Metagenome Family F080409

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F080409
Family Type	Metagenome
Number of Sequences	115
Average Sequence Length	107 residues
Representative Sequence	VESRSLVRPLFAILCLAATALGLNNTYGDDTEVKALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVVSGGLPQVH
Number of Associated Samples	78
Number of Associated Scaffolds	115

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.74 %
% of genes near scaffold ends (potentially truncated)	38.26 %
% of genes from short scaffolds (< 2000 bps)	78.26 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (86.957 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (26.087 % of family members)
Environment Ontology (ENVO)	Unclassified (22.609 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.609 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 24.26% β-sheet: 27.94% Coil/Unstructured: 47.79%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 115 Family Scaffolds
PF13371	TPR_9	50.43
PF13489	Methyltransf_23	13.04
PF00571	CBS	3.48
PF05221	AdoHcyase	2.61
PF12840	HTH_20	2.61
PF08242	Methyltransf_12	1.74
PF00535	Glycos_transf_2	0.87
PF02036	SCP2	0.87
PF00285	Citrate_synt	0.87
PF07715	Plug	0.87
PF05099	TerB	0.87
PF05090	VKG_Carbox	0.87
PF04367	DUF502	0.87

COG ID	Name	Functional Category	% Frequency in 115 Family Scaffolds
COG0499	S-adenosylhomocysteine hydrolase	Coenzyme transport and metabolism [H]	2.61
COG0372	Citrate synthase	Energy production and conversion [C]	0.87
COG2928	Uncharacterized membrane protein	Function unknown [S]	0.87
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	0.87

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.96 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.09 %
Unclassified	root	N/A	13.04 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	49.57 %
Unclassified	root	N/A	13.04 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	49.57 %
Unclassified	root	N/A	13.04 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	49.57 %
Unclassified	root	N/A	13.04 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	24.35 %
Unclassified	root	N/A	13.04 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	4.35 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	2.61 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	24.35 %
Unclassified	root	N/A	13.04 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	4.35 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	2.61 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	24.35 %
Unclassified	root	N/A	13.04 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	4.35 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2.61 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Name	Rank	Taxonomy	Distribution
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	24.35 %
Unclassified	root	N/A	13.04 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	4.35 %
Anaeromyxobacter dehalogenans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	2.61 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.87 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003320\|rootH2_10048943	All Organisms → cellular organisms → Bacteria → Proteobacteria	3454	Open in IMG/M
3300004153\|Ga0063455_100857993	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300005333\|Ga0070677_10306893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	808	Open in IMG/M
3300005333\|Ga0070677_10701688	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300005337\|Ga0070682_100602599	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300005364\|Ga0070673_100815607	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300005543\|Ga0070672_100649652	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300005547\|Ga0070693_100864420	All Organisms → cellular organisms → Bacteria → Proteobacteria	675	Open in IMG/M
3300005616\|Ga0068852_100601194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1104	Open in IMG/M
3300005718\|Ga0068866_11301280	All Organisms → cellular organisms → Bacteria → Proteobacteria	528	Open in IMG/M
3300005841\|Ga0068863_100265500	All Organisms → cellular organisms → Bacteria → Proteobacteria	1660	Open in IMG/M
3300005993\|Ga0080027_10011473	All Organisms → cellular organisms → Bacteria → Proteobacteria	3164	Open in IMG/M
3300005994\|Ga0066789_10058599	All Organisms → cellular organisms → Bacteria → Proteobacteria	1678	Open in IMG/M
3300005995\|Ga0066790_10347756	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	633	Open in IMG/M
3300006173\|Ga0070716_100532953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	872	Open in IMG/M
3300012469\|Ga0150984_102456047	Not Available	509	Open in IMG/M
3300012469\|Ga0150984_103785691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	5034	Open in IMG/M
3300012469\|Ga0150984_108030423	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1735	Open in IMG/M
3300012469\|Ga0150984_109763273	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3711	Open in IMG/M
3300012469\|Ga0150984_111343057	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1829	Open in IMG/M
3300012469\|Ga0150984_112975995	All Organisms → cellular organisms → Bacteria → Proteobacteria	1209	Open in IMG/M
3300012469\|Ga0150984_120835112	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300012469\|Ga0150984_121404407	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1721	Open in IMG/M
3300012469\|Ga0150984_122719695	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300012891\|Ga0157305_10003256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2102	Open in IMG/M
3300012895\|Ga0157309_10020103	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1451	Open in IMG/M
3300012895\|Ga0157309_10054141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1004	Open in IMG/M
3300012895\|Ga0157309_10277984	Not Available	557	Open in IMG/M
3300012900\|Ga0157292_10001550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3995	Open in IMG/M
3300012900\|Ga0157292_10108734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	836	Open in IMG/M
3300012902\|Ga0157291_10004852	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2049	Open in IMG/M
3300012903\|Ga0157289_10014301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1617	Open in IMG/M
3300012912\|Ga0157306_10273821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	607	Open in IMG/M
3300012913\|Ga0157298_10141083	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	709	Open in IMG/M
3300012929\|Ga0137404_10968573	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	778	Open in IMG/M
3300012943\|Ga0164241_10026944	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4401	Open in IMG/M
3300012943\|Ga0164241_10417830	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300012984\|Ga0164309_10005797	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	5858	Open in IMG/M
3300012984\|Ga0164309_10013330	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	4123	Open in IMG/M
3300012985\|Ga0164308_11921813	Not Available	552	Open in IMG/M
3300012987\|Ga0164307_11184513	Not Available	632	Open in IMG/M
3300012988\|Ga0164306_10114374	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1785	Open in IMG/M
3300012988\|Ga0164306_10234428	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1307	Open in IMG/M
3300012988\|Ga0164306_10731096	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	790	Open in IMG/M
3300013772\|Ga0120158_10170379	All Organisms → cellular organisms → Bacteria → Proteobacteria	1176	Open in IMG/M
3300014969\|Ga0157376_12120265	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	600	Open in IMG/M
3300014969\|Ga0157376_12188234	Not Available	592	Open in IMG/M
3300014969\|Ga0157376_12510822	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300015051\|Ga0137414_1255428	All Organisms → cellular organisms → Bacteria → Proteobacteria	1705	Open in IMG/M
3300015264\|Ga0137403_10431197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1195	Open in IMG/M
3300018920\|Ga0190273_11865770	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300021475\|Ga0210392_10001652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11638	Open in IMG/M
3300022870\|Ga0247782_1002935	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2367	Open in IMG/M
3300022894\|Ga0247778_1000238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	93860	Open in IMG/M
3300022906\|Ga0247766_1000647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6548	Open in IMG/M
3300022908\|Ga0247779_1080098	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	853	Open in IMG/M
3300022908\|Ga0247779_1154330	Not Available	601	Open in IMG/M
3300022910\|Ga0247768_1106296	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300022911\|Ga0247783_1000652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	10981	Open in IMG/M
3300022911\|Ga0247783_1040594	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1218	Open in IMG/M
3300022911\|Ga0247783_1045214	Not Available	1154	Open in IMG/M
3300022911\|Ga0247783_1256094	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300022917\|Ga0247777_1069441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1218	Open in IMG/M
3300023092\|Ga0247740_1000987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	12589	Open in IMG/M
3300023097\|Ga0247757_10003431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7053	Open in IMG/M
3300023103\|Ga0247739_10065398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1380	Open in IMG/M
3300023265\|Ga0247780_1005595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2972	Open in IMG/M
3300023268\|Ga0247765_1095380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	627	Open in IMG/M
3300023269\|Ga0247773_1026517	All Organisms → cellular organisms → Bacteria → Proteobacteria	1960	Open in IMG/M
3300023269\|Ga0247773_1052873	All Organisms → cellular organisms → Bacteria → Proteobacteria	1345	Open in IMG/M
3300023269\|Ga0247773_1062121	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300023272\|Ga0247760_1002567	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	13423	Open in IMG/M
3300023272\|Ga0247760_1174445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	552	Open in IMG/M
3300023274\|Ga0247763_1135558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	689	Open in IMG/M
3300023275\|Ga0247776_10069701	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1370	Open in IMG/M
3300025679\|Ga0207933_1008588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	5100	Open in IMG/M
3300025893\|Ga0207682_10607975	Not Available	515	Open in IMG/M
3300025924\|Ga0207694_11209891	Not Available	639	Open in IMG/M
3300025940\|Ga0207691_10799078	All Organisms → cellular organisms → Bacteria → Proteobacteria	793	Open in IMG/M
3300026095\|Ga0207676_11578474	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300026142\|Ga0207698_11635256	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	659	Open in IMG/M
3300026291\|Ga0209890_10157188	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	752	Open in IMG/M
3300028651\|Ga0302171_10077210	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300028652\|Ga0302166_10002767	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3331	Open in IMG/M
3300028652\|Ga0302166_10043828	Not Available	927	Open in IMG/M
3300028652\|Ga0302166_10069172	All Organisms → cellular organisms → Bacteria → Proteobacteria	760	Open in IMG/M
3300028665\|Ga0302160_10131494	Not Available	572	Open in IMG/M
3300028736\|Ga0302214_1049595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	860	Open in IMG/M
3300028736\|Ga0302214_1106724	All Organisms → cellular organisms → Bacteria → Proteobacteria	595	Open in IMG/M
3300028739\|Ga0302205_10192226	Not Available	523	Open in IMG/M
3300028869\|Ga0302263_10450294	Not Available	507	Open in IMG/M
3300029923\|Ga0311347_10403522	All Organisms → cellular organisms → Bacteria → Proteobacteria	832	Open in IMG/M
3300029984\|Ga0311332_10051714	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2879	Open in IMG/M
3300029984\|Ga0311332_10376523	All Organisms → cellular organisms → Bacteria → Proteobacteria	1099	Open in IMG/M
3300029989\|Ga0311365_10197197	All Organisms → cellular organisms → Bacteria → Proteobacteria	1734	Open in IMG/M
3300029990\|Ga0311336_10359932	All Organisms → cellular organisms → Bacteria → Proteobacteria	1214	Open in IMG/M
3300029990\|Ga0311336_10759469	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	834	Open in IMG/M
3300029998\|Ga0302271_10332880	Not Available	660	Open in IMG/M
3300030000\|Ga0311337_10140860	All Organisms → cellular organisms → Bacteria → Proteobacteria	1949	Open in IMG/M
3300030002\|Ga0311350_10689526	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	917	Open in IMG/M
3300030019\|Ga0311348_11090397	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300030019\|Ga0311348_11224132	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300030047\|Ga0302286_10253731	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	885	Open in IMG/M
3300030114\|Ga0311333_11024081	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300030838\|Ga0311335_10530833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	819	Open in IMG/M
3300031232\|Ga0302323_100154917	All Organisms → cellular organisms → Bacteria → Proteobacteria	2278	Open in IMG/M
3300031232\|Ga0302323_100250537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1814	Open in IMG/M
3300031232\|Ga0302323_101304690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	813	Open in IMG/M
3300031232\|Ga0302323_101751529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	703	Open in IMG/M
3300031456\|Ga0307513_10150135	All Organisms → cellular organisms → Bacteria → Proteobacteria	2240	Open in IMG/M
3300031456\|Ga0307513_10358078	All Organisms → cellular organisms → Bacteria → Proteobacteria	1204	Open in IMG/M
3300031726\|Ga0302321_100004394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	12212	Open in IMG/M
3300031726\|Ga0302321_100709838	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1128	Open in IMG/M
3300031726\|Ga0302321_102058264	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	663	Open in IMG/M
3300031902\|Ga0302322_103350045	Not Available	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.52%
Host-Associated	Host-Associated	23.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.52%
Plants	Host-Associated → Plants	23.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	29.57%
Peat	Environmental → Terrestrial → Peat	26.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	20.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.35%
Roots	Host-Associated → Plants → Roots	1.74%
Rhizome	Host-Associated → Plants → Rhizome	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	26.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.61%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	20.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.48%
Loam	Environmental → Terrestrial → Soil → Loam	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.48%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.74%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	26.96%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.87%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.87%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	0.87%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	26.09%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.39%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	7.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.74%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.87%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.87%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.87%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.87%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.87%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.87%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	0.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.87%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.87%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003320	Sugarcane root Sample H2	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022870	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L019-104C-5	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300022906	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L223-509R-6	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300022911	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L064-202C-5	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023092	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L148-409B-2	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300023103	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L058-202B-2	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300023269	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6	Environmental	Open in IMG/M
3300023272	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L171-409R-4	Environmental	Open in IMG/M
3300023274	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L141-409B-4	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025679	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300028651	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_3	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029998	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_1	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030047	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootH2_100489434	3300003320	Sugarcane Root And Bulk Soil	MQARAIVRPLLALTFLAATALGLNNSMGDNTEVKALAEKTACGNAPCVVKTLSEQRSAFKQRFGYQTALVEKGKSTHGATIDIECARTFVLLGEYQCHVSSGGVPQVH*
Ga0063455_1008579931	3300004153	Soil	VSARSIIRPLFGIACLVGTALGLNNTYGDNTEVKALAEKVACGSASCSVKTLHESRSALKQSFGYQTALVERGKSGRSASVDVECTREYFLLGEYHCSI
Ga0070677_103068931	3300005333	Miscanthus Rhizosphere	TALGLNNTYGDNTDVKALAEKTACGTAPCVVKTLREQRSAFKQTFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVLSGGLPQVH*
Ga0070677_107016881	3300005333	Miscanthus Rhizosphere	MEARALVRPLFAVLCLTATALGLNNTYGDNAEVKTLAKAACGNAQCVVKTLREQRSAFKQSFGYQTALVEKGKSTNNASVDIECARAYVLL
Ga0070682_1006025991	3300005337	Corn Rhizosphere	VEARSLIRPLFALLCLSATALGLNNTYGDNTDVKALAEKTACGTAPCVVKTLREQRSAFKQSFGYQTALVEKGKSTNGASVDIECSRTY
Ga0070673_1008156072	3300005364	Switchgrass Rhizosphere	MEARALVRPLFAVLCLTATALGLNNTYGDNAEVKTLAEKAACGNAQCVVKTLREQRSAFKQSFGYQTALVEKGKSTNNASVDIECARAYVLLGAYQCSVVSGGLPQVH*
Ga0070672_1006496522	3300005543	Miscanthus Rhizosphere	MEARSLVRPLFALLCLGATALGLNNTYGDNSEVKALAEKTACGTTPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASIDIECARAYVLLGEYQCAVVSGGLPQLH*
Ga0070693_1008644202	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MLRPLFVVLCLSGTALGLNNTYGDNADLKVLAEKTACGASPCVVKTLNEHRSAFKQSFGYQTALVQKGKSTNGASVDIECARAYVLLGEYECHVVSGGQPQVH*
Ga0068852_1006011942	3300005616	Corn Rhizosphere	LVATALGLNNTYGDNSEVKALAEKVACGTAPCVVKTLNEQRSAFKQTFGYQTALVERGKSKNGASVDIECAREYVLLGAYQCRVKSGGVPEVH*
Ga0068866_113012801	3300005718	Miscanthus Rhizosphere	MEARALVRPLFAVLCLTATALGLNNTYGDNAEVKTLAEKAACGNAQCVVKTLREQRSAFKQSFGYQTALVEKGKSTNNASVDIECARAYVLLG
Ga0068863_1002655002	3300005841	Switchgrass Rhizosphere	VEARSIVRPLFAVLCLAATALGLNNTYGDNADVKALAEKTACGTAPCVVKTLNEHRSAFTQTFGYQTALVEKGKSTQGATVDIECARAYALVGEYECHVKSGGLPQVH*
Ga0080027_100114734	3300005993	Prmafrost Soil	MLICLGGTALGLNNTYGDDTELKALAEKTACGSAQCSVKMLNEHRSAFNAAFGFQTSLVQKGKTDRSASADVRCRRDYYLLGEYQCSVVSGGLPDTAPAH*
Ga0066789_100585991	3300005994	Soil	DQCGRRVLVGQGQTPTLLRARNGRLIVEARSITRPLFMLVCLGGTALGLNNTYGDDTELKALAEKTACGSAQCSVKMLNEHRSAFNAAFGFQTSLVQKGKTDRSASADVECRRDYYLLGEYHCSVVSGGLPDRAPAH*
Ga0066790_103477562	3300005995	Soil	LLRAGNGRLIVEARAIVRPLFMLICLGGTALGLNNTYGDDTELKALAEKTACGSAQCSVKMLNEHRSAFNAAFGFQTSLVQKGKTDRSASADVRCRRDYYLLGEYQCSVVSGGLPDTAPAH*
Ga0070716_1005329531	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RALIRPLFALLCLSATALGLNNTYGDNTEVKALAEKAACGTAPCVVKTLHEQRSAFKQAFGYQTALVEQGKSKNNATVDVECARAYVLLGGYQCNVVSGGLPQVH*
Ga0150984_1024560472	3300012469	Avena Fatua Rhizosphere	MEARAIVRPLFAVLCLAATALGLNNTYGDNADVKILAEKTACGTAPCVVKTLNEHRSAFSQTFGYQTALVEKGKSTHGATVDVECARAYALVGEYACHVKSGGPPEVH*
Ga0150984_1037856913	3300012469	Avena Fatua Rhizosphere	MEARSLVRPLFLVLCLSATALGLNNTYGDNADVKVLAEKTACGSAPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASVDIECARAYVLLGEYECHVLSGGVPQVH*
Ga0150984_1080304232	3300012469	Avena Fatua Rhizosphere	VSARSISRALIALLCIVGTALGLNNTYGDDAEVKALAEQAACGKPTCSVKLLRENRSALKQSFAFQTALVEKGKSGRGASVDIDCERALLLLGDYRCAVVSGGIPGVASPPPSAP*
Ga0150984_1097632735	3300012469	Avena Fatua Rhizosphere	VEARSIVRPLFAVLCLAATALGLNNTYGDNTEVKALAEKTACGTSPCVVKTLNEHRSAFTQTFGYQTALVEKGKSTQGATVDVECARAYALVGEYACHVKSGGLPQVH*
Ga0150984_1113430572	3300012469	Avena Fatua Rhizosphere	VSARSIIRPLFGIACLVGTALGLNNTYGDNTEVKALAEKVACGSASCSVKTLHESRSALKQSFGYQTALVERGKSGRSASIDVECTREYFLLGEYHCSIVSGGFPGSSAVAPASS*
Ga0150984_1129759952	3300012469	Avena Fatua Rhizosphere	VSARSSIRLLLMALCLIGTALGLNNTYGDDTEVKALGEKAACGSAECSVKILHESRSAFKTAFGYQTQLVEKGKATRHASVDVECRRALYLLGDYQCAIVSGGL*
Ga0150984_1208351121	3300012469	Avena Fatua Rhizosphere	VSARSSIRVLLMTLCLIGTALGLNNTYGDDTEVKALAEKAACGSAQCSVKILHESRSAFKTAFGYQTQLLEKGKATRNASVDVECQRALYLLGDYQCAIVSGGL*
Ga0150984_1214044072	3300012469	Avena Fatua Rhizosphere	MEARSLARPLFLVLCLSATALGLNNTYGDNADVKVLAEKTACGSAPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASVDIECARTYVLLGEYECHVLSGGLPQVH*
Ga0150984_1227196952	3300012469	Avena Fatua Rhizosphere	MEARAIVRPLFAVLCLAATTLGLNNTYGDNADVKTLAEKTACGTSPCVVKTLNEHRSAFTQTFGYQTALVEKGKSTQGATVDIECARAYALVGEYECHVKSGGLPQVH*
Ga0157305_100032563	3300012891	Soil	METRALVRPLFAVLCLSATALGLNNTYGDNAEVKTLAEKTACGNAPCVVKTLHEQRSAFKQSFGYQTALVERGKSTNNATVDIECARAYVLLGAYQCSVASGGLPQVH*
Ga0157309_100201033	3300012895	Soil	MEARSLVRPLFALLCLGATALGLNNTYGDNSEVKALAEKTACGTTPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASIDIECERAYVL
Ga0157309_100541412	3300012895	Soil	MEARALVRPLFAVLCLSATALGLNNTYGDNAEVKTLAEKTACGNAPCVVKTLHEQRSAFKQSFGYQTALVERGKSTNNATVDIECARAYVLLGAYQCSVASGGLPQVH*
Ga0157309_102779842	3300012895	Soil	MEARSLVRPLIALLCLGGTALGLNNTYGDDTEVKAMAEKVACGNAPCVVKTLNERRSAFKQAYGYQTALVEKGKSTKGATVDVECARAYVLLGEYSCKVTSGGLPQVH*
Ga0157292_100015504	3300012900	Soil	MEARSLVRPLFALLCLGATALGLNNTYGDNSEVKALAEKTACGTTPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASIDIECERAYVLLGEYQCAVVSGGLPQLH*
Ga0157292_101087342	3300012900	Soil	LIVEARSLVRPLFALLCLSATALGLNNTYGDNTDVKALAEKTACGTAPCVVKTLREQRSAFKQTFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVLSGGLPQVH*
Ga0157291_100048524	3300012902	Soil	ETRAQVRPLFAVLCLSATALGLNNTYGDNAEVKTLAEKTACGNAPCVVKTLHEQRSAFKQSFGYQTALVERGKSTNNATVDIECARAYVLLGAYQCSVASGGLPQVH*
Ga0157289_100143013	3300012903	Soil	METRALVRPLFAVLCLSATALGLNNTYGDNAEVKTLAEKTACGTAPCVVKTLREHRSAFTQSFGYQTALVEKGKSTQGASVDIDCARAYVLLGE
Ga0157306_102738211	3300012912	Soil	GWKWQVEAMEARSLVRPLFALLCLGATALGLNNTYGDNSEVKALAEKTACGTTPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASIDIECERAYVLLGEYQCAVVSGGLPQLH*
Ga0157298_101410831	3300012913	Soil	SLVRPLFALLCLSATALGLNNTYGDNTDVKALAEKTACGTAPCVVKTLREQRSAFKQTFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVLSGGLPQVH*
Ga0137404_109685732	3300012929	Vadose Zone Soil	MLLCLAGTALGLNNTYGDDTELKALAEKTACGNAGCSVKMLNEHRSAFSAAFGYQTSLVQKGKTDRSASADVECRRTYYLLGEYHCAVVSGGLPDAPAPH*
Ga0164241_100269444	3300012943	Soil	MEARAIVRPLFAVLCLAATALGLNNTYGDNADVKTLAEKTACGTAPCVVKTLNEHRSAFSQTFGYQTALVEKGKSTHGATVDVECARAYALVGEYACHVKSGGPPEVH*
Ga0164241_104178302	3300012943	Soil	MATSQLTRPLFMVLCLGATALGLNNTYGDNADVRVLAEQTACGSAHCGVRKLSEGRSPFKQSFGFQTALVERGKSTQNASVDVECRREYWLVGDYRCAIVSGGLPSKP*
Ga0164309_100057974	3300012984	Soil	VEARSLVRPLFAVLCLGATALGLSNTYGDNSDVKALAEKTACGTTPCVVKTLNEHRSAFAQTFGYQTALVEKGKSTHNATVDIECTRAYVLLGEYACHVKSGGLTQVH*
Ga0164309_100133303	3300012984	Soil	LNVEARAIIRPLFAVLCLGATALGLNNTYGDNSEVKALAEKTACGNAPCVVKTLNEQRSAFKQTFGYQTALVEKGKSTQAATVDIECARAYVLLGEYECHVKSGGLPQVH*
Ga0164308_119218131	3300012985	Soil	SWKWRVEMEARALVRPLFAVLCLTATALGLNNTYGDNAEVKTLAEKAACGNAQCVVKTLREQRSAFKQSFGYQTALVEKGKSTNNASVDIECARAYVLLGAYQCSVVSGGLPQVH*
Ga0164307_111845132	3300012987	Soil	VEARSLVRPLFAALCLGATALGLFNTYGDNSEVKALAEKTACGTAPCVVKTLNEHRSAFAQTFGYQTALVEKGKSTRNATVDIECARAYVLLGEYECHVKSGGLTQVH*
Ga0164306_101143742	3300012988	Soil	VEARSLVRPLFAVLCLGATALGLSNTYGDNSEVKALAEKTACGAAPCVVKTLNEHRSAFAQTFGYQTALVEKGKSTHNATVDIECARAYVLFGEYACHVKSGGLTQVH*
Ga0164306_102344282	3300012988	Soil	RPLFAGLCLVATALGLNNTYGDNSEVKALAEKVACGTAPCVVKTLNEQRSAFKQTFGYQTALVERGKSKNGASVDIECAREYVLLGAYQCRVKSGGVPEVH*
Ga0164306_107310962	3300012988	Soil	LRAGNGRLNVEARSLVRPLFAIACLAATALGLNNTYGDNTELKALAEKTACGSAPCVVKTLNEHRSAFKQSFGYQTALVEKGKSQNGASIDIECARAYVLLGEYSCSVVSGGLPQQH*
Ga0120158_101703792	3300013772	Permafrost	LIVEARSIIRPLFMLVCLGGTALGLNNTYGDDTELKALAEKTACGSAQCSVKVLNEHRSAFNAAFGFQTSLVQKGKTDRSASADVECRRDYYLMGEYHCSLVSGGLPDRAPAH*
Ga0157376_121202651	3300014969	Miscanthus Rhizosphere	LGATALGLNNTYGDNSEVKALAERTACGNAPCVVKTLHEHRSAFKQSFGYQTALVEKGKSKNGASVDIDCARAYVLLGEYQCTVVSGGLPQVH*
Ga0157376_121882342	3300014969	Miscanthus Rhizosphere	MEARSIVRPLFAVLCLAATALGLNNTYGDNADVKALAEKTACGTAPCVVKTLNEHRSAFTQTFGYQTALVEKGKSTQGATVDIECARAYALVGEYECHVKSGGLPQVH*
Ga0157376_125108222	3300014969	Miscanthus Rhizosphere	LNVETRSLVRPLFAVLCLAATALGLNNTYGDNTDVKALAEKTACGTAPCVVKTLREHRSAFTQSFGYQTALVEKGKSTHGASVDIDCARAYVLLGEYQCSVVSGGLPQVH*
Ga0137414_12554283	3300015051	Vadose Zone Soil	LEARSVLRPLFAVLCLGGTALGLNNTYGDNSDVKALAEKTACGSAQCSVKTLSEARSALKQSFGYQTALVEQGKAAQGASADVVCEREYVLLGAYKCTVVSGGLPAAH*
Ga0137403_104311972	3300015264	Vadose Zone Soil	CLGATALGLNNTYGDDTELKALAERAACGSPQCSVKMLNEHRSAFSAGFGFQTSLVQKGKVDRNASADVGCRRDFYLLGDYRCALTSGGLPDSPR*
Ga0190273_118657702	3300018920	Soil	LAAAELVRPLFMLLCLSATALGLNTTYGDNADIRVLAEQAACGRVHCGVTRLNEGRSPFKQSFGFQTALVERGKSTRNASVDVECRREYWLLGEYHCSIVSGGLPSP
Ga0210392_100016527	3300021475	Soil	MLLCLAGTALGLNNTYGDDTELKALAEKTACGKPGCSVKMLNEHRSAFNAAFGYQTSLVQKGKTDRSASADVECRRSYYLLGEYQCAVVSGGLPDTPASH
Ga0247782_10029353	3300022870	Plant Litter	MEARALVRPLFAVLCLTATALGLNNTYGDNAEVKTLAEKAACGNAQCVVKTLREQRSAFKQSFGYQTALVEKGKSTNNASVDIECARAYVLLGAYQCSVVSGGLPQVH
Ga0247778_100023823	3300022894	Plant Litter	VEARALVRPLFAIVCLAATALGLNNTYGDDTEVKALAEKTACGSTPCVVKTLHEQRSAFKQSYGYQTALVEKGKTSKGASVDIECARAYVLLGEYTCKVLSGGLPQVH
Ga0247766_10006472	3300022906	Plant Litter	VEARSIVRPLFAVLCLAATALGLNNTYGDNADVKALAEKTACGTTPCVVKTLNEHRSAFTQTFGYQTALVEKGKSTQGATVDIECARAYALVGEYECHVKSGGLPQVH
Ga0247779_10800982	3300022908	Plant Litter	LSVEARSIVRPLFAVVCLTATALGLNNTYGDASEVKALAEKTACGQAPCVVKTLSEQRSAFKQVFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVKSGGLPQLH
Ga0247779_11543302	3300022908	Plant Litter	SVVGEGQAAAVLRAGNGGLSVEARSIVRPLFAVLCLAATALGLNNTYGDNADVKALAEKTACGTTPCVVKTLNEHRSAFTQTFGYQTALVEKGKSTQGATVDIECARAYALVGEYECHVKSGGLPQVH
Ga0247768_11062962	3300022910	Plant Litter	MEARALIRPIFAVVCLGATALGLNNTYGDDTEVKALAEKAACGMAPCVVKTLSEHRSAFKQTFGYQTALVEKGKSKNGASVDIECARAYVLVGEYECSVVSGGLPQVH
Ga0247783_10006529	3300022911	Plant Litter	MEARSLVRPLFALLCLGATALGLNNTYGDNSEVKALAEKTACGTTPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASIDIECERAYVLLGEYQCAVVSGGLPQLH
Ga0247783_10405942	3300022911	Plant Litter	LIVEARSLVRPLFALLCLSATALGLNNTYGDNTDVKALAEKTACGTAPCVVKTLREQRSAFKQTFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVLSGGLPQVH
Ga0247783_10452142	3300022911	Plant Litter	LGLNNTYGDNAEVKTLAEKTACGTAPCVVKTLREHRSAFTQSFGYQTALVEKGKSTQGASVDIDCARAYVLLGEYQCSVVSGGLPQVH
Ga0247783_12560942	3300022911	Plant Litter	MQPRALVRPLFAVLCLSATALGLNNTYGDNSELKTLAEKTACGSAPCVVKTLREQRSAFKQSFGYQTALVEKGKSKNDATVDIECSRAYVLLGAYQCRVLSGGLPQVH
Ga0247777_10694411	3300022917	Plant Litter	STSWKWRVEMEARALVRPLFAVLCLTATALGLNNTYGDNAEVKTLAEKAACGNAQCVVKTLREQRSAFKQSFGYQTALVEKGKSTNNASVDIECARAYVLLGAYQCSVVSGGLPQVH
Ga0247740_100098713	3300023092	Plant Litter	VEARSLFRPLFAVLCLTATALGLNNTYGDGSEVKALAEKTACGQAPCVVKTLNEQRSAFKQVFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCHVKSGGLPQVH
Ga0247757_100034317	3300023097	Plant Litter	VEARSIVRPLFAVVCLTATALGLNNTYGDASEVKALAEKTACGQAPCVVKTLSEQRSAFKQVFGYQTALVEKGKSTNSASVDIECTRAYVLLGEYQCSVKSGGLPQLH
Ga0247739_100653981	3300023103	Plant Litter	GGLSVEARSLFRPLFAVLCLTATALGLNNTYGDGSEVKALAEKTACGQAPCVVKTLNEQRSAFKQVFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCHVKSGGLPQVH
Ga0247780_10055952	3300023265	Plant Litter	MVGQRQATALLRAGNGGLSVEARALVRPLFAIVCLAATALGLNNTYGDDTEVKALAEKTACGSTPCVVKTLHEQRSAFKQSYGYQTALVEKGKTSKGASVDIECARAYVLLGEYTCKVLSGGLPQVH
Ga0247765_10953801	3300023268	Plant Litter	GLNNTYGDDTEVKALAQKAACGTTPCVIKTLHEQRSAFKQSYGYQTALVEKGKSTNNASVDIECARAYVLLGEYTCKVLSGGLPQVH
Ga0247773_10265172	3300023269	Plant Litter	MEARSLVRPLIALLCLGGTALGLNNTYGDDTEVKAMAEKVACGNAPCVVKTLNERRSAFKQAYGYQTALVEKGKSTKGATVDVECARAYVLLGEYSCKVTSGGLPQVH
Ga0247773_10528732	3300023269	Plant Litter	VEARSLVRPLFAVLCLAATGLGLNNTYGDNAEVKTLAEKTACGTAPCVVKTLREHRSAFTQSFGYQTALVEKGKSTQGASVDIDCARAYVLLGEYQCSVVSGGLPQVH
Ga0247773_10621212	3300023269	Plant Litter	METRALVRPLFAVLCLSATALGLNNTYGDNAEVKTLAEKTACGNAPCVVKTLHEQRSAFKQSFGYQTALVERGKSTNNATVDIECARAYVLLGAYQCSVASGGLPQVH
Ga0247760_10025672	3300023272	Plant Litter	MEARSLVRPLFAILCLGATALGLNNTYGDDTEVKALAEKTACGSAPCVVKTLREHRSAFKQSYGYQTALVEKGKSTNGASVDIECARAYVLLGEYQCSVVSGGLPQVH
Ga0247760_11744451	3300023272	Plant Litter	LLCLGATALGLNNTYGDNSEVKALAEKTACGTTPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASIDIECERAYVLLGEYQCAVVSGGLPQLH
Ga0247763_11355582	3300023274	Plant Litter	TALGLNNTYGDNADVKTLAEKTACGNAPCVVKTLNEHRSAFTQTFGYQTALVEKGKSTHGATVDIECSRAYALLGEYECHVKSGGAPQVH
Ga0247776_100697011	3300023275	Plant Litter	MVGQRQAAPVLRTGNGGLSVEARSIVRPLFAVVCLTATALGLNNTYGDASEVKALAEKTACGQAPCVVKTLSEQRSAFKQVFGYQTALVEKGKSTNSASVDIECARAYVLL
Ga0207933_10085886	3300025679	Arctic Peat Soil	MLVCLGGTALGLNNTYGDDTELKALAEKTACGSAKCSVKMLNEHRSAFNAAFGFQTSLVQKGKTDRSASADVECRRDYYLLGEYHCSVVSGGLPERAPAH
Ga0207682_106079751	3300025893	Miscanthus Rhizosphere	LFALLCLSATALGLNNTYGDNTDVKALAEKTACGTAPCVVKTLREQRSAFKQTFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVLSGGLPQVH
Ga0207694_112098912	3300025924	Corn Rhizosphere	LGATALGLSNTYGDNSDVKALAEKTACGATPCVVKTLNEHRSAFAQTFGYQTALVEKGKSTHNATVDIECARAYVLLGEYTCHVKSGGLTQVH
Ga0207691_107990782	3300025940	Miscanthus Rhizosphere	MEARSLVRPLFALLCLGATALGLNNTYGDNSEVKALAEKTACGTTPCVVKTLNEHRSAFKQSFGYQTALVEKGKSTNGASIDIECARAYVLLGEYQCAVVSGGLPQLH
Ga0207676_115784742	3300026095	Switchgrass Rhizosphere	VVGERQAPAILRAGNGGLSVEARSIVRPLFAVLCLAATALGLNNTYGDNADVKALAEKTACGTAPCVVKTLNEHRSAFTQTFGYQTALVEKGKSTQGATVDIECARAYALVGENECHVKSGGLPQVH
Ga0207698_116352562	3300026142	Corn Rhizosphere	LVATALGLNNTYGDNSEVKALAEKVACGTAPCVVKTLNEQRSAFKQTFGYQTALVERGKSKNGASVDIECAREYVLLGAYQCRVKSGGVPEVH
Ga0209890_101571881	3300026291	Soil	PDQCGRRVLVGQGQTPTLLRARNGRLIVEARAIVRPLFMLVCLGGTALGLNNTYGDDTELKALAEKTACGSAQCSVKMLNEHRSAFNAAFGFQTSLVQKGKTDRSASADVECRRDYYLLGEYHCSVVSGGLPDRAPAH
Ga0302171_100772102	3300028651	Fen	VGQRQAATLLRAGNGGLSVESRSLVRPLFAILCLAATALGLNNTYGDDTEVKALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVVSGGLPQVH
Ga0302166_100027673	3300028652	Fen	VEARSLVRPLFAALCLTATALGLNNTYGDDTDVKALAEKVACGTTPCVVKTLSEHRSAFKHSFGYQTALVEKGKSKNSATVDIDCTRSYVLLGEYRCAVVSGGLPQLH
Ga0302166_100438282	3300028652	Fen	FAALCLTATALGLNNTYGDDTDVKALAEKVACGATPCVVKTLSEHRSAFKHSFGYQTALVEKGKSKNSATVDIDCTRSYVLLGEYRCTVVSGGLPQLH
Ga0302166_100691722	3300028652	Fen	VGQRQAATLLRAGNGGLSVESRSLVRPLFAILCLAALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVVSGGLPQVH
Ga0302160_101314942	3300028665	Fen	VEARSLVRPLFAALCLTATALGLNNTYGDDTDVKALAEKVACGTTPCVVKTLSEHRSAFKHSFGYQTALVEKGKSKNSATVDIDCTRSYVLLGEYRCTVVSGGLPQLH
Ga0302214_10495951	3300028736	Fen	LLRARDGGLSMEARALVRPLFAVICLGATALGLNNTYGDDTEVKALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVVSGGLPQVH
Ga0302214_11067242	3300028736	Fen	VEAHSLVRPLFAALCLTATALGLNNTYGDDTDVKALAEKVACGATPCVVKTLSEHRSAFKHSFGYQTALVEKGKSKNSATVDIDCTRSYVLLGEYRCTVVSGGLPQLH
Ga0302205_101922262	3300028739	Fen	HSLVRPLFAALCLTATALGLNNTYGDDTDVKALAEKVACGATPCVVKTLSEHRSAFKQSFGYQTALVEKGKSKNSASVDIDCTRSYVLLGEYRCTVVSGGLPQLH
Ga0302263_104502942	3300028869	Fen	FAILCLAATALGLNNTYGDDTEVKALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVVSGGLPQVH
Ga0311347_104035221	3300029923	Fen	VGQRQAATLLRAGNGGLSVESRSLVRPLFAILCLAATALGLNNTYGDDTEVKALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQC
Ga0311332_100517141	3300029984	Fen	VVGQRQAATLLRAGNGGLSVESRSLVRPLFAILCLAATALGLNNTYGDDTEVKALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVVSGGLPQVH
Ga0311332_103765232	3300029984	Fen	VEAHSLVRPLFAALCLTATALGLNNTYGDDTDVKALAEKVACGTTPCVVKTLSEHRSAFKHSFGYQTALVEKGKSKNSATVDIDCTRSYVLLGEYRCAVVSGGLPQLH
Ga0311365_101971973	3300029989	Fen	MEARALVRPLFAVICLGATALGLNNTYGDDTESKALAEKVACGTATCSVKLLHEGRSAFKQSFGYQTALVQKGKGPRGASVDVACQRQYILLGEYRCAITSGGLPESSP
Ga0311336_103599322	3300029990	Fen	VEAHSLVRPLFAALCLTATALGLNNTYGDDTDVKALAEKVACGTTPCVVKTLSEHRSAFKHSFGYQTALVEKGKSKNSATVDIDCTRSYVLLGEYRCTVVSGGLPQLH
Ga0311336_107594692	3300029990	Fen	MEARALVRPLFAVICLGATALGLNNTYGDDTESKALAEKVACGTATCSVKLLHEGRSAFKQSFGFQTALVQKGKVPRGASVDVACQRQYILLGEYRCAIVSGGLPEASP
Ga0302271_103328802	3300029998	Bog	VESRSLVRPLFAILCLAATALGLNNTYGDDTEVKALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVVSGGLPQVH
Ga0311337_101408602	3300030000	Fen	MEARALVRPIFAVICLGATALGLNNTYGDDTELKALAEKVACGTATCSVKLLHEGRSAFKQSFGYQTALVQKGKGPRGASVDVACQRQYILLGEYRCAITSGGLPESSP
Ga0311350_106895261	3300030002	Fen	IFAVICLGATALGLNNTYGDDTELKALAETVACGTATCSVKLLHEGRSAFKQSFGYQTALVQKGKGPRGASVDVACQRQYILLGEYRCAITSGGLPESSP
Ga0311348_110903971	3300030019	Fen	MEARALVRPIFAVICLGATALGLNNTYGDDTELKALAEKVACGTATCSVKLLHEGRSAFKQSFGYQTALVQKGKGPRGASVDVACQRQYILLGEYRCAIISGGLPEASP
Ga0311348_112241322	3300030019	Fen	VAARSLVRPLLMALCLVGTGLGLNNTYGDDTEVKALAETAACGSAKCSVKLLHENRSAFTQAFGFQTSLVAKGKTDRSASVDVNCQRSLYLLGEYQCVIVSGGL
Ga0302286_102537312	3300030047	Fen	MEARALVRPLFAVICLGATALGLNNTYGDDTELKALAEKVACGTATCSVKLLHEGRSAFKQSFGYQTALVQKGKGPRGASVDVACQRQYILLGEYRCAITSGGLPESSP
Ga0311333_110240812	3300030114	Fen	MEARALVRPIFAVICLGATALGLNNTYGDDTELKALAEKVACGTATCSVKLLHEGRSAFKQSFGFQTALVQKGKVPRGASVDVACQRQYILLGEYRCAIVSGGL
Ga0311335_105308331	3300030838	Fen	LFAILCLTATALGLNNTYGDDTEVKALAEKAACGTAPCVVKTLSEHRSAFKQSFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCSVVSGGLPQVH
Ga0302323_1001549171	3300031232	Fen	QASALLRARDGGLSMEARALVRPLFAVICLGATALGLNNTYGDDTESKALAEKVACGTATCSVKLLHEGRSAFKQSFGFQTALVQKGKVPRGASVDVACQRQYILLGEYRCAIVSGGLPEASP
Ga0302323_1002505373	3300031232	Fen	GGLIVEARSLVRPLFAALCLTATALGLNNTYGDGTEVKALAEKTACGTTPCVVKTLSEHRSAFKQSFGYQTALVEKGKSKNSASVDIDCTRSYVLLGEYRCTVVSGGLPQLH
Ga0302323_1013046902	3300031232	Fen	RSLVRPLFAALCLTATALGLNNTYGDDTDVKALAEKVACGTTPCVVKTLSEHRSAFKHSFGYQTALVEKGKSKNSATVDIDCTRSYVLLGEYRCTVVSGGLPQLH
Ga0302323_1017515291	3300031232	Fen	GLNNTYGDNTEVRALAEKSACGPPACSVKLLREARSALKQSFGFQTSLEQKSKASRSASVDVVCQREYFLIGEYRCVVASGGLPEAR
Ga0307513_101501352	3300031456	Ectomycorrhiza	VEARALIRPLVAIICLGGTALGLNNTYGDNAEVKALAEKSACGSAQCSVKSLHEGRSAFKQSFGFQTALVQKGKADRSASVDVTCQREYFLVGEYHCAVVSGGLPEAR
Ga0307513_103580782	3300031456	Ectomycorrhiza	VEARKIFRPLFAVICLGATALGLNNTYGDNTEVKVLAEKTACGKPSCSVKTLHEGRSAFKQSFGYQTALVEKGHTDRSASVDVECERQYALVGEYHCAIVSGGLPDSAREH
Ga0302321_1000043944	3300031726	Fen	VEARSLVRPLFAALCLTATALGLNNTYGDGTEVKALAEKTACGTTPCVVKTLSEHRSAFKQSFGYQTALVEKGKSKNSASVDIDCTRSYVLLGEYRCTVVSGGLPQLH
Ga0302321_1007098381	3300031726	Fen	TALGLNNTYGDDTELKALAEKVACGTATCSVKLLHEGRSAFKQSFGYQTALVQKGKGPRGASVDVACQRQYILLGEYRCAITSGGLPESSP
Ga0302321_1020582642	3300031726	Fen	TSHHPFTSWKWRAEVSARAIVRSLFAIVCLAATALGLNNTYGDNSEVKAIAEKVACGSAACSVKMLHESRSALKQSFGYQTALVEKGKSGRSASVDVECTREYFLLGEYRCAVVSGGLPGVASAAPAPP
Ga0302322_1033500451	3300031902	Fen	TALGLNNTYGDNSEVKAIAEKVACGSAACSVKMLHESRSALKQSFGYQTALVEKGKSGRSASVDVECTREYFLLGEYRCAVVSGGLPGVASAAPAPP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F080409

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences