Metagenome / Metatranscriptome Family F071206

Basic Information
Family ID	F071206
Family Type	Metagenome / Metatranscriptome
Number of Sequences	122
Average Sequence Length	51 residues
Representative Sequence	DNALIARKFRALGFSGVRVSGAGAIRRVEGVWPRKDASATLPPQIVAVAGL
Number of Associated Samples	109
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.28 %
% of genes near scaffold ends (potentially truncated)	95.90 %
% of genes from short scaffolds (< 2000 bps)	92.62 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Most Common Taxonomy
Group	Bacteria (54.918 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.951 % of family members)
Environment Ontology (ENVO)	Unclassified (31.967 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.262 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.92% β-sheet: 13.92% Coil/Unstructured: 72.15%
Feature Viewer

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Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF00383	dCMP_cyt_deam_1	8.20
PF00912	Transgly	2.46
PF17201	Cache_3-Cache_2	2.46
PF00487	FA_desaturase	1.64
PF14497	GST_C_3	1.64
PF14437	MafB19-deam	1.64
PF03776	MinE	1.64
PF08241	Methyltransf_11	0.82
PF13406	SLT_2	0.82
PF00011	HSP20	0.82
PF02586	SRAP	0.82
PF14023	DUF4239	0.82
PF04545	Sigma70_r4	0.82
PF00440	TetR_N	0.82
PF04546	Sigma70_ner	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	2.46
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	2.46
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	2.46
COG0851	Septum formation topological specificity factor MinE	Cell cycle control, cell division, chromosome partitioning [D]	1.64
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	1.64
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	1.64
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.82
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.82
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.82

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.92 %
Unclassified	root	N/A	45.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.92 %
Unclassified	root	N/A	45.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.92 %
Unclassified	root	N/A	45.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.08 %
Unclassified	root	N/A	45.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.31 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.08 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	5.74 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	5.74 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.82 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.08 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	5.74 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.74 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	1.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.82 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.82 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.08 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.74 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	4.92 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.64 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.82 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.82 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.08 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.74 %
Methylobacterium sp. B34	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	4.92 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1.64 %
Ensifer psoraleae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer psoraleae	0.82 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.82 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.82 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.82 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002077\|JGI24744J21845_10100195	Not Available	535	Open in IMG/M
3300002245\|JGIcombinedJ26739_100634946	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300004114\|Ga0062593_103513249	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300004156\|Ga0062589_100731635	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300004157\|Ga0062590_100770154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880	Open in IMG/M
3300004463\|Ga0063356_103601273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300004479\|Ga0062595_102225424	Not Available	538	Open in IMG/M
3300004481\|Ga0069718_16024066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	940	Open in IMG/M
3300005332\|Ga0066388_102044564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1029	Open in IMG/M
3300005343\|Ga0070687_101440699	Not Available	516	Open in IMG/M
3300005438\|Ga0070701_10602835	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300005456\|Ga0070678_101619207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300005457\|Ga0070662_100584001	Not Available	939	Open in IMG/M
3300005549\|Ga0070704_101735941	Not Available	577	Open in IMG/M
3300005563\|Ga0068855_101878538	Not Available	607	Open in IMG/M
3300005614\|Ga0068856_102117615	Not Available	572	Open in IMG/M
3300005841\|Ga0068863_100234615	Not Available	1770	Open in IMG/M
3300005843\|Ga0068860_100191257	All Organisms → cellular organisms → Bacteria	1981	Open in IMG/M
3300005937\|Ga0081455_10024840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5539	Open in IMG/M
3300005952\|Ga0080026_10092491	Not Available	835	Open in IMG/M
3300006050\|Ga0075028_100968200	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006057\|Ga0075026_100957640	Not Available	530	Open in IMG/M
3300006086\|Ga0075019_10140306	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300006605\|Ga0074057_12225675	All Organisms → cellular organisms → Bacteria → Proteobacteria	1030	Open in IMG/M
3300006845\|Ga0075421_100977925	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300009094\|Ga0111539_11016642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	964	Open in IMG/M
3300009094\|Ga0111539_11863248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	697	Open in IMG/M
3300009147\|Ga0114129_13338409	Not Available	518	Open in IMG/M
3300009148\|Ga0105243_11775934	Not Available	647	Open in IMG/M
3300009156\|Ga0111538_11761402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300009156\|Ga0111538_12569828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300009157\|Ga0105092_10055936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2123	Open in IMG/M
3300009174\|Ga0105241_12112095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	557	Open in IMG/M
3300009545\|Ga0105237_10910564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	886	Open in IMG/M
3300009551\|Ga0105238_12533465	Not Available	549	Open in IMG/M
3300009553\|Ga0105249_11787555	Not Available	687	Open in IMG/M
3300009792\|Ga0126374_11606236	Not Available	537	Open in IMG/M
3300010046\|Ga0126384_12302833	Not Available	520	Open in IMG/M
3300010375\|Ga0105239_13428972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	515	Open in IMG/M
3300010396\|Ga0134126_11289436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300010400\|Ga0134122_10056383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3027	Open in IMG/M
3300010400\|Ga0134122_10311964	Not Available	1355	Open in IMG/M
3300010400\|Ga0134122_11082773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300012004\|Ga0120134_1046703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	744	Open in IMG/M
3300012513\|Ga0157326_1051705	Not Available	605	Open in IMG/M
3300012884\|Ga0157300_1080757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300012905\|Ga0157296_10213137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300012911\|Ga0157301_10081559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	911	Open in IMG/M
3300012913\|Ga0157298_10042367	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012951\|Ga0164300_10012212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2745	Open in IMG/M
3300012951\|Ga0164300_10743666	Not Available	600	Open in IMG/M
3300012955\|Ga0164298_10890061	Not Available	646	Open in IMG/M
3300012957\|Ga0164303_10035383	Not Available	2094	Open in IMG/M
3300012958\|Ga0164299_11085762	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300012960\|Ga0164301_10843549	Not Available	705	Open in IMG/M
3300012960\|Ga0164301_10969665	Not Available	666	Open in IMG/M
3300012961\|Ga0164302_10152459	All Organisms → cellular organisms → Bacteria → Proteobacteria	1363	Open in IMG/M
3300012961\|Ga0164302_10373343	Not Available	962	Open in IMG/M
3300012961\|Ga0164302_11401196	All Organisms → cellular organisms → Bacteria → Proteobacteria	571	Open in IMG/M
3300012984\|Ga0164309_11111121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	658	Open in IMG/M
3300012984\|Ga0164309_11798674	Not Available	525	Open in IMG/M
3300012987\|Ga0164307_11701899	Not Available	534	Open in IMG/M
3300012988\|Ga0164306_10054905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer psoraleae	2425	Open in IMG/M
3300012989\|Ga0164305_12241231	Not Available	503	Open in IMG/M
3300013096\|Ga0157307_1033398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	904	Open in IMG/M
3300013297\|Ga0157378_12367053	Not Available	583	Open in IMG/M
3300013306\|Ga0163162_12847336	Not Available	557	Open in IMG/M
3300013308\|Ga0157375_11002386	Not Available	975	Open in IMG/M
3300015200\|Ga0173480_10549457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300015372\|Ga0132256_100163459	All Organisms → cellular organisms → Bacteria	2247	Open in IMG/M
3300018469\|Ga0190270_10577144	Not Available	1090	Open in IMG/M
3300018469\|Ga0190270_10862335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300018476\|Ga0190274_11569997	Not Available	750	Open in IMG/M
3300019356\|Ga0173481_10220108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300022756\|Ga0222622_11077683	Not Available	591	Open in IMG/M
3300022901\|Ga0247788_1090191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	599	Open in IMG/M
3300023057\|Ga0247797_1024029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	800	Open in IMG/M
3300025899\|Ga0207642_11125357	Not Available	508	Open in IMG/M
3300025901\|Ga0207688_10198202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	1203	Open in IMG/M
3300025918\|Ga0207662_10371057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	965	Open in IMG/M
3300025933\|Ga0207706_11668417	Not Available	514	Open in IMG/M
3300025937\|Ga0207669_11597561	Not Available	556	Open in IMG/M
3300025937\|Ga0207669_11859901	Not Available	514	Open in IMG/M
3300025938\|Ga0207704_11585308	Not Available	562	Open in IMG/M
3300025942\|Ga0207689_10675796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	870	Open in IMG/M
3300025949\|Ga0207667_11235832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	725	Open in IMG/M
3300025960\|Ga0207651_11837583	Not Available	545	Open in IMG/M
3300025961\|Ga0207712_10943716	Not Available	764	Open in IMG/M
3300025981\|Ga0207640_12125502	Not Available	509	Open in IMG/M
3300026035\|Ga0207703_12348221	Not Available	509	Open in IMG/M
3300026075\|Ga0207708_11411925	Not Available	611	Open in IMG/M
3300026078\|Ga0207702_10466783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1227	Open in IMG/M
3300026089\|Ga0207648_11616674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300026118\|Ga0207675_101077342	Not Available	823	Open in IMG/M
3300026121\|Ga0207683_11678587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300026142\|Ga0207698_11054127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	825	Open in IMG/M
3300027743\|Ga0209593_10334582	Not Available	517	Open in IMG/M
3300027907\|Ga0207428_11089522	Not Available	559	Open in IMG/M
3300027909\|Ga0209382_10112269	All Organisms → cellular organisms → Bacteria	3184	Open in IMG/M
3300028381\|Ga0268264_12492174	Not Available	523	Open in IMG/M
3300028828\|Ga0307312_11150670	Not Available	513	Open in IMG/M
3300030019\|Ga0311348_10770082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	717	Open in IMG/M
3300031170\|Ga0307498_10019267	All Organisms → cellular organisms → Bacteria → Proteobacteria	1529	Open in IMG/M
3300031184\|Ga0307499_10056875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	975	Open in IMG/M
3300031364\|Ga0307445_10199866	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300031446\|Ga0170820_12230410	Not Available	1567	Open in IMG/M
3300031538\|Ga0310888_10256422	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300031565\|Ga0307379_10160295	Not Available	2351	Open in IMG/M
3300031565\|Ga0307379_11590472	Not Available	515	Open in IMG/M
3300031768\|Ga0318509_10487419	Not Available	689	Open in IMG/M
3300031908\|Ga0310900_10251140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	1274	Open in IMG/M
3300031944\|Ga0310884_10093083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1460	Open in IMG/M
3300032012\|Ga0310902_10329519	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300032179\|Ga0310889_10163972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. B34	1005	Open in IMG/M
3300032180\|Ga0307471_102136468	Not Available	704	Open in IMG/M
3300032205\|Ga0307472_100528837	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300032516\|Ga0315273_12132314	Not Available	660	Open in IMG/M
3300033004\|Ga0335084_10766661	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300033416\|Ga0316622_102646377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300033551\|Ga0247830_11192868	Not Available	608	Open in IMG/M
3300033551\|Ga0247830_11254568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	592	Open in IMG/M
3300034077\|Ga0373899_018345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.48%
Host-Associated	Host-Associated	37.70%
Engineered	Engineered	0.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.10%
Plants	Host-Associated → Plants	37.70%
Aquatic	Environmental → Aquatic	7.38%
Bioremediation	Engineered → Bioremediation	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.85%
Freshwater	Environmental → Aquatic → Freshwater	3.28%
Sediment	Environmental → Aquatic → Sediment	3.28%
Marine	Environmental → Aquatic → Marine	0.82%
Peat	Environmental → Terrestrial → Peat	0.82%
Metal	Engineered → Bioremediation → Metal	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.93%
Loam	Environmental → Terrestrial → Soil → Loam	5.74%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.28%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.46%
Clay	Environmental → Terrestrial → Soil → Clay	1.64%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.64%
Lake	Environmental → Aquatic → Freshwater → Lake	0.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.82%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.28%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.64%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.64%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.82%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.82%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.10%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.28%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.28%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.28%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.64%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.64%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.82%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.82%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.82%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.82%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.82%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.82%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.82%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.82%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.82%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.82%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031364	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-30	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034077	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24744J21845_101001951	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	TSVRVSGSGAKRKVEGVWPGKDMSANLPRQIVAVAKL*
JGIcombinedJ26739_1006349462	3300002245	Forest Soil	KSVELLADNALIAQKFRDLGFSRVRVSGAGATRRVEGVWPGRDTSANMPPQIVAVAAL*
Ga0062593_1035132492	3300004114	Soil	DNELIARKFRALGFSRVRVSGAGATRRVEGVWPGKDTSASMPPQIVAVAKL*
Ga0062589_1007316351	3300004156	Soil	DNALIARKFRALGFSKVRVSGTGAIRLVEGVWPRKDASAPLPPQIVAVAVI*
Ga0062590_1007701541	3300004157	Soil	TLSLNSVERLADNNLIERKFRALGFSGVRVSGTGAIRRVEGVWPRKDASAPLPPQIVAVARL*
Ga0063356_1036012732	3300004463	Arabidopsis Thaliana Rhizosphere	ADNALIARKFRALGFSGVRVSGAGAIRRVEGVWPRKDASATLPPQIIAVAGL*
Ga0062595_1022254241	3300004479	Soil	LADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0069718_160240661	3300004481	Sediment	DNELIARKFRALGFAKVRVSGSGATRKVEGVWPGKDASAPLPRQIVAVARM*
Ga0066388_1020445641	3300005332	Tropical Forest Soil	LNSVERLADNAQIARKFRALGFTSVHVSGTGAMRRVEGVWHHKDASTTLPRQIVAVAGL*
Ga0070687_1014406992	3300005343	Switchgrass Rhizosphere	VDNGAIAQKFRALGFTSVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL*
Ga0070701_106028351	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LGFSKVRVSGTGAIRLVEGVWPRKDASAPLPPQIVAVAVI*
Ga0070678_1016192071	3300005456	Miscanthus Rhizosphere	LADNELIARKFRALGFARVHVSGSGATRKVEGVWPGKDASAPLPRQIVAVARM*
Ga0070662_1005840013	3300005457	Corn Rhizosphere	KFRALGFSKVHVSGSGATRRVEGVWPGKDVSTPLPSQIVAVAKL*
Ga0070704_1017359411	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RALGFSGVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0068855_1018785382	3300005563	Corn Rhizosphere	VDNASIAQKFRALGFTSVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL*
Ga0068856_1021176151	3300005614	Corn Rhizosphere	VERLVDNGAIAQKFRALGFTSVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL*
Ga0068863_1002346155	3300005841	Switchgrass Rhizosphere	VERLVDNDLIARKFRALGFSKVRVSGAGAIRRVEGVWPREDASASLPRQIVAVARL*
Ga0068860_1001912575	3300005843	Switchgrass Rhizosphere	SVERLVDNGAIAQKFRALGFTSVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL*
Ga0081455_100248401	3300005937	Tabebuia Heterophylla Rhizosphere	IEKFADNALIAQKFRSLGFARVRVSGAGATRRVEGVWIGKDVRGNMPAQIVAVANL*
Ga0080026_100924912	3300005952	Permafrost Soil	QLADNGTIAQKFRDLGFSGVRVSGSGATRRVVGVWPGKDTRANMPPQIVAVASL*
Ga0075028_1009682001	3300006050	Watersheds	KFRAMGFMRVRVSGAGATRRVEGVWPGKDTSANLPPQIVAVAGL*
Ga0075026_1009576402	3300006057	Watersheds	LADNALIASKFRALGFSRVHVSGTGAIRRIEGVWHRKDASATLPRQIVAVGLSSGSM*
Ga0075019_101403061	3300006086	Watersheds	TRVRVSGAGAMRRVEGVWPGKDTSANLPPQIVAVAGL*
Ga0074057_122256751	3300006605	Soil	SVRVSGSGATRKVEGVWPGKDMSANMPRQIVAVARL*
Ga0075421_1009779251	3300006845	Populus Rhizosphere	VERLADNALIARKFRALGFSKVRVSGTGAIRLVEGVWPRKDASAPLPPQIVAVAVI*
Ga0111539_110166421	3300009094	Populus Rhizosphere	RLADNALIARKFRALGFSKVRVSGAGAVRRVEGIWHRKDASATLPRQIVAVARL*
Ga0111539_118632481	3300009094	Populus Rhizosphere	SLNAVERLTDNALIARKFRAIGFSKVRVSGSGAVRRVEGVWSRKDASTTLPRQIVAVARL
Ga0114129_133384092	3300009147	Populus Rhizosphere	SGVRVSGAGAIRRVEGVWPRKDASATLPPQIVAVAGL*
Ga0105243_117759341	3300009148	Miscanthus Rhizosphere	GFSKVHVSGSGATRRVEGVWPGKDVSTPLPSQIVAVAKL*
Ga0111538_117614022	3300009156	Populus Rhizosphere	ALIAKKFRALGFSRVHVSGTGAMRRVEGVWHRKDANATLPRQIVAVAGL*
Ga0111538_125698281	3300009156	Populus Rhizosphere	SVERLADNELIARKFRALGFARVHVSGSGATRKVEGVWPGKDASAPLPRQIVAVARM*
Ga0105092_100559363	3300009157	Freshwater Sediment	MLSLNSVKRLADNALIASKFRAIGFSKVRVSGAGAVRHVEGVWPRKDASTNLPPQIIAVAGL*
Ga0105241_121120951	3300009174	Corn Rhizosphere	KFRALGFSGVRVSGTGATRRVEGVWPRKDASAPLPPQIVAVARL*
Ga0105237_109105641	3300009545	Corn Rhizosphere	SKFRALGFSGVRVSGTGATRRVEGVWPRKDASAPLPPQIVAVARL*
Ga0105238_125334651	3300009551	Corn Rhizosphere	VERLAGNAQIAQKFRALGFVSVRVAGSGAKRRVEGVWPGKETSANLPRQIVAVAKL*
Ga0105249_117875551	3300009553	Switchgrass Rhizosphere	NALIARKFRALGFSKVRVSGAGAVRRVEGVWHRKDASTTLPRQIVTVAGL*
Ga0126374_116062361	3300009792	Tropical Forest Soil	LNSVEQLADNALIARKFRALGFSRVHVSGSGATRRVEGVWPGKDASATMPPQIVAVAGL*
Ga0126384_123028331	3300010046	Tropical Forest Soil	RAILSLKSMERLVDNTLIAQKFRDLGFTGVRVSGAGAMRRVEGIWPGKDTSATLPPQIVAVAKL*
Ga0105239_134289721	3300010375	Corn Rhizosphere	QLADNALIARKFRALGFSRVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL*
Ga0134126_112894361	3300010396	Terrestrial Soil	FRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0134122_100563836	3300010400	Terrestrial Soil	RALGFVSVRVSGSGATRKVEGVSPGKETSANLPRQNVAVARL*
Ga0134122_103119644	3300010400	Terrestrial Soil	TLALNSVEQLADNALIARKFRALGFSRVRVSGTGAKRRVEGVWHLKDASTTLLRQIVAVAGL*
Ga0134122_110827731	3300010400	Terrestrial Soil	LALNSVEQLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWHRKDASATLPRQIVAVAGL*
Ga0120134_10467031	3300012004	Permafrost	LHLNSVERLVDNALIESKFRALGFSGVRVSGTGATRRVEGVWPRNDASAPLPPQIVAVARL*
Ga0157326_10517051	3300012513	Arabidopsis Rhizosphere	ATLSLNSVERLADNALIARKFRALGFSKVRVSGAGPVRRVEGVWHRKDASATLPRQIVAVASL*
Ga0157300_10807571	3300012884	Soil	FRALGFSKVHVLGSGATRRVEGVWPRKNARTPLPSQVVAVARV*
Ga0157296_102131371	3300012905	Soil	KSVERLADNELIARKFRALGFAKVRVSGSGATRKVEGVWPGKDASAPLPHQIVAVARM*
Ga0157301_100815591	3300012911	Soil	LIESKFRALGFSGVRVSGTGATRRVEGVWPRKDASAPLPPQIVAVARL*
Ga0157298_100423672	3300012913	Soil	SVERLADNALIARKFRALGFSKVRVSGTGAIRLVEGVWPRKDASAPLPPQIVGVARL*
Ga0164300_100122121	3300012951	Soil	QKFRDLGFAGVKVSGAGATRRVEGVWPGKDTSANMPPQIVAVAKL*
Ga0164300_107436661	3300012951	Soil	ELIARKFRALGFSKVHVSGSGATRRVEGVWPGKDVSTPLPSQIVAVAKL*
Ga0164298_108900611	3300012955	Soil	ADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFHKDASATLPRQIVAVDGL*
Ga0164303_100353833	3300012957	Soil	LADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVDGL*
Ga0164299_110857621	3300012958	Soil	RAILALRSMERLVDNALIAQKSRDLGFAGVKVSGAGATRRVEGVWPGKDTSANMPPQIVAVAKL*
Ga0164301_108435491	3300012960	Soil	YCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRAEGLWLRKDATAPLPHQIVEVAKL*
Ga0164301_109696651	3300012960	Soil	YCATLALNSVERLADNALIARKFRALGFSRVRVSGTGAMRRVEGVWFRKDASATLPRQIVAVDGL*
Ga0164302_101524592	3300012961	Soil	MERLVDNPLIAQKFRDLGFAGVKVSGAGATRRVEGVWPGKDTSANMPPQIVAVAKL*
Ga0164302_103733431	3300012961	Soil	AILALKSMERLVDNALIAQKFRDLGFAGVRVSGAGATRRVEGVWPGKDTSANMPPQIVAVAKL*
Ga0164302_114011961	3300012961	Soil	LSLLCRRVMERLGDNALNAQKFRDLGFAGVKVSSAGATRRVEGVWPGKDTSANMPPQIVAVAKL*
Ga0164309_111111212	3300012984	Soil	FTSVRVSGSGATRKVEGVWPGKNMSTNMPRQIVAVAKL*
Ga0164309_117986741	3300012984	Soil	LALRSMERLVDNPLIAQKFRDLGFAGVRVSGAGATRRVEGVWPGKDTSANMPPQIVAVAKL*
Ga0164307_117018992	3300012987	Soil	LGFSGVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL*
Ga0164306_100549055	3300012988	Soil	GFSKVRVSGAGAVRRVEGVSPRKDASATLPRQIVAVAGL*
Ga0164305_122412311	3300012989	Soil	RKVRALGFSGVRVSGTGAKRRVEGVWRLKDASTTLPRQIVAVAGL*
Ga0157307_10333982	3300013096	Soil	YRATLHLNSVERLVDNGLIESKFRALGFSGVRVSGTGATRRVEGVWPRKDASAPLPPQIVAVARL*
Ga0157378_123670531	3300013297	Miscanthus Rhizosphere	RYQATLSLNSVELSDNALIAEKFRAMGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVARL*
Ga0163162_128473361	3300013306	Switchgrass Rhizosphere	SVERLTDNALIARRFRALGFSKVRVSGAGAVRRVEGVWRRKDASATLPRQIVAVASL*
Ga0157375_110023862	3300013308	Miscanthus Rhizosphere	RALGFSKVHVSGSGATRRVEGVWPGKDVSTPLPSQIVAVAKL*
Ga0173480_105494571	3300015200	Soil	ELIARKFRALGFSKVHVSGSGATRRVEGVWPRKNASAPLPSQIVAVARV*
Ga0132256_1001634592	3300015372	Arabidopsis Rhizosphere	VRVSGSGATRKVEGVWAGKDMSANMPRQIVAVAGL*
Ga0190270_105771441	3300018469	Soil	GFSKVRVSGAGAVSSVEGVWTRKNASGSLPRQIVAVARL
Ga0190270_108623351	3300018469	Soil	ARKFRALGFSKVRVSGSGATRRVEGVWPGKDASAPLPRQIVAVARM
Ga0190274_115699972	3300018476	Soil	YRATLSLNAIECLTDNVLIARKFRALGFSKVRVSGAGAVRSVEGVWTRKNASGSLPRQIVAVARL
Ga0173481_102201082	3300019356	Soil	VERLADNELIARKFRALGFSKVHVSGSGATRRVEGVWPRKNARTPLPSQVVAVARV
Ga0222622_110776831	3300022756	Groundwater Sediment	ATLSLSSVERMVDNDAIAQRFRALGFTSVRVSGSGATRKVEGVWPGKDMSANMPRQIVAVAKL
Ga0247788_10901911	3300022901	Soil	LVDNALIESKFRALGFSGVRVSGTGATRRVEGVWPRKDASAPLPPQIVAVARL
Ga0247797_10240292	3300023057	Soil	DNELIARKFRALGFAKVRVSGSGATRKVEGVWPGKDASAPLPHQIVAVARM
Ga0207642_111253572	3300025899	Miscanthus Rhizosphere	RALGFSRVRVSGTGAKRRVEGVWHLKDASTTLPRQIVAVAGL
Ga0207688_101982023	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	QKFRALGFVSVRVSGSGAKRRVEGVWPGKETSANLPPQIVAVAKL
Ga0207662_103710573	3300025918	Switchgrass Rhizosphere	AQKFRALGFTSVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL
Ga0207706_116684171	3300025933	Corn Rhizosphere	TSVRVSGSGATRKVEGVWPGKDMSANLPRQIVAVAKL
Ga0207669_115975612	3300025937	Miscanthus Rhizosphere	LGFTSVRVSGSGAKRKVEGVWPGKDMSANLPRQIVAVAKL
Ga0207669_118599012	3300025937	Miscanthus Rhizosphere	KVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVARL
Ga0207704_115853083	3300025938	Miscanthus Rhizosphere	LALNSVERLADNALIARRFRALGFSKVRVSGAGAVRRVEGVWSRNDASATLPRQIVAVAR
Ga0207689_106757961	3300025942	Miscanthus Rhizosphere	IESKFRALGFSGVRVSGTGATRRVEGVWPRKDASAPLPPQIVAVARL
Ga0207667_112358321	3300025949	Corn Rhizosphere	DNGAIAQKFRALGFTSVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL
Ga0207651_118375831	3300025960	Switchgrass Rhizosphere	NTLIARKFRALGFSGVHVSGTGAMRRVEGVWHRKDASATLPRQIVAVARL
Ga0207712_109437161	3300025961	Switchgrass Rhizosphere	LIARKFRALGFSKVRVSGAGAVRRVEGVWHRKDASTTLPRQIVTVAGL
Ga0207640_121255022	3300025981	Corn Rhizosphere	SIAQRFRALGFTSVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL
Ga0207703_123482212	3300026035	Switchgrass Rhizosphere	SVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL
Ga0207708_114119251	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	ALGFSKVRVSGAGAIRRVEGVWPREDASASLPRQIVAVARL
Ga0207702_104667833	3300026078	Corn Rhizosphere	VRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL
Ga0207648_116166741	3300026089	Miscanthus Rhizosphere	RLADNELIARKFRALGFAKVRVSGSGATRKVEGVWPGKDASAPLPHQIVAVARM
Ga0207675_1010773421	3300026118	Switchgrass Rhizosphere	SKVRVSGAGAVRRVEGVWHRKDASTTLPRQIVTVAGL
Ga0207683_116785872	3300026121	Miscanthus Rhizosphere	LADNELIARKFRALGFARVHVSGSGATRKVEVVWPGKDASAPLPRQIVAVARM
Ga0207698_110541273	3300026142	Corn Rhizosphere	AQIAQKFRALGFVSVRVSGSGAKRRVEGVWPGKETSANLPPQIVAVAKL
Ga0209593_103345821	3300027743	Freshwater Sediment	KFRALGFSDVRVTGLGAIRRVEGFWSRKDASTPLPPQIIAVARL
Ga0207428_110895222	3300027907	Populus Rhizosphere	VRVSGAGAVRRVEGIWHRKDASATLPRQIVAVARL
Ga0209382_101122693	3300027909	Populus Rhizosphere	ATLREGLPQNELADTISRAFRALGFTRVHVSGSGSTRKVEGVWPGKDASAPLPRQIVAVARM
Ga0268264_124921741	3300028381	Switchgrass Rhizosphere	SLNSVEQLADNAMIAQKFRDMGFSRVRVSGAGAMRRVEGVWPGNDSSAHMPHQIVAVARL
Ga0307312_111506701	3300028828	Soil	ALSPVEQLADNALIARKFRALGFSSVRVSGTGAKRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0311348_107700823	3300030019	Fen	FRDVGFSRVRVSGSGAIRHVEGVWPGQDASANMPSQIVSVAIL
Ga0307498_100192675	3300031170	Soil	SSVRVSGAGAKRRVEGVWHRKDASTTLPRQIVAVAGL
Ga0307499_100568752	3300031184	Soil	ALGFTSVRVSGSGATRKVEGVWPGKDMSTNMPRQIVAVAKL
Ga0307445_101998662	3300031364	Salt Marsh	PVEQLADNALIARKFRALGFSKVHVSGAGATRRVEGVWPGKDMSATMPPQIVAVATLR
Ga0170820_122304101	3300031446	Forest Soil	LGFSRVRVSGTGAVRRVEGVWFRKDASATLPRQIVAVDGL
Ga0310888_102564223	3300031538	Soil	RALGFSKVRVSGTGAIRLVEGVWPRKDASAPLPPQIVAVAVI
Ga0307379_101602951	3300031565	Soil	PVEQLADNALIARKFSALGFSKVRVSGAGATRRVEGVWPGKDTSATMPHQIVAVATLR
Ga0307379_115904722	3300031565	Soil	PVEQLADNALIARKFSALGFSKVRVSGAGATRRVEGVWPGKDASATMPHQIVAVATLR
Ga0318509_104874191	3300031768	Soil	ADNALIARKFRALGFSSVRVSGAGAMRQVEGVWPRETATAPLPREIVAVSRL
Ga0310900_102511404	3300031908	Soil	AQIAQKFRALGFVSVRVSGSGAKRRVEGVWPGKETSANLPRQIVAVAKL
Ga0310884_100930831	3300031944	Soil	AQKFRALGFVSARVSGSGAKRRVEGVWPGKETSANPPPQIVAVAKL
Ga0310902_103295193	3300032012	Soil	VERLADNALIARKFRALGFSKVRVSGTGAIRLVEGVWPRKDASAPLPPQIVAVAVI
Ga0310889_101639721	3300032179	Soil	SVERMADNAQIAQKFRALGFTSVRVSGSGAKRKVEGVWPGKDMSTNMPRQIVAVAKL
Ga0307471_1021364682	3300032180	Hardwood Forest Soil	DNALIARKFRALGFSGVRVSGAGAIRRVEGVWPRKDASATLPPQIVAVAGL
Ga0307472_1005288373	3300032205	Hardwood Forest Soil	TVHQGERYRAILALRSMERLVDNPLIAQKFRDLGFAGVKVSGAGATRRVEGVWPGKDTSANMPPQIVAVAKP
Ga0315273_121323141	3300032516	Sediment	SVEQLADNALIAQKFRDLGFSRVRVSGAGATRRVEGVWPGNDTSANMPPQIVAVAKL
Ga0335084_107666613	3300033004	Soil	LGFSKVHVSGSGATRRVEGVWPGKDISTPLPSQIVAVAKL
Ga0316622_1026463771	3300033416	Soil	LGFAKVRVSGSGATRRVEGVWPGKDVSAPLPSQIVAVARM
Ga0247830_111928682	3300033551	Soil	VERLADNAQIAQKFRALGFTSVRVSGSGARRKVEGVWPGKDMSANLPRQIVAVAKL
Ga0247830_112545681	3300033551	Soil	LTDNALIARKFRAIGFSKVRVSGSGAVRRVEGVWSRKDASTTLPRQIVAVARL
Ga0373899_018345_615_752	3300034077	Sediment Slurry	RKFRALGFAKVRVSGSGATRKVEGVWPGKDASAPLPRQIVAVARM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F071206

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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