Metagenome Family F067456

Basic Information
Family ID	F067456
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	59 residues
Representative Sequence	VVKTTIKLSITNNRGKDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYRGKDDNKTVYYKQPW
Number of Associated Samples	9
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.52 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	80.00 %
Associated GOLD sequencing projects	7
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.21

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (99.200 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Nodule → Unclassified → Unclassified → Root Nodules (43.200 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.800 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 2.22% Coil/Unstructured: 97.78%
Feature Viewer

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.21
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.21
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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.20 %
All Organisms	root	All Organisms	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.20 %
Viruses	superkingdom	All Organisms → Viruses	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.20 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.80 %

Visualization

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Scaffold	Taxonomy	Length	IMG/M Link
3300006946\|Ga0079104_1053366	Not Available	893	Open in IMG/M
3300006946\|Ga0079104_1113922	Not Available	533	Open in IMG/M
3300006948\|Ga0099826_10274627	Not Available	875	Open in IMG/M
3300006948\|Ga0099826_10371798	Not Available	704	Open in IMG/M
3300006948\|Ga0099826_10378195	Not Available	695	Open in IMG/M
3300006948\|Ga0099826_10481031	Not Available	584	Open in IMG/M
3300006948\|Ga0099826_10481031	Not Available	584	Open in IMG/M
3300006948\|Ga0099826_10494302	Not Available	573	Open in IMG/M
3300006948\|Ga0099826_10518581	Not Available	554	Open in IMG/M
3300006948\|Ga0099826_10524336	Not Available	550	Open in IMG/M
3300006948\|Ga0099826_10534004	Not Available	543	Open in IMG/M
3300006948\|Ga0099826_10534004	Not Available	543	Open in IMG/M
3300022739\|Ga0228711_1029355	Not Available	3026	Open in IMG/M
3300022739\|Ga0228711_1040800	Not Available	1441	Open in IMG/M
3300022739\|Ga0228711_1040800	Not Available	1441	Open in IMG/M
3300022739\|Ga0228711_1044693	Not Available	1154	Open in IMG/M
3300022739\|Ga0228711_1044693	Not Available	1154	Open in IMG/M
3300022739\|Ga0228711_1045392	Not Available	1109	Open in IMG/M
3300022739\|Ga0228711_1045392	Not Available	1109	Open in IMG/M
3300022739\|Ga0228711_1046091	Not Available	1073	Open in IMG/M
3300022739\|Ga0228711_1048281	Not Available	964	Open in IMG/M
3300022739\|Ga0228711_1050140	Not Available	883	Open in IMG/M
3300022739\|Ga0228711_1050182	Not Available	881	Open in IMG/M
3300022739\|Ga0228711_1051582	Not Available	830	Open in IMG/M
3300022739\|Ga0228711_1052492	Not Available	799	Open in IMG/M
3300022739\|Ga0228711_1052492	Not Available	799	Open in IMG/M
3300022739\|Ga0228711_1052649	Not Available	794	Open in IMG/M
3300022739\|Ga0228711_1055801	Not Available	702	Open in IMG/M
3300022739\|Ga0228711_1056020	Not Available	696	Open in IMG/M
3300022739\|Ga0228711_1059125	Not Available	619	Open in IMG/M
3300022740\|Ga0228710_1035880	Not Available	1865	Open in IMG/M
3300022740\|Ga0228710_1035880	Not Available	1865	Open in IMG/M
3300022740\|Ga0228710_1035880	Not Available	1865	Open in IMG/M
3300022740\|Ga0228710_1035880	Not Available	1865	Open in IMG/M
3300022740\|Ga0228710_1035880	Not Available	1865	Open in IMG/M
3300022740\|Ga0228710_1040393	All Organisms → Viruses → Predicted Viral	1412	Open in IMG/M
3300022740\|Ga0228710_1042619	Not Available	1242	Open in IMG/M
3300022740\|Ga0228710_1042619	Not Available	1242	Open in IMG/M
3300022740\|Ga0228710_1043053	Not Available	1212	Open in IMG/M
3300022740\|Ga0228710_1043053	Not Available	1212	Open in IMG/M
3300022740\|Ga0228710_1043851	Not Available	1160	Open in IMG/M
3300022740\|Ga0228710_1048413	Not Available	928	Open in IMG/M
3300022740\|Ga0228710_1048413	Not Available	928	Open in IMG/M
3300022740\|Ga0228710_1051043	Not Available	826	Open in IMG/M
3300022740\|Ga0228710_1054967	Not Available	709	Open in IMG/M
3300022740\|Ga0228710_1055222	Not Available	702	Open in IMG/M
3300022740\|Ga0228710_1055914	Not Available	683	Open in IMG/M
3300022740\|Ga0228710_1059319	Not Available	604	Open in IMG/M
3300022740\|Ga0228710_1060070	Not Available	589	Open in IMG/M
3300022740\|Ga0228710_1061939	Not Available	555	Open in IMG/M
3300022740\|Ga0228710_1062639	Not Available	542	Open in IMG/M
3300027111\|Ga0209281_1030013	Not Available	978	Open in IMG/M
3300027111\|Ga0209281_1030013	Not Available	978	Open in IMG/M
3300027666\|Ga0209282_1044850	Not Available	2592	Open in IMG/M
3300027666\|Ga0209282_1044850	Not Available	2592	Open in IMG/M
3300027666\|Ga0209282_1044850	Not Available	2592	Open in IMG/M
3300027666\|Ga0209282_1044850	Not Available	2592	Open in IMG/M
3300027666\|Ga0209282_1224258	Not Available	849	Open in IMG/M
3300027666\|Ga0209282_1254611	Not Available	773	Open in IMG/M
3300027666\|Ga0209282_1254611	Not Available	773	Open in IMG/M
3300027666\|Ga0209282_1343088	Not Available	615	Open in IMG/M
3300027666\|Ga0209282_1363816	Not Available	586	Open in IMG/M
3300027666\|Ga0209282_1429956	Not Available	508	Open in IMG/M
3300031967\|Ga0315914_1042164	Not Available	1455	Open in IMG/M
3300031967\|Ga0315914_1049383	Not Available	1071	Open in IMG/M
3300031967\|Ga0315914_1049466	Not Available	1068	Open in IMG/M
3300031967\|Ga0315914_1054527	Not Available	890	Open in IMG/M
3300031967\|Ga0315914_1055684	Not Available	857	Open in IMG/M
3300031967\|Ga0315914_1056676	Not Available	830	Open in IMG/M
3300031967\|Ga0315914_1056676	Not Available	830	Open in IMG/M
3300031967\|Ga0315914_1059699	Not Available	759	Open in IMG/M
3300031967\|Ga0315914_1059699	Not Available	759	Open in IMG/M
3300031967\|Ga0315914_1061053	Not Available	730	Open in IMG/M
3300031967\|Ga0315914_1071136	Not Available	564	Open in IMG/M
3300031967\|Ga0315914_1073524	Not Available	534	Open in IMG/M
3300031967\|Ga0315914_1075069	Not Available	515	Open in IMG/M
3300031967\|Ga0315914_1075578	Not Available	509	Open in IMG/M
3300031967\|Ga0315914_1076244	Not Available	502	Open in IMG/M
3300033430\|Ga0315913_1050255	Not Available	1710	Open in IMG/M
3300033430\|Ga0315913_1058090	Not Available	1295	Open in IMG/M
3300033430\|Ga0315913_1059294	Not Available	1247	Open in IMG/M
3300033430\|Ga0315913_1066034	Not Available	1018	Open in IMG/M
3300033430\|Ga0315913_1066412	Not Available	1007	Open in IMG/M
3300033430\|Ga0315913_1077038	Not Available	772	Open in IMG/M
3300033430\|Ga0315913_1077038	Not Available	772	Open in IMG/M
3300033430\|Ga0315913_1077908	Not Available	757	Open in IMG/M
3300033430\|Ga0315913_1083837	Not Available	671	Open in IMG/M
3300033430\|Ga0315913_1087744	Not Available	624	Open in IMG/M
3300033430\|Ga0315913_1090893	Not Available	591	Open in IMG/M
3300033430\|Ga0315913_1090893	Not Available	591	Open in IMG/M
3300033430\|Ga0315913_1095930	Not Available	545	Open in IMG/M
3300033430\|Ga0315913_1096977	Not Available	537	Open in IMG/M
3300033430\|Ga0315913_1099224	Not Available	520	Open in IMG/M
3300033464\|Ga0315915_1058866	Not Available	1231	Open in IMG/M
3300033464\|Ga0315915_1058866	Not Available	1231	Open in IMG/M
3300033464\|Ga0315915_1069164	Not Available	935	Open in IMG/M
3300033464\|Ga0315915_1077175	Not Available	773	Open in IMG/M
3300033464\|Ga0315915_1077175	Not Available	773	Open in IMG/M
3300033464\|Ga0315915_1079394	Not Available	737	Open in IMG/M
3300033464\|Ga0315915_1080447	Not Available	721	Open in IMG/M
3300033464\|Ga0315915_1081370	Not Available	707	Open in IMG/M
3300033464\|Ga0315915_1086862	Not Available	636	Open in IMG/M
3300033464\|Ga0315915_1086862	Not Available	636	Open in IMG/M
3300033464\|Ga0315915_1096409	Not Available	532	Open in IMG/M
3300033464\|Ga0315915_1097301	Not Available	524	Open in IMG/M

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Nodule	Host-Associated → Plants → Nodule	43.20%
Roots	Host-Associated → Plants → Roots	36.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Nodule → Unclassified	43.20%
Nodule	Host-Associated → Plants → Roots → Nodule	36.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.00%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Nodule → Unclassified → Unclassified	43.20%
Unclassified	Host-Associated → Plants → Roots → Nodule → Unclassified	36.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.00%

Habitat	Taxonomy	Distribution
Root Nodules	Host-Associated → Plants → Nodule → Unclassified → Unclassified → Root Nodules	43.20%
Root Nodules	Host-Associated → Plants → Roots → Nodule → Unclassified → Root Nodules	36.80%
Root Nodules	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules	20.00%

Visualization

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Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006946	Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG	Host-Associated	Open in IMG/M
3300006948	Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15	Host-Associated	Open in IMG/M
3300022739	Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - brown nodules	Host-Associated	Open in IMG/M
3300022740	Root nodule microbial communities from Medicago polymorpha collected in Santa Monica, California, United States - pink nodules	Host-Associated	Open in IMG/M
3300027111	Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes)	Host-Associated	Open in IMG/M
3300027666	Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes)	Host-Associated	Open in IMG/M
3300031967	Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules	Host-Associated	Open in IMG/M
3300033430	Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules	Host-Associated	Open in IMG/M
3300033464	Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0079104_10533662	3300006946	Root Nodules	MLKTTIQEREHCLIPTTVVKKTIHMSITNHRGKDDNTTKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYSQPPW*
Ga0079104_11139222	3300006946	Root Nodules	TVVKTTIKLSITNNRGRDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYRGKDDNKTVYYKQPW*
Ga0099826_102746272	3300006948	Root Nodules	VVKTTINLSITNNRGRDDKTRKIKLSNTNYRGKDDNTRKITLSNTNYCGKDDNKTV*
Ga0099826_103717982	3300006948	Root Nodules	VVNTTIKLSNTNYRGKDDNTRKIKLSNTNYRGKDDDMRKIKLSNTNYRGKDDNTRK
Ga0099826_103781952	3300006948	Root Nodules	VVKKTTQLSITNHRGKEDNTRKITLSNTNYRGKHDNTRKIKLPNTNYRGK
Ga0099826_104810311	3300006948	Root Nodules	KTTIKLSNTKYRGKDDDTRKIKLSITNYRGKDDNTRRITLSHTNYRGKEDNTHVYYQHPW
Ga0099826_104810312	3300006948	Root Nodules	VVKTTIKLSNINYHGKDDNKREIKLSNTNYRGKDDDTRNINMSITNYCGKDDNT
Ga0099826_104943021	3300006948	Root Nodules	DDTRKIKLSNTNYRGKDDDMRKIKLSITNYRGKHDNRRKITLYNTNYRGKDDNKTV*
Ga0099826_105142811	3300006948	Root Nodules	MRKIKLSITNYRGKDDNRRKITLYNTNYRGKDDNKRKITLSNTNYCAKDDNKTV*
Ga0099826_105185812	3300006948	Root Nodules	VVKKTIHMSITNHRGKDDNTRNIKLSNTNYLGKDDKTRKIKLSNINYRGKDDNKTVYYQPPR*
Ga0099826_105243361	3300006948	Root Nodules	VVKTTIKLSITNYRGKDDYTIKIKLSITNYRGNVGNT*KITLSSTNYRGKDDNTTVYYNP
Ga0099826_105340042	3300006948	Root Nodules	VVKKTIHMSITNHRGKDDNTRNIKLSNTNYRGKDDKTRKIKLSNINYRGKDDNKTVYYQPPR*
Ga0099826_105340043	3300006948	Root Nodules	TKYRGKDDDTRKIKLSITNYRGKDDNTRKITLSNTNYCGKEDNTHVYYQPPW*
Ga0228711_10293552	3300022739	Root Nodules	VVKTTIKLSITNYHGKDDNTRKIKLSNINYRGKDDDTGKIKLSNSNYRGKDDKYKKDKTV
Ga0228711_10345153	3300022739	Root Nodules	MRKIKLSITNYRGKDDNRRKITLYNTNYRGKDDNTRKITLSNTNYCAKDDNKTV
Ga0228711_10408003	3300022739	Root Nodules	VVKTTIKLSITNNRGKDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYRGKDDNKTVYYKQPW
Ga0228711_10408005	3300022739	Root Nodules	YLIPTTVVKTTTQLSITNHRGKYDNTRKITLSNTNYRGKDDNTRKITMSNTTYRGKDDNKTVYYKQPW
Ga0228711_10446931	3300022739	Root Nodules	VLKTTIKLSNTCYRGKDDNTREIKLSHTNYRGKDADTRKIKLSNTNYRGKDYNTRNIKRSNTNYSGKD
Ga0228711_10446932	3300022739	Root Nodules	VVKKTIQLSITNHRGKDDNTRKNKLSNTNYRGKDDKTRKIKLSNTNYRGKDDFKTVYYQPPW
Ga0228711_10453923	3300022739	Root Nodules	VVKTTIKLSIPNHRGKGDNTRTIKLSNTNYRGIDDKTRKITLSNTSYRGKDDNKTV
Ga0228711_10453924	3300022739	Root Nodules	VVKMTIHMSITNHRGKDDNTTKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYSQPPW
Ga0228711_10460913	3300022739	Root Nodules	VVKTTIKLPITNYRGKDDYTRKIKLSNTNYRGKVDDTRKIKLSITNYRGKVGIT
Ga0228711_10477742	3300022739	Root Nodules	RKIKLSITNYRGKDDNRRKITLYNTNYRGKDDNTRKITLSNTNYCAKDDNKTV
Ga0228711_10482813	3300022739	Root Nodules	TTVVKKTIHMSITNHRGKDDNTRNIKLANTNYRGKDDKTRKIRLSNINYRGKDDNKTVYYQLPR
Ga0228711_10500451	3300022739	Root Nodules	VVKTTIKLSNINYRGKDDNKREIKLTNTNYRGKDDDTRNINMSITNYCGKDDNTRMITLS
Ga0228711_10501402	3300022739	Root Nodules	VVKTTTQLSITNHRGKDDNTRQITVSNANYRGKDDNTRKIKLSNTNYRGKVDNTTMYYQPPL
Ga0228711_10501822	3300022739	Root Nodules	VVKTKIKLSITNHRGKDDNTRKIKLSNTNYRGKDDKTRIITLSNTNYRVKDDNKTV
Ga0228711_10515822	3300022739	Root Nodules	VVKKTIHMSITNHRGKDDNTRNIKLSNTNYRGKDDKTRKIKLSNINYRGKDDNKTVYYQPPR
Ga0228711_10524922	3300022739	Root Nodules	VVKTTIKLSIPNHRGKGDNTRTIKLSNTNYRGIDDKTRKITLSNTSYRGKDDNKTI
Ga0228711_10524923	3300022739	Root Nodules	VVKKTIHMSITNHRGKDDNTTKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYSQPPW
Ga0228711_10526491	3300022739	Root Nodules	VVKTTIKLSNTKYRGKDDDTRKIKLSITNYRGKDDNTRRITLSNTNYRGKEDNTHVYYQHPW
Ga0228711_10538681	3300022739	Root Nodules	VVKTTTQLSITNHRGKDDNTRKIILSNANYRGTDDNSRKIKLSNTNYRGKDD
Ga0228711_10558012	3300022739	Root Nodules	VVKTTIKLSITNNRGKDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYCGKDDNKTVYYKQPW
Ga0228711_10560202	3300022739	Root Nodules	MSITNTHGKDDNTRKIKLSNTNYRGKDDKTRKIKLSNSKYRGKDDNKTVYYQPPW
Ga0228711_10591252	3300022739	Root Nodules	GKDDNTRKIKQSNTNYRCKDDKTRKIKLSNTNYRRKDENKTVYYQPPW
Ga0228710_10358801	3300022740	Root Nodules	VVKTTIKLSNINYHGKDDNKREIKLSNTNYRGKDDDTRNINMSITNYCGKDDN
Ga0228710_10358802	3300022740	Root Nodules	VVKKTIHMSITNTHGKDDNTRKIKLSNTNYRGKEDKTRKIKLSNIKYRGKDDNKTVYYQPPW
Ga0228710_10358804	3300022740	Root Nodules	VVRTTIKLSITNHRGKDDNTRKIKLSNTNYRGKDDKTRIITLSNTNYRVKDDNKTV
Ga0228710_10358805	3300022740	Root Nodules	VVKKTIQLSITNHRGKDYNTRKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYYQPPW
Ga0228710_10358808	3300022740	Root Nodules	NHRGKDDNTRKIKLSNTNYRGKDDKTRKIKLFNINYRGKDDNKTVYYQPPW
Ga0228710_10403935	3300022740	Root Nodules	VVKTTIKLSITNNRGKDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYRGKDDNKSVYYKQPW
Ga0228710_10426193	3300022740	Root Nodules	VVKKTIQLSITNHHGKDDNTRKIKLSNTNYRGKDDKTRIITLSNTNHRVKDDNKTVEYLLPW
Ga0228710_10426195	3300022740	Root Nodules	VVKKTIHMSITNHRGKDDNTRNIKLANTNYRGKDDKTRKIRLSNINYRGKDDNKTVYYQLPR
Ga0228710_10430531	3300022740	Root Nodules	CLIPSTVVKMTIHMSITNHRGKDDNTTKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYSQPPW
Ga0228710_10430533	3300022740	Root Nodules	VVKTTIKLSNRNYRGKDDNKREIKLSNTNYRGKDDDTRKINMSITNYCGKDDNTRMIT
Ga0228710_10438514	3300022740	Root Nodules	VVKTTIKLSNTKYRGKDDDTRKIKLSITNYRGKDDNTRRITLSHTNYRGKEDNTHVYYQHPW
Ga0228710_10484132	3300022740	Root Nodules	VVKTTIKLSITNNRGRDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYRGKDDNKTVYYKQPW
Ga0228710_10484134	3300022740	Root Nodules	VVKTTIKLSITNNRGKDDNTRKITLSNANYRGKDDNTRKITLSNTIYRGKDDNKTVYYKQPW
Ga0228710_10510431	3300022740	Root Nodules	VVKTTTQLSITNHRGKDDKTRKITLSNTNYRGKDDNTKKIKLSNTNYRGKDENT
Ga0228710_10544052	3300022740	Root Nodules	MKKIKLSITTYRGKDDNTRKITLSNTNYRGKDDNTRKITLSNTNYCAKDDNKTV
Ga0228710_10549671	3300022740	Root Nodules	NYLISTTVVKTTIKLSITNLRGKDDNKRTIKLSNTNYRGKDEKTRKIRLSNTNYRGKDDSKTV
Ga0228710_10552221	3300022740	Root Nodules	VVKTTIKLSITNHRGKDDNTRTIKLSNTNYRGKDDKTRKIRLSNTNYRGKDDNKTV
Ga0228710_10559141	3300022740	Root Nodules	RKIKLSNTNYRGKADDMRKIKLSIRTYRGKDDHTRKITLSNTIYRGKDDNKTVYYKQPW
Ga0228710_10593192	3300022740	Root Nodules	SNTNYRGKADDMRKIKLSLTTYRGKDDNTRKITLSNTNYRGKVDNTTMYYQPPL
Ga0228710_10600701	3300022740	Root Nodules	NCLIPTTVARTTIKMSNTNYRGKDDDMRKIKLSITNYRGKDDNTRKITLSNTNYRGKDDNTTVSYQPPW
Ga0228710_10611951	3300022740	Root Nodules	VVKTTTQLSITNHCGKDDNTRKITPSNTNYRGKDDNSRKIKLSNTNYRGKDENTRKI
Ga0228710_10614141	3300022740	Root Nodules	VVKTTTQLSITNHRGKEDNTRKITLSNTIYRGKDDNTKKIKLSNTNYRGKDQNTKKIKL
Ga0228710_10619392	3300022740	Root Nodules	RKIKLSNTNYRGKADDMRKIKLSIRTYRGKDDHTRKITLSNTTYRGKNDNKTVYYKQPW
Ga0228710_10626392	3300022740	Root Nodules	VVKTTTQLSITNHRGKYDNTRKITLSNTNYRGKDDNTRKITMSNTTYRGKDDNKTVYYKQPW
Ga0209281_10300132	3300027111	Root Nodules	VVKKTIHMSITNHRGKDDNTTKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYSRPPW
Ga0209281_10300133	3300027111	Root Nodules	MVKMTIKEIKLSNTNYRGKDDDTRKINMSITNYCGKDDNTRMITLSNTNYHVKDDNTRNI
Ga0209282_10448501	3300027666	Root Nodules	VVKKTIQLSITNHRGKDDNTRKIKLSNTNYRGKDDKTRKIKLYNTNYRGKDDNKTVYYQPPW
Ga0209282_10448502	3300027666	Root Nodules	VVKTTIKLSITNHRGKDDNTRKIKLSNTNYRGKDDKTRIITLSNTNYRVKDDNKTV
Ga0209282_10448505	3300027666	Root Nodules	VVKTTIKLSITNHRGKDDNTRTIKLSNTNYRGKDDQTRKITLSNTNYHGKDDNKTVQYQLPW
Ga0209282_10448508	3300027666	Root Nodules	VVKTTIKLSITNHRGKDDNTRTIKLSNTNYRGKDDQTRKITLSNTNYRGKDDNKTV
Ga0209282_12242582	3300027666	Root Nodules	MSITNTHGKDDNTRKIKLSNTNYRGKEDKTRKIKLSNIKYRGKDDNKTVYYQPPW
Ga0209282_12546111	3300027666	Root Nodules	MSITDHRGKDDNTRKIKLSNTNYRGKYDKTRKIKLSNTNYRGKDDNKTVYSQPPW
Ga0209282_12546113	3300027666	Root Nodules	TTVVKIPIKLSITNHRGKDDNTRKIKLSNTNYRGKDDKTRIITLSNTNYRVKDDNKTV
Ga0209282_13430882	3300027666	Root Nodules	PSTVVKTTIKLSNTKYRGKDDDTRKIKLSITNYRGKDDNTRRITLSHTNYRGKEDNTHVYYQHPW
Ga0209282_13638161	3300027666	Root Nodules	VVKKTIQISITNHRGKDDNTRKIKQSNTNYRCKDDKTRKIKLSNTNYRRKDENKTVYYQPPW
Ga0209282_14299561	3300027666	Root Nodules	IKLSNTNYRGKDDDMRKIKLSITNYRGKDDNTRKITLSNTNYRGKDDNTTV
Ga0315914_10421643	3300031967	Root Nodules	VVKTTIKLSITNNRGKDDNTRKIKLSNTNYRGKDDNTRKISLSNTIYRGKDDNKTVYYKQPWERR
Ga0315914_10493832	3300031967	Root Nodules	MSITNHRGKDDNTRKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYSQPPW
Ga0315914_10494662	3300031967	Root Nodules	VVKTTIKLSITNNRGKDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYRGKDDNKTVYYKEPW
Ga0315914_10525631	3300031967	Root Nodules	DDDTRKIKLSNTNYRGKDDDMRKIKLSITNYRAKDDNKRKITLYNTNYRGKDDNTTVYYQPPS
Ga0315914_10540951	3300031967	Root Nodules	VVKSTTQLCITNHRCKDDHTRKITLSNTIYRGKDDNTRKIKLSNTNYRGKDDDTRK
Ga0315914_10545271	3300031967	Root Nodules	VVKTTIKLSITNHRGKDDNTRTIKLSNTNYRGKDDKTREITLSNTSYRGKDDNKTV
Ga0315914_10556841	3300031967	Root Nodules	HRGKDDNTRKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKMVYYQHPC
Ga0315914_10566761	3300031967	Root Nodules	IKLSITNHRGKDDNTRTIKLSNTNYRGKDDQTRKITLSNTNYHGKDDNKTV
Ga0315914_10566763	3300031967	Root Nodules	MSITNHRGKDDNTRNIKLSNTNYRGKDDKTRKIKLSNINYRGKDDNKTVYYQPPR
Ga0315914_10596991	3300031967	Root Nodules	VVKTTIKLSNTFYRGKDDNTREIKLSNTNYRGKDADTRKIKLSNTNYRGKDYNT
Ga0315914_10596992	3300031967	Root Nodules	VLKTTIKLSNTYDRGKDDNTREIKLSNTNYRGKDADTRKIKLSNTNYRGKDDNKTV
Ga0315914_10610533	3300031967	Root Nodules	VVKTTIKLSNINYRGKDDNKREIKLSNTNYRGKDDDTRNINMSITNYCGTDDNTRMITL
Ga0315914_10675021	3300031967	Root Nodules	VLKTTIKLSNTCYRGKDDNTREIKLSHTNYRGKDADTRKIKLSNTNYRGKDYNTRNIKRSNTNYSGK
Ga0315914_10706331	3300031967	Root Nodules	VVKTTTQLSTINHRGKDDNTRKITLSNTNYRGKDDNTRKIKLSNTNYRGKDDDMKKIKLSIT
Ga0315914_10711361	3300031967	Root Nodules	STVVNTTIKLSITNNRGRDDNTRKIKLSNTNYRSKDDNTRKITLSNTIYRGKDDNKTVYYKQLW
Ga0315914_10735242	3300031967	Root Nodules	VVKTAIKLSITNNRGKDDNTRKIKLSNTNYRGKDDDRSKIKLSNTNYRGKDDDMRKIKL
Ga0315914_10740531	3300031967	Root Nodules	LVKTTIKLSITNHRGKDDNTRKIKLSNTNYRGKDDKTRIITLSNTNY
Ga0315914_10750691	3300031967	Root Nodules	MVKTTIKLSITNNRGRDDNTRKIKLSNTNYRGKDDNTRMITLSNTIYRGKDDNKTVYYKQPW
Ga0315914_10755782	3300031967	Root Nodules	KKTIHMSITNTHGKDDNTRKIKLSNTNYRGKDDKTRKIKLSNSKYRGKDDNKTVYYQPPW
Ga0315914_10762442	3300031967	Root Nodules	IKLSITNNRGKDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYCGKDDNKTVYYKQPW
Ga0315913_10502552	3300033430	Root Nodules	VVKTTIQLFITNHRSKDDNTRKIKLSNTNYRGKDDITRKITLSNTNYRGKDDGTRKIKLSNINY
Ga0315913_10580901	3300033430	Root Nodules	VVKKTIQLAITNHRGKDDNTREIKVSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYYQPPW
Ga0315913_10592941	3300033430	Root Nodules	VVKTTTQLSITNHRGKDDNTRKIILSNANYRGTDDNSRKIKLSNTNYRGKDDNTRKI
Ga0315913_10660343	3300033430	Root Nodules	KKTIHMSITNHRGKDDNTRNIKLSNTNYRGKDDKTRKIKLSNINYRGKDDNKTVYYQPPR
Ga0315913_10664123	3300033430	Root Nodules	IKLSITNYRGKDDNTRKIKLSNTNYRGKDDKTRKIKLFNINYRGKDDNKTVYYQPPW
Ga0315913_10770381	3300033430	Root Nodules	VVKTTAQLSITNHRGKYDNTRKITLSNTNYRGKDDNSRKVKLSNTNYRGKDENTR
Ga0315913_10770384	3300033430	Root Nodules	NTNYRGKDDDMRKIKLSITNYRGKDDNTSKITLSNTNYRGKDDNTTVYYQPPW
Ga0315913_10779082	3300033430	Root Nodules	VVKTTIKLSITNNRGRDDKTRKIKLSITTYRGKDDNTRKITLSNTNDRGKDDNTTVYYQP
Ga0315913_10838372	3300033430	Root Nodules	MSNTNYRGKDDDMRKIKLSITNYRGKDDNTRKITLSNTNYRGKDDNTTVYYQPPW
Ga0315913_10877441	3300033430	Root Nodules	VVKTTIKLSITNNRGRDDNTRKIKLSNTNYRGKDDNTRKITLSNTIYRGKDDNTRKIK
Ga0315913_10908931	3300033430	Root Nodules	VVKTTIKLSITNNRGKDDNTRKIKLSNTNYRVKNDDRRKIKLSNTNYRSKDDDMRKIKLSITNYR
Ga0315913_10908933	3300033430	Root Nodules	STVVKTTIKLSITNNRGKDDNTRKIKLSNTNYRGKDDNRRKITLSNTIYRVKDDNKTVYYKQPW
Ga0315913_10959301	3300033430	Root Nodules	VVKTTIKLSITNHRGKDDNTRTIKLSNTNYRGKDDQTRKITLSNTNY
Ga0315913_10969772	3300033430	Root Nodules	VVKTIIKLSNTKYRGKDDDTRKIKLSITNYRGKDDNTRRITLSNTNYGGKEDNTHVYYQPPWKRRQYKKYKIV
Ga0315913_10992242	3300033430	Root Nodules	SITNHRGKDDNTRNIKLANTNYRGKDDKTRKIRLSNINYRGKDDNKTVYYQLPR
Ga0315915_10588662	3300033464	Root Nodules	MSNTNYRGKDDDMRKIKQSITNYRGKDDNTRKITLSNTNYRGKDDNKTVNYQPPW
Ga0315915_10588663	3300033464	Root Nodules	DDDTRKIKLSNTNYRGKDDDMRKIKLSITNYRGKDDNTSKITLSNTNYRGKDDNTTVYYQPPW
Ga0315915_10691641	3300033464	Root Nodules	VVKTTIKLSITNNRGKDDNTRKIKLSNTNYPDKDDNTRKITLSNTNYRGKDDKKTV
Ga0315915_10725491	3300033464	Root Nodules	MRKIKLSITTYRGKDDNTRKITLSNTKYRGKDDNTRKIKLSNTNYRGKYD
Ga0315915_10758071	3300033464	Root Nodules	VLKTTIKLSNTCYRGKDDNTREIKLSHTNYRGKDADTRKIKLSNTNYRGKDYNTRNIKRSNTNYSG
Ga0315915_10771751	3300033464	Root Nodules	VVKTKIKLSITNHRGKDDNTRKIKLSNTNYRGKDDKTRVITLSNTNYRVKDGNKTV
Ga0315915_10771753	3300033464	Root Nodules	VVKKTIQLSITNHRGKDDNTRKIKVSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTV
Ga0315915_10793941	3300033464	Root Nodules	MTIQEREHCLIPITVVKMTIHMSITNHRGKDDNTTKIKLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYSQPPW
Ga0315915_10804473	3300033464	Root Nodules	NTRKIKLSNTNYRGKADDMRKIKLSIRTYRGKDDHTRRITLSNTTYRGKNDNKTVYYKQP
Ga0315915_10813701	3300033464	Root Nodules	MTTIQEREHCLIPSTVVKTTIKRSITKIRVKDDNTRKITLSNTNYRGKDDKTRKIKLSNTNYRGKDDNKTVYSQPPW
Ga0315915_10847471	3300033464	Root Nodules	VVKTTTQLSTTNHRGKDDDTRKIKLSNTNYRGKDDDMRNIKLSITNYRGKDDNTSKITLSNT
Ga0315915_10868621	3300033464	Root Nodules	TVVKTTIKLSITNNRGRDDKTRKIKLSNTNYRGKDDNTRKITLSNTNYCGKDDNKTV
Ga0315915_10868622	3300033464	Root Nodules	VVKTTTQLSFTNHRGKDDNTRKIILSNANYRGTDDNSRKIKLSNTNYR
Ga0315915_10889582	3300033464	Root Nodules	VVKTTTQLSITNHRGKEDNTRKITLSNTNYRGKDDNTRKIKLSNTNYRGKDENTRKITL
Ga0315915_10931852	3300033464	Root Nodules	RGKDDDTRKIKLSNTNYRGKDDDMRKIKLSITNYRGKDDNTRKITLSNTNYRGKDDNTTV
Ga0315915_10964092	3300033464	Root Nodules	VVKTTIKLSITNNRGKDYNTRKIKLSKTNYRGKDDNTRKITLSNTIYRGKDDNKTVYYKQPW
Ga0315915_10973012	3300033464	Root Nodules	NCLISTTVVKTTIKLSITNHRGKDDNTRTIKLSNTNYRGKDDKTRKIRLSNTNYRGKDDNKTV
Ga0315915_10974261	3300033464	Root Nodules	VVKTTTQLSTTNHRGKDDNTRKITMSNTNYRGKDDNTKKIKLFNTNYCGKDEYTRKIIHSSTN
Ga0315915_10992931	3300033464	Root Nodules	GKDDDTRKIKRSNTNYRGKDDDLRTIKLSITNYRGKDDNTRKITLYNTNYRGKDDNTTVYYQPPW

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067456

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences