Metagenome / Metatranscriptome Family F080961

Basic Information
Family ID	F080961
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	56 residues
Representative Sequence	MKKKPTQMIGQIITYSPLAGIIGASFLNLSAFQHQLLMLFLLVWANAFFLYKSWTTQ
Number of Associated Samples	83
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.93 %
% of genes near scaffold ends (potentially truncated)	24.56 %
% of genes from short scaffolds (< 2000 bps)	84.21 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Most Common Taxonomy
Group	Bacteria (55.263 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (14.912 % of family members)
Environment Ontology (ENVO)	Unclassified (25.439 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (24.561 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.12% β-sheet: 0.00% Coil/Unstructured: 45.88%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF00072	Response_reg	30.70
PF00486	Trans_reg_C	16.67
PF02669	KdpC	8.77
PF13493	DUF4118	4.39
PF00702	Hydrolase	1.75
PF03814	KdpA	0.88
PF13520	AA_permease_2	0.88
PF00440	TetR_N	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG2156	K+-transporting ATPase, KdpC subunit	Inorganic ion transport and metabolism [P]	8.77
COG2060	K+-transporting ATPase, KdpA subunit	Inorganic ion transport and metabolism [P]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.02 %
Unclassified	root	N/A	42.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.26 %
Unclassified	root	N/A	42.98 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	15.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.63 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	15.79 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.39 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	3.51 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	4.39 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	2.63 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	4.39 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2.63 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	4.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %
Anaerolinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea	0.88 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.98 %
Chloroflexi bacterium HGW-Chloroflexi-6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	4.39 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.75 %
Anaerolinea thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	0.88 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.88 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101203247	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300001213\|JGIcombinedJ13530_103426938	Not Available	770	Open in IMG/M
3300001213\|JGIcombinedJ13530_103718211	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300001213\|JGIcombinedJ13530_104882522	Not Available	668	Open in IMG/M
3300001213\|JGIcombinedJ13530_107161769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	1672	Open in IMG/M
3300001213\|JGIcombinedJ13530_108404559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	639	Open in IMG/M
3300001213\|JGIcombinedJ13530_108432747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	1137	Open in IMG/M
3300002027\|MIS_10133069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → Anaerolinea → Anaerolinea thermophila	1789	Open in IMG/M
3300002027\|MIS_10150152	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300003432\|JGI20214J51088_10160134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1590	Open in IMG/M
3300003432\|JGI20214J51088_10753518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	628	Open in IMG/M
3300003541\|JGI20214J51650_10068664	All Organisms → cellular organisms → Bacteria	2378	Open in IMG/M
3300004022\|Ga0055432_10106212	Not Available	743	Open in IMG/M
3300004157\|Ga0062590_101092687	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300004282\|Ga0066599_100167280	Not Available	1154	Open in IMG/M
3300004282\|Ga0066599_100436997	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300004282\|Ga0066599_101080639	Not Available	590	Open in IMG/M
3300005204\|Ga0068997_10066401	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005289\|Ga0065704_10132075	Not Available	1561	Open in IMG/M
3300005290\|Ga0065712_10472990	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300005293\|Ga0065715_10213971	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300005441\|Ga0070700_101188881	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005827\|Ga0074478_1585590	Not Available	617	Open in IMG/M
3300005831\|Ga0074471_10337457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	775	Open in IMG/M
3300005842\|Ga0068858_100215137	All Organisms → cellular organisms → Bacteria → Proteobacteria	1819	Open in IMG/M
3300006904\|Ga0075424_100824300	Not Available	990	Open in IMG/M
3300006930\|Ga0079303_10481673	Not Available	534	Open in IMG/M
3300006954\|Ga0079219_10255541	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300007076\|Ga0075435_100515600	Not Available	1034	Open in IMG/M
3300009009\|Ga0105105_10497696	Not Available	696	Open in IMG/M
3300009009\|Ga0105105_10921574	Not Available	537	Open in IMG/M
3300009037\|Ga0105093_10142187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1196	Open in IMG/M
3300009082\|Ga0105099_10689388	Not Available	633	Open in IMG/M
3300009131\|Ga0115027_11268455	Not Available	593	Open in IMG/M
3300009146\|Ga0105091_10012505	All Organisms → cellular organisms → Bacteria	3596	Open in IMG/M
3300009146\|Ga0105091_10439587	Not Available	655	Open in IMG/M
3300009148\|Ga0105243_12259682	Not Available	581	Open in IMG/M
3300009156\|Ga0111538_10015718	All Organisms → cellular organisms → Bacteria	9959	Open in IMG/M
3300009157\|Ga0105092_10561990	Not Available	657	Open in IMG/M
3300009162\|Ga0075423_10144218	All Organisms → cellular organisms → Bacteria	2500	Open in IMG/M
3300009168\|Ga0105104_10022353	All Organisms → cellular organisms → Bacteria	3672	Open in IMG/M
3300009174\|Ga0105241_10691699	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300009179\|Ga0115028_10846646	Not Available	717	Open in IMG/M
3300009179\|Ga0115028_11215072	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300010038\|Ga0126315_10534690	Not Available	751	Open in IMG/M
3300010397\|Ga0134124_11069623	All Organisms → cellular organisms → Archaea	822	Open in IMG/M
3300010401\|Ga0134121_11166214	Not Available	768	Open in IMG/M
3300011431\|Ga0137438_1014200	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300012201\|Ga0137365_10539711	All Organisms → cellular organisms → Archaea	856	Open in IMG/M
3300012204\|Ga0137374_10012069	All Organisms → cellular organisms → Bacteria	10089	Open in IMG/M
3300012355\|Ga0137369_10228612	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300012360\|Ga0137375_10020996	All Organisms → cellular organisms → Bacteria	7575	Open in IMG/M
3300012913\|Ga0157298_10217319	Not Available	625	Open in IMG/M
3300012957\|Ga0164303_10009996	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300012961\|Ga0164302_10595740	Not Available	800	Open in IMG/M
3300012986\|Ga0164304_10027698	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10067066	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10432992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	736	Open in IMG/M
3300013306\|Ga0163162_11552118	Not Available	755	Open in IMG/M
3300013315\|Ga0173609_10404104	Not Available	526	Open in IMG/M
3300015371\|Ga0132258_10280027	All Organisms → cellular organisms → Bacteria	4092	Open in IMG/M
3300015371\|Ga0132258_12465228	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300020068\|Ga0184649_1004715	Not Available	779	Open in IMG/M
3300021090\|Ga0210377_10453443	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300022899\|Ga0247795_1054632	Not Available	674	Open in IMG/M
(restricted) 3300024054\|Ga0233425_10013490	All Organisms → cellular organisms → Bacteria	8944	Open in IMG/M
3300025535\|Ga0207423_1048958	Not Available	743	Open in IMG/M
3300025936\|Ga0207670_10045675	All Organisms → cellular organisms → Bacteria	2905	Open in IMG/M
3300025979\|Ga0210078_1038354	Not Available	650	Open in IMG/M
3300026035\|Ga0207703_10256560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1579	Open in IMG/M
3300026075\|Ga0207708_11880892	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300026095\|Ga0207676_11314241	Not Available	718	Open in IMG/M
3300027675\|Ga0209077_1103222	Not Available	791	Open in IMG/M
3300027726\|Ga0209285_10123616	Not Available	796	Open in IMG/M
3300027831\|Ga0209797_10084749	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300027841\|Ga0209262_10648844	Not Available	511	Open in IMG/M
3300027887\|Ga0208980_10045143	All Organisms → cellular organisms → Bacteria	2565	Open in IMG/M
3300027887\|Ga0208980_10099825	Not Available	1702	Open in IMG/M
3300027887\|Ga0208980_10161268	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300027887\|Ga0208980_10432880	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300027887\|Ga0208980_10797833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300028646\|Ga0302159_10086691	Not Available	699	Open in IMG/M
3300029984\|Ga0311332_10015820	All Organisms → cellular organisms → Bacteria	4989	Open in IMG/M
3300029984\|Ga0311332_10297435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	1236	Open in IMG/M
3300030000\|Ga0311337_10870166	Not Available	783	Open in IMG/M
3300030000\|Ga0311337_11409399	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300030005\|Ga0302174_10079545	Not Available	871	Open in IMG/M
3300031244\|Ga0302297_1073417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-6	632	Open in IMG/M
3300031716\|Ga0310813_11771267	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300031949\|Ga0214473_10133469	Not Available	2893	Open in IMG/M
3300031949\|Ga0214473_11490811	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300032173\|Ga0315268_12295214	Not Available	553	Open in IMG/M
3300033233\|Ga0334722_10786257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	674	Open in IMG/M
3300033418\|Ga0316625_100261770	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300033418\|Ga0316625_102773453	Not Available	501	Open in IMG/M
3300033480\|Ga0316620_11593884	Not Available	646	Open in IMG/M
3300033482\|Ga0316627_100898550	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300033482\|Ga0316627_101228738	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300033482\|Ga0316627_101749180	Not Available	638	Open in IMG/M
3300033483\|Ga0316629_11033422	Not Available	648	Open in IMG/M
3300033488\|Ga0316621_10160844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1357	Open in IMG/M
3300033498\|Ga0316610_1068303	Not Available	823	Open in IMG/M
3300033513\|Ga0316628_100139580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	2814	Open in IMG/M
3300033513\|Ga0316628_102857360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	634	Open in IMG/M
3300033521\|Ga0316616_101327141	Not Available	923	Open in IMG/M
3300033521\|Ga0316616_102277618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	723	Open in IMG/M
3300033521\|Ga0316616_102311548	Not Available	718	Open in IMG/M
3300033521\|Ga0316616_102497386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	693	Open in IMG/M
3300033521\|Ga0316616_103384471	Not Available	601	Open in IMG/M
3300033521\|Ga0316616_103987163	Not Available	556	Open in IMG/M
3300033557\|Ga0316617_100177648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1660	Open in IMG/M
3300034158\|Ga0370507_0174928	Not Available	691	Open in IMG/M
3300034158\|Ga0370507_0245936	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300034169\|Ga0370480_0215899	Not Available	649	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.96%
Host-Associated	Host-Associated	13.16%
Engineered	Engineered	0.88%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	43.86%
Terrestrial	Environmental → Terrestrial	42.11%
Plants	Host-Associated → Plants	13.16%
Wastewater	Engineered → Wastewater	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	35.09%
Freshwater	Environmental → Aquatic → Freshwater	24.56%
Marine	Environmental → Aquatic → Marine	16.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.89%
Peat	Environmental → Terrestrial → Peat	6.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.26%
Sediment	Environmental → Aquatic → Sediment	2.63%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.88%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.88%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.54%
Wetlands	Environmental → Aquatic → Marine → Wetlands	16.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	14.91%
Sediment	Environmental → Aquatic → Freshwater → Sediment	13.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.14%
Lake	Environmental → Aquatic → Freshwater → Lake	5.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.39%
Pond	Environmental → Aquatic → Freshwater → Pond	3.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.51%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.63%
Loam	Environmental → Terrestrial → Soil → Loam	2.63%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.88%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.88%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.54%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	13.16%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	13.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.53%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.39%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	3.51%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.51%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.75%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.88%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	14.91%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	13.16%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	8.77%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	6.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.39%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	3.51%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.51%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.63%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.63%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.63%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.75%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.75%
Sinkhole Freshwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Sinkhole Freshwater	1.75%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.75%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.75%
Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Sediment → Microbial Mat	0.88%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.88%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.88%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.88%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002027	Sinkhole freshwater microbial communities from Lake Huron, USA - Flux 1.5k-5k	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013123 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11m	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021090	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redo	Environmental	Open in IMG/M
3300022899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S016-104C-6	Environmental	Open in IMG/M
3300024054 (restricted)	Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_140_MG	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025979	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300028646	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_2	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030005	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_2	Environmental	Open in IMG/M
3300031244	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_2	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033498	Microbial mat bacterial communities from Middle Island sinkhole, Lake Huron, Michigan, United States - MIS.2017.111B	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034158	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1012032471	3300001213	Wetland	MKKQRGWFIGQLLMYLPLAGILYASFLNLSAFQHQVLMLLVIVWVNLFFLYKAWLARFLPVLTVS*
JGIcombinedJ13530_1034269382	3300001213	Wetland	MKKKILGQVFTYLPLIGIIYASFLSLSPIQHQILMLLLLVWVNSLFLYKAWMA*
JGIcombinedJ13530_1037182111	3300001213	Wetland	MDKHKMKKKVLGQIITYSPLAGIVGASFLNLSAVQHQLLILFLLIWANTFFLYRSWLAQ*
JGIcombinedJ13530_1048825222	3300001213	Wetland	MSMKKKPGQIIGQIVTFSPLAGIIYASFLSLSNFQHQILMLLLIVWVNAFFLYKSWTA*
JGIcombinedJ13530_1071617692	3300001213	Wetland	MQKKPSHIFGQIITYSPLVGIAYASFLNLSPVQHQILMLLLLVWVNSLFLYKAWMS*
JGIcombinedJ13530_1084045591	3300001213	Wetland	MKKKPIRWIEQIITYSPLAGIIGASLLNLSAFQHQLLMLFLLVWANAFFLYKSWTTQ*
JGIcombinedJ13530_1084327472	3300001213	Wetland	MKKKLKRMIGRAFIYLPLAGIIYASFLNLSTFQHQVLMLLLLVWVNSLFLYKAWMS*
MIS_101330692	3300002027	Sinkhole Freshwater	MKNKTTHWIRQIITYSPLAGIIGASLLNLSAFQHQLLMLLLLIWANAFFLYKSWMTQ*
MIS_101501522	3300002027	Sinkhole Freshwater	MKKKYTQVIEQIITYSPLAGIVGASLLNLTKFQNQLLMLFLLIWASAFFLYKSWAT*
JGI20214J51088_101601342	3300003432	Wetland	MQKKPPRLLRQIFTYSPLIGIICASFLNLSPVQHQILMLLLLVWVNSLFLYKAWMA*
JGI20214J51088_107535182	3300003432	Wetland	MKTNTRRTIQHIYTFSPLAGILIASLLNLNAFQHQVLMLLLLVWLNTFFVYKAFWGQ*
JGI20214J51650_100686642	3300003541	Wetland	MKKSKQMIWRVFTYLPLAGIIYASFLNLNTFQHQVLMLLLLVWVNSLFLYKAWVS*
Ga0055432_101062122	3300004022	Natural And Restored Wetlands	MKKKSKRMIGRAFIYLPLAGIIYASFLNLSTFQHQVLMLLLLVWVNSLFLYKAWMS*
Ga0062590_1010926872	3300004157	Soil	MSMKKKPSQIIGQIVTFSPLAGIIYASFLSLSNFQHQILMLLLIVWVNAFFLYKSWTA*
Ga0066599_1001672802	3300004282	Freshwater	MKKKAVRLIGQIIIYSPLAGIIISSSFLKLSSFQHQLLMLFLLIWANAFFLYKSWTS*
Ga0066599_1004369971	3300004282	Freshwater	MKKKYTRVIGQIITFSPLAGIIGASLLNLSKFQNQLLMLILLVWASAFFLYKSWLT*
Ga0066599_1010806391	3300004282	Freshwater	MKKKYTRVIDQIITYSPLAGIIGASFLHLTKFQNQLLMLFLLLWASAFFLYKSWAT*
Ga0068997_100664012	3300005204	Natural And Restored Wetlands	MKNKPIRTLEHIVTFSPLVGIIYLSFLNLSNFQHQVLMLLLIVWVNAFF
Ga0065704_101320751	3300005289	Switchgrass Rhizosphere	MKKKTTQILGQIATYSPLAGIIYASFLNLSTLQHQVLMLLLLVWVNSLFLYKAWLA*
Ga0065712_104729901	3300005290	Miscanthus Rhizosphere	MSMKKKTIRILSYIVTYSPLAGILYASFLNLSTVQHQVLMLLLLVWANSLFLYKSWMA*
Ga0065715_102139712	3300005293	Miscanthus Rhizosphere	MKKKTIRILSYIVTYSPLAGILYASFLNLSTVQHQVLMLLLLVWANSLFLYKSWMA*
Ga0070700_1011888812	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MKKKPSQIIGQIVTFSPLAGIIYASFLSLSNFQHQILMLLLIVWVNAFFLYKSWTA*
Ga0074478_15855901	3300005827	Sediment (Intertidal)	MKKIIGQIITYSPLAGIIGASFMKLSTFQSQLLMLFLLVWANTVFLY
Ga0074471_103374572	3300005831	Sediment (Intertidal)	MKKKAIPIIGKIITYSPLAGIIISSSFLKLNVFQHQLLMLFLLVWANAFFLYKSWVSQ*
Ga0068858_1002151374	3300005842	Switchgrass Rhizosphere	MIKKVMSMQKKPIRILGQIVTYSPLAAILYASFLNLSAVQHQVLMLLLLVWVNSLFLYKAWIA*
Ga0075424_1008243001	3300006904	Populus Rhizosphere	KKVMSMKKKTIRILSYIVTYSPLAGILYASFLNLSTVQHQVLMLLLLVWANSLFLYKSWMA*
Ga0079303_104816731	3300006930	Deep Subsurface	MKKKVLEQVITYSPLVGIIGASLLNVSAFQRQLLMLFLLIWANAFFLYKSWLSQ*
Ga0079219_102555412	3300006954	Agricultural Soil	MSMKKKPIQILGQIVTYSPLAGILYASFLNLSTFQHQVLMLLLLIWVNSLFLYKSWLA*
Ga0075435_1005156002	3300007076	Populus Rhizosphere	SYIVTYSPLAGILYASFLNLSTVQHQVLMLLLLVWANSLFLYKSWMA*
Ga0105105_104976961	3300009009	Freshwater Sediment	MKKKPIRFIGQIITYAPLAGILIGSAFLKLSAFQHQLLMLFLLIWANAFFLYKSWLNQ*
Ga0105105_109215742	3300009009	Freshwater Sediment	MKKKVLEQVITYTPLVGIIGASFFSVSALQRQLLMLFLLIWANAFFLYKSWLTQ*
Ga0105093_101421872	3300009037	Freshwater Sediment	MKNKPIRFIGQIITYAPLAGILIGSSFLNLNAFQHQLLMLFLLIWANAFFLYKSWLHQ*
Ga0105099_106893881	3300009082	Freshwater Sediment	IITYAPLAGILIGSSFLNLNAFQHQLLMLFLLIWANAFFLYKSWLHQ*
Ga0115027_112684552	3300009131	Wetland	MSITQAVRLSKKEQGMKKKVLEQVITYSPLVGIIGASLLNVSAFQRQLLMLFLLIWANAFFLYKSWLSQ*
Ga0105091_100125051	3300009146	Freshwater Sediment	MKKKPVQFVGQLITYSPLVGIIGVSFLNLSAFQHQLLMLFLLVWANAFFLYKSWVSQ*
Ga0105091_104395872	3300009146	Freshwater Sediment	MKKKPFRFIGQMIIYSPLAGIIVASLMNTTTFQRLLLMLCALVWMNAFFLYKSWLSQ*
Ga0105243_122596821	3300009148	Miscanthus Rhizosphere	QIVTYSPLAAILYASFLNLSAVQHQVLMLLLLVWVNSLFLYKAWIA*
Ga0111538_100157187	3300009156	Populus Rhizosphere	MKKKPIRTLGQIVTFSPLVGIIYLSLLNLSNFQHQVLMLLLIVWVNAFFLYKSWSA*
Ga0105092_105619901	3300009157	Freshwater Sediment	MKKKPVQFIGQLIIYSPLAGIIGASFMNLSAFQHQLLMLFLLIWANAFFLYKSWMSH*
Ga0075423_101442181	3300009162	Populus Rhizosphere	KKVMSMQKKPIRLLRQIVTYSPLAGILYASFLNLSAVQHQVLMLLLLVWVNSLFLYKAWIA*
Ga0105104_100223534	3300009168	Freshwater Sediment	MKKKPIQFVGQLITYSPLVGIIGVSFLNLSAFQHQLLMLFLLVWANAFFLYKSWVSQ*
Ga0105241_106916992	3300009174	Corn Rhizosphere	MQKKPIRILGQIVTYSPLAAILYASFLNLSAVQHQVLMMLLLVWVNSLFLYKAWIA*
Ga0115028_108466462	3300009179	Wetland	MKKKSIHFIGQIIMYSPLAGIIIGTAVLNLNAFQHQLMILFLLIWANAFFLYKSWMS*
Ga0115028_112150721	3300009179	Wetland	MKKKAIRLIGQIITYLPLAGILISSSFLKLNAFQHQLLMLFLLIWANAFFLYKSWLNQ*
Ga0126315_105346902	3300010038	Serpentine Soil	MSMKKKIFRILGQIVTYSPLAGIIYASFLNLSTLQHQLLMLLLLVWANSLFLYKSWAA*
Ga0134124_110696232	3300010397	Terrestrial Soil	MIKKVMSMQKKPIRILRQIVTYSPLAGILYASFLNLSAVQHQVLMLLLLVWVNSLFLY
Ga0134121_111662141	3300010401	Terrestrial Soil	MQKKPIRILGQIVTYSPLAAILYASFLNLSAVQHQVLMLLLLVWVNSLF
Ga0137438_10142003	3300011431	Soil	MSMKKKTFRILGQIATYSPLAGIIYASLLNLSAFQHQVLMLLLLVWVNSFFLYKSWMS*
Ga0137365_105397111	3300012201	Vadose Zone Soil	MKKKSSRLLGQIITYSPLAGILYASFLNLSTFQHQVLMLLLLVWANSFFLYKSWMA*
Ga0137374_100120697	3300012204	Vadose Zone Soil	MSMKKKPIRILGQIVTYSPLVGILYASLLNLSAFQHQVLMLLLLIWVNSFFLYKSWTS*
Ga0137369_102286121	3300012355	Vadose Zone Soil	KKKTIRILGQIVTYSPLVGILYASFLNLSTIQHQILMLLLIIWANSLFLYKSWTA*
Ga0137375_100209968	3300012360	Vadose Zone Soil	MKRKLIRLSKQVIIYSPLAGILGASFLNLTTFQRQLLMLFLLIWSNVFFLYKSWLNS*
Ga0157298_102173192	3300012913	Soil	MKKKPSQIIGQIVTFSPLAGIIYASFLSLSNFQHQILMLLLIVWVNAFFLYKSWSA*
Ga0164303_100099964	3300012957	Soil	MSMKKKPNRILGQIVTYSPLAGILYASFLNLSTVQHQVLMLLLLVWVNSLFLYKSWMA*
Ga0164302_105957402	3300012961	Soil	MSMKKKPNQILGQIVTYSPLAGILYASFLNLSTVQHQVLMLLLLVWVNSLFLYKSWMA*
Ga0164304_100276982	3300012986	Soil	MKKKPYRILGQIVTYSPLAGILYASFLNLSTVQHQVLMLLLLVWVNSLFLYKSWMA*
(restricted) Ga0172368_100670662	3300013123	Freshwater	MKKKKIIHWIKQFITYSPLAGIIGASLLSVTSFQRQLLMLFLLIWVNVFFLYKSWITQ*
(restricted) Ga0172367_104329922	3300013126	Freshwater	MRMKKKKIIHWIKQFITYSPLAGIIGASLLSVTSFQRQLLMLFLLIWVNVFFLYKSWITQ
Ga0163162_115521181	3300013306	Switchgrass Rhizosphere	MQKKPIRILGQIVTYSPLAAILYASFLNLSAVQHQVLMLLLLVWVNSLFLYKAWIA*
Ga0173609_104041042	3300013315	Sediment	YTRVIEQIITYSPLAGIVGASFLNLTKFQNQLLMLILLVWASAFFLYKSWAT*
Ga0132258_102800274	3300015371	Arabidopsis Rhizosphere	MSMKKKPIRILGQVLTYSPLAGIIYASFLNLTAVQHQVLMLLLLIWVNSLFLYKSWMA*
Ga0132258_124652282	3300015371	Arabidopsis Rhizosphere	MSMKKKPSQIIGQIITFSPLAGIIYASFLSLSNFQHQILMLLLIVWVNAFFLYKSWTA*
Ga0184649_10047152	3300020068	Groundwater Sediment	GMKKKPTRWIGQIITYAPLAGIIGASLLNLSAFQHQLLMLFLLVWANAFFLYKSWMTQ
Ga0210377_104534432	3300021090	Groundwater Sediment	MKKKPTRWIGQIITYAPLAGIIGASLLNLSAFQHQLLMLFLLVWANAFFLYKSWMTQ
Ga0247795_10546322	3300022899	Soil	MSMKKKPSQIIGQIVTFSPLAGIIYASFLSLSNFQHQILMLLLIVWVNAFFLYKSWTA
(restricted) Ga0233425_100134902	3300024054	Freshwater	LRKPKTVKKEQGMKKKVLAQIITYTPLVGILGASFFNVSALQRQFLMLFLLIWANAFFLYKSWLTQ
Ga0207423_10489582	3300025535	Natural And Restored Wetlands	MKKKSKRMIGRAFIYLPLAGIIYASFLNLSTFQHQVLMLLLLVWVNSLFLYKAWMS
Ga0207670_100456751	3300025936	Switchgrass Rhizosphere	MIKKVMSMQKKPIRILGQIVTYSPLAAILYASFLNLSAVQHQVLMMLLLVWVNSLFLYKAWIA
Ga0210078_10383542	3300025979	Natural And Restored Wetlands	MKRKPIRLIEQIVTYLPLAGVLGVSMLNLSTFQHQLLMLFLLVWANTFFLYKSWMSQ
Ga0207703_102565603	3300026035	Switchgrass Rhizosphere	TVNDKKVMSMQKKPIRILGQIVTYSPLAAILYASFLNLSAVQHQVLMLLLLVWVNSLFLYKAWIA
Ga0207708_118808921	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSMKKKTIRMIGQIVTYSPLAGILYASFLNISPVQHQLLMLLLLVWANSLFLYKSWMA
Ga0207676_113142411	3300026095	Switchgrass Rhizosphere	MKKKPSQIIGQIVTFSPLAGIIYASFLSLSNFQHQILMLLLIVWVNAFFLYKSWTA
Ga0209077_11032222	3300027675	Freshwater Sediment	MKKKPVQFVGQLITYSPLLGIIGASFLNLSAFQHQLLMLFLLVWANAFFLYKSWVSQ
Ga0209285_101236161	3300027726	Freshwater Sediment	MKNKPIRFIGQIITYAPLAGILIGSSFLNLNAFQHQLLMLFLLIWANAFFLYKSWLHQ
Ga0209797_100847492	3300027831	Wetland Sediment	MKKKPIRLFKQFLTYSPLAGIIGASFMNLSGFQHQLLMLFLLIWANAFFLYKSWVSQ
Ga0209262_106488441	3300027841	Freshwater	MQLNKLVMSKRKQVMKKKYTQVIEQIITYSPLAGIVGASLLNLTKFQNQLLMLFLLIWASAFFLYKSWAT
Ga0208980_100451433	3300027887	Wetland	MKKKNIQFIGQIIVYSPLAGIIIGSSVLNLTAFQHQLMMLFLLVWANAFFLYKSWVI
Ga0208980_100998252	3300027887	Wetland	MKKKILGQIFTYSPLAGIIYASFLNLSTFQHQVLMLLLLVWVNSLFLYKAWTS
Ga0208980_101612682	3300027887	Wetland	MKNKSIHFIGQIIMYSPLAGIIIGTAILNLSSFQHQLMMLFLLIWANAFFLYKSWMS
Ga0208980_104328802	3300027887	Wetland	MKKKSRFIGQVITYLPLAGIVYASFLNLSTFQHQVLILLVIVWVNSLFLYKAWLA
Ga0208980_107978332	3300027887	Wetland	MKKKSIQFIGQIIMYSPLAGIIIGSSVLNLSAFQHQLMMLFLLVWANAFF
Ga0302159_100866911	3300028646	Fen	MKKKPVQWIEQIVIYSPLAAIIGASSFLNLSAFQHQLLMLFLLVWANAFFLYKSWMTQ
Ga0311332_100158203	3300029984	Fen	MKKKSIQLIRQIIIYSPLAGIIIGSSFLNLSAFQHQLMMLFLLVWANAFFLYKSWVS
Ga0311332_102974352	3300029984	Fen	MKKKPIRLIEQIVTYSPLAGILGASLLKLSAFQHQLLMLFLLIWINSFFLYKSWTS
Ga0311337_108701661	3300030000	Fen	KKVTHMKKKPIRLIEQIVTYSPLAGILGASLLKLSAFQHQLLMLFLLIWINSFFLYKSWT
Ga0311337_114093991	3300030000	Fen	MSKKVIRWIEQIITYLPLVGITGTSLLNLSVIQRQLLMLFLLIWLNIFFVYKSWMTQ
Ga0302174_100795451	3300030005	Fen	TNMKKKSIQLIRQIIIYSPLAGIIIGSSFLNLSAFQHQLMMLFLLVWANAFFLYKSWVS
Ga0302297_10734171	3300031244	Fen	MKKKPVQWIEQIVIYSPLAAIIGASSFLNLSAFQHQLLMLFLLVWANAFFL
Ga0310813_117712671	3300031716	Soil	MKKKPIRILGQIVTYSPLAGILYASFLNLSTFQHQVLMLLLLVWVNS
Ga0214473_101334693	3300031949	Soil	MKKKPIQFIGQLIIYSPLAGIIGASFLNLSAFQHQLLMLFLLIWANAFFLYKSWMSQ
Ga0214473_114908111	3300031949	Soil	MKKKPARFIGQIITYSPLAGILGASLLNLTAFQHQLLMLFLIIWLNAFFLYRSWLS
Ga0315268_122952142	3300032173	Sediment	MKKRIFRIIEQVVTYTPLAGIIGASLLNTSSFQRQLLMLFLLVWANAFFLYKSWAN
Ga0334722_107862571	3300033233	Sediment	MKKKTIQVVGQIITYSPLAGIIGASFLNLSAFQHQLLMLFLLVWANAFFLYKSW
Ga0316625_1002617702	3300033418	Soil	MKKKVLEQVITYTPLVGIIGASFFSISALQRQLLMLFLLIWANAFFLYKSWLSQ
Ga0316625_1027734531	3300033418	Soil	MKKKVLEQVITYSPLVGIIGASLLNVSAFQRQLLMLFLLIWANAFFLYKSWLSQ
Ga0316620_115938842	3300033480	Soil	TGKIIEQIITFSPLVGIIGASFLNLTAFQHQLLMLFLLVWANTFFLYKSWAG
Ga0316627_1008985501	3300033482	Soil	MKKKILGQIFTYSPLAGIIFASFLNLSTFQHQVLMLLLLVWVNSLFL
Ga0316627_1012287382	3300033482	Soil	MKKKSIHFIGQIIMYSPLAGIIIGTAVLNLSAFQHQLMMLFLLIWANAFFLYKSWMS
Ga0316627_1017491801	3300033482	Soil	MKKKVLQQVITYTPLVGIIGASLLNVSAFQRQLLMLFLLIWANAFFLYKSWLSQ
Ga0316629_110334222	3300033483	Soil	MKKKVLEQVITYSPLVGIIGASLLNVSAFQRQLLMLFLLIWANAFFLYKSWLTQ
Ga0316621_101608442	3300033488	Soil	MNKKVLEQVITYSPLVGIIGASFFSVSALQRQLLMLFLLIWANAFFLYKSWLTQ
Ga0316610_10683031	3300033498	Microbial Mat	MQLNKLILSKRKQVMKKKYTQVIEQIITYSPLAGIVGASLLNLTKFQNQLLMLFLLIWASAFFLYKSWAT
Ga0316628_1001395802	3300033513	Soil	MTKKLIRVIGQLIIYLPLIGIVIGSSVLKLSAFQHQLLMLFLLIWVNVFFLYKSWLSS
Ga0316628_1028573602	3300033513	Soil	MKKKSIRVAGQIITYLPLAGIVIGGALLNPTTFQRQLLMLFLLIWVNVFFLYRSWLA
Ga0316616_1013271411	3300033521	Soil	MKKKSIHFIRQIIMYSPLAGIIIGTAVLNLSAFQHQLMMLFLLIWANAFFLYKSWMS
Ga0316616_1022776182	3300033521	Soil	MKKKTVRLIGQIITYSPLAGIIVGSSFLKLSAFQHQLLMLFLLIWVNAFFLYKSWSS
Ga0316616_1023115481	3300033521	Soil	MKKKILGQIFIYSPLAGIIYASFLNLSTFQHQVLMLLLLVWVNSLFLYKAWTS
Ga0316616_1024973861	3300033521	Soil	MKKSIRLIGQIITYSPLVGILIGSSFLKLSAFQHQLLMLFLLIWVNAFFL
Ga0316616_1033844711	3300033521	Soil	NKEQGMKKKVLAQVITYTPLVGIIGASFFSVSALQRQLLMLFLLIWANAFFLYKSWLSQ
Ga0316616_1039871631	3300033521	Soil	MKKKVLERVITYSPLVGIIGASLLNVSAFQRQLLMLFLLIWANAFFLYK
Ga0316617_1001776482	3300033557	Soil	MKKKVLEQVITYTPLVGIIGASFFSVSALQRQLLMLFLLIWANAFFLYKSWLSQ
Ga0370507_0174928_12_182	3300034158	Untreated Peat Soil	MKKKYTRVIDQIITYSPLAGIVGASFLNLTKFQNQLLMLFLLVWASAFFLYKSWAT
Ga0370507_0245936_334_504	3300034158	Untreated Peat Soil	MKKKYTRVIDQIITYSPLAGIVGASFLNLTKFQNQLLMLILLVWASAFFLYKSWAT
Ga0370480_0215899_181_354	3300034169	Untreated Peat Soil	MKKKPTQMIGQIITYSPLAGIIGASFLNLSAFQHQLLMLFLLVWANAFFLYKSWTTQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters