NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F070201

Metagenome / Metatranscriptome Family F070201

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F070201
Family Type Metagenome / Metatranscriptome
Number of Sequences 123
Average Sequence Length 76 residues
Representative Sequence MRTMPLQFLTWGTITAAVGSAVWLSSTDQAAFFCSVGYRATSRAMGLDIPLPTEPTRAGPSAKEPGSSAAKQLQASAG
Number of Associated Samples 89
Number of Associated Scaffolds 123

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 85.37 %
% of genes near scaffold ends (potentially truncated) 20.33 %
% of genes from short scaffolds (< 2000 bps) 66.67 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (65.854 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root
(12.195 % of family members)
Environment Ontology (ENVO) Unclassified
(40.650 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.220 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 45.28%    β-sheet: 0.00%    Coil/Unstructured: 54.72%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.29
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 123 Family Scaffolds
PF01266DAO 34.15
PF00149Metallophos 5.69
PF00821PEPCK_GTP 5.69
PF03695UPF0149 4.07
PF03466LysR_substrate 2.44
PF12850Metallophos_2 1.63
PF13411MerR_1 1.63
PF02810SEC-C 0.81
PF00486Trans_reg_C 0.81
PF02729OTCace_N 0.81
PF13416SBP_bac_8 0.81
PF14833NAD_binding_11 0.81
PF00437T2SSE 0.81
PF00376MerR 0.81
PF00850Hist_deacetyl 0.81
PF02525Flavodoxin_2 0.81
PF02472ExbD 0.81
PF07286D-Glu_cyclase 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 123 Family Scaffolds
COG1274Phosphoenolpyruvate carboxykinase, GTP-dependentEnergy production and conversion [C] 5.69
COG3079Uncharacterized conserved protein YgfB, UPF0149 familyFunction unknown [S] 4.07
COG0123Acetoin utilization deacetylase AcuC or a related deacetylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 1.63
COG0848Biopolymer transport protein ExbDIntracellular trafficking, secretion, and vesicular transport [U] 0.81
COG4336Uncharacterized conserved protein YcsI, UPF0317/DUF1446 familyFunction unknown [S] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.85 %
UnclassifiedrootN/A34.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002705|JGI25156J39149_1000143All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales52740Open in IMG/M
3300002705|JGI25156J39149_1036516All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales700Open in IMG/M
3300002705|JGI25156J39149_1037797Not Available681Open in IMG/M
3300003316|rootH1_10026305All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2518Open in IMG/M
3300003316|rootH1_10026313Not Available1461Open in IMG/M
3300003316|rootH1_10054861Not Available1102Open in IMG/M
3300003323|rootH1_10036464All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5392Open in IMG/M
3300003752|Ga0055539_1000277All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales29675Open in IMG/M
3300003752|Ga0055539_1005104All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1716Open in IMG/M
3300005327|Ga0070658_10030001All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales4369Open in IMG/M
3300005327|Ga0070658_10451682All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1107Open in IMG/M
3300005339|Ga0070660_100076057Not Available2629Open in IMG/M
3300005339|Ga0070660_100912956All Organisms → cellular organisms → Bacteria → Proteobacteria741Open in IMG/M
3300005364|Ga0070673_100011083All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales6144Open in IMG/M
3300005366|Ga0070659_100486075Not Available1051Open in IMG/M
3300005459|Ga0068867_100753971All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales864Open in IMG/M
3300005513|Ga0077120_1034132All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3354Open in IMG/M
3300005513|Ga0077120_1089535All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1389Open in IMG/M
3300005519|Ga0077119_10034316All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3923Open in IMG/M
3300005519|Ga0077119_10040761All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3408Open in IMG/M
3300005519|Ga0077119_10084523Not Available1840Open in IMG/M
3300005519|Ga0077119_10094676Not Available1670Open in IMG/M
3300005519|Ga0077119_10140811Not Available1189Open in IMG/M
3300005519|Ga0077119_10245975Not Available727Open in IMG/M
3300005519|Ga0077119_10274042Not Available661Open in IMG/M
3300005563|Ga0068855_100180924All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2383Open in IMG/M
3300005563|Ga0068855_101986409Not Available588Open in IMG/M
3300005577|Ga0068857_101088200All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales771Open in IMG/M
3300005616|Ga0068852_100407260All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1339Open in IMG/M
3300005616|Ga0068852_100973650Not Available867Open in IMG/M
3300005616|Ga0068852_101930037All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales613Open in IMG/M
3300006353|Ga0075370_10006350All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5936Open in IMG/M
3300009093|Ga0105240_10189035All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2423Open in IMG/M
3300009093|Ga0105240_11700805Not Available659Open in IMG/M
3300009148|Ga0105243_12203437All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae588Open in IMG/M
3300009174|Ga0105241_10609463Not Available987Open in IMG/M
3300009500|Ga0116229_10264267All Organisms → cellular organisms → Bacteria1462Open in IMG/M
3300009510|Ga0116230_10106082All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2398Open in IMG/M
3300009545|Ga0105237_12059785All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales580Open in IMG/M
3300009660|Ga0105854_1108491Not Available870Open in IMG/M
3300009660|Ga0105854_1256766All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales597Open in IMG/M
3300009709|Ga0116227_10066144All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3122Open in IMG/M
3300009709|Ga0116227_10074791All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2864Open in IMG/M
3300009709|Ga0116227_10238291All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1403Open in IMG/M
3300010371|Ga0134125_12635046Not Available547Open in IMG/M
3300011119|Ga0105246_10303446Not Available1290Open in IMG/M
3300013104|Ga0157370_11054279Not Available735Open in IMG/M
3300014168|Ga0181534_10879681Not Available534Open in IMG/M
3300014325|Ga0163163_10699361Not Available1077Open in IMG/M
3300015262|Ga0182007_10376829All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales537Open in IMG/M
3300017946|Ga0187879_10857625Not Available508Open in IMG/M
3300021170|Ga0210400_11033240All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales667Open in IMG/M
3300021405|Ga0210387_11006906Not Available730Open in IMG/M
3300021407|Ga0210383_11388810Not Available584Open in IMG/M
3300021432|Ga0210384_10000008All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales331856Open in IMG/M
3300021478|Ga0210402_11629408All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales572Open in IMG/M
3300022561|Ga0212090_10681642All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales652Open in IMG/M
3300022870|Ga0247782_1012729All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1089Open in IMG/M
3300022908|Ga0247779_1011307All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2831Open in IMG/M
3300025226|Ga0209674_100024All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales535481Open in IMG/M
3300025226|Ga0209674_114647Not Available694Open in IMG/M
3300025228|Ga0209672_103291All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3410Open in IMG/M
3300025231|Ga0207427_100531All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales19835Open in IMG/M
3300025253|Ga0209677_100793All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales15900Open in IMG/M
3300025256|Ga0209759_1000797All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales25577Open in IMG/M
3300025256|Ga0209759_1008637Not Available3157Open in IMG/M
3300025256|Ga0209759_1013818All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2166Open in IMG/M
3300025256|Ga0209759_1022305All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1418Open in IMG/M
3300025256|Ga0209759_1040735All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales803Open in IMG/M
3300025909|Ga0207705_10013889All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5807Open in IMG/M
3300025909|Ga0207705_10031978All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3758Open in IMG/M
3300025912|Ga0207707_10741024Not Available822Open in IMG/M
3300025919|Ga0207657_10024269All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5622Open in IMG/M
3300025919|Ga0207657_10532977All Organisms → cellular organisms → Bacteria → Proteobacteria919Open in IMG/M
3300025935|Ga0207709_11358673All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae588Open in IMG/M
3300025942|Ga0207689_10198106Not Available1657Open in IMG/M
3300025949|Ga0207667_10002941All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales21147Open in IMG/M
3300025949|Ga0207667_10397145All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1404Open in IMG/M
3300025949|Ga0207667_11427910All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales665Open in IMG/M
3300025960|Ga0207651_10002494All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales8776Open in IMG/M
3300026041|Ga0207639_10099681Not Available2345Open in IMG/M
3300026089|Ga0207648_10732877Not Available917Open in IMG/M
3300026121|Ga0207683_10798636All Organisms → cellular organisms → Bacteria876Open in IMG/M
3300026142|Ga0207698_11003329All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales845Open in IMG/M
3300027817|Ga0209112_10108348All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales903Open in IMG/M
3300028562|Ga0302151_10000085All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales54851Open in IMG/M
3300028666|Ga0265336_10000032All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales167925Open in IMG/M
3300028743|Ga0302262_10064026Not Available1267Open in IMG/M
3300028748|Ga0302156_10328013Not Available680Open in IMG/M
3300028762|Ga0302202_10270305All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales832Open in IMG/M
3300028765|Ga0302198_10140780All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1256Open in IMG/M
3300028783|Ga0302279_10001134All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales38598Open in IMG/M
3300028813|Ga0302157_10000042All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales146479Open in IMG/M
3300028865|Ga0302291_10228770All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales635Open in IMG/M
3300028882|Ga0302154_10526693Not Available560Open in IMG/M
3300029882|Ga0311368_10914751All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales586Open in IMG/M
3300029895|Ga0247043_1072718Not Available618Open in IMG/M
3300029896|Ga0247044_1049064All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales903Open in IMG/M
3300029907|Ga0311329_10559826All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria765Open in IMG/M
3300029951|Ga0311371_10171320All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3280Open in IMG/M
3300029987|Ga0311334_10455439Not Available1023Open in IMG/M
3300029989|Ga0311365_10236635All Organisms → cellular organisms → Bacteria1574Open in IMG/M
3300029989|Ga0311365_11440170Not Available592Open in IMG/M
3300030010|Ga0302299_10431148All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales670Open in IMG/M
3300030047|Ga0302286_10484527Not Available627Open in IMG/M
3300030051|Ga0302195_10273079Not Available755Open in IMG/M
3300030294|Ga0311349_10062389All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales3435Open in IMG/M
3300030339|Ga0311360_11016104All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales655Open in IMG/M
3300030520|Ga0311372_10002925All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales40840Open in IMG/M
3300030521|Ga0307511_10237603All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae893Open in IMG/M
3300030853|Ga0075372_10974698Not Available583Open in IMG/M
3300031521|Ga0311364_10670697All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1044Open in IMG/M
3300031572|Ga0318515_10636755Not Available566Open in IMG/M
3300031730|Ga0307516_10000803All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales43064Open in IMG/M
3300031730|Ga0307516_10247191All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1480Open in IMG/M
3300031730|Ga0307516_10630366All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales727Open in IMG/M
3300031736|Ga0318501_10113153All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1366Open in IMG/M
3300031747|Ga0318502_10026933All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2858Open in IMG/M
3300031902|Ga0302322_103844905Not Available513Open in IMG/M
3300032064|Ga0318510_10170562Not Available867Open in IMG/M
3300032074|Ga0308173_10161256Not Available1825Open in IMG/M
3300034170|Ga0370487_0000438All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales10333Open in IMG/M
3300034170|Ga0370487_0251911All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales592Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Arabidopsis RootHost-Associated → Plants → Roots → Epiphytes → Unclassified → Arabidopsis Root12.20%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere8.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil8.13%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen8.13%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog8.13%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere7.32%
Arabidopsis RootHost-Associated → Plants → Roots → Endophytes → Unclassified → Arabidopsis Root4.88%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated4.06%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza3.25%
Sugarcane Root And Bulk SoilHost-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil3.25%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.25%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.44%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.44%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.44%
CryconiteEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Cryconite1.63%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.63%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.63%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.63%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.63%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.81%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.81%
Glacier ValleyEnvironmental → Aquatic → Freshwater → Ice → Glacier → Glacier Valley0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002705Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMSHost-AssociatedOpen in IMG/M
3300003316Sugarcane root Sample L1Host-AssociatedOpen in IMG/M
3300003323Sugarcane root Sample H1Host-AssociatedOpen in IMG/M
3300003752Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2Host-AssociatedOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005513Combined assembly of arab plate scrape CL_Cvi (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005519Combined assembly of arab plate scrape CL_Col (Combined Assembly)Host-AssociatedOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300006353Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009510Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022561Borup_combined assemblyEnvironmentalOpen in IMG/M
3300022870Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L019-104C-5EnvironmentalOpen in IMG/M
3300022908Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5EnvironmentalOpen in IMG/M
3300025226Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025228Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025231Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025253Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025256Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes)Host-AssociatedOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027817Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300028562Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3EnvironmentalOpen in IMG/M
3300028666Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaGHost-AssociatedOpen in IMG/M
3300028743Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4EnvironmentalOpen in IMG/M
3300028748Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2EnvironmentalOpen in IMG/M
3300028762Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3EnvironmentalOpen in IMG/M
3300028765Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2EnvironmentalOpen in IMG/M
3300028783Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3EnvironmentalOpen in IMG/M
3300028813Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3EnvironmentalOpen in IMG/M
3300028865Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4EnvironmentalOpen in IMG/M
3300028882Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029895Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-C3aEnvironmentalOpen in IMG/M
3300029896Cryconite microbial communities from ice sheet in Tasiilaq, Greenland - TAS_L-C3bEnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300029987I_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300029989III_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030010Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4EnvironmentalOpen in IMG/M
3300030047Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3EnvironmentalOpen in IMG/M
3300030051Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2EnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300030339III_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300030853Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031730Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EMHost-AssociatedOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300034170Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25156J39149_100014383300002705Arabidopsis RootMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSEALGFDIPAEPTRAGKAAQAPGSSAAKQAQSI*
JGI25156J39149_103651623300002705Arabidopsis RootLRFLTWGTITAAVGSAVWLSSSDQAALFCSVGYRATSEAIGLEIPAEPSRAGSPSGLPGAGSAKQYQAEAG*
JGI25156J39149_103779723300002705Arabidopsis RootMRTMPLQFLTWGTITAAVGSAVWLSSEDQAAVFCSVGYRATSQAMGIEVPLPAEPTRAGPSAKLPGSSAAKQLQANAV*
rootH1_1002630523300003316Sugarcane Root And Bulk SoilMRTVQLHSLTWGTITAAIGCAVWLSSSDQAALFCSVGYRATSQAMGIDIPAEPTRAGKSAQSPGSGAARQMQAEAS*
rootH1_1002631323300003316Sugarcane Root And Bulk SoilMRTVQLHSLTWGTITAAIGCAVWLSSSDQAALFCSVGYRATSQAIGIDIPAEPTRAGKSAQSPGSGAARQMQAEAS*
rootH1_1005486133300003316Sugarcane Root And Bulk SoilMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSQAMGFDIPAEPTRAGKAAQAPGSSAARQPEAG*
rootH1_1003646453300003323Sugarcane Root And Bulk SoilMRTVQLHSLTWGTITAAIGCAVWLSSSDQAALFCSVGYRATSQAMGIDIPAEPPRAGKSAQSPGSGAARQMQAEAS*
Ga0055539_1000277293300003752Arabidopsis RootMRTVQLHSLTWGTITAAVGCAVWLSSSDQAALFCSVGYRATSQAMGIDIPAEPTRAGKSAQSAGSSAARQMQAEAG*
Ga0055539_100510423300003752Arabidopsis RootMRTMPLQFLTWGTITAAVGSAAWLSSIDQAAIFCSVGYRATSQAIGLDTPVEPTRAGPSAKNAGSHVAKQVAATAG*
Ga0070658_1003000143300005327Corn RhizosphereMRTMPLQLLTWGTVTAAVGSAVWLSNTDQAAVFCSVSYRATSSAMGLDDTLPAEPTRAGPSADTPGSAAARQVGAG*
Ga0070658_1045168223300005327Corn RhizosphereMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSVEVPGSSAARQVHAG*
Ga0070660_10007605743300005339Corn RhizosphereMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSSDVPGSSAARQVNAG*
Ga0070660_10091295613300005339Corn RhizosphereMRTTQLQSLTWGTVTAAVGCALWLSSTDQAALFCSVGYRATSQAMGFEIPAEPTHAGKAAKAPGSSAARQSPAGES*
Ga0070673_10001108373300005364Switchgrass RhizosphereMRTVPLQLLTWGTVVAAVGSAVWLSNTDQAAVLCSVSYRATSSAMGLDDPIPAEPTGAGPSSEMPGSSAARQVTAG*
Ga0070659_10048607513300005366Corn RhizosphereMRTMPLQLLTWGTVTAAVGSAVWLSNTDQAAVFCSVSYRATSSAMGLDDPLPAEPTRAGPSADTPGSSAARQVGAG*
Ga0068867_10075397123300005459Miscanthus RhizosphereMRTTQLQSLTWGTVTAAIGCALWLSSSDQAALFCSVGYRATSQAMCFDIPAEPTHAGKAAKAPGSSAARQAPAGEG*
Ga0077120_103413243300005513Arabidopsis RhizosphereMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSQAMGLDIPAEPTHAGKAAQAPGSSAARQANTI*
Ga0077120_108953533300005513Arabidopsis RhizosphereMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAILCSVGYRATSSAMGLDDALPSEPTRAGPPAEVPGSSAARQVNAG*
Ga0077119_1003431643300005519Arabidopsis RootMRTMPLQFLTWGTITAAVGSAVWLSSSDQAALFCSVGYRATSQAMGLEIPAEPTRAGKSVKLPGSGASRQLEANAS*
Ga0077119_1004076133300005519Arabidopsis RootMRTMPLRFLTWGTITAAVGSAVWLSSSDQAALFCSVGYRATSEAIGLEIPAEPSRAGSPSGLPGAGSAKQYQAEAG*
Ga0077119_1008452323300005519Arabidopsis RootMRTMPLQLLTWGTVTAAVGSAVWLSNTDQAAVFCSVGYRATSNAMGLDDTLPSEPTRAGPSAAVPGSSAAKQVNAS*
Ga0077119_1009467613300005519Arabidopsis RootMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSSDMPGSGAARQVNAG*
Ga0077119_1014081133300005519Arabidopsis RootMRTMPLQLLTWGTVTAAVVSAVWLSNTDQAAVFCAVSYRATSSAMGLDDPLPPEPTRAGPSADTPGSAAARQVGAG*
Ga0077119_1024597513300005519Arabidopsis RootMRTVPLQLLTWGTVAAAVGSAVWLSNTDQAAVLCSVSYRATSNAMGLDDPIPAEPTGAGPSAEMPGSSAARQVTAG*
Ga0077119_1027404223300005519Arabidopsis RootMRTMPLQFLTWGTITVAVGSTVWLSSSDQAALFCSVGYRATSQAMGLEIPAEPTRAGKAAKPSGSAVRRQLEATAG*
Ga0068855_10018092443300005563Corn RhizosphereMRITQLQSLTWGTVTAAVGCALWLSSTDQTALFCSVGYRATSQAMGLEIPAEPTHAGKAAKTPGSSAARQAQAGES*
Ga0068855_10198640923300005563Corn RhizosphereMRTMPLQLLTWGTVTAAVVSAVWLSNTDQAAVFCAVSYRATSSAMGLDDPLPTEPTRAGPSADTPGSAAARQVGAG*
Ga0068857_10108820023300005577Corn RhizosphereMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSEAMGFDIPPEPARAGKAAQAPGSSAARRAQAI*
Ga0068852_10040726023300005616Corn RhizosphereMRAMPLQLLTWGTIAAAVSSAVMLSSSNQKLVFCSVGYRATSQAIGLEIPVEPARAGAAAKPRAEPGKGVGTSAVRPI*
Ga0068852_10097365033300005616Corn RhizosphereMRAMPLQLLTWGTVTAAVGSAVWLSNTDEAAMLCSVGYRATSNAMGLDDVLPSEPTRAGPSSEVPGSSAARQMHAG*
Ga0068852_10193003713300005616Corn RhizosphereMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSVEVPGSSAARQVHAG*
Ga0075370_1000635063300006353Populus EndosphereMRATPLRFLTWGTITTAVGSAAWLSSADQAALFCSVGYRATSQAMGLEIPADPPRAGSPAKLSGSGVAKQSQAEAG*
Ga0105240_1018903523300009093Corn RhizosphereMEARASRHPHTLGAAAMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSVEVPGSSAARQVHAG*
Ga0105240_1170080523300009093Corn RhizosphereMRTVPLQLLTWGTVTAAVGCAVWLSNTDQAAVFCSVGYRATSSAMGLDDALPAEPARAGAPAQTPGSGAARQMNAG*
Ga0105243_1220343723300009148Miscanthus RhizosphereMRTMPLQFLTWGTITAAVGSAVWLSSSDQAALFCSVGYRATSQAMGLEIPAEPVRAGKSAKLPGSGAARELEANAS*
Ga0105241_1060946333300009174Corn RhizosphereMRITQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSQALGFDIPAEPTRAGKAAQAPGSSAARQAQ
Ga0116229_1026426723300009500Host-AssociatedMRTAPLRFLTWGPITAAVVSAAWLSSTDQAALFCSVGYRSTSRAIGIDIPSEPTRAGSSPKMRGTNETKQQLQASAS*
Ga0116230_1010608223300009510Host-AssociatedMRTVPLQFLTWGPITAAVVSAAWLSSTDQAALFCSVGYRSTSRAIGIDIPSEPTRGGSSPRTHRASDAKQQLQANAS*
Ga0105237_1205978523300009545Corn RhizosphereHPHTLGAAAMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSVEVPGSSAARQVHAG*
Ga0105854_110849123300009660Permafrost SoilMRTMPLQFLTWGTITAAVGSAVWLSSTDQGPVFCSVGYRATSRAMGIDIPEPTRAGHSATMPGSSAAKQLQASAS*
Ga0105854_125676613300009660Permafrost SoilRTMPLQFLTWGTITAAVGSAVWLTSTDQNAIFCSVGYRATSNALGIDIPLPTEPTRAGGSTKMPGSAAAKQLQASANQDSI*
Ga0116227_1006614433300009709Host-AssociatedMRTMPLQFLTWGTTTAAIGCAVWLSSADQGAVFCSVGYRATSQAMGIDLPLPTEPTRAGPAAKLPGSSAAKQLQASAV*
Ga0116227_1007479123300009709Host-AssociatedMRAMPLQLLTWGTITTAVSSAVWLSNADQAPVLCSVGYRATSRAIGVELPTEPTRAGHVIAPGSSAAKQMQASTV*
Ga0116227_1023829123300009709Host-AssociatedMRTVPLQFLTWGPITAAVVSAAWLSSTDQAALFCSVGYRSTSRAIGIDIPSEPTRAGSSPKMHGASDAKQQFQASAS*
Ga0134125_1263504613300010371Terrestrial SoilDLRRRGAATMRTMPLQLLTWGTVTAAVGSAVWLSNTDQAAVFCSVGYRATSSAMGLDDPLPAEPTRAGPSAETPGSAATRQVGAG*
Ga0105246_1030344613300011119Miscanthus RhizosphereMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSQAMGFEIPAEPARAGKAAKSPGS
Ga0157370_1105427923300013104Corn RhizosphereMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAVFCSVGYRATSNAMGLDDTLPSEPTRAGPSAAVPGSSAAKQMNAS*
Ga0181534_1087968123300014168BogMPLQFLTWGTITAAVGSAVWLSSTDQAAVFCSVGYRATSQAMGIDVPLTSEEPARAGPSAKMPGSGAARQLQANAG*
Ga0163163_1069936113300014325Switchgrass RhizosphereMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSQALGFDIPAEPTRVGKAAQAPGLSAAKQAQAI*
Ga0182007_1037682923300015262RhizosphereAVGSAAWLSSSDQAALFCSVGYRATSQAMGLDTPAEPSHGSSSRLNGAGAAKQFQAEAG*
Ga0187879_1085762513300017946PeatlandMRTMPLQFLTWGTVTAAVGSAVWLSSTDQGPLFCSVGYRATSRAMGIDIPLTTGPTRAGHSATMPGSSAVKQLQASAS
Ga0210400_1103324023300021170SoilMRAMPLQLLTWGTITAAVSSAAWLSSTDQRSILCSVGYRATSRAIGIDLPMPTEPTRAGPSATPGSGAAKQLQASAS
Ga0210387_1100690613300021405SoilMRTMPLQLLTWGTITAAVGSAVWLSSTDQAAVFCSVSYRATSRAMGMDIPVSTEPTRAGPSAKVRGSSAAKQLQASAS
Ga0210383_1138881013300021407SoilMRAMPLQLLTWGTIAAAVSSAAWLSSTDQASIFCSVGYRATSRAIGIDDLPLPTEPTRAGPSAKPGSSAAKQLQASAS
Ga0210384_100000082343300021432SoilMRTMPLQFLTWGTITAAVGSAVWLSSADQAAVFCSVGYRATSQAMGIDVPLPTEEPTRAGPSAKLPGSSAAKQLQANAG
Ga0210402_1162940813300021478SoilRTPLGAAAMRTMPLQFLTWGTVTAAVGSAVWLSNTDQAAVFCSVGYRATSSAMGIDIPLPTEPTRAGPSAKMPGSSAAKQQLQVNAS
Ga0212090_1068164213300022561Glacier ValleyVALSDNLGAAIMRTMPLQILTWGTITAAVGSAAWLASADQAAVFCSFGYRATSRAMGLDIPLPTEPTRAGPSAKLPGSSAAGQQLQATAS
Ga0247782_101272923300022870Plant LitterMRTMPLQFLTWGTITAAVGSAAWLASADQAAMFCSFGYRATSRAMGLEIPTEPTRAGPSSKVPGSGAARQELQVNAS
Ga0247779_101130743300022908Plant LitterMRAMPLQFLTWGTVTAAVGSAVWLSNTDQAAVFCSVGYRATSSAMGIDIPLPTEPTRAGPSAKAPGSSGAKRHAQVEAG
Ga0209674_100024613300025226Arabidopsis RootMRTVQLHSLTWGTITAAVGCAVWLSSSDQAALFCSVGYRATSQAMGIDIPAEPTRAGKSAQSAGSSAARQMQAEAG
Ga0209674_11464713300025226Arabidopsis RootMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSEALGFDIPAEPTRAGKAAQAPGSSAAKQAQSI
Ga0209672_10329123300025228Arabidopsis RootMRTMPLQFLTWGTITAAVGSAVWLSSEDQAAVFCSVGYRATSQAMGIEVPLPAEPTRAGPSAKLPGSSAAKQLQANAV
Ga0207427_10053173300025231Arabidopsis RhizosphereMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSQAMGLDIPAEPTHAGKAAQAPGSSAARQANTI
Ga0209677_100793113300025253Arabidopsis RootMRTMPLQFLTWGTITAAVGSAAWLSSIDQAAIFCSVGYRATSQAIGLDTPVEPTRAGPSAKNAGSHVAKQVAATAG
Ga0209759_100079743300025256Arabidopsis RootMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSSDMPGSGAARQVNAG
Ga0209759_100863733300025256Arabidopsis RootMRTMPLRFLTWGTITAAVGSAVWLSSSDQAALFCSVGYRATSEAIGLEIPAEPSRAGSPSGLPGAGSAKQYQAEAG
Ga0209759_101381843300025256Arabidopsis RootMRTMPLQFLTWGTITAAVGSAVWLSSSDQAALFCSVGYRATSQAMGLEIPAEPTRAGKSVKLPGSGASRQLEANAS
Ga0209759_102230513300025256Arabidopsis RootAATMRTMPLQLLTWGTVTAAVGSAVWLSNTDQAAVFCSVGYRATSNAMGLDDTLPSEPTRAGPSAAVPGSSAAKQVNAS
Ga0209759_104073513300025256Arabidopsis RootMRTMPLQFLTWGTITVAVGSTVWLSSSDQAALFCSVGYRATSQAMGLEIPAEPTRAGKAAKPSGSAVRRQLEATAG
Ga0207705_1001388963300025909Corn RhizosphereMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSVEVPGSSAARQVHAG
Ga0207705_1003197833300025909Corn RhizosphereMRTMPLQLLTWGTVTAAVGSAVWLSNTDQAAVFCSVSYRATSSAMGLDDTLPAEPTRAGPSADTPGSAAARQVGAG
Ga0207707_1074102433300025912Corn RhizosphereMRTTQLQSLTWGTVTAAVGCALWLSSTDQAALFCSVGYRATSKAMGFEIPAEPTHAGKAAKAPGSSAARQ
Ga0207657_1002426953300025919Corn RhizosphereMRAMPLQLLTWGTVTAAVGSAVWLSNTDQAAMLCSVGYRATSNAMGLDDALPSEPTRAGPSSDVPGSSAARQVNAG
Ga0207657_1053297723300025919Corn RhizosphereMRTTQLQSLTWGTVTAAVGCALWLSSTDQAALFCSVGYRATSQAMGFEIPAEPTHAGKAAKAPGSSAARQSPAGES
Ga0207709_1135867313300025935Miscanthus RhizosphereMRTMPLQFLTWGTITAAVGSAVWLSSSDQAALFCSVGYRATSQAMGLEIPAEPVRAGKSAKLPGSGAARELEANAS
Ga0207689_1019810643300025942Miscanthus RhizosphereMRATQLQSLTWGTVTAAIGCAVWLSSSDQPALFCSVGYRATSQAMGLDIPAEPTHAGKAAQAPGSS
Ga0207667_10002941113300025949Corn RhizosphereMRITQLQSLTWGTVTAAVGCALWLSSTDQTALFCSVGYRATSQAMGLEIPAEPTHAGKAAKTPGSSAARQAQAGES
Ga0207667_1039714523300025949Corn RhizosphereMRTMPLQLLTWGTVTAAIVSAVWLSNTDQAAVFCSVGYGATSSAMGLDVPLPAEPTRAGPSADTPGSAAARQVGAG
Ga0207667_1142791023300025949Corn RhizosphereMRTMPLQLLTWGTVTAAVVSAVWLSNTDQAAVFCAVSYRATSSAMGLDDPLPTEPTRAGPSADTPGSAAARQVGAG
Ga0207651_1000249493300025960Switchgrass RhizosphereMRTVPLQLLTWGTVVAAVGSAVWLSNTDQAAVLCSVSYRATSSAMGLDDPIPAEPTGAGPSSEMPGSSAARQVTAG
Ga0207639_1009968113300026041Corn RhizosphereMRTTQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSEALGFDIPAEPTRAGKAAQAPGSSAAKQAQS
Ga0207648_1073287733300026089Miscanthus RhizosphereMRTTQLQSLTWGTVTAAIGCALWLSSSDQAALFCSVGYRATSQAMCFDIPAEPTHAGKAAKAPGSSAARQAPAGEG
Ga0207683_1079863623300026121Miscanthus RhizosphereMRTTQLQTLTWGTVIAAIGCAVWLSSSDQAALFCSVGYRATSQAMGFEIPAEPTHAGKAAKAPGSSAARQSPAGES
Ga0207698_1100332913300026142Corn RhizosphereMRAMPLQLLTWGTIAAAVSSAVMLSSSNQKLVFCSVGYRATSQAIGLEIPVEPARAGAAAKPRAEPGKGVGTSAVRPI
Ga0209112_1010834823300027817Forest SoilMRTMPLQFLTWGTVTAAVVSAVWLSNIDQAAVFCSVGYRATSSAMGLDIPLPTEPTRAGPSATMPGSSAAKQVQVNAS
Ga0302151_10000085453300028562BogMHTLPLRFLTWGTTTAAVGCAVWLSSADQGAVFCSVGYRATSQAMGIDLPTEPTRAGHSAKLPGSSAAKQLQASAI
Ga0265336_10000032453300028666RhizosphereMRTMPLQLLTWGTITSAVGSAVWLSSADQSAMFCSVGYRATSQAMGIVVPTEPTRAGPSAKVPVSGASRQLQASAG
Ga0302262_1006402613300028743FenMRTLPVQLLTWGTIACSISSAVWLSSTDQGAMFCLIGYRATSRAIGIDLPLPTDPTRAGAPKTPGSSASGQFPAAAS
Ga0302156_1032801323300028748BogMHTLPLRFLTWGTTTAAVGCAVWLSSADQGAVFCSVGYRATSQAMGIDLPTEPTRAGPSAKLPGSSAAKQLQA
Ga0302202_1027030523300028762BogMRTMPLQFLTWGTITAAVGSAVWLSSTDQGPVFCSVGYRATSRAMGIDIPLTTEPTRAGHSATVPGSSAAKQLQASAS
Ga0302198_1014078013300028765BogMRTMPLQFLTWGTITASVGSAVWLSSTDQDPVFCSVGYRATSRAMGIDIPLTTEPTRAGHSATVPGSSAAKQLQASAS
Ga0302279_10001134143300028783BogMRTMPLQFLTWGTITAAVGSAVWLSSADQGAVFCSVGYRATSRAMGIDIPLPTEPTRAGPSATTPGSSAARQQLQANAG
Ga0302157_10000042703300028813BogMHTLPLRFLTWGTTTAAVGCAVWLSSADQGAVFCSVGYRATSQAMGIDLPTEPTRAGPSAKLPGSSAAKQLQASAI
Ga0302291_1022877023300028865FenLLTWGTIACSISSAVWLSSTDQGAMFCLIGYRATSRAIGIDLPLPTDPTRAGAPKTPGSSASGQFPAAAS
Ga0302154_1052669313300028882BogMRTMPLQFLTWGTITAAVGSAVWLSSTDQAAFFCSVGYRATSRAMGLDIPLPTEPTRAGPSAKEPGSSAAKQLQASAG
Ga0311368_1091475113300029882PalsaPDTRGVATMRTMPLQFLTWGTITAAVGSAVWLSSTDQGPVFCSVGYRATSRAMGIDIPEPTRAGHSATMPGSSAAKQLQASAS
Ga0247043_107271823300029895CryconiteMRTMPLQFLTWGTITAAVGSAVWLSSTDQGAVFCSVGYRATSRAMGVDIALPLEPTRAGHLATKPGSSAAKQLQAAAN
Ga0247044_104906423300029896CryconiteMRTMPLQILTWGTITAAVGSAAWLASADQAAVFCSFGYRATSRAMGLDIPLPTEPTRAGPSAKLPGSSAARQQLQANAS
Ga0311329_1055982623300029907BogMRTVPLQFLTWGPITAAVVSAAWLSSTDQAALFCSVSYRATSRAIGIDIPSEPTRAGSSPKMHGASDAKQQFEASAS
Ga0311371_1017132023300029951PalsaMRTMPLQFLTWGTITAAVGSAVWLSSTDQAAVFCSVGYRATSSAMGIDTPLPAEPTRAGPSAKVPGSSAAKQFQANAS
Ga0311334_1045543913300029987FenMRTMPLQLLTWGTITAAVGSAAWLTSTDQGAVFCSVGYRATSQAMGLEIPLPTEPTRAGRSVKGAGSGAAKQLQASAI
Ga0311365_1023663533300029989FenMRTMPLQFLTWGTITVAVGSAVWLSSSDQAAVFCSFGYRSTSQAMGIDAALPTEATRAGTPARHSSASKLSPPSDS
Ga0311365_1144017013300029989FenMRAMPIQLLTWGTITAAVSSAVWLSSTDQGAIFCSVGYRATSGAIGIDIPLPAEPARAGHSSKMPGSSASGQFQASAS
Ga0302299_1043114823300030010FenTWGTIACSISSAVWLSSTDQGAMFCLIGYRATSRAIGIDLPLPTDPTRAGAPKTPGSSASGQFPAAAS
Ga0302286_1048452713300030047FenMRTMPLQFLTWGTITAAIGSAAWLTSTDQGAVFCSVGYRSTSQAMGLEIPLTTEPARAGRSVKGAGSGAAKQLQASAS
Ga0302195_1027307923300030051BogMRTMPLQFLTWGTITASVGSAVWLSSTDQDPVFCSVGYRATSRAMGIDIPLRTEPTRAGHSATMPGSSAAKQLQASAG
Ga0311349_1006238943300030294FenMRTMPLQFLTWGTITAAIGSAAWLTSTDQGAVFCSVGYRSTSQAMGLEIPLATEPARAGRSAKGAGSGAAKQLQASAG
Ga0311360_1101610423300030339BogMRTMPLQLLTWGTITVAVGSAVWLSSSDQAAVFCSFGYRSTSQAMGIDAALPTEATRAGTPARHSSASKLSPPSDS
Ga0311372_10002925233300030520PalsaMRTMPLQLLTWGTITAAVGSAVWLSNTDQAAVFCSVGYRATSSAMGIDIPLPTEPTRAGPSAKMPGSGAAKQVQAVAG
Ga0307511_1023760333300030521EctomycorrhizaMRTMPLQFLTWGTITAAVGSAVWLSSSDQAALFCSVGYRATSQAMGLDIPLSTEPARAGKSAKLPGSGAARQLEANAS
Ga0075372_1097469813300030853SoilRTMPLQFLTWGTITAAVGSAVWLSSTDQAAVFCSVGYRATSQAMGIEVPLPTEPSRAGPSARLPGSSAARQLQANAV
Ga0311364_1067069713300031521FenRSNRACKRRTLGHLGAAIMRTMPLQFLTWGTITAAIGSAAWLTSTDQGAVFCSVGYRSTSQAMGLEIPLTTEPARAGRSVKGAGSGAAKQLQASAS
Ga0318515_1063675513300031572SoilMRTSQLQSLTWGTVTAAIGCAVWLSSSDQAALFCSVGYRATSQAMGFEIPEEPTRAGKAAQAPGSSASRQLQSQAS
Ga0307516_10000803133300031730EctomycorrhizaMRTIPLQFLTWGTITAAVGSAVWLCSADQAAVFCSFGYRSTSQAMGIEIPLPAEATRSGTSGRASGARAAKQLHASAS
Ga0307516_1024719123300031730EctomycorrhizaMRTMPLQFLTWGTVTAAVGSAVWLSSSDQAAVFCSFGYRSTSQAMGIDTPLPTEATRAGTPARHSSASKLSPPSDS
Ga0307516_1063036623300031730EctomycorrhizaMPLQFLTWGTITAAVGSAVWLCSADQAAVFCSFGYRSTSQAMGIEVPPPAEATRAGTSGSTSGSRAVKQLQASAS
Ga0318501_1011315323300031736SoilMRSTQLQSLTWGTVTAAVGCAVWLSSTDQAALFCSVGYRATSQAMGLEIPAEPTRAGVPAKLPGSSAARQLQAQAG
Ga0318502_1002693323300031747SoilMPWVQQRTHAANSGAAMRSTQLQSLTWGTVTAAVGCAVWLSSTDQAALFCSVGYRATSQAMGLEIPAEPTRAGVPAKLPGSSAARQLQAQAG
Ga0302322_10384490513300031902FenMRVLSLQLLTWGTATAAISSAVWLSSTDQASVFCSIGYRATSQALGIEVPLPAEPTRAGASAVPGSHASTAQGPTS
Ga0318510_1017056213300032064SoilMRSTQLQSLTWGTVTAAVGCAVWLSSTDQAALFCSVGYRATSQAMGFEIPAEPTRAGKAAQAPGSSASRQ
Ga0308173_1016125623300032074SoilMRAMPLRFLTWGTITFAVGSAAWLSSSDQGALFCSVGYRATSRALGFDVPLSTEAVRAKALKGASAAAPRLEADAS
Ga0370487_0000438_3437_36733300034170Untreated Peat SoilMRTMPLQFLTWGTVTAAVGSAVWLSSLDQGPVFCSVGYRATSRAMGIDIPLPAEPTRAGPSAQMPGSSAARQLQATAS
Ga0370487_0251911_1_2073300034170Untreated Peat SoilLTWGTITSAVGSAVWLSSADQSAMFCSVGYRATSQAMGIVVPTEPTRAGPSAKVPVSGASRQLQASAG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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