Metagenome Family F067455

Basic Information
Family ID	F067455
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	48 residues
Representative Sequence	QNLINDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLE
Number of Associated Samples	4
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	2
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules (100.000 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (100.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.30% β-sheet: 0.00% Coil/Unstructured: 50.70%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00078	RVT_1	2.40
PF00665	rve	1.60
PF07727	RVT_2	1.60
PF02689	Herpes_Helicase	0.80
PF01453	B_lectin	0.80
PF00646	F-box	0.80
PF03732	Retrotrans_gag	0.80
PF13966	zf-RVT	0.80
PF03078	ATHILA	0.80
PF14111	DUF4283	0.80
PF13976	gag_pre-integrs	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.60
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.60
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.60
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.60

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Visualization

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Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Root Nodules	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules	100.00%

Visualization

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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006946	Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG	Host-Associated	Open in IMG/M
3300006948	Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15	Host-Associated	Open in IMG/M
3300027111	Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes)	Host-Associated	Open in IMG/M
3300027666	Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0079104_10623151	3300006946	Root Nodules	QIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLE*
Ga0079104_11156102	3300006946	Root Nodules	MQIKMIFVQNLTNDSCKQIEKTQGQIVGTENGFFVGKDQNTLLYDFMQKLKGLK*
Ga0099826_1000791010	3300006948	Root Nodules	MQTKMFFKQNLTNDSCKQIEKTQGQTVGTKMGSIAGNDQNTLLYDFMQKI*
Ga0099826_1000939015	3300006948	Root Nodules	MIFVQNLINDSCKQIEKTQGQIVGTENGSFAGNDQNTLLYGLMQKFKRLK*
Ga0099826_100252066	3300006948	Root Nodules	MQTKMVFKQNLINDSCKQIEKTQGPIVGTKMGSFAGNDQNTLLYDFMQKLKDRNSNVCS*
Ga0099826_100291401	3300006948	Root Nodules	QSLIYDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLKRQKQ*
Ga0099826_100392024	3300006948	Root Nodules	FVQNLINDSCKQIEKIQGQIVGTKMGSIAGNDQNTLLYDFM*
Ga0099826_100394952	3300006948	Root Nodules	MIFVQSLIYDSCKQTEKTQGQIAGTKMGSFVGNDQNTLLYDLMQKI*
Ga0099826_100491586	3300006948	Root Nodules	LINDSCRQVEKTQGQIVGTKNGSTAGNDQNALLCDFMQKMME*
Ga0099826_100610431	3300006948	Root Nodules	MIFGQNLINDSCRQVEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKIGIKC
Ga0099826_100773833	3300006948	Root Nodules	MIFKQNLIYDSCKQTEKTQGQIVGTKMDSFVGNDQNTLWYDFMKKFKRLKR*
Ga0099826_100915982	3300006948	Root Nodules	KKTQGQIVGTKMGSFVGNDQDTLLYDFMQKIGIKC*
Ga0099826_101219522	3300006948	Root Nodules	MIFVQNLIKDLCKTVEKTQGQIVGTENGSFVGNDQNTLLYDFMQKFKRLKQ*
Ga0099826_101489271	3300006948	Root Nodules	DAKLNDFVQNLIKDSCKQIEKTQGQIVGTKMGSTAGNDQNTHLYDLVQKF*
Ga0099826_101555852	3300006948	Root Nodules	LIDDLCRQVKETHGQIVGTKMGSFVGNDQNTLLYDFMQK
Ga0099826_101683053	3300006948	Root Nodules	MIFVQNLINDSCRQIEKTQGQTVGAKMSSFVGNDQNTLLYDFMQKLE*
Ga0099826_101733313	3300006948	Root Nodules	LINDSCRQVEKTQVQIVGTKMGSFVGNDQNTLLYDFMQKILE*
Ga0099826_101764453	3300006948	Root Nodules	LIKDLCRPVEKTQGQIAGTEMGSFVGNDQNTLLYDFMQKFRRL
Ga0099826_101771411	3300006948	Root Nodules	LIDDLCRQVKKTQGQIVGTKMGSFVGNDQDTLLYDFMQKIGIKC*
Ga0099826_101843451	3300006948	Root Nodules	PLGTKRLKLTQMQNQDDFVQNLINDSCRQIKKTQGQIARIEMGSFVGNDHNTLLYDYM*
Ga0099826_101843952	3300006948	Root Nodules	MQTKMIFEQNLTNDSCKQIEKTQGPIVGTKMGSTAGNDQNTLLYDFMQKFKRLKQ*
Ga0099826_101857643	3300006948	Root Nodules	LINDSCRQIKKTQGQIARTKMGSFVGNDHNTLLYDFM*
Ga0099826_101876961	3300006948	Root Nodules	KGLCRQTEKTQGQIVGTENGFFVGNDQNTLLYDFMQKFKRLKQ*
Ga0099826_101986612	3300006948	Root Nodules	MRLKIDFVQILINDLCKQVEKTQGQIAGTKKSSFVGNDQNTLLYDFMQKFKRLKK*
Ga0099826_102129811	3300006948	Root Nodules	LFDDSCRQVKKPQGQIVGTKVGSFVGNDQNTLLYDFMQKKILE*
Ga0099826_102167231	3300006948	Root Nodules	MQTKMIFKQNLTNDSCKQIEKTQGQIVGTKTGSFVGNDQNTLLYDLMQKFKRQRQ*
Ga0099826_102186281	3300006948	Root Nodules	MKDQNAPGDQNDSDSRCKTKMIFGQNLINNSCRQVEKTQGQIVGTKMGSCIGNDQNTLLYDFMQKLE*
Ga0099826_102385971	3300006948	Root Nodules	MQC*DNFFGQNLIDDLCRQVEKTRRQIVGTKMGSSVGNDQNTLLYD
Ga0099826_102833352	3300006948	Root Nodules	MIFGQNLNNDSCRQVEKTQGQIVGTKMGSFVGNDQNTLSYDFMQKKLV*
Ga0099826_102893161	3300006948	Root Nodules	NLINDSCKQNEKTQGQIVGTKTGSFVGNDQNTLLYDFMQKFKRLRQ*
Ga0099826_102901332	3300006948	Root Nodules	MIFVQSLIYDSCKQIEKAQGQIARTKMGSFVGNDQNTLLYDFM*
Ga0099826_103104802	3300006948	Root Nodules	MQTKMIFKQNLTNDLCKQIEKTQGQIVGTKMGSIAGNGQNTLLYDFMQKFKRLKQ*
Ga0099826_103125721	3300006948	Root Nodules	FVQNLINDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKIKRQKQ*
Ga0099826_103177251	3300006948	Root Nodules	MIFFGQNLIDDLCRQVEKTRRQIVGTKMGSSVGNDQNTLLYD
Ga0099826_103263914	3300006948	Root Nodules	MIFVQNLINDSCRQIEKTQGQIVGTRMSSFVGNDQNTLLYDFMQKLE*
Ga0099826_103328011	3300006948	Root Nodules	MQTQVIFVQNLIYDPCKQIEKTQGQIVGTKMSSFVGNDQNTLLYDFMQK*
Ga0099826_103362111	3300006948	Root Nodules	MIFWTKLIDDLCRPIEKTQRQIVRTKMGSFVGNDQNTLLCDFMQKMME*
Ga0099826_103402861	3300006948	Root Nodules	LINDLCIQVEKTQGQIVGTKMGSFVGNDQNTFLYDCMRKIG
Ga0099826_103430901	3300006948	Root Nodules	LVQNLINGLRKQTEKTQGQIAGTKMGSFVGNDQNTLLYDFMQKFKRLKQ*
Ga0099826_103656691	3300006948	Root Nodules	MIFGPKLIDDSCRQVKKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLE*
Ga0099826_103742691	3300006948	Root Nodules	MIFKQNLTHDLYRQVEKTQRQMQGFKMGSIAGNDQNALLYDFMQKFGINC*
Ga0099826_103745101	3300006948	Root Nodules	MIFVQNLINDSCKQIEKAQGQIVGTKMGSFIGNDQNTLLYDFMQKLKDRNSNVCS*STVENTVNL
Ga0099826_103764011	3300006948	Root Nodules	LIDVLCRRVEKTQGQIVGTKMGSCVGNDQNTLLYDFMQKKLE*
Ga0099826_103822682	3300006948	Root Nodules	MIFVQNLINDSCRQIEKTQGQIQGLKMGSFVGNDQNTLLYDLMQKFKRLKQ*
Ga0099826_103862151	3300006948	Root Nodules	MIFGQNLINDSCRQVEKTQGQIAGTKMGSFVGNDQNTLLYDFMQKMME*
Ga0099826_103877972	3300006948	Root Nodules	MIFVQNLINDSCKQIEKAQGQIVGTKMGSFAGNDQNALLYDFMQKLSDRNGNVCS*
Ga0099826_103947772	3300006948	Root Nodules	MQNKMIFVQNLINGLCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDLKQKFKRLKQ*
Ga0099826_104105952	3300006948	Root Nodules	MILVQNLIKDSCKQIEETQGQIVGTKMGSTAGNDQNTLLYDLVQKNLKD*
Ga0099826_104277751	3300006948	Root Nodules	LIDDLCRQVKKTQEQIVGTKMGSFVGNDQNTLLYDFMQKLE*
Ga0099826_104283532	3300006948	Root Nodules	MIFVQNLINDSCKPIEMTQGQIVGTKMGSFVGNDQNTLLYDFMQKLKDRNSNVCS*
Ga0099826_104298162	3300006948	Root Nodules	MIFVQNLINDSCRQVENTQGQIVGTKMGSFVGNDQNTLLYDFMQNLE*
Ga0099826_104380421	3300006948	Root Nodules	KFSSKNLTNDSCKQIEKTQGQIVGTKMGSIEGNDQNTLLYDFMQKLE
Ga0099826_104419362	3300006948	Root Nodules	LINDSYRQIEKTQGQIVGTKMGSIAGNDQHTLLICFYARIWNKMQEKNVK*
Ga0099826_104511491	3300006948	Root Nodules	NDSCKQIEKTQGRIVGTKMGSIAGNDQNTLLYDFMQKFKRPKQ*
Ga0099826_104558911	3300006948	Root Nodules	QNLINDLYRQIEDSETNVGTKMGSTAGNDQNTLLYVLMQ*
Ga0099826_104571142	3300006948	Root Nodules	MQTKMIFEQNLINDSCKQIEKTQGQIVGTKMGSIAGNDQNTLLYDFMQK
Ga0099826_104584131	3300006948	Root Nodules	LIKDLCRPVEKTQGQIVGTENGSFVGNDQNTLLYD
Ga0099826_104621041	3300006948	Root Nodules	MIFGQNLINDSCRQVEKTQGQIVGTKMGSTVGNDQNTLLCDFIQKEMME*
Ga0099826_104657512	3300006948	Root Nodules	MTFVQNLINDSCRQIEKTQGLIVGTKMGSFVGNDQNTLLYDFMQKLE*
Ga0099826_104742692	3300006948	Root Nodules	AKQDDFQQNLIKDLCKPVEKTQGQIVGTENGSFVGNDQNAFLYDFMQKFKRLKQ*
Ga0099826_104889642	3300006948	Root Nodules	MILGQNLINDVCRQVVKTQRQIVGTKMGSTAGNDQNTLLYDFIQ
Ga0099826_104895391	3300006948	Root Nodules	LINDSCRQVEKTQGQIVGTKMGSFVGNDQNTLLYDFMQQLE*
Ga0099826_104899843	3300006948	Root Nodules	MIFKQNLIKDLCKQVEKTQGQIVGTENGFFVGNDQNTLL
Ga0099826_105011912	3300006948	Root Nodules	VIFRQNLINDPCRQVAKTQRQIVGTKMGSSIGNDQDTLLYDFMQM*
Ga0099826_105065922	3300006948	Root Nodules	NDSCKQIEKTQGQIVGTKMGSIAGNDQNTLLYDSMQKFKRLKQ*
Ga0099826_105099781	3300006948	Root Nodules	LINDSCKQIEKTQGQIVGTKMGSIAGNDQNTLLYGFMQK*
Ga0099826_105184231	3300006948	Root Nodules	LIKDLCKQVEKTQGQIVGTENGSFVGNDQNTLLYDF
Ga0099826_105192591	3300006948	Root Nodules	MIFGQNLINDSCRPIEKTQGQTVGTKMGSTTGNDQNTLLCDFMQKMME*
Ga0099826_105294112	3300006948	Root Nodules	MQIKVIFVQNLINGSCKQIEKTQGQIAGTKMGSIVGNDQNTLLYVFMQKLRQKQ*
Ga0099826_105345782	3300006948	Root Nodules	MIFVQNLINDSCKQIDKTQGQIVGTKTGSVAGNDQNTLLYDFMQKFKRQRQ*
Ga0099826_105361181	3300006948	Root Nodules	MNFVQILIKDLCRPVEKTQGQIVGTENGSFVGNDQNTLLCDFMQK
Ga0099826_105407941	3300006948	Root Nodules	MQTQVVFVQNLIDDSCKQIEKTPGQIVGTKMGSFVGNDQNTLLYDFMQKLKD*
Ga0099826_105467191	3300006948	Root Nodules	LIDDLCRQVKETQGQIVGTKMGSFVGNDQNTLLYDFMQKLE*
Ga0099826_105503651	3300006948	Root Nodules	MIFDQNLTNDSCKRIEKTQGQTAGTKMGSIAGNDQNTLLYDFMQKFKRLK
Ga0099826_105520131	3300006948	Root Nodules	LINDSCKQIEKTQGQIVGTKTGSFVGNDQNTLLYVFMQKLRQKQ*
Ga0099826_105551511	3300006948	Root Nodules	MIFGQNLINDSCRQVEKTQGQIIGTKMGSFVGNDQNTLLYD
Ga0099826_105577091	3300006948	Root Nodules	LINDSCEQIDKTQGQIVGTKMGSFVGNDQNTLLYDVMQRLKDRDSNVCS*
Ga0099826_105710112	3300006948	Root Nodules	MQIKMIFVQNLTNDLCKQIDKTQGQIVGTKMGSFVGNDQNTLLYDLMQKLKD
Ga0099826_105758672	3300006948	Root Nodules	LIKDSKQQIEKTRGQIVRTKMGSFVGNDQNTLLYDFMQKLE*
Ga0099826_105787301	3300006948	Root Nodules	MIFGRNLINDSCRQVEKTEGQIVGTKMGSFVGNDQNTLLYDLMQKKLE*
Ga0099826_105914421	3300006948	Root Nodules	NDSDLRCKTKMIFGQNLINDSCRQVEKTQGQIVGTKMGSTTGNDQNTLLCDFMQKMME
Ga0099826_105918091	3300006948	Root Nodules	MIFGQNLIYDSCKQIEKTQGQIARTKMGSFVGNDQNTLLYDFMQKL
Ga0099826_105953461	3300006948	Root Nodules	VQNLTNDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLE*
Ga0209281_10627321	3300027111	Root Nodules	MIFGQNLINDSCRQVEKTQGQIVGTKMGSTAGNDQNTLLCDFMQKMME
Ga0209282_10186253	3300027666	Root Nodules	CKTKMIFVQNLINDSCRQVEKTQGQIVGTKMGSFVGNDQNTLLCDFMQKLE
Ga0209282_10204521	3300027666	Root Nodules	MIFVQNLINDSCKQIEKAQGQIVGTKMGSIAGNDQNTLLYDFMQKLKGLKQ
Ga0209282_10250441	3300027666	Root Nodules	MIFVQNLINDSSKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLKDRNSNACS
Ga0209282_10264171	3300027666	Root Nodules	DDSVQNLINDSCRQIEKTQGQIVGIKMASFVGNDQNTLLYDFMQKLE
Ga0209282_10305221	3300027666	Root Nodules	VQNLINDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLNDRNNNVCS
Ga0209282_10322353	3300027666	Root Nodules	MQTKMIFVQNLINYLCKQIEKTQGQIAGTTMGSFVGNDQNTLLYGLMQKFKRLK
Ga0209282_10383512	3300027666	Root Nodules	MQTKMIFVQNLINDSCKQVEKTQGQIVGTKMGSIAGNDQNTLLYDLMQKFKRLKQ
Ga0209282_10461423	3300027666	Root Nodules	MIFGQNLINDSCRQVEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKIGIKCR
Ga0209282_10645472	3300027666	Root Nodules	MIFVQNLINDSCKPIEKTQGQIAGTKMGSFVGNDQNTLLYDFMQKLKDRNSNVCS
Ga0209282_10693351	3300027666	Root Nodules	MQTKMIFVQNLINDSCKQIEKTQGQIVGTKMGSIAGNDQNTLLYDFMQKLKD
Ga0209282_10729902	3300027666	Root Nodules	MILGQNLINDSCRQVEKTQGQIAGTKMGSFVGNDQNS
Ga0209282_10816472	3300027666	Root Nodules	MQTKMIFKENLTNDLYRQVEKTQGQIVGTKMGSFVGNDQNTLLCDFMQKLE
Ga0209282_10854861	3300027666	Root Nodules	MRLKIDFVQILINDLCKQVEKTQGQIAGTKKSSFVGNDQNTLLYDFMQKFKRLKK
Ga0209282_10879841	3300027666	Root Nodules	TNDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQK
Ga0209282_10940654	3300027666	Root Nodules	GFVQNLIYDSCKQIEKAQGQIARTKMGSFVGNDQNTLLYDFMQKLKD
Ga0209282_10940751	3300027666	Root Nodules	MIFVQNLIKDLCKTVEKTQGQIVGTENGSFVGNDQNTLLYDFMQKFKRLKQ
Ga0209282_11258272	3300027666	Root Nodules	QNLINDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLE
Ga0209282_11276482	3300027666	Root Nodules	MIFAQNLINDSCRQVEKTQGQIVGTKMGSTARNDQNTLLCDFMQKMLE
Ga0209282_11312971	3300027666	Root Nodules	MIFKQNLTNKLRSQVEKDSKQMQGLKMGSIAGNDQNTLLYDFMQKYKDRNSNVCS
Ga0209282_11358452	3300027666	Root Nodules	MIFVQNLIDDSCKQIEKTPGQIVGTKMGSFVGNDQNTLLCKSWNKMEENM
Ga0209282_11782921	3300027666	Root Nodules	MIFVQNLINDSCRQVEKTQGQIVGTKMGSFVGNDQNTLLYDFMQQLE
Ga0209282_11833221	3300027666	Root Nodules	QMQNQDDFVQNLINDSCRQIKKTQGQIARIEMGSFVGNDHNTLLYDYM
Ga0209282_11894342	3300027666	Root Nodules	VQNLINDSYKQIEKTQGQIVGTKMDSFVGNDQNTLLYDFRQKFKRLKK
Ga0209282_12029062	3300027666	Root Nodules	MVFKQNLINDSCKQIEKTQGPIVGTKMGSFAGNDQNTLLYDFMQKLKDRNSNVCS
Ga0209282_12101811	3300027666	Root Nodules	VQNLINDLCKQIDKTQGQIVGTKMGSIAGNDQNTLLYDFMQKLKG
Ga0209282_12189491	3300027666	Root Nodules	MQCXDDFFGQNLIDDLCRQVEKTRRQIVGTKMGSSVGNDQNTLLYDFM
Ga0209282_12200191	3300027666	Root Nodules	MIFGQNLINDSCRQVEKTQGQIVGTKMGSFVGNDQNTL
Ga0209282_12224881	3300027666	Root Nodules	MIFGPKLIDDSCRQVKKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLE
Ga0209282_12472491	3300027666	Root Nodules	LINDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFM
Ga0209282_12537931	3300027666	Root Nodules	QNLTNDSCKQIEKTQGQIVGTKMGSIAGNDQNTLLYDFMQEFKRLKQ
Ga0209282_12559811	3300027666	Root Nodules	MIFVQNLINDSCKQIDKTQGQIVGTKTGSVAGNDQNTLLYDFMQKFKRQRQXRT
Ga0209282_12846571	3300027666	Root Nodules	MQIKMIFVQNLINDSCKPIEKTQGQIVGTKMGSIAGNDQNTLLYDFMQKFKRLK
Ga0209282_12984391	3300027666	Root Nodules	MQTKMIFVQNLINGSCKRIEKTQGQIVGTKMGSFVGNDQNILLYDFMQKLKDRDSDVCS
Ga0209282_13058222	3300027666	Root Nodules	MTFVQNLINDSCKQIEKTQGQIAGTKMDSFVGNDHNTLSYDFM
Ga0209282_13337641	3300027666	Root Nodules	TIFVQNLINDSCKQIEKTQGQIVGTKMGSIAGNDQNTLLCESWNKMEENM
Ga0209282_13462962	3300027666	Root Nodules	MIFVQNLINDLCKQIEKTQGQIVGTKMGSIAGNDQNTLLYDFTQKLKDRNSNVCS
Ga0209282_13590561	3300027666	Root Nodules	MIFGQNLINDSCRQVEKTQGQIVGTKMGSFVGNDQNT
Ga0209282_13942801	3300027666	Root Nodules	MIFGQNLINDSCRPIEKTQGQTVGTKMGSTTGNDQNTLLCDFMQKMME
Ga0209282_14085341	3300027666	Root Nodules	NLTNDLCKQIEKTQGQIVGTKMGSIAGNDQNTLLYDFMQKFKRLKQ
Ga0209282_14126011	3300027666	Root Nodules	MQIKMIFVQNLINDSCKQIEKTQGQIVGTKMGSFAGNDQNTLLYDLMQKFKRLKQ
Ga0209282_14250851	3300027666	Root Nodules	VQNLTNDSCKQIEKTQGQIVGTKMGSFVGNDQNTLLYDFMQKLE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067455

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences