Sample 3300023092

3300023092: Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L148-409B-2

Overview

Basic Information
IMG/M Taxon OID	3300023092 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0095510 \| Gp0290910 \| Ga0247740
Sample Name	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L148-409B-2
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	582255311
Sequencing Scaffolds	54
Novel Protein Genes	55
Associated Families	50

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	11
All Organisms → cellular organisms → Bacteria	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia oxyphila	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1
Not Available	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil Microbial Communities From Arlington Agricultural Research Station In Wisconsin And Kellogg Biological Station In Michigan, Replicating The Bioenergy Cropping Systems Trials (Bcsts)
Type	Environmental
Taxonomy	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter → Soil Microbial Communities From Arlington Agricultural Research Station In Wisconsin And Kellogg Biological Station In Michigan, Replicating The Bioenergy Cropping Systems Trials (Bcsts)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → agricultural field → plant litter
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	USA: Wisconsin
Coordinates	Lat. (^o)	43.3	Long. (^o)	-89.38	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F003908	Metagenome / Metatranscriptome	462	Y
F013427	Metagenome / Metatranscriptome	271	Y
F014032	Metagenome / Metatranscriptome	266	Y
F018530	Metagenome / Metatranscriptome	234	Y
F018938	Metagenome / Metatranscriptome	232	Y
F021064	Metagenome / Metatranscriptome	220	Y
F021141	Metagenome	220	Y
F022464	Metagenome / Metatranscriptome	214	Y
F028899	Metagenome / Metatranscriptome	190	N
F031059	Metagenome	183	Y
F031944	Metagenome	181	Y
F036939	Metagenome	169	Y
F038824	Metagenome / Metatranscriptome	165	Y
F039203	Metagenome / Metatranscriptome	164	Y
F042447	Metagenome / Metatranscriptome	158	N
F045192	Metagenome / Metatranscriptome	153	Y
F045452	Metagenome / Metatranscriptome	153	Y
F046467	Metagenome / Metatranscriptome	151	N
F047388	Metagenome / Metatranscriptome	150	Y
F049178	Metagenome / Metatranscriptome	147	Y
F056729	Metagenome	137	Y
F056846	Metagenome / Metatranscriptome	137	Y
F064330	Metagenome	128	Y
F065834	Metagenome / Metatranscriptome	127	Y
F065927	Metagenome	127	Y
F067906	Metagenome / Metatranscriptome	125	Y
F071415	Metagenome	122	Y
F072526	Metagenome / Metatranscriptome	121	Y
F073001	Metagenome / Metatranscriptome	120	Y
F075793	Metagenome / Metatranscriptome	118	Y
F076250	Metagenome	118	Y
F076755	Metagenome / Metatranscriptome	117	Y
F080409	Metagenome	115	Y
F080470	Metagenome	115	Y
F081528	Metagenome / Metatranscriptome	114	Y
F083424	Metagenome	113	Y
F084632	Metagenome / Metatranscriptome	112	Y
F085051	Metagenome / Metatranscriptome	111	Y
F085758	Metagenome	111	Y
F085908	Metagenome / Metatranscriptome	111	Y
F090800	Metagenome / Metatranscriptome	108	Y
F091945	Metagenome / Metatranscriptome	107	Y
F092127	Metagenome / Metatranscriptome	107	Y
F093921	Metagenome / Metatranscriptome	106	Y
F095727	Metagenome / Metatranscriptome	105	N
F097562	Metagenome / Metatranscriptome	104	Y
F098190	Metagenome	104	Y
F098300	Metagenome / Metatranscriptome	104	Y
F099528	Metagenome	103	N
F104314	Metagenome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0247740_1000005	All Organisms → cellular organisms → Bacteria → Proteobacteria	112418	Open in IMG/M
Ga0247740_1000067	All Organisms → cellular organisms → Bacteria → Proteobacteria	49690	Open in IMG/M
Ga0247740_1000124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	39896	Open in IMG/M
Ga0247740_1000131	All Organisms → cellular organisms → Bacteria → Proteobacteria	39360	Open in IMG/M
Ga0247740_1000146	All Organisms → cellular organisms → Bacteria → Proteobacteria	36947	Open in IMG/M
Ga0247740_1000155	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	35811	Open in IMG/M
Ga0247740_1000167	All Organisms → cellular organisms → Bacteria → Proteobacteria	35170	Open in IMG/M
Ga0247740_1000184	All Organisms → cellular organisms → Bacteria → Proteobacteria	33879	Open in IMG/M
Ga0247740_1000365	All Organisms → cellular organisms → Bacteria	22990	Open in IMG/M
Ga0247740_1000373	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	22701	Open in IMG/M
Ga0247740_1000381	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	22461	Open in IMG/M
Ga0247740_1000448	All Organisms → cellular organisms → Bacteria → Proteobacteria	20002	Open in IMG/M
Ga0247740_1000488	All Organisms → cellular organisms → Bacteria	19118	Open in IMG/M
Ga0247740_1000560	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	17677	Open in IMG/M
Ga0247740_1000631	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	16240	Open in IMG/M
Ga0247740_1000667	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	15665	Open in IMG/M
Ga0247740_1000803	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia oxyphila	14064	Open in IMG/M
Ga0247740_1000976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	12685	Open in IMG/M
Ga0247740_1000987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	12589	Open in IMG/M
Ga0247740_1001023	All Organisms → cellular organisms → Bacteria	12307	Open in IMG/M
Ga0247740_1001093	All Organisms → cellular organisms → Bacteria	11897	Open in IMG/M
Ga0247740_1001281	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	10916	Open in IMG/M
Ga0247740_1001456	All Organisms → cellular organisms → Bacteria	10130	Open in IMG/M
Ga0247740_1002234	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	7988	Open in IMG/M
Ga0247740_1003400	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	6422	Open in IMG/M
Ga0247740_1003439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	6381	Open in IMG/M
Ga0247740_1003613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6187	Open in IMG/M
Ga0247740_1003938	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5885	Open in IMG/M
Ga0247740_1004952	All Organisms → cellular organisms → Bacteria → Proteobacteria	5135	Open in IMG/M
Ga0247740_1006966	All Organisms → cellular organisms → Eukaryota → Opisthokonta	4211	Open in IMG/M
Ga0247740_1011525	All Organisms → cellular organisms → Bacteria	3124	Open in IMG/M
Ga0247740_1013197	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2873	Open in IMG/M
Ga0247740_1023773	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	2002	Open in IMG/M
Ga0247740_1030513	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
Ga0247740_1039513	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1499	Open in IMG/M
Ga0247740_1044121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1411	Open in IMG/M
Ga0247740_1054900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1254	Open in IMG/M
Ga0247740_1055713	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1243	Open in IMG/M
Ga0247740_1064380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1150	Open in IMG/M
Ga0247740_1066246	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
Ga0247740_1083398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1004	Open in IMG/M
Ga0247740_1095376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	936	Open in IMG/M
Ga0247740_1097927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	924	Open in IMG/M
Ga0247740_1110425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	867	Open in IMG/M
Ga0247740_1113443	Not Available	855	Open in IMG/M
Ga0247740_1129068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	798	Open in IMG/M
Ga0247740_1168357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	693	Open in IMG/M
Ga0247740_1178058	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	673	Open in IMG/M
Ga0247740_1198969	Not Available	634	Open in IMG/M
Ga0247740_1200694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	631	Open in IMG/M
Ga0247740_1210134	Not Available	616	Open in IMG/M
Ga0247740_1251205	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	559	Open in IMG/M
Ga0247740_1293062	Not Available	514	Open in IMG/M
Ga0247740_1306772	Not Available	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0247740_1000005	Ga0247740_100000593	F085051	MTARSADISLAELLALHQKSHGSARLLQNLGDGFLYQKNPFFRRVRDAARARGIGFTLEDPGNYFAFPLVALDTVLKTRSVPYRANYAALAAFERARPGFFTLADLHKNRPLPNYILHESAHALAFHELFGRPRDTHAALSDPSKLVQIMLGEAYAMTAEYFAACAVSGPLHSWFFSINSYRHRTPAKKAVGELVTRLGLPLLVWLVLSAFLENNFFVERLPMTTLERALELYPLGKGPAVSRADRLRLCRALSALMVMNPEFREDTARLFLTMHGHRRNIRRVLSEEPLDLIAKDAALPAQLSRLVRVLCD
Ga0247740_1000067	Ga0247740_100006713	F091945	MSNRLSRDTEDAAKVLSALRDKYHPRETLEEKLSAAEDLRAKLINVATGIRQWSIKASGDDTLVTLNQAGTVRVHTDVETGAILLSTGDDAMHAPALEYDPVLHEWVGSEVDTEVVQPPGEKRPRKAALVALTERIVSLLEKPSAS
Ga0247740_1000124	Ga0247740_100012427	F076250	VDQYDIIAVIVGVMFTLRKLDTQSRTAAQYPHVDAEDFLRWQRRSAAAYAPGAYASFFRVLFHFGFMRYTASHQLAPLTFARVALLVDALWLVCVVYTLINAHFAREMRKKLGITLDKPQPPRSDPGIG
Ga0247740_1000131	Ga0247740_100013118	F084632	VTERDDIEARLARLSGATDALRPSAGFSSRVMLAIERENAPSFFETTWFSARRLLPVAAIAAAMAVVWAVQVDGTVDDEMATSYAAMELE
Ga0247740_1000146	Ga0247740_100014612	F045192	MTNRPHRTDLDLTVGPQARDEDSSVRERASASSRPPRSPRQSDPNLSLDERLVRKLAEAAAMLAKLEPQDARARLLHIAMLRKDEPLLDGILAELAMPERAAVRRSR
Ga0247740_1000155	Ga0247740_100015521	F099528	MAACAAFAIGLWFTSFAGAAAPSLMERLISAQAPLQSKLDEPVDPHELASAIASVPKITREWAALILTVAAHESALSARIARGEYKDYEGDSFRNHEGKVQHRAWGLWQAHKNRLNESAWGSPDIGVQTEEAARALRRAFYTCNGKGRSHSDWARSTINAYSGRRCDASWPGLEKRLSTYKQVLHAL
Ga0247740_1000167	Ga0247740_100016723	F065927	MDPNTRPVLKSIASSPVRPFQALDHFVTSSGMRVTYYALSLDKVPADFFADPDGAWTYELLSRAAGFSSHSGVAIGALTAEFNGHPEGAAVVTLDALTRPYVAIVECPIAYQYVEQAESSASSAA
Ga0247740_1000167	Ga0247740_100016724	F046467	MAQNRTRLFPSQATWGTLENVSDLRDPDRDPDHLLAPERLIELEKGAEPARQRLSELPAPLFELVQQWLAAELSVARERALEVADFEFAECVCEMEQRLCFPGSFMRDAQASLRIQAVLGARSQFRVIQGGG
Ga0247740_1000184	Ga0247740_100018429	F072526	VEAVAHQELTETLSALEALHEAECVVLTKLDRAALDGITEQKLALCARVEALAAVEPPRAEHRGSLERIRRLAFKNRLLAMHARDAVRTVLTEAGLTPPTQRFGSVRPNAIQDGVRVNWK
Ga0247740_1000365	Ga0247740_100036511	F056846	MSDAPPPPRETVEVIDEERIVERGTAQVNWFVRLNDAWVHVSAWAGARSERLDAGAGTVWQSRTEIDVPRGARLMRVESRPSSYARESPLEYLTRGAPSKSRKLRRNYYFVGRAGALIATPDGPE
Ga0247740_1000373	Ga0247740_100037320	F071415	VAPRYAKFLFWTSLCLATPLFGACGASSAPVSSVATANQRLGGSWRLQSFAPLVSLDLPLQAVLSAEVGTLVVSFNQGQFSAVGPGVTFNGRYEVTSASGDQLALVLYDPQNVGYHFTAQFAGNLLHFQANDKPWVGVGALERA
Ga0247740_1000381	Ga0247740_10003812	F083424	MDALLKELKVQGVALSSDSGEALESAGNFDVDTLCAVASVAAGQLRDIGDVLSAGRLERWYLVTEQQAYYVSERAGSRLVAAGEAVKNAETTSKALHRASR
Ga0247740_1000448	Ga0247740_10004481	F090800	VRYVVYDPKDPRKGQTLADPALGQIVLGQGPTITKALAAATASAPLSSGSVVWDRQ
Ga0247740_1000488	Ga0247740_10004889	F047388	MSVNSESHPEAWRCAHGARWRLLESYALARQEGLASPVGLVADLRHPRAVQVLRQLMLSPSTNQLDPLYAGCVERGALCSALMPISPKLAELLFSRGDEAGCWTALVLQHEEVVLSATWQELISGGTARASVGQRSERRR
Ga0247740_1000560	Ga0247740_100056010	F085758	MRSVPREQTLIFPLGSVFPNAIRFVASWKQKGDAEPRGGVSLSFEHAPPLQIRQHPRLPNGDYIVTIDILQAPTRAPEPTEVHAARAGETARGREGLQTNIERRVTLDGGEALIALAADPRDPSVSE
Ga0247740_1000631	Ga0247740_100063114	F098300	MLIESTEQFQAAAGIAIQRGPNEVPESDFEQLPVATRTKLRILQEHGVLRLRPSNPDEREARTGEGK
Ga0247740_1000667	Ga0247740_100066710	F073001	MVAGIALVAFLLVYQLGGPRQLGWLVALPLVASTYMVISGIFGICIIHGLRGDRRADHGPEVVLDPESRSRMRNRALLAVSASIVIGCGFAAAFVAHG
Ga0247740_1000803	Ga0247740_10008035	F038824	MQFVVKGMVQVAGTTFRIVRIERGRYDVVRILDDSRLGSFWCEPTFAVSECAERELLREVARCAIKGGKTTWMGRLDLTG
Ga0247740_1000976	Ga0247740_10009768	F095727	VSTKQLPRDTVRDLLGIARALFVVRDNQGALQVELDRIREVSAWLVDALELSRTAPDTLGHRAAWAKAERATAVLSELLLVHDESTKRLVGAWAERLSARGR
Ga0247740_1000987	Ga0247740_100098713	F080409	VEARSLFRPLFAVLCLTATALGLNNTYGDGSEVKALAEKTACGQAPCVVKTLNEQRSAFKQVFGYQTALVEKGKSTNSASVDIECARAYVLLGEYQCHVKSGGLPQVH
Ga0247740_1001023	Ga0247740_100102314	F056729	AERVMNPRGDGMTAPRADRGPDGRLKAWVCNAWDRIRLRKCADIVQERFGGEARDRVGGADLVFWDFMVGNVLVTVHLEQGVGIAVLANDAAPASEALVLEIAQYLVEHAQLSAVSG
Ga0247740_1001093	Ga0247740_100109311	F081528	MQDDIIVAEFAEAWLAKFPRIEERGLGPRLLAALAGMSGGPNAVDDLDDIEVIAAALLELVVMLKASPGGLATHFPALFGSALKGKAGLS
Ga0247740_1001281	Ga0247740_10012815	F065834	MKNIKKIALFLLVAGMVVVSSCNKNYYSGSGKGGKNCGCPSHKGMSGY
Ga0247740_1001456	Ga0247740_10014567	F098190	MVARRCALLSLLLALLPACAGPNSRLVTVRAGDGSGAVDFAVKNATDVPINSLYIAKTERVDAAGQNLDDDSPQGAELWGSDLLTHSAIGVGRRVQVDVPPGTWDVRALDRGRRYQHITGLRIAAGGRYILELNDGGWRTR
Ga0247740_1002234	Ga0247740_10022347	F085908	MNVPLTIVTGGEAAIVENQGDHVVVRASVASPPGSTLSMRHGELPVLVKVRGCKRLEERDLPFRIEGRLVSFTRVAREALFGQASAD
Ga0247740_1003400	Ga0247740_10034002	F039203	MKTSAFDLSHPIETFSAAREQIRLSLHLLNLDARQKWDELEAKILNLESKIGQEAEALSEATASAAIDLSGSVKDFVDNHVRSIKH
Ga0247740_1003439	Ga0247740_10034393	F049178	MKQLSTNPGFPSRTELLLGRARRAQQRGERRQALVALREATLLAETDAKLWALYGSACAKANRLPEAERAFGQALYLRQRQHDNARANSIRCVIERLGLAA
Ga0247740_1003613	Ga0247740_10036132	F022464	MGMVVKGMVQVEGTTYRIVRVKRGHYKVVRVLDDASVGVFSVGATFEMAPEGIDGDLMREIARVAIQGAKTTWVGRIA
Ga0247740_1003938	Ga0247740_10039383	F045452	VSDTTALDTQRADAARKKLLSDIIQIKKMGNKMIENTETAIHKAPVMLGLGVVALIGVAVLASRRQKPTFPGFRRERSFLAEAARGAALSALGILSGRVTQRLLANALEEKSRAT
Ga0247740_1004952	Ga0247740_10049528	F076755	MQAVVKGMVQVHSVTYRIVRVRPGHYDVVRVLDDARVGMFSLGSHCEAIIEGDAPEVIREVARAALQGGRTTWAPRRLHA
Ga0247740_1006966	Ga0247740_10069661	F021064	KPFDLPKSVIGNNIIINIAASIAITPNNLLGIDLSIA
Ga0247740_1011525	Ga0247740_10115252	F104314	MTEARDFAALDSAAVLHFIVVSGDDAARVVAGELETYLIERAEALTNASESERVESDEIAFEFVRRLEQLGCVVCAGVDQADLRFDDDPGKTRVWNMGCIAVSTASDEAAFATVNND
Ga0247740_1013197	Ga0247740_10131971	F067906	MSRRARLTILELGSSAKAWASCHALGTDDWVVVAQQSDEAAADFTRRVRQRTLRLRREDAEIEAVDVYAGPGCGGGSSAARREVIEELGAQMADGGRLTLWSASSDVEADAELGAILAQFSPLLAERQIAMNHQWCEADERSGVRHAIPTRPLGAQESELDFPELG
Ga0247740_1023773	Ga0247740_10237732	F028899	MFAALKSQMALPTGPLNGLPLTIPEELWSKIEPEQRERCINAQRVLGAFAGDRDLDLDDLAERLDSEPEDVLGGLHVLDAMALVTTEESDDGPRFHLRALPDEHVRFVGPNGRTQWLFVARPLDPPDVESDSLN
Ga0247740_1030513	Ga0247740_10305132	F013427	MAFEGTCDLAVWCKLLRDKGWTGPRIAREIAKSEGYVNNLIRVVERASPTILMRWRLEQSPTVQHVCATDWLVQICLLPHDAQDAELAHRISTHEPPSPPM
Ga0247740_1039513	Ga0247740_10395131	F003908	MATKVMTRGSIFVAALVSVVACSGNGKRGPMSRQEMIAADPLPLARGAKWTYEVTVKKFDADADKETTKTLSWTTEVIDAKEANGVTAYRIKGWPTDLASFESSDVAPVASEMTVLRHGNSFLFGTSAEPVLDGAEGWFSWPVIDGQKICPSAEMVYCWRVKAVETGYALSFYTGPDEQTFELE
Ga0247740_1044121	Ga0247740_10441211	F031059	MDTSPSPVATRTACVLTGATLEEVTAIGVSERIALRPNKLGVLVTGRPGDLVIDYAAELDGPVYDVMFNAQNGWFSVTIYRGLSSTTRWDNRPGTNPGYPRVDDVLGATTPMAILAVLDIPPDAVGYTPPRALAP
Ga0247740_1054900	Ga0247740_10549001	F097562	VNRDAKTLGNPSAALIALARSRRVQRALAHAYLHRNAPMPTLRSSLGFMTSTACVTDDASTLTHRMSLLGVNRNEGVAYVIEDLGATELPIVYRLWLRGPRQGYLVPIHAWYEAG
Ga0247740_1055713	Ga0247740_10557133	F031944	VKMRTLRRLRTLAPRQIRRRDFDLSDATMEADPNPAPEAVFDRTTGPFDHRRAGGLPNGFDEET
Ga0247740_1064380	Ga0247740_10643802	F080470	MANDKLTKGGAASTALERPMIARDLDKAGKGQLVYVGRDGEVKDPKGVRNRQVAAYVAFGGITVAGVALAATAFPLLIPFYLALGGRFIGTVRAVQKVNEASVALSNGDSLEGRALAEPVAKAWWAPGRVRALAELRVAIADALEGKGEAALERVRKARSRLSPRLIQHQFSYY
Ga0247740_1066246	Ga0247740_10662463	F021141	MSNVLVNFRLNPDRPVRLKWNATDGVPGDGYKAQITAVTLNDTRIEMDSSAILEQSAPDPAGGIGAYLVTFNGMVGFGDDHPDRKLVEGLEDAEIQYELAFVHTDSERIAVEDEDYKILERPSAMAHKISGRAKTSPVT
Ga0247740_1083398	Ga0247740_10833982	F075793	MRCARHWRLTMSKLAVLVVMLAACGGRQKQALAEQQDFDCKERIVSYIATNALGGSELGVQMDCQDAGPRIKRWRVDRQGNRLEDARGLTPSEFDEVWRQIDGSGWAYLKDCGNGTNGEKDPIYVFDVKDDQQKATFQCQSQSMPYPYNTIVDPLDVAAQSGRGQLGDPEPDDLKKYDKKDKQK
Ga0247740_1095376	Ga0247740_10953762	F042447	RDDAKKEAERRGSLSGGQQLMELDGVDEDVLGVLATANIHSPEDLIKTPIEAIATTTGIDMGDLARLRQRAISWLSEVSS
Ga0247740_1097927	Ga0247740_10979272	F018938	LPCAFVQAADLLEQPDAVAVLQVEQPVQVPVQVVRQEGDLLPQLVVGVVP
Ga0247740_1110425	Ga0247740_11104251	F085908	MNVPLSIAAGGEAAIVENQGDHVVVRSSVASPPGSTLSLKHGELPVLVKVRGCKRLPESQLPFRIEGRLVSFTRAAREALFGQTAAD
Ga0247740_1113443	Ga0247740_11134431	F076250	VPDVDQYDIIAVIVGVMFTLRKLDTQSRTAAQYPHVDPEDFRRWQRRSAAAYAPGAYASFFRVIFHFGFIRYGATHALPPLTFARVALLVDALWLACTLYTLVNAHFAREMRKKLGITLDKPQPTR
Ga0247740_1129068	Ga0247740_11290682	F018530	MSNINRDTLQGLPGVTPTFQAFVASVRGYMRDFPELNRLVAGTESTDRQIAWSVLDAMSDFNGTPHFTSMSLEDVLQKNQHALITRMTVISLIEQVGLLQTRNHINYSTGGINVGVNDKPPILMQWLQYFKASTEQRKQQVKVAINIEGILGPSNSGVFSEYWVVNTSYMML
Ga0247740_1168357	Ga0247740_11683572	F014032	MAVLRRAQPRNISIQKIATELRLRTPYRGIETGKDTLRIRVSVPMLAEDVAVTIDVDDLAIEVTWKDDGFVLGAGAIDALFVVETQPRKGFLTWFGVFARQKGRPDRVVLETPDCKVARFVERQIEDWLGLADEPIRGELRID
Ga0247740_1178058	Ga0247740_11780582	F093921	GGFRLETPATRSDFDAVITLGGQSREVHGSGIIGVAEHSDFFLGGTVGNSIHFAYDLSVGMGPGLFIGDNLQIGTTIGIGVSGITGGVLDFAWKIPTEAFVALTLSPEIRPMAYVRQTYLFSSDARQNGSKSARWGDESEVGAGVRLGGRFDSFLYGSVKEMASERYWGVGVGAIL
Ga0247740_1198969	Ga0247740_11989692	F064330	VEAPGIEPDLWQIESTMEHGLGTISTDEDPANVSDRASKCAIVRGVVTESSEAYELSNVVETALAKALVLAAEAKRWDEVLQIANELEGRRLAMPQAQRRANLA
Ga0247740_1200694	Ga0247740_12006941	F092127	RARGGVVLGDDAPPPPPFKDQIVVPGNAISRASDYIALLRDLAAIDPREALKQFGLDETSYLEVAKAWTAAMEADPAIAQTIAAGLAKR
Ga0247740_1210134	Ga0247740_12101341	F067906	PRRARLTVLELGSSATAWASCHGLGADDWVVVAQQSDEAAPDFTRRVRHRAQRLRKEDALIDSVDVYAGPGGGPLVSAARREVIEDLGVQLAQGGRLTLWSGPADTQSNEELAAILAQFGPVLAERQIAVNHQAYREEARSGVRHAAPTRLGGSESEYEYEYDDFG
Ga0247740_1251205	Ga0247740_12512052	F036939	VAKAKTQEDPLVAQAFDADKHADLAKAIEQLSPDEALFFVTKLEAALKKRRLQLLGYLVAMLVWLVGTVFALVYYGSNSGFTGWVFLLPFALVGVILFAFGKAADRVGRRALEASQPAPPKG
Ga0247740_1293062	Ga0247740_12930621	F056729	PCVLLAPAGQRALLDHDLPSHALRDEMTKVRAERGPDGRLKAWVSVAWDRIRLRKCADIVQDHFGGEARDRVGGADLVFWDFMVGNVLVTVHLEQGVGIAILANDSSQASEVVVLEIATHLVEHAQLSLVSA
Ga0247740_1306772	Ga0247740_13067722	F084632	VIEQEDIEQRLARLSNASETLRPSAGFSSRVMLAIEREGAPSFLEATWFSARRLLPVAAIAAAMAVVWAVQVDGTVDDELATSYAAMELE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300023092: Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L148-409B-2

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences