSEILFFIIIFLLLFTNFGCGCQR
Ga0168827_1021341	3300029256	Host-Associated	MEENRNCGCNNGGLLNGLFGGCGCGDDSTILFFIIIFLLLFTNFGCGCGR
Ga0307249_101364292	3300029305	Goat Feces	MQDEVRDCGCGCGNNNGGFLNNVLGGCGCNDSTILFFIIIFLLLFTNCGCNGGRGCC
Ga0307249_101463401	3300029305	Goat Feces	MQDELRDCGCGCGNNNGGFLNNVLGGCGCGDSTILFFIIIFLLLFTNCGCNGGRGCC
Ga0307249_103077034	3300029305	Goat Feces	MQMPDNNVGCGCPSESRNCGNGFGLFNGCGCDSEILFFIIIFLLLFTNFGCCGCGR
Ga0307249_103629663	3300029305	Goat Feces	MQDNSLNMGCGCPSEPRNCGNGFGLFNGNGCDSEILFFIIIFLLLFTNFGCCGCSR
Ga0307249_104166353	3300029305	Goat Feces	MQEERNCCFQNNDNCGCSPFGGLFGGNGCGCDSQILFFIIIFLLLFTNFGCGCGRGCCN
Ga0307249_104522562	3300029305	Goat Feces	MQDEMRNCGCNDNCGCGYGNNGILGNLFRGCGCGNDSEILFFIIIFLLLFTNFGCGCGCGRSC
Ga0307249_104673432	3300029305	Goat Feces	MQEEIRNCGCNDNCGYACGCGNNGGFLGNIFRGSTRGGNDSEILFFIIIFLLLFTNFGCGCGNGRSC
Ga0307249_106079472	3300029305	Goat Feces	MQEEVRGCGCDCNNNCNNGGLLSNLFGGNGCSSSDNSILFFILIFLLLFTNCGCK
Ga0307249_107322342	3300029305	Goat Feces	CGCGCNNGGLGGLFNGGCGCGDSEIIFFIIIFLLLFTNCGCGGGRGCN
Ga0307249_113169972	3300029305	Goat Feces	MPEESRDCGCGCNNCCNNGGVLSNLFGGCGDNNILFFIIIFLLLFTNCGCGCNR
Ga0307249_113526602	3300029305	Goat Feces	MPDERNCGCGCGANNGLFGGCGDDCSILFFIIIFLLLFTNCGCNRGCGC
Ga0307249_114646442	3300029305	Goat Feces	MQDEVRDCGCGCGNNNGGFLNNVLGGCGCGDSTILFFIIIFLLLFTNCGCGCGRGCC
Ga0307249_115449491	3300029305	Goat Feces	MMKGGRNMPEDNRNCGCNNNGGLFGGLFGGNGCGCNDNSILFFIIIFLLLFTNCGCCNR
Ga0307249_128805971	3300029305	Goat Feces	MQDEVRDCGCGCGNNNGGFLNNVLGGCGDSTILFFIIIFLLLFTNCGCNGGRGCC
Ga0243904_10403281	3300029439	Human Feces	YIENLKEENFMPEESRDCGCGRNNNCLSNLFGGCGCGDSSILFFIIIFLLLFCNCGCNR
Ga0245101_10060030	3300029573	Human Fecal	MPEESRDCGYGRNNGCGCLGNLFGGCGCGDSSILFFIIIFLLLFCNCGGNR
Ga0245106_1030608	3300029589	Human Fecal	MPEEGRNCGCGCNNNNNGGFLNGIFGGCCGDNTEILFFIIIFLLLFTNFGCGCQRGC
Ga0245131_100003170	3300029619	Human Fecal	MKGVEIMQEEVRGCGCDNNGGFLSNLFGRNGCGCGDNSILFFILIFLILFTNCGCGNR
Ga0245130_1246983	3300029620	Human Fecal	MPEESRDCGCGRNNGCGLNNLFGGCGCGDSSILFFIIIFLLLFCNCGCNR
Ga0245265_1125803	3300029702	Human Fecal	GCNNGGFLGNLFGGCGCGDNSMLFFILIFLILFCGCGNSCCNR
Ga0224414_108681802	3300029705	Goat Feces	MQEEVRDCGCGCGNNNGGFLNNVLGGCGCGDSTILFFIIIFLLLFTSCGCNGGRGCC
Ga0245259_10014612	3300029735	Human Fecal	MPEERDCGCQCNNNGRCGGLFNNLFNGCGCGNDNTILFFIIVFLLLFTNFGCGCNR
Ga0245297_100024978	3300029857	Human Fecal	MPEEGRNCGCGCGCGNNGILGGIFNGDGCNSEILFFIIVFLLLFTNCGCCGRN
Ga0245304_10130815	3300029859	Human Fecal	MPEESRNCGCGRNNNCLSNLFGGCGCGDSSILFFIIIFLLLFCNCGCNR
Ga0245305_10048997	3300029860	Human Fecal	MEENRNCGNCGCNNGGLFNGLFGGCGCGDDSTILFFIIIFLLLFTNFGCCGCGR
Ga0318466_107381832	3300031555	Goat Feces	MKYLKCKRGGKNMQEEIRNCGCNDNCGYACGCGNNGGFLGNIFRGSTRGGNDSEILFFIIIFLLLFTNFGCGCGNGRSC
Ga0318466_110938071	3300031555	Goat Feces	MPEDNRNCGCNNNGGLFGGLFGGNGCGCNDNSILFFILIFLLLFTNCGCCNR
Ga0318466_113835292	3300031555	Goat Feces	MPDERNCGCGCGCGNNNGGLFGGSGDDCSILFFIIIFLLLFTNCGCNRGCGC
Ga0318466_126460932	3300031555	Goat Feces	MQEEVRGCGCDCNNNCNNNGGFLGSLFGGNNCGCGDNSILFFILIFLLLFTNCGCSNR
Ga0326514_107071502	3300031853	Rumen	MPDEGRSCGCDCGCGNNNGILGGLFGGNGGCNSEILFFIIVFLLLFTNCGCGRN
Ga0310691_104857741	3300031994	Rumen	MPEDGRSCGCDCGRSCGCGNNNGILGNLFNGNGCCNSEILFFIIVFLLLFTNNN
Ga0310786_101738512	3300031998	Rumen	MQDEVRNCGCQNNGILGGMFGGNNGCGCCDTEILFFILIFLLLFTNFGRN
Ga0310786_104967043	3300031998	Rumen	MPDEGRNCGCGCGCGNNGILGGLFGGNGCNSEILFFIIVFLLLFTNCGCGCGRN
Ga0224413_105616941	3300032167	Goat Feces	MPEERNCGCNNGGFFGGSCGDSEILFFIIIFLLLFTNCGCGGRNC
Ga0224413_106954173	3300032167	Goat Feces	MQDNSLNMGCGCPSEPRNCGNGFGLFNGCGCDSEILFFIIIFLLLFTNFGCCGCGR
SRS050752_LANL_scaffold_42286__gene_81861	7000000433	Human	MISYKIKRREKNMPEEGRNCGCNNNGGFLNGLFGGCGCDSEILFFIIIFLLLFTNFGCGCQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066905

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences