Metagenome / Metatranscriptome Family F082826

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F082826
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	56 residues
Representative Sequence	MRKYTIQMNYNASIIVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD
Number of Associated Samples	46
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	8.33 %
% of genes near scaffold ends (potentially truncated)	16.81 %
% of genes from short scaffolds (< 2000 bps)	65.49 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (70.796 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (73.451 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (50.442 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 25.00% Coil/Unstructured: 58.33%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF06067	DUF932	7.08
PF10263	SprT-like	1.77
PF14207	DpnD-PcfM	1.77
PF13651	EcoRI_methylase	1.77
PF13361	UvrD_C	1.77
PF05013	FGase	0.88
PF13306	LRR_5	0.88
PF14191	YodL	0.88
PF01145	Band_7	0.88
PF00959	Phage_lysozyme	0.88
PF07463	NUMOD4	0.88
PF00265	TK	0.88
PF13508	Acetyltransf_7	0.88
PF03235	DUF262	0.88
PF04542	Sigma70_r2	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.88
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.88
COG1435	Thymidine kinase	Nucleotide transport and metabolism [F]	0.88
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.88
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.88
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.88
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.88
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
All Organisms	root	All Organisms	29.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Viruses	superkingdom	All Organisms → Viruses	18.58 %
cellular organisms	root	All Organisms → cellular organisms	10.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.96 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	4.42 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	4.42 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.54 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	2.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	4.42 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.54 %
Methanomada group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group	2.65 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.88 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.88 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.54 %
Methanobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria	2.65 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.88 %
Epsilonproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	0.88 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	4.42 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	3.54 %
Methanobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales	2.65 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.88 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	3.54 %
Methanobacteriaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae	2.65 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.88 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
Methanosphaera	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera	2.65 %
Tannerellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae	0.88 %
Prevotellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	0.88 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.88 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
unclassified Methanosphaera	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera	2.65 %
Synechococcus phage S-CRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CRM01	0.88 %
Parabacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae → Parabacteroides	0.88 %
Prevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.88 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	70.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.16 %
Methanosphaera sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.	2.65 %
Prevotella ruminicola	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → Prevotella ruminicola	0.88 %
Synechococcus phage S-CRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CRM01	0.88 %
Parabacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae → Parabacteroides	0.88 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.88 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.88 %
Campylobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2061766007\|rumenHiSeq_NODE_4372654_len_194843_cov_1_053849	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	194893	Open in IMG/M
3300000064\|RmDRAFT_c016605	All Organisms → Viruses → Predicted Viral	3420	Open in IMG/M
3300002597\|DRAFT_10693478	Not Available	1063	Open in IMG/M
3300003523\|DRAFT_10286710	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.	981	Open in IMG/M
3300006256\|Ga0099352_1001872	All Organisms → cellular organisms → Bacteria	10885	Open in IMG/M
3300007125\|Ga0102700_1017139	Not Available	2211	Open in IMG/M
3300009965\|Ga0133741_101738	Not Available	1237	Open in IMG/M
3300012016\|Ga0120387_1000660	Not Available	28828	Open in IMG/M
3300012973\|Ga0123351_1305474	Not Available	588	Open in IMG/M
3300012979\|Ga0123348_10244022	Not Available	977	Open in IMG/M
3300012979\|Ga0123348_10803006	Not Available	531	Open in IMG/M
3300012983\|Ga0123349_10001185	Not Available	22135	Open in IMG/M
3300012983\|Ga0123349_10031641	All Organisms → Viruses → Predicted Viral	3678	Open in IMG/M
3300012983\|Ga0123349_11323371	Not Available	520	Open in IMG/M
3300012992\|Ga0157150_1003763	Not Available	2020	Open in IMG/M
3300012992\|Ga0157150_1008215	All Organisms → Viruses → Predicted Viral	1502	Open in IMG/M
3300012992\|Ga0157150_1061426	Not Available	696	Open in IMG/M
3300012992\|Ga0157150_1070197	Not Available	660	Open in IMG/M
3300013830\|Ga0120377_1016792	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1561	Open in IMG/M
3300014057\|Ga0120384_1000875	Not Available	33239	Open in IMG/M
3300014083\|Ga0120366_100387	Not Available	1246	Open in IMG/M
3300021254\|Ga0223824_10673506	Not Available	814	Open in IMG/M
3300021255\|Ga0223825_12415179	Not Available	15785	Open in IMG/M
3300021255\|Ga0223825_12941751	Not Available	34247	Open in IMG/M
3300021256\|Ga0223826_10000018	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	295155	Open in IMG/M
3300021399\|Ga0224415_10000019	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	276601	Open in IMG/M
3300021426\|Ga0224482_11177470	Not Available	511	Open in IMG/M
3300024337\|Ga0255060_10546446	Not Available	584	Open in IMG/M
3300024342\|Ga0255061_10145265	Not Available	1202	Open in IMG/M
3300024342\|Ga0255061_10660969	Not Available	549	Open in IMG/M
3300024342\|Ga0255061_10774559	Not Available	504	Open in IMG/M
3300024345\|Ga0255062_10543279	Not Available	566	Open in IMG/M
3300024345\|Ga0255062_10576097	Not Available	548	Open in IMG/M
3300024486\|Ga0255059_10000565	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.	8822	Open in IMG/M
3300024486\|Ga0255059_10144047	All Organisms → Viruses → Predicted Viral	1084	Open in IMG/M
3300024486\|Ga0255059_10419091	Not Available	626	Open in IMG/M
3300024486\|Ga0255059_10475688	Not Available	585	Open in IMG/M
3300028482\|Ga0233372_1012584	Not Available	1588	Open in IMG/M
3300028591\|Ga0247611_10003851	Not Available	21652	Open in IMG/M
3300028591\|Ga0247611_10005633	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Tannerellaceae → Parabacteroides	16432	Open in IMG/M
3300028591\|Ga0247611_10304851	All Organisms → Viruses → Predicted Viral	1712	Open in IMG/M
3300028591\|Ga0247611_10327568	Not Available	1648	Open in IMG/M
3300028591\|Ga0247611_10793463	Not Available	993	Open in IMG/M
3300028591\|Ga0247611_11088753	Not Available	813	Open in IMG/M
3300028797\|Ga0265301_10939336	Not Available	626	Open in IMG/M
3300028805\|Ga0247608_10001819	Not Available	28282	Open in IMG/M
3300028805\|Ga0247608_10650012	Not Available	1021	Open in IMG/M
3300028805\|Ga0247608_11019051	Not Available	765	Open in IMG/M
3300028805\|Ga0247608_11251430	Not Available	665	Open in IMG/M
3300028832\|Ga0265298_10038678	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CRM01	5110	Open in IMG/M
3300028832\|Ga0265298_11291001	Not Available	618	Open in IMG/M
3300028833\|Ga0247610_10001801	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	25833	Open in IMG/M
3300028833\|Ga0247610_10032524	Not Available	5091	Open in IMG/M
3300028833\|Ga0247610_10044477	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanosphaera → unclassified Methanosphaera → Methanosphaera sp.	4325	Open in IMG/M
3300028833\|Ga0247610_10160619	Not Available	2290	Open in IMG/M
3300028833\|Ga0247610_10432624	Not Available	1379	Open in IMG/M
3300028833\|Ga0247610_11479042	Not Available	655	Open in IMG/M
3300028833\|Ga0247610_11666485	Not Available	604	Open in IMG/M
3300028886\|Ga0256407_10000247	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	135815	Open in IMG/M
3300028886\|Ga0256407_10382884	Not Available	1120	Open in IMG/M
3300028887\|Ga0265299_10489415	All Organisms → Viruses → Predicted Viral	1042	Open in IMG/M
3300028887\|Ga0265299_10543725	Not Available	984	Open in IMG/M
3300028888\|Ga0247609_10024591	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → Prevotella ruminicola	5485	Open in IMG/M
3300031760\|Ga0326513_10002296	Not Available	14160	Open in IMG/M
3300031760\|Ga0326513_10014107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales	5764	Open in IMG/M
3300031760\|Ga0326513_10114701	All Organisms → Viruses → Predicted Viral	2232	Open in IMG/M
3300031760\|Ga0326513_10169272	All Organisms → Viruses → Predicted Viral	1869	Open in IMG/M
3300031760\|Ga0326513_10196778	All Organisms → Viruses → Predicted Viral	1742	Open in IMG/M
3300031760\|Ga0326513_10243036	Not Available	1575	Open in IMG/M
3300031760\|Ga0326513_10266093	All Organisms → Viruses → Predicted Viral	1508	Open in IMG/M
3300031760\|Ga0326513_10529625	Not Available	1061	Open in IMG/M
3300031853\|Ga0326514_10021282	All Organisms → Viruses → Predicted Viral	4508	Open in IMG/M
3300031853\|Ga0326514_10036992	All Organisms → Viruses → Predicted Viral	3563	Open in IMG/M
3300031853\|Ga0326514_10069001	All Organisms → Viruses → Predicted Viral	2731	Open in IMG/M
3300031853\|Ga0326514_10230244	All Organisms → Viruses → Predicted Viral	1591	Open in IMG/M
3300031853\|Ga0326514_10313294	Not Available	1371	Open in IMG/M
3300031853\|Ga0326514_10430780	All Organisms → Viruses → Predicted Viral	1166	Open in IMG/M
3300031853\|Ga0326514_10884727	Not Available	780	Open in IMG/M
3300031853\|Ga0326514_11055861	Not Available	700	Open in IMG/M
3300031867\|Ga0326511_10213127	Not Available	1853	Open in IMG/M
3300031867\|Ga0326511_10326584	All Organisms → Viruses → Predicted Viral	1506	Open in IMG/M
3300031867\|Ga0326511_10464395	Not Available	1258	Open in IMG/M
3300031867\|Ga0326511_10613142	Not Available	1083	Open in IMG/M
3300031867\|Ga0326511_10757522	Not Available	961	Open in IMG/M
3300031867\|Ga0326511_11081089	Not Available	777	Open in IMG/M
3300031899\|Ga0326507_1304107	Not Available	569	Open in IMG/M
3300031899\|Ga0326507_1332663	Not Available	541	Open in IMG/M
3300031992\|Ga0310694_10656763	Not Available	1060	Open in IMG/M
3300031998\|Ga0310786_10477495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1412	Open in IMG/M
3300031998\|Ga0310786_12070505	Not Available	577	Open in IMG/M
3300032030\|Ga0310697_10283471	Not Available	1705	Open in IMG/M
3300032036\|Ga0326509_1373295	Not Available	508	Open in IMG/M
3300032037\|Ga0326508_1156532	Not Available	710	Open in IMG/M
3300032037\|Ga0326508_1258169	Not Available	545	Open in IMG/M
3300032038\|Ga0326512_10001605	Not Available	17188	Open in IMG/M
3300032038\|Ga0326512_10002202	All Organisms → cellular organisms → Bacteria	14424	Open in IMG/M
3300032038\|Ga0326512_10028466	Not Available	4160	Open in IMG/M
3300032038\|Ga0326512_10242104	Not Available	1451	Open in IMG/M
3300032038\|Ga0326512_10343775	Not Available	1196	Open in IMG/M
3300032038\|Ga0326512_10546802	Not Available	912	Open in IMG/M
3300032038\|Ga0326512_10611306	Not Available	852	Open in IMG/M
3300032038\|Ga0326512_10718660	Not Available	769	Open in IMG/M
3300032038\|Ga0326512_10926511	Not Available	652	Open in IMG/M
3300032038\|Ga0326512_11159449	Not Available	560	Open in IMG/M
3300032038\|Ga0326512_11335326	Not Available	509	Open in IMG/M
3300033463\|Ga0310690_10052369	Not Available	4716	Open in IMG/M
7000000128\|SRS050244_LANL_scaffold_100742	Not Available	1205	Open in IMG/M
7000000270\|C6970947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1084	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Mammals	Host-Associated → Mammals	95.58%
Human	Host-Associated → Human	4.42%

Habitat	Taxonomy	Distribution
Digestive System	Host-Associated → Mammals → Digestive System	92.04%
Digestive System	Host-Associated → Human → Digestive System	4.42%
Skin	Host-Associated → Mammals → Skin	3.54%

Habitat	Taxonomy	Distribution
Foregut	Host-Associated → Mammals → Digestive System → Foregut	84.96%
Large Intestine	Host-Associated → Mammals → Digestive System → Large Intestine	7.08%
Oral Cavity	Host-Associated → Human → Digestive System → Oral Cavity	4.42%
Unclassified	Host-Associated → Mammals → Skin → Unclassified	3.54%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen	84.96%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal	7.08%
Tongue Dorsum	Host-Associated → Human → Digestive System → Oral Cavity → Tongue Dorsum	3.54%
Unclassified	Host-Associated → Mammals → Skin → Unclassified → Unclassified	3.54%
Saliva	Host-Associated → Human → Digestive System → Oral Cavity → Saliva	0.89%

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	73.45%
Fecal	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Fecal	6.19%
Cattle And Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Cattle And Sheep Rumen	5.31%
Human	Host-Associated → Human → Digestive System → Oral Cavity → Tongue Dorsum → Human	3.54%
Pig Ears Skin	Host-Associated → Mammals → Skin → Unclassified → Unclassified → Pig Ears Skin	3.54%
Sheep Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Sheep Rumen	2.65%
Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen	1.77%
Camel Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen	1.77%
Human Oral Cavity	Host-Associated → Human → Digestive System → Oral Cavity → Saliva → Human Oral Cavity	0.89%
Elk Feces	Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Elk Feces	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2061766007	Bovine rumen microbial communities fromthe University of Illinois at Urbana-Champaign, USA, that are switchgrass associated - Sample 470	Host-Associated	Open in IMG/M
3300000064	Bovine rumen microbial communities (NEW) from Vernon, TX, USA	Host-Associated	Open in IMG/M
3300002597	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1	Host-Associated	Open in IMG/M
3300003523	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1	Host-Associated	Open in IMG/M
3300006256	Human tongue dorsum microbial communities from NIH, USA - visit 2, subject 764325968	Host-Associated	Open in IMG/M
3300007125	Human tongue dorsum microbial communities from NIH, USA - visit 1, subject 675950834	Host-Associated	Open in IMG/M
3300009965	Human saliva viral communities from oral cavities of healthy adults from Alicante,Spain - individual 7	Host-Associated	Open in IMG/M
3300012016	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1397	Host-Associated	Open in IMG/M
3300012973	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung E36 Day 36 Metagenome	Host-Associated	Open in IMG/M
3300012979	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung B1 Day 1 Metagenome	Host-Associated	Open in IMG/M
3300012983	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung C2 Day 2 Metagenome	Host-Associated	Open in IMG/M
3300012992	Pig viral communities from ears skin of healthy adult pig - Individual 0	Host-Associated	Open in IMG/M
3300013830	Sheep rumen microbial communities from Wyoming, USA - O_aries_Con_1239	Host-Associated	Open in IMG/M
3300014057	Sheep rumen microbial communities from Wyoming, USA - O_aries_Forg_1208	Host-Associated	Open in IMG/M
3300014083	Fecal viral communites from wild urban brown rats in Berlin, Germany - Mu/10/1773	Host-Associated	Open in IMG/M
3300021254	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021255	Sheep rumen microbial communities from New Zealand - Tag 1494 SPADES assembly	Host-Associated	Open in IMG/M
3300021256	Sheep rumen microbial communities from New Zealand - Tag 1283 SPADES assembly	Host-Associated	Open in IMG/M
3300021399	Sheep rumen microbial communities from New Zealand - Tag 1265 SPADES assembly	Host-Associated	Open in IMG/M
3300021426	Sheep rumen microbial communities from New Zealand - Tag 1435 SPADES assembly	Host-Associated	Open in IMG/M
3300024337	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024342	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024345	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024486	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300028482	Fecal eukaryotic communites from dung pellets of Tule Elk in California, USA - Elk Dung D8	Host-Associated	Open in IMG/M
3300028591	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028797	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04	Host-Associated	Open in IMG/M
3300028805	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028832	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01	Host-Associated	Open in IMG/M
3300028833	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2	Host-Associated	Open in IMG/M
3300028886	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_04	Host-Associated	Open in IMG/M
3300028887	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02	Host-Associated	Open in IMG/M
3300028888	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300031760	Bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518	Host-Associated	Open in IMG/M
3300031853	Bovine rumen microbial communities from UC Davis, California, United States - 3_2548_0518	Host-Associated	Open in IMG/M
3300031867	Bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518	Host-Associated	Open in IMG/M
3300031899	Metatranscriptome of bovine rumen microbial communities from UC Davis, California, United States - 0_2496_0518 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300031992	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1742 DNA GHGhigh gp2 (v2)	Host-Associated	Open in IMG/M
3300031998	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)	Host-Associated	Open in IMG/M
3300032030	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300032036	Metatranscriptome of bovine rumen microbial communities from UC Davis, California, United States - 2_2465_0518 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032037	Metatranscriptome of bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032038	Bovine rumen microbial communities from UC Davis, California, United States - 1_2617_0518	Host-Associated	Open in IMG/M
3300033463	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2)	Host-Associated	Open in IMG/M
7000000128	Human tongue dorsum microbial communities from NIH, USA - visit 1, subject 675950834	Host-Associated	Open in IMG/M
7000000270	Human tongue dorsum microbial communities from NIH, USA - visit 2, subject 764325968	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
_HiSeq_24711130	2061766007	Bovine Rumen	MVKFRIRCNFNASYEVEVMANDEGEALEKATNMAEDADNREFVIYGQGESQIIAREDIY
RmDRAFT_0166054	3300000064	Bovine Rumen	MANKYTIEFNYNASIVVDVEGEFHDEGEALDKAREIAEDADINEFTIGEERESKILNVR*
DRAFT_106934781	3300002597	Camel Rumen	MARKYTIQLNYNASIIVEVTGNDEGEALENARNYAEDADIREFTIGNERESQILRQG*
DRAFT_102867102	3300003523	Camel Rumen	MNYNASIVVEVIAKDEGEALDKARDKAEDADIRQFTLGSENESKILRTE*
Ga0099352_100187213	3300006256	Human	MSKYTIKFNYKASIVIEVEGDFRHEGDALDKAREIAEDADIEEFNIGEEMESKILNVE*
Ga0102700_10171394	3300007125	Human	MSKYTIKFNYKASITIEVEGDFRHEGDALDKAREIAEDADIEEFNIGEEMESKILNVE*
Ga0133741_1017382	3300009965	Human Oral Cavity	MSKYTIKFNYKASIVIEVEGDFRHEGDALDKAREIAEDADIEEFNIGKEMESKILNVE*
Ga0120387_100066019	3300012016	Sheep Rumen	MNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRAD*
Ga0123351_13054742	3300012973	Fecal	MKYTVELNYNASIVVTVEADNEGEALDKARDIAEESDIEQFTITNERESQILATN*
Ga0123348_102440223	3300012979	Fecal	MKYTVELNYNASIVITVEANDEGEALDKARNIAEESDIEQFTITNERESQILSTN*
Ga0123348_108030061	3300012979	Fecal	MMKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIGNELESQILRQG*
Ga0123349_1000118525	3300012983	Fecal	MARKYTVQLNYNASIIVETTGNDEGEALENARNIAEDADIREFTIGNERESQILRQG*
Ga0123349_100316413	3300012983	Fecal	MGKKYTIQLNYNASIIVDVEVENTPNAEGDALEKARNIAEDADIREFTIGSERESQILRQG*
Ga0123349_113233711	3300012983	Fecal	MERYTIQLNYNAAITVTVVAENEGQALDMARDKAEDADVSQYTIWGERESTIINRERV*
Ga0157150_10037633	3300012992	Pig Ears Skin	MARYKVECNYNASIIANVEANDEGEALDKARDYAEDANIRQFTIGSERESRILRTE*
Ga0157150_10082152	3300012992	Pig Ears Skin	MRYKIQCNYNAFITVDVEANDEGEALDKARNYAEDADIRQFNIGEEKESRILETE*
Ga0157150_10614262	3300012992	Pig Ears Skin	TIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRAD*
Ga0157150_10701971	3300012992	Pig Ears Skin	MKRYTIEFNYNASIVVNVEGDFNDEGEALDKAREIAEDADINEFTIGEEKESKILNLS*
Ga0120377_10167921	3300013830	Sheep Rumen	MANKYTIEFNYNASIVVDVEGEFHDEGEALDKAREIAEDADINEFTIGEERESKILNVR
Ga0120384_100087520	3300014057	Sheep Rumen	MQKYVIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRD*
Ga0120366_1003871	3300014083	Fecal	MSRYTIELNYNASISFEVEADNEGDALDKARDQAEEADIREFAIGHENESRVLRER*
Ga0223824_106735061	3300021254	Cattle And Sheep Rumen	MARKYTIQLNYNASIIVEVTGNDEGEALENARNYAEDADIREFTIGNERESQILRQG
Ga0223825_124151795	3300021255	Cattle And Sheep Rumen	MHKYTIQMNYNASIVVEVTASDEGEALDKARDKAEDADIRQFTLGSENESKILRTE
Ga0223825_1294175129	3300021255	Cattle And Sheep Rumen	MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD
Ga0223826_10000018191	3300021256	Cattle And Sheep Rumen	MQKYVIELNYNASIVIEVEANDEGEALDKARDQAEDADIRQFTLGKENESKILRRD
Ga0224415_10000019268	3300021399	Cattle And Sheep Rumen	MHKYTIQMNYNASIVVEVNASDEGEALDKARDKAEDADIRQFTLGSENESKILRTE
Ga0224482_111774702	3300021426	Cattle And Sheep Rumen	MQKYVIEMNYNASIVIEVEANDEGEALDKARDKAEDADIRQFTLGKENESRILRRD
Ga0255060_105464462	3300024337	Rumen	NMKFTIQMNYNASYIAEVYANDGGEALDKAREMAEDADIRQFTIASENEAKILNRE
Ga0255061_101452653	3300024342	Rumen	MRKYTIQMNYNASIIVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD
Ga0255061_106609692	3300024342	Rumen	MQKYVIEMNYNASIIIEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRD
Ga0255061_107745592	3300024342	Rumen	MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSEN
Ga0255062_104091292	3300024345	Rumen	MRKYTIQLNYNASIIVDVTGNDEGEALDNARNLAEDADIKEFTICGERESQILRQE
Ga0255062_105432792	3300024345	Rumen	MNKYTIQMNYNASIVVEVIAKDEGEALDKARDKAEDADIRQFTLGSENESKILRTE
Ga0255062_105760972	3300024345	Rumen	MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRAD
Ga0255059_1000056518	3300024486	Rumen	MHRYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD
Ga0255059_101440472	3300024486	Rumen	MMKKYTIQLNYNASIIVDVEVENTPNAEGEALEKARNIAEDADIREFTIGGERESQILRQ
Ga0255059_104190912	3300024486	Rumen	MQKYVIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENE
Ga0255059_104756882	3300024486	Rumen	MARKYTIQLNYNASIIVDVTGNDEGEALENARNIAEDADIKEFTIGAERESQILRQS
Ga0233372_10125842	3300028482	Elk Feces	MKYTVELNYNASIVVTVEANDEGEALDKARNIAEESDIEQFTITNERESQILSTN
Ga0247611_1000385126	3300028591	Rumen	MGKYVIELNYNASIIREVEANDEGQALDLARDAAEDADIREFTLGGESESRILRRE
Ga0247611_1000563334	3300028591	Rumen	MHKYTIQMNYNASIIVEVMAEEEGEALNKARDIAEDADIREFTLGGENESRILSTE
Ga0247611_103048514	3300028591	Rumen	RKYTIQLNYNASIIVDVNAEDEGEALDKARDIAEDADIRQFTIGGERESQILRQEG
Ga0247611_103275682	3300028591	Rumen	MKFTIQMNYNASYIAEVYANDEGEALDKAREMAEDADIRQFTIASENEAKILNRE
Ga0247611_107934632	3300028591	Rumen	MQKYVIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESRILRRD
Ga0247611_110887533	3300028591	Rumen	MRKYTIQMNYNASIIVDVLAEDEGEALDKARDKAEDADIRQFVIGSENESKILRQD
Ga0247611_119113683	3300028591	Rumen	HMRKYTIQLNYNASIIVDVTGNDEGEALDNARNLAEDADIKEFTICGERESQILRQE
Ga0265301_109393361	3300028797	Rumen	MHKYTIQMNYNASIIVEVTANDEGEALDKARDKAEDADIRQFSLCNEQESRILRTD
Ga0247608_1000181958	3300028805	Rumen	MQKYVIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRD
Ga0247608_104231893	3300028805	Rumen	MRKYTIRYNYKASIVVDVFANDEGEALEQGRNKAEDADINEYSICGELESQILRQE
Ga0247608_106500121	3300028805	Rumen	MHKYTIQMNYNASIVVEVIASDEGEALDKARDKAEDADIRQFILGSENESKILRTE
Ga0247608_110190511	3300028805	Rumen	MKKYTIQLNYNASIIVDVEVENTPNAEGEALEKARNIAEDADIREFTIGNERESQILRQG
Ga0247608_112514301	3300028805	Rumen	MQKYVIELNYNASIVVEVEANDEGEALDKARDRAEDADIRQFTLGKENESKILRRD
Ga0265298_100386784	3300028832	Rumen	MADRNYTVQLNFNASILVDVTADDNDPMVEGKVLEMARDIAEDADINEFTIGSERESQIIRRE
Ga0265298_112910012	3300028832	Rumen	MGKKYTIQLNYNASIVVDVNVPDEVPGNEAEGKALEMARDIAEDADIREYTISGERESQILRQG
Ga0247610_1000180129	3300028833	Rumen	MQKYVIEMNYNASIVVEVEADDEGEALDKARDKAEDADIRQFTLGKENESKILRRD
Ga0247610_100325242	3300028833	Rumen	MQKYIIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRD
Ga0247610_1004447710	3300028833	Rumen	MHKYTIQMNYNASIIVEVTASDEGEALDKARDKAEDADIRQFTLGSENESKILRTE
Ga0247610_101606194	3300028833	Rumen	IKIDLYIMKYSVQMNFNATIVVDVEVENGPDAEGKALEKAREIAEDADIREFSICGEREAQILRQE
Ga0247610_104326242	3300028833	Rumen	MHRYEIQMNYNATITLEVEAEDEGQALDKARDIAEDADIRQFSLGSEGESKILRQQY
Ga0247610_114790422	3300028833	Rumen	MTYTIQMNYNASIVVNVEVDNTPDAEGKALELAREMAENADIKEFSICGEREAQILNRG
Ga0247610_116664852	3300028833	Rumen	MKRKYVIKLNYNASIVVDVEVEGDTPDAEGKALEMARNIAEDADIREFTIGAERESQILA
Ga0256407_10000247165	3300028886	Rumen	MGRFTIEMNYNASIIVEVNAEDEGKALDEARNIAEDADIREFTITSERESRILKRE
Ga0256407_1000281459	3300028886	Rumen	MRHYTVRCNFTASIDVDVMANDEGEALDKARDIAEDADAKQFTIHGERESQIIASD
Ga0256407_103828841	3300028886	Rumen	MKRNYSVKLNYNASIVVDVEVEAEQDSPDMEGKALEMARNYAEEADASEFTIGGERESQILAG
Ga0265299_104894152	3300028887	Rumen	MRKYTIQMNYYASIVVEVEVEDAPDAEGKALDLARDKAEDADIREFTLGAECEPRILRTD
Ga0265299_105437252	3300028887	Rumen	MPKYTIQMNYNASIVVEVMANDEGEALDKARDKAEDADIRQFTIGSENESKILRTE
Ga0247609_100245916	3300028888	Rumen	MGKFKVQMNYNASIVFEINAVDEGAALDKARDMAEDADIRQFVICNENDAKILYRE
Ga0326513_1000229627	3300031760	Rumen	MMKKYTVQLNYNASIIVDVEVESSPNAEGEAMEKARNIAEDADIREFTIGCERESQILRQ
Ga0326513_100141071	3300031760	Rumen	MKFTIQMNYNASYIAEVYANDEGEALDKAREMAEDADIRQFTIANENEAKILNRE
Ga0326513_101147014	3300031760	Rumen	MARKYTIQLNYNASIIVDVEVDGNSQNAEGEALEKARNYAEDADIREFTIGNERESQILRQG
Ga0326513_101536656	3300031760	Rumen	MRKYTIQLNYNASIIVEAMGNDEGEALDNARNIAEDADIKEFTICGERESQILRQD
Ga0326513_101692721	3300031760	Rumen	KYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIGSELESQVLRQG
Ga0326513_101967781	3300031760	Rumen	MKKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIG
Ga0326513_102430362	3300031760	Rumen	MKYSVQMNFNATIVVDVEVENGPDAEGKALEKAREIAEDADIREFSICGEREAQILRQE
Ga0326513_102660934	3300031760	Rumen	MKKKYTIQMNYNASIVVDVEVEVEHDSPDAEGKALEMARDIAEDADIREFTINGERESQILSVR
Ga0326513_105296252	3300031760	Rumen	MQKYVIEMNYNASIIVEVEANDEGEALDKARDKAEDADIRQFTLGKENESRILRRD
Ga0326514_100212821	3300031853	Rumen	MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSE
Ga0326514_100369921	3300031853	Rumen	MSKKYTIKLNYNASIIVDVEVDETPDAEGKALEKARDIAEDADIREFTIGAERE
Ga0326514_100690013	3300031853	Rumen	MMKKYTIQLNYNASIIVDVEVENTPNAEGDALEKARNIAEDADIREFTIGGERESQILRQ
Ga0326514_102302444	3300031853	Rumen	MMKKYTVQLNYNASIIVDVEVESSPNAEGEALEKARNIAEDADIREFTIGCERESQILRQ
Ga0326514_103132942	3300031853	Rumen	MHKYTIQMNYNASIIVEVMGNDEGEALDKARDMAEDADIRQFTLSGENESKILRTD
Ga0326514_104307804	3300031853	Rumen	MKKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIGSELESQVLRQ
Ga0326514_108847271	3300031853	Rumen	MKKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNVAEDADIREFTIGNELESQILRQ
Ga0326514_110558612	3300031853	Rumen	VIEMNYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESRILRRD
Ga0326511_102131273	3300031867	Rumen	MKKKYTIQMNYNASIVVDVEVEVERDSPDAEGKALEMARDIAEDADIREFTISGERESQILNIR
Ga0326511_103265844	3300031867	Rumen	MARKYTVQLNYNASIIVETTGNDEGEALENARNIAEDADIREFTIGNERESQILRQG
Ga0326511_104643952	3300031867	Rumen	MKRKYAIKLNYNASIVVDVEVEGDTPDAEGKALEMARNIAEDADIREFTIGAERESQILA
Ga0326511_106131421	3300031867	Rumen	NYNASIIVDVEVDGSSPTAEGDALEKARNIAEDADIREFTICGERESQILRTL
Ga0326511_107575222	3300031867	Rumen	MGKFTIQCNYNASIIVDVIAEDEDSAMRKALDIAEDADINEFTICGEREHQVLSRG
Ga0326511_110810892	3300031867	Rumen	KYSIQMNYIASIIVEVTANDEGEALDKARDKAEDADIRQFTLGNEQESRILRTD
Ga0326507_13041072	3300031899	Rumen	MHKYTIQMNYNASIIVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD
Ga0326507_13326632	3300031899	Rumen	MMKKYTVQLNYNASIIVDVEVENSPNAEGEALEKARNIAEDADIREFTIGCERESQILR
Ga0310694_106567633	3300031992	Rumen	MARKYTIQLNYNASIIVEVTGNDEGEALENARNYAEDADIREFTIGNERESQILRQS
Ga0310786_104774952	3300031998	Rumen	MGKKYTIQLNYNASIIVDVEVENTPNAEGDALEKARNIAEDADIREFTIGSERESQILRQ
Ga0310786_120705051	3300031998	Rumen	MHKYTIQMNYNASIVVEVMANDEGEALDKARDKAEDADIRQFTIGSENESKILRTE
Ga0310697_102834713	3300032030	Rumen	MGKFKVQMNYNASIVFEINAVDEGAALDKARDMAEDADIRQFVICNENDAKII
Ga0326509_13732952	3300032036	Rumen	MHKYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENE
Ga0326508_11565321	3300032037	Rumen	MNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILRTD
Ga0326508_12581692	3300032037	Rumen	MMKKYTVQLNYNASIIVDVEVESSPYAECDALEKARNIAEYAYFREFTIGCERESQILRQ
Ga0326512_100016058	3300032038	Rumen	MSKKYTIKLNYNASIIVDVEVDETPDAEGRALEKARDIAEDADIREFTIGAERESEILRQ
Ga0326512_1000220210	3300032038	Rumen	MQYTIELNYVASIRVTVNGDFRDEGEALDKARNMAEDADMNEFTIGNELESRIIEQR
Ga0326512_100284662	3300032038	Rumen	MAKGYTIQLNYNATITVNVEGRFNDEGEALDKAREIAEDADINEFTIGEERESKILNTY
Ga0326512_102421042	3300032038	Rumen	MRKYTIQCNFNASITVEVTANDEGEALEKARNIAEDADIREFTIGAERESQILRQD
Ga0326512_103437753	3300032038	Rumen	MARKYTIQLNYNASIIVDVTGNDEGEALENARNIAEDADIKEFTIGAERERQILRQS
Ga0326512_105468023	3300032038	Rumen	MQKYIIEINYNASIVVEVEANDEGEALDKARDKAEDADIRQFTLGKENESKILRRG
Ga0326512_106113062	3300032038	Rumen	MKKKYTVQLNYKASIIVDVEVENSPNAEGDALEKARNAAEDADIREFTIGNELESQILRQ
Ga0326512_107186601	3300032038	Rumen	MTYTIQMNYNASIVVNVEVDNGPDAEGKALELAREMAENADIKEFSICGEREAQILNRG
Ga0326512_109265111	3300032038	Rumen	MRKYTIQLNYNASIIVDVNAEDEGEALDKARDIAEDADIRQFTIGGERESQILRQE
Ga0326512_111594492	3300032038	Rumen	MHRYTIQMNYNASIVVEVLANDEGEALDKARDKAEDADIRQFTIGSENESKILR
Ga0326512_113353262	3300032038	Rumen	MKRKYTIKLNYNASIVVDVEVEGDTPDAEGKALEMARNIAEDADIREFTIGAERESQILA
Ga0310690_100523693	3300033463	Rumen	MKKYTIQLNYNASIIEEVHADDEGEALDKARDLAEDADIRQFTIGSERESKIFSVC
SRS050244_LANL_scaffold_100742__gene_134780	7000000128	Human	MSKYTIKFNYKASITIEVEGDFRHEGDALDKAREIAEDADIEEFNIGEEMESKILNVE
C6970947__gene_142857	7000000270	Human	MSKYTIKFNYKASIVIEVEGDFRHEGDALDKAREIAEDADIEEFNIGEEMESKILNVE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082826

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences