Metagenome / Metatranscriptome Family F068069

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068069
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	62 residues
Representative Sequence	MTPPPQHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR
Number of Associated Samples	91
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.20 %
% of genes near scaffold ends (potentially truncated)	24.00 %
% of genes from short scaffolds (< 2000 bps)	84.80 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.800 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.000 % of family members)
Environment Ontology (ENVO)	Unclassified (23.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.04% β-sheet: 25.00% Coil/Unstructured: 61.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13602	ADH_zinc_N_2	25.60
PF01757	Acyl_transf_3	7.20
PF00107	ADH_zinc_N	3.20
PF00830	Ribosomal_L28	2.40
PF01648	ACPS	2.40
PF01042	Ribonuc_L-PSP	1.60
PF02628	COX15-CtaA	1.60
PF02518	HATPase_c	1.60
PF03193	RsgA_GTPase	1.60
PF08240	ADH_N	1.60
PF09285	Elong-fact-P_C	1.60
PF03450	CO_deh_flav_C	1.60
PF07040	DUF1326	1.60
PF00583	Acetyltransf_1	0.80
PF03621	MbtH	0.80
PF00578	AhpC-TSA	0.80
PF01423	LSM	0.80
PF01293	PEPCK_ATP	0.80
PF03575	Peptidase_S51	0.80
PF13358	DDE_3	0.80
PF13683	rve_3	0.80
PF13745	Obsolete Pfam Family	0.80
PF12704	MacB_PCD	0.80
PF13291	ACT_4	0.80
PF01327	Pep_deformylase	0.80
PF05973	Gp49	0.80
PF00476	DNA_pol_A	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0227	Ribosomal protein L28	Translation, ribosomal structure and biogenesis [J]	2.40
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.60
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	1.60
COG1612	Heme A synthase	Coenzyme transport and metabolism [H]	1.60
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	1.60
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.80
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.80
COG1866	Phosphoenolpyruvate carboxykinase, ATP-dependent	Energy production and conversion [C]	0.80
COG3251	MbtH family protein, regulates adenylation domains of NRPSs	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.80
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.80 %
Unclassified	root	N/A	7.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.80 %
Unclassified	root	N/A	7.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.80 %
Unclassified	root	N/A	7.20 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	59.20 %
Unclassified	root	N/A	7.20 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	30.40 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.20 %
Unclassified	root	N/A	7.20 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	22.40 %
Acidobacteria bacterium SCGC AG-212-P17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	15.20 %
Unclassified	root	N/A	7.20 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.60 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.40 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.80 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.80 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.80 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	22.40 %
Acidobacteria bacterium SCGC AG-212-P17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	15.20 %
Unclassified	root	N/A	7.20 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.60 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	2.40 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.80 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.80 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.80 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	22.40 %
Acidobacteria bacterium SCGC AG-212-P17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	15.20 %
Unclassified	root	N/A	7.20 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	2.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.80 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.80 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.80 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.80 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	22.40 %
Acidobacteria bacterium SCGC AG-212-P17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	15.20 %
Unclassified	root	N/A	7.20 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2.40 %
unclassified Ktedonobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae	0.80 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.80 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.80 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.80 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	22.40 %
Acidobacteria bacterium SCGC AG-212-P17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	15.20 %
Unclassified	root	N/A	7.20 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2.40 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	0.80 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.80 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.80 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.80 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.80 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_117707309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	500	Open in IMG/M
3300003321\|soilH1_10039861	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300004479\|Ga0062595_100247861	All Organisms → cellular organisms → Bacteria → Acidobacteria	1152	Open in IMG/M
3300004479\|Ga0062595_100877513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	752	Open in IMG/M
3300005167\|Ga0066672_10665728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	671	Open in IMG/M
3300005434\|Ga0070709_10842817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	722	Open in IMG/M
3300005434\|Ga0070709_10846045	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005435\|Ga0070714_100963268	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005436\|Ga0070713_100386653	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300005436\|Ga0070713_100735099	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300005436\|Ga0070713_101153514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	749	Open in IMG/M
3300005439\|Ga0070711_100095905	All Organisms → cellular organisms → Bacteria → Acidobacteria	2147	Open in IMG/M
3300005439\|Ga0070711_100442968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	1062	Open in IMG/M
3300005439\|Ga0070711_101126512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	677	Open in IMG/M
3300005439\|Ga0070711_101999967	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300005458\|Ga0070681_10141973	All Organisms → cellular organisms → Bacteria	2331	Open in IMG/M
3300005518\|Ga0070699_100843424	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005518\|Ga0070699_101903872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	544	Open in IMG/M
3300005526\|Ga0073909_10146728	All Organisms → cellular organisms → Bacteria → Acidobacteria	980	Open in IMG/M
3300005526\|Ga0073909_10438508	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300005526\|Ga0073909_10546396	Not Available	566	Open in IMG/M
3300005529\|Ga0070741_10008760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	20067	Open in IMG/M
3300005530\|Ga0070679_101120018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	732	Open in IMG/M
3300005530\|Ga0070679_101515368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	618	Open in IMG/M
3300005533\|Ga0070734_10002812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19840	Open in IMG/M
3300005538\|Ga0070731_10049513	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2801	Open in IMG/M
3300005541\|Ga0070733_10150953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1507	Open in IMG/M
3300005542\|Ga0070732_10450025	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300005542\|Ga0070732_11006113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	510	Open in IMG/M
3300005554\|Ga0066661_10670348	Not Available	610	Open in IMG/M
3300005563\|Ga0068855_100138637	All Organisms → cellular organisms → Bacteria	2774	Open in IMG/M
3300005575\|Ga0066702_10144870	All Organisms → cellular organisms → Bacteria → Proteobacteria	1401	Open in IMG/M
3300005575\|Ga0066702_10741198	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	585	Open in IMG/M
3300005614\|Ga0068856_101318979	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005616\|Ga0068852_102700910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	516	Open in IMG/M
3300006028\|Ga0070717_10397570	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	1237	Open in IMG/M
3300006050\|Ga0075028_100839526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	562	Open in IMG/M
3300006173\|Ga0070716_100143044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1528	Open in IMG/M
3300006173\|Ga0070716_100157333	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300006175\|Ga0070712_100077997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2390	Open in IMG/M
3300006175\|Ga0070712_100609072	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300006175\|Ga0070712_100811446	All Organisms → cellular organisms → Bacteria → Acidobacteria	803	Open in IMG/M
3300006175\|Ga0070712_101668979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	558	Open in IMG/M
3300006175\|Ga0070712_101817155	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300006800\|Ga0066660_11038875	Not Available	655	Open in IMG/M
3300006804\|Ga0079221_11426503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	552	Open in IMG/M
3300006806\|Ga0079220_11025940	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300006806\|Ga0079220_11198505	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300006854\|Ga0075425_100077315	All Organisms → cellular organisms → Bacteria	3759	Open in IMG/M
3300006871\|Ga0075434_100797592	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300006914\|Ga0075436_100610286	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300006954\|Ga0079219_11202193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	656	Open in IMG/M
3300009012\|Ga0066710_101798836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	925	Open in IMG/M
3300009792\|Ga0126374_11002819	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	655	Open in IMG/M
3300010046\|Ga0126384_10190037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1617	Open in IMG/M
3300010046\|Ga0126384_10468806	All Organisms → cellular organisms → Bacteria → Acidobacteria	1079	Open in IMG/M
3300010047\|Ga0126382_10003113	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	7139	Open in IMG/M
3300010048\|Ga0126373_10512726	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300010048\|Ga0126373_12890067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	536	Open in IMG/M
3300010358\|Ga0126370_10627753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	932	Open in IMG/M
3300010359\|Ga0126376_10990016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	840	Open in IMG/M
3300010359\|Ga0126376_12378329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	576	Open in IMG/M
3300010360\|Ga0126372_10305515	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300010360\|Ga0126372_11093431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	815	Open in IMG/M
3300010361\|Ga0126378_11667953	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	724	Open in IMG/M
3300010361\|Ga0126378_12163534	Not Available	635	Open in IMG/M
3300010366\|Ga0126379_10636526	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300010366\|Ga0126379_10938767	All Organisms → cellular organisms → Bacteria → Acidobacteria	968	Open in IMG/M
3300010371\|Ga0134125_10055956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4386	Open in IMG/M
3300010371\|Ga0134125_10128467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2821	Open in IMG/M
3300010373\|Ga0134128_10678130	Not Available	1145	Open in IMG/M
3300010376\|Ga0126381_101102905	Not Available	1146	Open in IMG/M
3300010397\|Ga0134124_10021543	All Organisms → cellular organisms → Bacteria	5289	Open in IMG/M
3300010398\|Ga0126383_10050358	All Organisms → cellular organisms → Bacteria	3464	Open in IMG/M
3300011120\|Ga0150983_12224181	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300011271\|Ga0137393_10009629	All Organisms → cellular organisms → Bacteria	6607	Open in IMG/M
3300012202\|Ga0137363_10000068	All Organisms → cellular organisms → Bacteria → Acidobacteria	50390	Open in IMG/M
3300012202\|Ga0137363_10302120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1314	Open in IMG/M
3300012206\|Ga0137380_10027321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5257	Open in IMG/M
3300012925\|Ga0137419_10653833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	849	Open in IMG/M
3300012944\|Ga0137410_10948288	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300012944\|Ga0137410_11460883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	596	Open in IMG/M
3300012948\|Ga0126375_11215569	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300012957\|Ga0164303_11522219	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012958\|Ga0164299_10803501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	671	Open in IMG/M
3300012960\|Ga0164301_11539387	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	549	Open in IMG/M
3300012960\|Ga0164301_11621035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	538	Open in IMG/M
3300012960\|Ga0164301_11672913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	531	Open in IMG/M
3300012961\|Ga0164302_10356300	Not Available	980	Open in IMG/M
3300012984\|Ga0164309_10332208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1108	Open in IMG/M
3300012985\|Ga0164308_10448899	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300013105\|Ga0157369_10742074	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300016422\|Ga0182039_12207648	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300018433\|Ga0066667_10512241	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300018468\|Ga0066662_10107959	All Organisms → cellular organisms → Bacteria	1993	Open in IMG/M
3300018482\|Ga0066669_10144601	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300020070\|Ga0206356_11239586	Not Available	524	Open in IMG/M
3300020078\|Ga0206352_11232047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	720	Open in IMG/M
3300020082\|Ga0206353_10672339	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	621	Open in IMG/M
3300021170\|Ga0210400_10079785	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300021384\|Ga0213876_10285330	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300021404\|Ga0210389_10352170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1156	Open in IMG/M
3300021560\|Ga0126371_10811667	All Organisms → cellular organisms → Bacteria	1081	Open in IMG/M
3300021560\|Ga0126371_13038977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	568	Open in IMG/M
3300024288\|Ga0179589_10187105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	900	Open in IMG/M
3300025905\|Ga0207685_10226620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	892	Open in IMG/M
3300025912\|Ga0207707_10437680	All Organisms → cellular organisms → Bacteria → Acidobacteria	1119	Open in IMG/M
3300025913\|Ga0207695_10160230	All Organisms → cellular organisms → Bacteria	2182	Open in IMG/M
3300025913\|Ga0207695_11251561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	622	Open in IMG/M
3300025929\|Ga0207664_11291744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	649	Open in IMG/M
3300026552\|Ga0209577_10473906	Not Available	854	Open in IMG/M
3300027473\|Ga0207508_101826	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300027775\|Ga0209177_10217905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	688	Open in IMG/M
3300027842\|Ga0209580_10036889	All Organisms → cellular organisms → Bacteria → Acidobacteria	2242	Open in IMG/M
3300027842\|Ga0209580_10121284	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300027842\|Ga0209580_10167111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1086	Open in IMG/M
3300027867\|Ga0209167_10519510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	652	Open in IMG/M
3300027986\|Ga0209168_10108037	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1432	Open in IMG/M
3300030847\|Ga0075405_11956266	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031057\|Ga0170834_106815173	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300031231\|Ga0170824_100079721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	666	Open in IMG/M
3300031446\|Ga0170820_13629144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	545	Open in IMG/M
3300031469\|Ga0170819_15734654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	502	Open in IMG/M
3300031962\|Ga0307479_11075572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium SCGC AG-212-P17	771	Open in IMG/M
3300032261\|Ga0306920_104244651	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.00%
Host-Associated	Host-Associated	8.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.20%
Plants	Host-Associated → Plants	8.00%
Aquatic	Environmental → Aquatic	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.40%
Sediment	Environmental → Aquatic → Sediment	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.80%
Loam	Environmental → Terrestrial → Soil → Loam	22.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	11.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.20%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.40%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027473	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-HINK08-D (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1177073091	3300002568	Soil	MTNAIHSSRFRYKVVFAKDAQDLEAKLNNPEFTPSGYAVTHLAFNSARAEYLVILENENS
soilH1_100398612	3300003321	Sugarcane Root And Bulk Soil	MANAPQSNRPRYRVVFGKDAQDLEAKLNNPDFTPPGYAVTHLAFNSARAEYLAILEDEKL
Ga0062595_1002478612	3300004479	Soil	MTPPPPHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNNQS*
Ga0062595_1008775132	3300004479	Soil	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0066672_106657282	3300005167	Soil	MSAAPQNRPRYRVVFGKDAQDLESKLNNLDFVPAGYTLTHLTFNSARAEYLVILEDDRE*
Ga0070709_108428171	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0070709_108460451	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGH*
Ga0070714_1009632682	3300005435	Agricultural Soil	MTPPPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0070713_1003866533	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTNLVFNSARAEYLLILEDERNDGH*
Ga0070713_1007350992	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNEGR*
Ga0070713_1011535142	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPPHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0070711_1000959054	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPHSTRPRYRVVFGKDAQDLEGKLNDPGFTPAGYAITHLVFNSARAEYLVILEDEGNGGR*
Ga0070711_1004429682	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPNTSRPRYRVVFGKDAQDLEGKLNDPVFTPIGYTVTHLAFNSARAEYLLILEDERNDGH*
Ga0070711_1011265121	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPNSARPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTNLVFNSARAEYLLILEDERNDGH*
Ga0070711_1019999671	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTPQPHSTRPRYKVVFGKDAQDLEGKLNDPAFTPSGYAVTHLAFNSARAEYLVILEDEGNDGR*
Ga0070681_101419732	3300005458	Corn Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNNGH*
Ga0070699_1008434241	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MALPPHSARPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARVEYLLILEDERNDGR*
Ga0070699_1019038721	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPQHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0073909_101467282	3300005526	Surface Soil	MTPPPNSARPRYKVVFGKDAQDLEAKLNDSIFTPPGYAVIHLAFNSARAEYLLILEDERNNQS*
Ga0073909_104385082	3300005526	Surface Soil	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDE
Ga0073909_105463962	3300005526	Surface Soil	MMPPPHSSRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLIL
Ga0070741_1000876024	3300005529	Surface Soil	MSPSQSSERPRYKVVFGRDAQDLEMKLNDPIFTPAGYAVTHLAFNSARAEYLLILEDERVSQG*
Ga0070679_1011200181	3300005530	Corn Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGH*
Ga0070679_1015153682	3300005530	Corn Rhizosphere	THSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0070734_1000281217	3300005533	Surface Soil	MTPPPPHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0070731_100495133	3300005538	Surface Soil	MANPAQSTRLRYKVVFGKDAQDLQAKLNDPDFTPSGYAVTHLTFNSARAEYLVILEDEDNHG*
Ga0070733_101509531	3300005541	Surface Soil	MANTFQGNQSGRQRYRVVFGRDAQDLEQKLNDPGFTPPGYVVTHLAFNSARVEYLVLLEDEKRQP*
Ga0070732_104500252	3300005542	Surface Soil	TPPPPHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0070732_110061132	3300005542	Surface Soil	MANPVQSNRPRYKVVFGKDAQDLQGKLNDPDFTPSGYAVTHLTFNSARAEYL
Ga0066661_106703482	3300005554	Soil	MAAIQQNRPRYRVVFGKDAQDLESKLNNPDFVPAGYTLTHLTFNSARAEYLVILEQDEE*
Ga0068855_1001386374	3300005563	Corn Rhizosphere	MTPTPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0066702_101448702	3300005575	Soil	MAAIQQNRPRYRVVFGKDAQDLESKLNNPDFVPAGYTLTHLTFNSARAEYLVILENDDQG
Ga0066702_107411982	3300005575	Soil	MTPPPHSGRPRYKVVFGKDAQDLEGKLNDPGFTPAGYAITHLVFNSARAEYLVILEDEGNGGR*
Ga0068856_1013189791	3300005614	Corn Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILED
Ga0068852_1027009102	3300005616	Corn Rhizosphere	AMTPPPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGH*
Ga0070717_103975701	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTNLVFNSARAEYLLILEDERNDER*
Ga0075028_1008395261	3300006050	Watersheds	TSSQNNHLRYRVVFGRDAQDLEAKLNDTNFVPAGYTVTHLTFNSARAEYLVILEGDRE*
Ga0070716_1001430442	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTNSIHSSRSRYKVVFAKDAQDLEAKLNNPEFTPSGYAVTHLAFNSARAEYLVILEDENS
Ga0070716_1001573333	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPSHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTNLVFNSARAEYLLILEDERND
Ga0070712_1000779973	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	HSTRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDEGNDGR*
Ga0070712_1006090722	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDER*
Ga0070712_1008114462	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPHSSRPRYKVVFGKDAQDLEAKLNDSIFTPPGYAVTHLAFNSARAEYLLILEDERNQS*
Ga0070712_1016689792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPSHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0070712_1018171552	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPNSARPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERN
Ga0066660_110388752	3300006800	Soil	MATIQQNRPRYRVVFGKDAQDLESKLNNLDFVPAGYTLTHLTFNSARAEYLVILENDDQG
Ga0079221_114265031	3300006804	Agricultural Soil	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNEDR*
Ga0079220_110259401	3300006806	Agricultural Soil	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGH*
Ga0079220_111985052	3300006806	Agricultural Soil	MTPPPPHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGH*
Ga0075425_1000773153	3300006854	Populus Rhizosphere	MSAAPQNRPRYRVVFGKDAQDLESKLNNLDFVPAGYTLTHLTFNSARAEYLVILENDRE*
Ga0075434_1007975922	3300006871	Populus Rhizosphere	MPVPPHSGRPRYKVVFGKDAQDLESKLNDPVYTPVGYAVTHLAFNSARAEYLIILEDERNELR*
Ga0075436_1006102862	3300006914	Populus Rhizosphere	MTPPTHSTRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDEQNDGR*
Ga0079219_112021932	3300006954	Agricultural Soil	PRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0066710_1017988362	3300009012	Grasslands Soil	MSAAPQNRPRYRVVFGKDAKDLESKLNNLDFVPAGYTLTHLTFNSARAEYLVILEDDRE
Ga0126374_110028191	3300009792	Tropical Forest Soil	MHGLQSLTRLRYKVVFGKDAQDLQAKLNDPDLVPPGYVVTHLTFNSARA
Ga0126384_101900372	3300010046	Tropical Forest Soil	MHGLQSLTRLRYKVVFGKDAQDLQAKLNDPDLVPPGYVVTHLTFNSARAEYLVILEDEGSQE*
Ga0126384_104688062	3300010046	Tropical Forest Soil	MSSTQSSGRPRYKVVFGKDAQDLEAKLNDPIFTPSGYAVTHLVFNSARAEYLLILEDEGFEPR*
Ga0126382_100031136	3300010047	Tropical Forest Soil	MHGLQSLTRLRYRVVFGKDAQDLQAKLNDPDLVPSGYAVTHLTFNSARAEYLVIVEDEGPEN*
Ga0126373_105127261	3300010048	Tropical Forest Soil	MANPVQSNRLRYKVVFGKDAQDLQGKLNDPDFTPSGYAVTHLTFNSARAEYLVILEDEGFQDR*
Ga0126373_128900672	3300010048	Tropical Forest Soil	MTPPPNSGRLRYRVVFGKDAQDLEGKLNDPGFTPAGYAVTHLAFNSARAEYLVILEDERNEGR*
Ga0126370_106277532	3300010358	Tropical Forest Soil	MAIPAPSTRLRYKVVFGKDAQDLQAKLNDPDFTPSGYAVTHLTFNSARAEYLVILEDENLHD*
Ga0126376_109900162	3300010359	Tropical Forest Soil	MHGLQSPNRLRYRVVFGKDAQDLQAKLNDPDLVPSGYAVTHLTFNSARVEYLVILEDEGSQE*
Ga0126376_123783292	3300010359	Tropical Forest Soil	MHGLQSPNRLRYRVVFGKDAQDLQAKLNDPDLVPSGYAVTHLTFNSARVEYLVILEDEGSLE*
Ga0126372_103055151	3300010360	Tropical Forest Soil	MHSLHSQNRLRYRVVFGKDAQDLQAKLNDPDFVPSGYAVTHLTFNSARVEYLVILEDEGSQE*
Ga0126372_110934312	3300010360	Tropical Forest Soil	MHGLQSLTRLRYRVVFGKDAQDLQAKLNDPDLVPPGYAVTHLTFNSARAEYLVILEDEGSQ*
Ga0126378_116679532	3300010361	Tropical Forest Soil	MHGLQSPNRLRYRVVFGKDAQDLQAKLNDPDFVPSGYAVTHLTFNSARVEYLVILEDEGSQE*
Ga0126378_121635342	3300010361	Tropical Forest Soil	MHGLQSLTRLRYKVVFGKDAQDLQAKLNDPDLVPPGYVVTHLTFNSARAEYLVIL
Ga0126379_106365262	3300010366	Tropical Forest Soil	MHGLHSQNRLRYRVVFGKDAQDLQAKLNDPDFVPSGYAVTHLTFNSARVEYLVILEDEGSQE*
Ga0126379_109387672	3300010366	Tropical Forest Soil	MTPPPNSARPRYKVVFGKDAQDLEAKLNDSIFTPPGYAVTHLAFNSARAEYLLILEDERNNQS*
Ga0134125_100559564	3300010371	Terrestrial Soil	MTPPPQHSGRPRYKVVFGKDAQDLEAKLNDPIFTPVGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0134125_101284674	3300010371	Terrestrial Soil	MNHSQSSVRPRYKVVFGRDAQDLEMKLNDPIFTPAGYAVTHLAFNSARAEYLLILEDERVSQG*
Ga0134128_106781302	3300010373	Terrestrial Soil	MNPSQSSVRPRYKVVFGRDAQDLEMKLNDPIFTPAGYAVTHLAFNSARAEYLLILEDERVSQG*
Ga0126381_1011029052	3300010376	Tropical Forest Soil	MTPPPNTSRPRYRVVFGKDAQDLEGKLNDPVFTPVGYTVTHLAFNSARAEYLLILEDERNEGR*
Ga0134124_100215431	3300010397	Terrestrial Soil	MTPPPSHSGRSRYKVVFGKDAQDLEAKLKDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0126383_100503582	3300010398	Tropical Forest Soil	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNEGH*
Ga0150983_122241812	3300011120	Forest Soil	MTPSFSSSRPRYRVVFGKDAQDLEQKLNDPGFTPSGYAVTHLVFNSARAEYLVILEDENIQQHS*
Ga0137393_100096297	3300011271	Vadose Zone Soil	MHMTSQNNHLRYRVVFGRDAQDLEAKLNDTNFVPAGYTVTHLTFNSARAEYLVILEGDRE
Ga0137363_1000006830	3300012202	Vadose Zone Soil	MNILTNSSQSSRPRYRVVFGKDAQDLEQKLNDPRITPTGYAITNLTFNSARAEYLVILEDENIQER*
Ga0137363_103021201	3300012202	Vadose Zone Soil	TINILTNASQLSRPRYRVVFGKDAQDLEQKLNDPRITPPGYAITNLTFNSARAEYLVILEDENIHEH*
Ga0137380_100273216	3300012206	Vadose Zone Soil	MTPPPHSARPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLVILEDEQNDGR*
Ga0137419_106538331	3300012925	Vadose Zone Soil	TQITSRVDMNTSSQNNHLRYRVVFGRDAQDLEAKLNDTNFVPAGYTVTHLTFNSARAEYLVILEGDRE*
Ga0137410_109482882	3300012944	Vadose Zone Soil	MTPPPNSARPRYKVVFGKDAQDLEAKLNDSIFTPPGYAVTHLAFNSARAEYLLILEDERNQS*
Ga0137410_114608831	3300012944	Vadose Zone Soil	MHMTSQNNHLRYRVVFGRDAQDLEAKLNDTNFVPAGYTVTHLTFNSARAEYLVILEGDQQ
Ga0126375_112155692	3300012948	Tropical Forest Soil	MHGLQSPNRLRYRVVFGKDAQDLQAKLNDPDLVPSGYAVTHLTFNSARVEYLVILEDEGS
Ga0164303_115222192	3300012957	Soil	MPVPSHSGCPRYKVVFGKDAQDLESKLNDPVYTPVGYAVTHLAFNSARAEYLIIL
Ga0164299_108035011	3300012958	Soil	MTPPPNSARPRYKVVFGKDAQDLEAKLNDTIFTPPGYAVTHLAFNSARAEYLLILEDERNNQS*
Ga0164301_115393871	3300012960	Soil	MTPPPSHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGH*
Ga0164301_116210351	3300012960	Soil	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYTVTHLAFNSARAEYLLILEDERNEGR*
Ga0164301_116729131	3300012960	Soil	MTPPPNSARPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0164302_103563002	3300012961	Soil	MTPPPSSARPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDQR*
Ga0164309_103322082	3300012984	Soil	MTPPPNSARPRYKVVFGKDAQDLEGKLNDTIFTPPGYAVTHLAFNSARAEYLLILEDERNNQS*
Ga0164308_104488991	3300012985	Soil	MTPPPSHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0157369_107420742	3300013105	Corn Rhizosphere	YKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR*
Ga0182039_122076481	3300016422	Soil	TLFAMTPPPNTSRPRYRVVFGKDAQDLEGKLNDPVFTPIGYTVTHLAFNSARAEYLLILEDERNEGR
Ga0066667_105122412	3300018433	Grasslands Soil	MSAAPQNRPRYRVVFGKDAQDLESKLNNLDFVPAGYTLTHLTFNSARAEYLVILEDDRE
Ga0066662_101079591	3300018468	Grasslands Soil	MAAIQQNRPRYRVVFGKDAQDLESKLNNLDFVPAGYTLTHLTFNSARAEYLVILENDDQG
Ga0066669_101446011	3300018482	Grasslands Soil	MSTPVQRSRPRYNVVFGKDAQDLEGKLNDPGFVPAGYVLTQLTFNSARAEYLVILEDDQG
Ga0206356_112395861	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MTPTPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDE
Ga0206352_112320471	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR
Ga0206353_106723392	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MTPTPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR
Ga0210400_100797854	3300021170	Soil	MTPAPHSSRPRYKVVFGKDAQDLEAKLNDPIFTPSGYAVTHLAFNSARAEYLLILEDERNDEN
Ga0213876_102853301	3300021384	Plant Roots	MAIQQNQNRQRYRVVFGKDAQDLESKLNNPDFVPANYTLTHLTFNSARAEYLVILEQDEE
Ga0210389_103521701	3300021404	Soil	MNPAPYSARPRYKVVFGKDAQDLEAKLNDQGFTPTGYTVTHLAFNSARAEYLVILEDERNDQH
Ga0126371_108116672	3300021560	Tropical Forest Soil	MHGLQSLTRLRYKVVFGKDAQDLQAKLNDPDLVPPGYVVTHLTFNSARAEYLVILEDEGSQE
Ga0126371_130389771	3300021560	Tropical Forest Soil	QNRLRYRVVFGKDAQDLQAKLNDPDFVPSGYAVTHLTFNSARVEYLVILEDEGSQE
Ga0179589_101871052	3300024288	Vadose Zone Soil	MTPPPHSSRPRYKVVFGKDAQDLEGKLNDPIFTPAGYAVTHLAFNSARAEYLLILEDERNGQS
Ga0207685_102266201	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTPPPQHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLVILEDEGNDGR
Ga0207707_104376801	3300025912	Corn Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTNLVFNSARAEYLLILEDERNDGR
Ga0207695_101602301	3300025913	Corn Rhizosphere	MTPPPTHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTNLVFNSARAEYLLILEDER
Ga0207695_112515611	3300025913	Corn Rhizosphere	MTPPPQHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR
Ga0207664_112917442	3300025929	Agricultural Soil	MTPPPTHSGRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLIL
Ga0209577_104739062	3300026552	Soil	MSTPVQRTRPRYRVVFGKDAQDLEGKLNNPDFVPAGYVLIQLTFNSARAEYLVILEDDQG
Ga0207508_1018262	3300027473	Soil	TNNVNLSAMTPPPPHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNNQS
Ga0209177_102179053	3300027775	Agricultural Soil	MTPPPNSARPRYKVVFGKDAQDLEAKLNDSIFTPPGYAVIHLAFNSARAEYLLILEDERNNQS
Ga0209580_100368894	3300027842	Surface Soil	MTPPPPHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR
Ga0209580_101212842	3300027842	Surface Soil	TPPPPHSGRPRYKVVFGKDAQDLEAKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR
Ga0209580_101671111	3300027842	Surface Soil	MANPAQSTRLRYKVVFGKDAQDLQAKLNDPDFTPSGYAVTHLTFNSARAEYLVILEDEDNHG
Ga0209167_105195102	3300027867	Surface Soil	MANTFQGNQSGRQRYRVVFGRDAQDLEQKLNDPGFTPPGYVVTHLAFNSARVEYLVLLEDEKRQP
Ga0209168_101080372	3300027986	Surface Soil	MNTGTQSNRPRYRVVFGKDAQDLEMKLNNPDFAPRGYTVTHLTFNSARAEYLVILEDDAN
Ga0075405_119562662	3300030847	Soil	MTPPPHSTRPRYKVVFGKDAQDLEGKLNDPGFTPAGYAITHLVFNSARAEYLVILEDEGNDGR
Ga0170834_1068151732	3300031057	Forest Soil	MTPPPHSARPRYKVVFGKDAQDLEGKLNDPGFTPAGYAITHLVFNSARAEYLVILEDEGNGGH
Ga0170824_1000797211	3300031231	Forest Soil	MTTTNQPQRPRYRVVFGKDAQDLEQKLNDTAFTPLGYVVTHLVFNSARAEYLIILEG
Ga0170820_136291441	3300031446	Forest Soil	SLFAMMPPPHSARPRYKVVFGKDAQDLEGKLNDPGFTPAGYAVTHLVFNSARAEYLVILEDEGNDGR
Ga0170819_157346541	3300031469	Forest Soil	PPHSARPRYKVVFGKDAQDLEGKLNDPGFTPAGYAITHLVFNSARAEYLVILEDEGNGGH
Ga0307479_110755722	3300031962	Hardwood Forest Soil	MTPPPPHSTRPRYKVVFGKDAQDLEGKLNDPVFTPAGYAVTHLAFNSARAEYLLILEDERNDGR
Ga0306920_1042446511	3300032261	Soil	MTPPPNTSRPRYRVVFGKDAQDLEGKLNDPVFTPIGYTVTHLAFNSARAEYLLILEDERNEGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068069

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences