Metagenome / Metatranscriptome Family F074893

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F074893
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	97 residues
Representative Sequence	MISSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGAAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA
Number of Associated Samples	81
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.19 %
% of genes near scaffold ends (potentially truncated)	34.45 %
% of genes from short scaffolds (< 2000 bps)	78.15 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.303 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands (39.496 % of family members)
Environment Ontology (ENVO)	Unclassified (54.622 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (49.580 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.37% β-sheet: 24.60% Coil/Unstructured: 46.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13492	GAF_3	3.36
PF00764	Arginosuc_synth	2.52
PF00903	Glyoxalase	2.52
PF00884	Sulfatase	1.68
PF00856	SET	1.68
PF02518	HATPase_c	1.68
PF02627	CMD	0.84
PF13527	Acetyltransf_9	0.84
PF07075	DUF1343	0.84
PF03006	HlyIII	0.84
PF08274	YjdM_Zn_Ribbon	0.84
PF00849	PseudoU_synth_2	0.84
PF02852	Pyr_redox_dim	0.84
PF03448	MgtE_N	0.84
PF00211	Guanylate_cyc	0.84
PF01022	HTH_5	0.84
PF01263	Aldose_epim	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	2.52
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.84
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.84
COG0676	D-hexose-6-phosphate mutarotase	Carbohydrate transport and metabolism [G]	0.84
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.84
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.84
COG2017	Galactose mutarotase or related enzyme	Carbohydrate transport and metabolism [G]	0.84
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.84
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.84
COG2239	Mg/Co/Ni transporter MgtE (contains CBS domain)	Inorganic ion transport and metabolism [P]	0.84
COG2824	Uncharacterized Zn-ribbon-containing protein	General function prediction only [R]	0.84
COG3876	Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 family	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
All Organisms	root	All Organisms	43.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
cellular organisms	root	All Organisms → cellular organisms	43.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	36.13 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	32.77 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	2.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	4.20 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	4.20 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	3.36 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	3.36 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	2.52 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	1.68 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Balneatrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Balneatrichaceae	3.36 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.52 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	2.52 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	2.52 %
Candidatus Thiopontia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thiopontia	1.68 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1.68 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	1.68 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1.68 %
gamma proteobacterium SS-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium SS-5	0.84 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Balneatrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Balneatrichaceae → Balneatrix	3.36 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	2.52 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.52 %
Candidatus Thiopontia autotrophica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thiopontia → Candidatus Thiopontia autotrophica	1.68 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	1.68 %
Thiocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis	1.68 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	1.68 %
gamma proteobacterium SS-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium SS-5	0.84 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Balneatrix alpica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Balneatrichaceae → Balneatrix → Balneatrix alpica	3.36 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	2.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.52 %
Pseudomonas azotifigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas azotifigens	1.68 %
Rhodanobacter fulvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter fulvus	1.68 %
Thiocystis violascens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violascens	1.68 %
Candidatus Thiopontia autotrophica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thiopontia → Candidatus Thiopontia autotrophica	1.68 %
Marinobacter manganoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter manganoxydans	0.84 %
Marinobacter santoriniensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter santoriniensis	0.84 %
Pseudomonas thermotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas thermotolerans	0.84 %
gamma proteobacterium SS-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium SS-5	0.84 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.30 %
Balneatrix alpica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Balneatrichaceae → Balneatrix → Balneatrix alpica	3.36 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	2.52 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.52 %
Pseudomonas azotifigens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas azotifigens	1.68 %
Rhodanobacter fulvus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter fulvus	1.68 %
Thiocystis violascens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violascens	1.68 %
Candidatus Thiopontia autotrophica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thiopontia → Candidatus Thiopontia autotrophica	1.68 %
Marinobacter manganoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter manganoxydans	0.84 %
Marinobacter santoriniensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter santoriniensis	0.84 %
Pseudomonas thermotolerans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas thermotolerans	0.84 %
gamma proteobacterium SS-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium SS-5	0.84 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002495\|BRMGV_1061872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium SS-5	2050	Open in IMG/M
3300002822\|BMAI_1064620	Not Available	872	Open in IMG/M
3300003847\|Ga0055582_1034017	Not Available	868	Open in IMG/M
3300003988\|Ga0055475_10004239	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3389	Open in IMG/M
3300003988\|Ga0055475_10020004	All Organisms → cellular organisms → Bacteria → Proteobacteria	1822	Open in IMG/M
3300003988\|Ga0055475_10035272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1425	Open in IMG/M
3300003988\|Ga0055475_10063804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1086	Open in IMG/M
3300003988\|Ga0055475_10220951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas azotifigens	600	Open in IMG/M
3300003989\|Ga0055473_10002701	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3837	Open in IMG/M
3300004000\|Ga0055458_10025544	Not Available	1325	Open in IMG/M
3300004003\|Ga0055445_10019826	Not Available	1801	Open in IMG/M
3300004007\|Ga0055476_10001247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6992	Open in IMG/M
3300004007\|Ga0055476_10029384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1678	Open in IMG/M
3300004007\|Ga0055476_10031314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1630	Open in IMG/M
3300004007\|Ga0055476_10245143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas azotifigens	626	Open in IMG/M
3300004008\|Ga0055446_10091564	Not Available	816	Open in IMG/M
3300004008\|Ga0055446_10160665	Not Available	651	Open in IMG/M
3300004010\|Ga0055474_10046139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1265	Open in IMG/M
3300004010\|Ga0055474_10247000	Not Available	629	Open in IMG/M
3300004011\|Ga0055460_10084784	Not Available	878	Open in IMG/M
3300004011\|Ga0055460_10176217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter manganoxydans	654	Open in IMG/M
3300004018\|Ga0055452_10283631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Balneatrichaceae → Balneatrix → Balneatrix alpica	559	Open in IMG/M
3300004023\|Ga0055441_10057579	Not Available	905	Open in IMG/M
3300004030\|Ga0055444_10166358	Not Available	806	Open in IMG/M
3300004030\|Ga0055444_10293088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	625	Open in IMG/M
3300004055\|Ga0055480_10002350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7571	Open in IMG/M
3300004055\|Ga0055480_10301381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas thermotolerans	648	Open in IMG/M
3300004055\|Ga0055480_10394832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Balneatrichaceae → Balneatrix → Balneatrix alpica	559	Open in IMG/M
3300004056\|Ga0055478_10092534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter santoriniensis	842	Open in IMG/M
3300004064\|Ga0055479_10006920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3381	Open in IMG/M
3300004073\|Ga0055516_10022533	Not Available	1101	Open in IMG/M
3300004073\|Ga0055516_10069511	Not Available	759	Open in IMG/M
3300004074\|Ga0055518_10161131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Balneatrichaceae → Balneatrix → Balneatrix alpica	572	Open in IMG/M
3300004075\|Ga0055519_10173361	Not Available	531	Open in IMG/M
3300004077\|Ga0055523_10191025	Not Available	530	Open in IMG/M
3300004113\|Ga0065183_10112367	Not Available	1054	Open in IMG/M
3300004113\|Ga0065183_10350192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violascens	691	Open in IMG/M
3300005588\|Ga0070728_10339787	Not Available	805	Open in IMG/M
3300005589\|Ga0070729_10303995	Not Available	898	Open in IMG/M
3300005589\|Ga0070729_10529351	Not Available	643	Open in IMG/M
3300005590\|Ga0070727_10330592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter fulvus	849	Open in IMG/M
3300005590\|Ga0070727_10462683	Not Available	708	Open in IMG/M
3300005600\|Ga0070726_10100470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1524	Open in IMG/M
3300005601\|Ga0070722_10143790	Not Available	950	Open in IMG/M
3300005609\|Ga0070724_10344704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocystis → Thiocystis violascens	656	Open in IMG/M
3300005609\|Ga0070724_10484906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Balneatrichaceae → Balneatrix → Balneatrix alpica	552	Open in IMG/M
3300005612\|Ga0070723_10060920	Not Available	1527	Open in IMG/M
3300005832\|Ga0074469_10384732	Not Available	524	Open in IMG/M
3300006467\|Ga0099972_10717308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter fulvus	960	Open in IMG/M
3300009506\|Ga0118657_10698640	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300009509\|Ga0123573_10034962	All Organisms → cellular organisms → Bacteria → Proteobacteria	5476	Open in IMG/M
3300009509\|Ga0123573_10489490	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300010392\|Ga0118731_100344534	Not Available	862	Open in IMG/M
3300010392\|Ga0118731_102533918	All Organisms → cellular organisms → Bacteria → Proteobacteria	6008	Open in IMG/M
3300010392\|Ga0118731_107955808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2509	Open in IMG/M
3300010392\|Ga0118731_108378138	Not Available	1364	Open in IMG/M
3300010392\|Ga0118731_109716168	Not Available	750	Open in IMG/M
3300010392\|Ga0118731_111920952	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300010392\|Ga0118731_111931066	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300010392\|Ga0118731_114029654	Not Available	882	Open in IMG/M
3300010392\|Ga0118731_115012622	Not Available	964	Open in IMG/M
3300010412\|Ga0136852_11810724	Not Available	576	Open in IMG/M
3300010413\|Ga0136851_10016996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8286	Open in IMG/M
3300010430\|Ga0118733_100157870	Not Available	4520	Open in IMG/M
3300010430\|Ga0118733_100378294	Not Available	2804	Open in IMG/M
3300010430\|Ga0118733_100433297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2607	Open in IMG/M
3300010430\|Ga0118733_101150436	Not Available	1549	Open in IMG/M
3300010430\|Ga0118733_102262003	Not Available	1078	Open in IMG/M
3300010430\|Ga0118733_104719881	Not Available	724	Open in IMG/M
3300010430\|Ga0118733_106943311	Not Available	589	Open in IMG/M
3300019705\|Ga0193981_1033687	Not Available	612	Open in IMG/M
3300019711\|Ga0193993_1005734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thiopontia → Candidatus Thiopontia autotrophica	1162	Open in IMG/M
3300019712\|Ga0193969_1021411	Not Available	748	Open in IMG/M
3300019714\|Ga0193975_1014915	Not Available	809	Open in IMG/M
3300019717\|Ga0193972_1035033	Not Available	592	Open in IMG/M
3300019732\|Ga0194014_1013167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Thiopontia → Candidatus Thiopontia autotrophica	984	Open in IMG/M
3300019734\|Ga0193970_1000288	All Organisms → cellular organisms → Bacteria	3858	Open in IMG/M
3300019737\|Ga0193973_1050785	Not Available	564	Open in IMG/M
3300019740\|Ga0193988_1063624	Not Available	570	Open in IMG/M
3300019749\|Ga0193983_1094520	Not Available	500	Open in IMG/M
3300021337\|Ga0210341_1708757	Not Available	650	Open in IMG/M
3300021351\|Ga0210365_10008650	Not Available	625	Open in IMG/M
3300022384\|Ga0210321_1078717	Not Available	511	Open in IMG/M
(restricted) 3300022938\|Ga0233409_10012581	Not Available	2059	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10158316	Not Available	740	Open in IMG/M
(restricted) 3300024519\|Ga0255046_10393339	Not Available	657	Open in IMG/M
(restricted) 3300024528\|Ga0255045_10092435	Not Available	1088	Open in IMG/M
3300025550\|Ga0210098_1057029	Not Available	641	Open in IMG/M
3300025565\|Ga0210110_1090017	Not Available	733	Open in IMG/M
3300025593\|Ga0210096_1168595	Not Available	612	Open in IMG/M
3300025599\|Ga0210074_1000020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	74204	Open in IMG/M
3300025599\|Ga0210074_1006714	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3577	Open in IMG/M
3300025599\|Ga0210074_1129519	Not Available	667	Open in IMG/M
3300025798\|Ga0210063_1097679	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300025798\|Ga0210063_1109366	Not Available	596	Open in IMG/M
3300025799\|Ga0210122_1012631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2215	Open in IMG/M
3300025813\|Ga0210064_1002326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7155	Open in IMG/M
3300025814\|Ga0210101_1003809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4486	Open in IMG/M
3300025814\|Ga0210101_1119523	Not Available	688	Open in IMG/M
3300025823\|Ga0210123_1001353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	12546	Open in IMG/M
3300025883\|Ga0209456_10000210	All Organisms → cellular organisms → Bacteria → Proteobacteria	32601	Open in IMG/M
3300025895\|Ga0209567_10070049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1625	Open in IMG/M
3300025969\|Ga0210080_1004268	Not Available	1744	Open in IMG/M
3300026007\|Ga0210124_1140286	Not Available	770	Open in IMG/M
3300027758\|Ga0209379_10254419	Not Available	596	Open in IMG/M
3300027790\|Ga0209273_10019842	Not Available	3328	Open in IMG/M
3300027820\|Ga0209578_10360565	Not Available	667	Open in IMG/M
3300027845\|Ga0209271_10168464	Not Available	896	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10085941	Not Available	1367	Open in IMG/M
3300027917\|Ga0209536_101137417	Not Available	959	Open in IMG/M
3300027978\|Ga0209165_10048303	Not Available	1513	Open in IMG/M
(restricted) 3300028045\|Ga0233414_10281170	Not Available	760	Open in IMG/M
3300028599\|Ga0265309_10022792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3258	Open in IMG/M
3300028600\|Ga0265303_10015621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5004	Open in IMG/M
3300028600\|Ga0265303_11336112	Not Available	597	Open in IMG/M
3300031539\|Ga0307380_10788201	Not Available	787	Open in IMG/M
3300032231\|Ga0316187_10136359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1917	Open in IMG/M
3300032252\|Ga0316196_10220206	Not Available	842	Open in IMG/M
3300032258\|Ga0316191_10008585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	7750	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.16%
Terrestrial	Environmental → Terrestrial	0.84%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	86.55%
Freshwater	Environmental → Aquatic → Freshwater	8.40%
Sediment	Environmental → Aquatic → Sediment	4.20%
Soil	Environmental → Terrestrial → Soil	0.84%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Marine → Wetlands	40.34%
Coastal	Environmental → Aquatic → Marine → Coastal	29.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	8.40%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.20%
Inlet	Environmental → Aquatic → Marine → Inlet	3.36%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.52%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.52%
Subtidal Zone	Environmental → Aquatic → Marine → Subtidal Zone	2.52%
Strait	Environmental → Aquatic → Marine → Strait	1.68%
Clay	Environmental → Terrestrial → Soil → Clay	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	39.50%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	29.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	8.40%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.20%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	3.36%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.52%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment	2.52%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.68%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.68%
Oil-Contaminated Sediment	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment	0.84%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.84%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	39.50%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	18.49%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	8.40%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	8.40%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	4.20%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	3.36%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	3.36%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.52%
Sediment	Environmental → Aquatic → Marine → Subtidal Zone → Sediment → Sediment	2.52%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	1.68%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.68%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.84%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Sediment → Mangrove Soil	0.84%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment → Mangrove Soil	0.84%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.84%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	0.84%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.84%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002495	454 Fosmid Sequence	Environmental	Open in IMG/M
3300002822	Illumina_Fosmid_Bertioga	Environmental	Open in IMG/M
3300003847	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11	Environmental	Open in IMG/M
3300003988	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2	Environmental	Open in IMG/M
3300003989	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordA_D2	Environmental	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300004003	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D1	Environmental	Open in IMG/M
3300004007	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2	Environmental	Open in IMG/M
3300004008	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordB_D2	Environmental	Open in IMG/M
3300004010	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D1	Environmental	Open in IMG/M
3300004011	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2	Environmental	Open in IMG/M
3300004018	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWC_D2	Environmental	Open in IMG/M
3300004023	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordA_D2	Environmental	Open in IMG/M
3300004030	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2	Environmental	Open in IMG/M
3300004055	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2	Environmental	Open in IMG/M
3300004056	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D1	Environmental	Open in IMG/M
3300004064	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D1	Environmental	Open in IMG/M
3300004073	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2	Environmental	Open in IMG/M
3300004074	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqA_D1	Environmental	Open in IMG/M
3300004075	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqB_D1	Environmental	Open in IMG/M
3300004077	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_ThreeSqC_D2	Environmental	Open in IMG/M
3300004113	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (version 2)	Environmental	Open in IMG/M
3300005588	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1	Environmental	Open in IMG/M
3300005589	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2	Environmental	Open in IMG/M
3300005590	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2	Environmental	Open in IMG/M
3300005600	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1	Environmental	Open in IMG/M
3300005601	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1	Environmental	Open in IMG/M
3300005609	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1	Environmental	Open in IMG/M
3300005612	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300006467	Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300019705	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_2-3_MG	Environmental	Open in IMG/M
3300019711	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLC_4-5_MG	Environmental	Open in IMG/M
3300019712	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_5-6_MG	Environmental	Open in IMG/M
3300019714	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRT_2-3_MG	Environmental	Open in IMG/M
3300019717	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_8-9_MG	Environmental	Open in IMG/M
3300019732	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_0-1_MG	Environmental	Open in IMG/M
3300019734	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_6-7_MG	Environmental	Open in IMG/M
3300019737	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRT_9-10_MG	Environmental	Open in IMG/M
3300019740	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FRC_4-5_MG	Environmental	Open in IMG/M
3300019749	Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BLT_4-5_MG	Environmental	Open in IMG/M
3300021337	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.425 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021351	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.637 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022384	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022938 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_oxic_13_MG	Environmental	Open in IMG/M
3300023112 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MG	Environmental	Open in IMG/M
3300024519 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27	Environmental	Open in IMG/M
3300024528 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_23	Environmental	Open in IMG/M
3300025550	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025565	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025593	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025599	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_CordA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025798	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025799	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025813	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_CordC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025814	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025823	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025883	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11 (SPAdes)	Environmental	Open in IMG/M
3300025895	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_12 (SPAdes)	Environmental	Open in IMG/M
3300025969	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026007	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Muzzi_PWC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027758	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1 (SPAdes)	Environmental	Open in IMG/M
3300027790	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1 (SPAdes)	Environmental	Open in IMG/M
3300027820	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)	Environmental	Open in IMG/M
3300027845	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)	Environmental	Open in IMG/M
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027978	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 (SPAdes)	Environmental	Open in IMG/M
3300028045 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MG	Environmental	Open in IMG/M
3300028599	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160524 (Illumina Assembly)	Environmental	Open in IMG/M
3300028600	Marine sediment microbial communities from subtidal zone of North Sea - Hel_20160317 (Illumina Assembly)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300032231	Coastal sediment microbial communities from Maine, United States - Cross River worm burrow 1	Environmental	Open in IMG/M
3300032252	Coastal sediment microbial communities from Maine, United States - Eddy sediment 2 cm	Environmental	Open in IMG/M
3300032258	Coastal sediment microbial communities from Maine, United States - Eddy worm burrow 2 cm	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
BRMGV_10618722	3300002495	Mangrove Soil	MMASNGLQATANNGALTIRITGPMDLLLTSALREFCHETGAVYRRYIIDLQDVSIVRDSGLALLLMLKRLASRTGATLHVINGSSDLMRRCLRLGISPY*
BMAI_10646201	3300002822	Mangrove Soil	MMASNGLQATANNGALTIRITGPMDLLLTSALREFCHETGAVYRRYIIDLQDVSIVRDSGLALLLMLKRLASRTGATLDVIN
Ga0055582_10340171	3300003847	Pelagic Marine	MISSHLQAVADNGSLTIKINGPMDLRLTSALREYCHDTGXAYSRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLQVINGDTDMMHRCLKLGI*
Ga0055475_100042391	3300003988	Natural And Restored Wetlands	MISSRLQAISDNGSLTIRINGPFDLLLTLALRESCHDSGTTYRRYIVDFKHVSIVRDSGLALLLMLKRWASRAGARLYVVNGDR
Ga0055475_100200041	3300003988	Natural And Restored Wetlands	MMVSSGLQAIAKNGALTIRIKGPMDLLLTSALRDFCHGTGAVYRRYIVDLRDVSVVRDSGLALLLMLKRLAGRTGATLHVTNGDTDLMQRCRRLGIKPA*
Ga0055475_100352721	3300003988	Natural And Restored Wetlands	MVSSGLQAIANNGALIIRIKGPMDLLLTSALRDFCHGTGDVYRRYIIDLRDVSVVRDSGLALLLMLKRLASRTGATLHVTNGN
Ga0055475_100638042	3300003988	Natural And Restored Wetlands	VAGDGSLTISINGPMDLLLTRALREHCQDNGATYHRYIVDFRNVSIVRDSGLALLLMLKRWANRAGATLCVINGNRELMRRCFSLGIGPA*
Ga0055475_102209511	3300003988	Natural And Restored Wetlands	MVSSGLQAIANNGSLIIRIKGPMDLLLTSALRDFCHGTGAVYRRYIVDLRDVSIVRDSGLALLLMLKRLASRTGATLHVTNGN
Ga0055473_100027013	3300003989	Natural And Restored Wetlands	MISSRLQAISDNGSLTIRINGPFDLLLTLALRESCHDSGTTYRRYIVDFKHVSIVRDSGLALLLMLKRWASRAGARLYVVNGDRELMNRCLTLGIRPA*
Ga0055458_100255442	3300004000	Natural And Restored Wetlands	MISSHLQAIPDNGSLTIRINGTLDLLLTSALRESCHDTGTIYRRYIVDFQDVSIVRDSGLALLLMLKRWASRAGAKLYVVNGDRDLMHRCLSLGIQPA*
Ga0055445_100198262	3300004003	Natural And Restored Wetlands	MISSRLQAISDNGSLTIRINGPFDLLLTLALRESCHDSGTTYRRYIVDFKNVSIVRDSGLALLLMLKRWASRAGARLYVVNGDRDLMNRCLTLGIRPA*
Ga0055476_100012477	3300004007	Natural And Restored Wetlands	MISNHLYAIADNESLTIKINGPMDLRLTSALREYCHETGVTYSCYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLRVINGNTDLMHRCLKLGI*
Ga0055476_100293842	3300004007	Natural And Restored Wetlands	MMEPGQLHAVASDGSLTISINGPMDLLLTLPLREYCHNSGAAYRSYIVDFQHVGIVRDSGLALLLMLKRWANRAGASLSVINGNRDLMRRCFSLGIGPAA*
Ga0055476_100313142	3300004007	Natural And Restored Wetlands	MVSSGLQAIAKNGALTIRIKGPMDLLLTSALRDFCHGTGAVYRRYIVDLRDVSVVRDSGLALLLMLKRLAGRTGATLHVTNGDTDLMQRCRRLGIKPA*
Ga0055476_102451431	3300004007	Natural And Restored Wetlands	MVSSGLQAIAKNGSLIIRIKGPMDLLLTSALRDFCHGTGAVYRRYIVDLRDVSIVRDSGLALLLMLKRLASRTGATLHVTNGN
Ga0055446_100915641	3300004008	Natural And Restored Wetlands	MMLSSQLNAVAGDGSLTLRIKGPMDLLLTRALREHCQDNGAAYHRYIVDFRDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFALGIGPA*
Ga0055446_101606651	3300004008	Natural And Restored Wetlands	MASSQLHAVAGNGSLTIRISGPMDLLLTMPLREHCQNTGVDYLRYIVDFQDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFLLGIGPA*
Ga0055474_100461392	3300004010	Natural And Restored Wetlands	MVSSQLNAVAGDGSLTISINGPMDLLLTRALREHCQDNGATYHRYIVDFRDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFSLGIGPA*
Ga0055474_102470001	3300004010	Natural And Restored Wetlands	MTSSGLHAIANNGALTIKVTGPMDLLLTSALREFCHETGAVYRRYIIDLRDVSIVRDSGLALLLMLKRLAGRTGATLHVINGNTDLMRRCLKLGISSC*
Ga0055460_100847841	3300004011	Natural And Restored Wetlands	MIANGLQAIANNGALTIRITGPMDLLLTSALREFCHDTGAVYRRYIIDLRDVSIVRDSGLALLLMLKRLASRTGATLHVINGSADLMRRCLKLGISPY*
Ga0055460_101762171	3300004011	Natural And Restored Wetlands	INGTLDLLLTSALRESCHDTGTIYRRYIVDFQDVSIVRDSGLALLLMLKRWASRAGAKLYVVNGDRDLMHRCLSLGIQPA*
Ga0055452_102836311	3300004018	Natural And Restored Wetlands	MISSRLEASADNGALTIRINGPMDLLLTSALREFCHDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRGLSHTGATLHVTNGTRD
Ga0055441_100575791	3300004023	Natural And Restored Wetlands	MASSQLHAVAGNGSLTIRISGPMDLLLTMPLREHCQNTGVDYLRYIVDFQDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFLLGI
Ga0055444_101663581	3300004030	Natural And Restored Wetlands	MMVSSQLNAVAGDGSLTISINGPMDLLLTRALREHCQDNGATYHRYIVDFRDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRR
Ga0055444_102930882	3300004030	Natural And Restored Wetlands	EPGQLHAVASDGSLTISINGPMDLLLTLPLREYCHNSGAAYRSYIVDFQHVGIVRDSGLALLLMLKRWANRAGASLSVINGNRDLMRRCFSLGIGPAA*
Ga0055480_100023505	3300004055	Natural And Restored Wetlands	MISSRLEASADNGALTIRINGPMDLLLTSALREFCHDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRGLSHTGATLHVTNGTRDLMLRCLKLGIKPA*
Ga0055480_103013811	3300004055	Natural And Restored Wetlands	MVSSQLNAVAGDGSLTISINGPMDLLLTRALREHCQDNGATYHRYIVDFRNVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFSLGIGP
Ga0055480_103948321	3300004055	Natural And Restored Wetlands	MVSGSLQAIENNGALTIRITGPMDLLLTSALRDFCHGTGVVYRRYIVDLRDVSIVRDSGLALLLMLKRLASRTGATLHVINGSNDLMRRCLKLGISPY*
Ga0055478_100925341	3300004056	Natural And Restored Wetlands	MMVSSQLNAVAGDGSLTISINGPMDLLLTRALREHCQDNGATYHRYIVDFRDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFSLGIGPA*
Ga0055479_100069201	3300004064	Natural And Restored Wetlands	MISSRLEASADNGALTIRINGPMDLLLTSALREFCHDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRGLSHTGATLHV
Ga0055516_100225331	3300004073	Natural And Restored Wetlands	MGPGQLHAVAGDGALTIRINGPMDLLLTMPLREYCHNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWTNRAGATLS
Ga0055516_100695112	3300004073	Natural And Restored Wetlands	MMASNGLQAIANNGALTIRITGPMDLLLTSALREFCHGTGAVYRRYIIDLQDVSIVRDSGLALLLMLKRLASRTGATLHVINGSTDLMRRCLRLGIS
Ga0055518_101611311	3300004074	Natural And Restored Wetlands	MMATSGLQAFADNGALTIRITGPMDLLLTSALREFCHGTGNVYRRYIVDLRDVSIVRDSGLALLLMLKRLVSRTGATLHVINGNTDLMRRCLRLGISPA*
Ga0055519_101733611	3300004075	Natural And Restored Wetlands	MGPGQLHAVAGDGALTIRINGPMDLLLTMPLREYCHNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWTNRAGATLSVINGNRDLMRRCFSLGIGPA*
Ga0055523_101910251	3300004077	Natural And Restored Wetlands	MKGSSQLHAIAGNESLTIRINGPMDLLLTMPLREHCQDTGASYRRYIVDFQDVGIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRR
Ga0065183_101123671	3300004113	Pelagic Marine	MGILQRSWGINAGVTEMISSRVHAISDNGSLTIRINGPMDLLLTLALRESCHDTSATYHRYIVDFQDVGIVRDSGLALLLMLKRWANRAGAKLYVINGSSDLMRRCLSLGIRTA*
Ga0065183_103501921	3300004113	Pelagic Marine	IKINGPMDLRLTSALREYCHDTGVAYSRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLQVINGDTDMMHRCLKLGI*
Ga0070728_103397872	3300005588	Marine Sediment	MKSSHLQAIADNGSLTIKINGPMDLRLTSALREYCHDTGVAYSRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLHVINGNTDMMHRCLKLGI*
Ga0070729_103039952	3300005589	Marine Sediment	MVSSQVHTIADNGSLTIRIKGPMDLLLTSALREFCHDTAAAYSRYIIDFQDVSIVRDSGLALLLMLKRLTSRTGATLHVINGNTDLMRRCLKLGIQSA*
Ga0070729_105293512	3300005589	Marine Sediment	MISSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGAAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA*
Ga0070727_103305921	3300005590	Marine Sediment	MVSSHIHAIADNESLTIKINGPMDLRLTSALREYCHDTGVAYSRYIVDFQDVSIVRDSGLGLLLMLKRLANRAGATLYVINGNTDLMHRCLKLGI*
Ga0070727_104626831	3300005590	Marine Sediment	MISSHLYAIADNGSLTIKIHGTMDLRLTSALREYCQESGVAYSRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLHVINGNTDMMHRCLKLGI*
Ga0070726_101004702	3300005600	Marine Sediment	IRIKGPMDLLLTSALREFCHDTAAAYSRYIIDFQDVSIVRDSGLALLLMLKRLTSRTGATLHVINGNTDLMRRCLKLGIQSA*
Ga0070722_101437902	3300005601	Marine Sediment	MVSSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA*
Ga0070724_103447041	3300005609	Marine Sediment	WGNNVGVNVMISSHLYAIADNGSLTIKIHGTMDLRLTSALREYCQESGVAYNRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLHVINGNTDMMHRCLKLGI*
Ga0070724_104849061	3300005609	Marine Sediment	MISNRLHTISDNGSLTIRINGPMDLLLTLALRESCHDTGKAYRRYIVDFQDVSIVRDSGLALLLMLKRWASRAGAKLYVINGSSDLMRRCL
Ga0070723_100609201	3300005612	Marine Sediment	MISSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA*
Ga0074469_103847322	3300005832	Sediment (Intertidal)	MTISGRVHTVADNGSLTIRISGPLDLLLTLALREYCHDTGTAYHRYIVDFQQVSVVRDSGFALLLMLKRWANQAGATLYAINGNSELMH
Ga0099972_107173081	3300006467	Marine	MISSHIHAIADNESLTIKINGPMDLRLTSALREYCHDTGVAYSRYIVDFQDVSIVRDSGLGLLLMLKRLANRAGATLYVINGNTDLMHRCRKLGI*
Ga0118657_106986401	3300009506	Mangrove Sediment	MEPGQLHAVAGDGSLTIRINGPMDLLLTMPLREYCHNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWANRAGATLSVINGNRDLMRRCFSLGIGPT*
Ga0123573_100349624	3300009509	Mangrove Sediment	MEPSQLQAVADDGSLTLRINGPMDLLLTMQLREYCHNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWANRAGATLSVINGSRDLMRRCFSLGIGPA*
Ga0123573_104894902	3300009509	Mangrove Sediment	MEPGQLHAVAGNGSLTIRINGPMDLLLTMPLREYCQNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWANRAGATLSVINGNRDLMRRCFSLGIGQD*
Ga0118731_1003445342	3300010392	Marine	VVTDTPQRTWGINGGETVMISNRLHTISDNGSLTIRIHGPMDLLLTLALRESCHDTDKAYRRYIVDFQDVSIVRDSGLALLLMLKRWASRA
Ga0118731_1025339184	3300010392	Marine	MISNRLHAISDNGSLTIRINGPMDLLLTSALRESCHDTGKAYRRYIVDFQDVSIVRDSGLALLLMLKRWASRAGAKLYVINGSSDLMRRCLSLGIRPA*
Ga0118731_1079558084	3300010392	Marine	MEILQRNWRINAGVTVVISSRLHAISDNGSLTIRINGPMDLLLTSALRESCHDTGATYHRYIVDFQDVGIVRDSGLALLLMLKRWANRAGAKLYVINGNSDLMRRCLSLGIRPA*
Ga0118731_1083781382	3300010392	Marine	VATDTLRRTWGNNVGVNVMISSHLYAIADNGSLTIKIHGTMDLRLTSALREYCQESGVAYNRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLHVINGNTDMMHRCLKLGIQSA*
Ga0118731_1097161682	3300010392	Marine	MISSSLHTIPDNGSLTIKINGPMDLMLTSALRESCYDTGAAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCLSLGIRPA*
Ga0118731_1119209521	3300010392	Marine	LWRIWGINGGVTVMISSCLHTIPDNESLTIKINGPMDLLLTSALRESCYDTGEAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRSA*
Ga0118731_1119310661	3300010392	Marine	MVSSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGTAYQRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA*
Ga0118731_1140296542	3300010392	Marine	VLKEALQRTWRHNGGVTMMKSSCLHAISDNGSLMIRINGTMDLMLTSALRESCYDTGTTYHRYIVDFQDVSIVRDSGLALLLMLKRWANRAGAKLYVINGSSDLMRRCLSLGIRPA*
Ga0118731_1150126222	3300010392	Marine	RVHAISDNGSLTIRINGPMDLLLTSALRESCYDAGATYHRYIVDFQDVGIVRDSGLALLLMLKRWANRAGAKLYVVNGSSELMRRCLSLGIRPA*
Ga0136852_118107241	3300010412	Mangrove Sediment	MEPGQLHAVAGDGSLTIRINGPMDLLLTMPLREYCQNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWANRAGATLSVINGNRDLMRRCFSLGIGPT*
Ga0136851_100169963	3300010413	Mangrove Sediment	MMVSNGLQAIANNGALTIRITGPMDLLLTSPLREFCHETGAVYRRYIVDLRDVSIVRDSGLALLLMLKRLVSRTGATLHVINGSTDLMRRCLKLGISPY*
Ga0118733_1001578706	3300010430	Marine Sediment	VAKNTLRRTWGNNGGVNVMKSSHLQAIADNGSLTIKINGPMDLRLTSALREYCHDTGVAYSRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLHVINGNTDMMHRCLKLGI*
Ga0118733_1003782943	3300010430	Marine Sediment	MWGNNVGVNVMISSHLYAIADNGSLTIKIHGTMDLRLTSALREYCQESGVAYSRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLHVINGNTDMMHRCLKLGIQSA*
Ga0118733_1004332974	3300010430	Marine Sediment	VRADTLWRIWGINGGVTVMVSSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA*
Ga0118733_1011504362	3300010430	Marine Sediment	MEILQRSWRINAGVTVMISSRVHAISDNGSLTIRINGPMDLLLTSALRESCYDAGATYHRYIVDFQDVGIVRDSGLALLLMLKRWANRAGAKLYVVNGSSELMRRCLSLGIRPA*
Ga0118733_1022620033	3300010430	Marine Sediment	MVSSQVHTNADNGSLTIRIKGPMDLLLTSALREFCHDTATAYSRYIIDFQDVSIVRDSGLALLLMLKRLTNRTGATLHVINGNTDLMRRCLKLGIQSA*
Ga0118733_1047198811	3300010430	Marine Sediment	GVTVMISSCLHTIPDNESLTIKINGPMDLLLTSALRESCYDTGEAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA*
Ga0118733_1069433111	3300010430	Marine Sediment	TIKINGPMDLRLTSALREYCHDTGVAYSRYIVDFQDVSIVRDSGLGLLLMLKRLANRAGATLYVINGNTDLMHRCRKLGI*
Ga0193981_10336871	3300019705	Sediment	MVPSRLYAIADNGSLTIRISGPMDLLLTSALRECCHDTATDYSRYIVDFQDVSIVRDSGLALLLMLKRLANRTGATLHVINGNTDLMHRCYKLGIKSASL
Ga0193993_10057341	3300019711	Sediment	MIPSRLHAIADNGALTIRISGPMDLLLTWALRECCHDAAAAYSRHIVDFKDVSIVRDSGLALLLMLKRLANRTGATLHVINGSSDVMQRCLKLGI
Ga0193969_10214111	3300019712	Sediment	PSRLYAIADNGSLTIRISGPMDLLLTSALRECCHDTATDYSRYIVDFQDVSIVRDSGLALLLMLKRLANRTGATLHVINGNTDLMHRCYKLGIQSASL
Ga0193975_10149151	3300019714	Sediment	MEPAQLHAIAGEGSLTIRINGPMDLLLTMPLREYCHNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWTNRAGATLSVINGNRDLMR
Ga0193972_10350331	3300019717	Sediment	TRANTGGEIVMVPSRLYAIADNGSLTIRISGPMDLLLTWALRECCHDAAAAYSRYIVDFKDVSIVRDSGLALLLMLKRLANRTGATLHVINGSSDLMHRCHKLGIHPA
Ga0194014_10131672	3300019732	Sediment	MIPSRLHAIADNGALTIRISGPMDLLLTWALRECCHDAAAAYSRYIVDFKDVSIVRDSGLALLLMLKRLANRTGATLHVINGSSDLMHRCHKL
Ga0193970_10002881	3300019734	Sediment	MIPSRLHAIADNGALTIRISGPMDLLLTWALRECCHDAAAAYSRYIVDFKDVSIVRDSGLALLLMLKRLANRTGATLHVINGSSDLMHRCHKLGI
Ga0193973_10507852	3300019737	Sediment	MIPSRLHAIADNGALTIRISGPMDLLLTWALRECCHDAAAAYSRYIVDFKDVSIVRDSGLALLLMLKRWTNRAGATLSVINGNRDLM
Ga0193988_10636241	3300019740	Sediment	MVPSRLYAIADNGSLTIRISGPMDLLLTSALRECCHDTATDYSRYIVDFQDVSIVRDSGLALLLMLKRLANRTGATLHVINGNTDLMHRCYKLGIKSAS
Ga0193983_10945201	3300019749	Sediment	TIRISGPMDLLLTWALRECCHDAAAAYSRYIVDFKDVSIVRDSGLALLLMLKRLANRTGATLHVINGSSDLMHRCHKLGIHPA
Ga0210341_17087571	3300021337	Estuarine	MKGSSQLYAVAGNESLTIRIDGPMDLLLTMPLREHCQDTGAAYRRYIVDFQDVGIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFLLGIGPA
Ga0210365_100086502	3300021351	Estuarine	MQSSQLRAVAGNGSLTISINGPMDLLLTMPLQEHCQNTGADYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFLLGIGPA
Ga0210321_10787171	3300022384	Estuarine	MVPSQLHAVAGNESLTIRINGPMDLLLTMPLREHCQDTGAAYRRYIVDFQDVGIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFLLGIGPA
(restricted) Ga0233409_100125813	3300022938	Seawater	MVSSQVHTIADNGSLTIRIKGPMDLLLTSALREFCHDTAAAYSRYIIDFQDVSIVRDSGLALLLMLKRLTSRTGATLHVINGNTDLMRRCLKLGIQSA
(restricted) Ga0233411_101583161	3300023112	Seawater	MISSCLHTIPDNESLTIKINGPMDLLLTSALRESCYDTGAAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA
(restricted) Ga0255046_103933391	3300024519	Seawater	MVSSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGAAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA
(restricted) Ga0255045_100924352	3300024528	Seawater	MISSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGAAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA
Ga0210098_10570291	3300025550	Natural And Restored Wetlands	NRQIPGHIWGINGGVTVMISSHLQAIPDNGSLTIRINGTLDLLLTSALRESCHDTGTIYRRYIVDFQDVSIVRDSGLALLLMLKRWASRAGAKLYVVNGDRDLMHRCLSLGIQPA
Ga0210110_10900172	3300025565	Natural And Restored Wetlands	MISSRLQAISDNGSLTIRINGPFDLLLTLALRESCHDSGTTYRRYIVDFKNVSIVRDSGLALLLMLKRWASRAGARLYVVNGDRDLMNRCLTLGIRPA
Ga0210096_11685951	3300025593	Natural And Restored Wetlands	GGVSVMISSRLQAISDNGSLTIRINGPFDLLLTLALRESCHDSGTTYRRYIVDFKNVSIVRDSGLALLLMLKRWASRAGARLYVVNGDRDLMNRCLTLGIRPA
Ga0210074_100002011	3300025599	Natural And Restored Wetlands	MISSRLQAISDNGSLTIRINGPFDLLLTLALRESCHDSGTTYRRYIVDFKHVSIVRDSGLALLLMLKRWASRAGARLYVVNGDRELMNRCLTLGIRPA
Ga0210074_10067142	3300025599	Natural And Restored Wetlands	MMEPGQLHAVASDGSLTISINGPMDLLLTLPLREYCHNSGAAYRSYIVDFQHVGIVRDSGLALLLMLKRWANRAGASLSVINGNRDLMRRCFSLGIGPAA
Ga0210074_11295191	3300025599	Natural And Restored Wetlands	MLSSQLNAVAGDGSLTLRIKGPMDLLLTRALREHCQDNGAAYHRYIVDFRDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFALGIGPA
Ga0210063_10976791	3300025798	Natural And Restored Wetlands	GTTEELKMMVSSQLNAVAGDGSLTISINGPMDLLLTRALREHCQDNGATYHRYIVDFRDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFSLGIGPA
Ga0210063_11093661	3300025798	Natural And Restored Wetlands	MMVSSGLQAIAKNGALTIRIKGPMDLLLTSALRDFCHGTGAVYRRYIVDLRDVSVVRDSGLALLLMLKRLAGRTGATLHVTNGDTDLMQRCRRLGIKPA
Ga0210122_10126314	3300025799	Natural And Restored Wetlands	MVSSGLQAIANNGALIIRIKGPMDLLLTSALRDFCHGTGDVYRRYIIDLRDVSVVRDSGLALLLMLKRLASRTGATLHVTNGNTDLMQRCLRLGIKPA
Ga0210064_10023267	3300025813	Natural And Restored Wetlands	MISNHLYAIADNESLTIKINGPMDLRLTSALREYCHETGVTYSCYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLRVINGNTDLMHRCLKLGI
Ga0210101_10038091	3300025814	Natural And Restored Wetlands	MISSRLEASADNGALTIRINGPMDLLLTSALREFCHDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRGLSHTGATLHVT
Ga0210101_11195231	3300025814	Natural And Restored Wetlands	MVSSQLNAVAGDGSLTISINGPMDLLLTRALREHCQDNGATYHRYIVDFRDVSIVRDSGLALLLMLKRWANRAGATLCVINGNRDLMRRCFSLGIGPA
Ga0210123_10013539	3300025823	Natural And Restored Wetlands	MISSRLEASADNGALTIRINGPMDLLLTSALREFCHDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRGLSHTGATLHVTNGTRDLMLRCLKLGIKPA
Ga0209456_1000021020	3300025883	Pelagic Marine	MISSHLQAVADNGSLTIKINGPMDLRLTSALREYCHDTGVAYSRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLQVINGDTDMMHRCLKLGI
Ga0209567_100700492	3300025895	Pelagic Marine	MGILQRSWGINAGVTEMISSRVHAISDNGSLTIRINGPMDLLLTLALRESCHDTSATYHRYIVDFQDVGIVRDSGLALLLMLKRWANRAGAKLYVINGSSDLMRRCLSLGIRTA
Ga0210080_10042681	3300025969	Natural And Restored Wetlands	MGPGQLHAVAGDGALTIRINGPMDLLLTMPLREYCHNSGAAYRSYIVDFQNVSIVRDSGLALLLMLKRWTNRAGATLSVINGNRDLMRRCFSLGIGPA
Ga0210124_11402861	3300026007	Natural And Restored Wetlands	MVSSGLQAIAKNGALTIRIKGPMDLLLTSALRDFCHGTGAVYRRYIVDLRDVSVVRDSGLALLLMLKRLAGRTGATLHVTNGDTDLMQRCRRLGIKPA
Ga0209379_102544191	3300027758	Marine Sediment	MVSSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCFSLGIRPA
Ga0209273_100198423	3300027790	Marine Sediment	MKSSHLQAIADNGSLTIKINGPMDLRLTSALREYCHDTGVAYSRYIVDFRNVSIVRDSGLALLLMLKRLANRAGATLHVINGNTDMMHRCLKLGI
Ga0209578_103605651	3300027820	Marine Sediment	MVSSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCLSLGIRPA
Ga0209271_101684642	3300027845	Marine Sediment	MISSCLHTIPDNGSLTIKINGPMDLLLTSALRESCYDTGTAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVVNGSSDLMRRCLSLGIRPA
(restricted) Ga0233415_100859413	3300027861	Seawater	MISSSLHTIPDNGSLTIKINGPMDLMLTSALRESCYDTGAAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSNLMRRCFSLGIRPA
Ga0209536_1011374172	3300027917	Marine Sediment	MEPSQLHAVAGNGSLTIRIDGPMDLLLTMPLREYCHNSGAIYRSYIVDFQNVSIVRDSGLALLLMLKRLASRTGATLHVINGSSDLMRRCLRLGISPY
Ga0209165_100483033	3300027978	Marine Sediment	MISSHIHAIADNESLTIKINGPMDLRLTSALREYCHDTGVAYSRYIVDFQDVSIVRDSGLGLLLMLKRLANRAGATLYVINGNTDLMHRCLKLGI
(restricted) Ga0233414_102811701	3300028045	Seawater	MISSCLHTIPDNESLTIKINGPMDLLLTSALRESCYDTGAAYRRYIVDFQDVSIVRDSGLALLLMLKRWANRAGARLYVINGSSDLMRRCLSLGIRPA
Ga0265309_100227922	3300028599	Sediment	MAPGHLRTIEDNGSLTIRITGPMDLLLTSALRELCHDSAEAYSRYIVDVQDVSIVRDSGLALLLMLKRLANRTGATLYVINGSADLMHRCLKLGIQSASLNPGGANQSGSAGGAVEHPRLCR
Ga0265303_100156215	3300028600	Sediment	MVSGHLHTIADNGSLTIRITGPMDLLLTSALREFCHDTAEAYSRYIVDVQDVSIVRDSGLALLLMLKRLANRTGATLHVVNGKPDLMHRCLKLGIQSA
Ga0265303_113361121	3300028600	Sediment	VATDTLRRTWGNNVGVNVMISSHLYAIPDHGSLTIKINGPMDLRLTSALRECCHDTGVAYSRYIVDFRNVSIVRDSGLALLIMLKRLANRAGSTLQVINGNTDLMHRCLKLGI
Ga0307380_107882011	3300031539	Soil	MTISGRVHTVADNGSLTIRISGPLDLLLTLALREYCHDTGAAYHRYIVDFQQVSVVRDSGFALLLMLKRWANQAGATLYAINGNSELMHRCFSLGIRIARRDTGRVSAC
Ga0316187_101363594	3300032231	Worm Burrow	MMASNCLQATANNGALTIKITGPMDLLLTSALREFCHETGAVYRRYIIDLQDVSIVRDSGLALLLMLKRLASRTGATLHVING
Ga0316196_102202062	3300032252	Sediment	MVSSQVHTIADNGSLTIRIKGPMDLLLTSALREFCHDTAAAYSRYIIDFQDVSIVRDSGLALLLMLKRLTNRTGATLHVINGNTDLMRRCLKLGIQSA
Ga0316191_100085855	3300032258	Worm Burrow	MMASNCLQATANNGALTIKITGPMDLLLTSALREFCHETGAVYRRYIIDLQDVSIVRDSGLALLLMLKRLASRTGATLHVINGSTDLMRRCLRLGISPY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters