Metagenome / Metatranscriptome Family F084316

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084316
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	59 residues
Representative Sequence	MTHFKVGDKVIITEGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTHEAHVNKVDD
Number of Associated Samples	102
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.07 %
% of genes near scaffold ends (potentially truncated)	20.54 %
% of genes from short scaffolds (< 2000 bps)	76.79 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.607 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.036 % of family members)
Environment Ontology (ENVO)	Unclassified (29.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (30.357 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.53% β-sheet: 29.41% Coil/Unstructured: 67.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00467	KOW	5.36
PF10604	Polyketide_cyc2	4.46
PF00106	adh_short	2.68
PF02678	Pirin	2.68
PF01113	DapB_N	1.79
PF12706	Lactamase_B_2	1.79
PF02668	TauD	1.79
PF10099	RskA	1.79
PF00999	Na_H_Exchanger	1.79
PF08241	Methyltransf_11	1.79
PF12697	Abhydrolase_6	1.79
PF04545	Sigma70_r4	1.79
PF05532	CsbD	0.89
PF00582	Usp	0.89
PF00912	Transgly	0.89
PF01144	CoA_trans	0.89
PF00196	GerE	0.89
PF02909	TetR_C_1	0.89
PF00581	Rhodanese	0.89
PF01979	Amidohydro_1	0.89
PF02548	Pantoate_transf	0.89
PF14417	MEDS	0.89
PF12695	Abhydrolase_5	0.89
PF04228	Zn_peptidase	0.89
PF01661	Macro	0.89
PF03055	RPE65	0.89
PF00903	Glyoxalase	0.89
PF05721	PhyH	0.89
PF01575	MaoC_dehydratas	0.89
PF03060	NMO	0.89
PF01593	Amino_oxidase	0.89
PF00255	GSHPx	0.89
PF12728	HTH_17	0.89
PF07931	CPT	0.89
PF02129	Peptidase_S15	0.89
PF12146	Hydrolase_4	0.89
PF03235	DUF262	0.89
PF00355	Rieske	0.89
PF07398	MDMPI_C	0.89
PF01551	Peptidase_M23	0.89
PF00296	Bac_luciferase	0.89
PF04909	Amidohydro_2	0.89
PF05048	NosD	0.89
PF13450	NAD_binding_8	0.89
PF01016	Ribosomal_L27	0.89
PF11716	MDMPI_N	0.89
PF01625	PMSR	0.89
PF13531	SBP_bac_11	0.89
PF03006	HlyIII	0.89
PF13193	AMP-binding_C	0.89
PF03109	ABC1	0.89
PF08768	THAP4_heme-bd	0.89
PF01425	Amidase	0.89
PF00717	Peptidase_S24	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	2.68
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	1.79
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	1.79
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.79
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	1.79
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	1.79
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	1.79
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.89
COG0211	Ribosomal protein L27	Translation, ribosomal structure and biogenesis [J]	0.89
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.89
COG0413	Ketopantoate hydroxymethyltransferase	Coenzyme transport and metabolism [H]	0.89
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.89
COG0661	Predicted protein kinase regulating ubiquinone biosynthesis, AarF/ABC1/UbiB family	Signal transduction mechanisms [T]	0.89
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.89
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.89
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.89
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.89
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.89
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.89
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.89
COG2321	Predicted metalloprotease	General function prediction only [R]	0.89
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.89
COG3670	Carotenoid cleavage dioxygenase or a related enzyme	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89
COG3896	Chloramphenicol 3-O-phosphotransferase	Defense mechanisms [V]	0.89
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.89
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.89
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.89
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.07 %
Unclassified	root	N/A	33.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.07 %
Unclassified	root	N/A	33.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.61 %
Unclassified	root	N/A	33.93 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	4.46 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.39 %
Unclassified	root	N/A	33.93 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	4.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.50 %
Unclassified	root	N/A	33.93 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	4.46 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.29 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	6.25 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	4.46 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	4.46 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	3.57 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.57 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.79 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.89 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.89 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.89 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.89 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	4.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.57 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.79 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.89 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.89 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.89 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.89 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	4.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.57 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	2.68 %
Solihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans	0.89 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.89 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.89 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.89 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.89 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	4.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.57 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2.68 %
Solihabitans fulvus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	0.89 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.89 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.89 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.89 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.89 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.93 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	4.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.57 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2.68 %
Solihabitans fulvus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	0.89 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.89 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.89 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.89 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.89 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_352914_len_972_cov_8_690330	Not Available	1022	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig124591	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
2124908041\|P3_CLC_ConsensusfromContig99235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796	Open in IMG/M
2124908043\|A2_c1_ConsensusfromContig26327	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300000956\|JGI10216J12902_118517474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	656	Open in IMG/M
3300001538\|A10PFW1_12018893	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	2942	Open in IMG/M
3300003465\|P52013CM_1095304	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	605	Open in IMG/M
3300003844\|Ga0056914_10000918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22746	Open in IMG/M
3300004463\|Ga0063356_105961639	Not Available	522	Open in IMG/M
3300004479\|Ga0062595_101123713	Not Available	689	Open in IMG/M
3300004480\|Ga0062592_100732524	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300004643\|Ga0062591_101452406	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005329\|Ga0070683_100891399	Not Available	853	Open in IMG/M
3300005436\|Ga0070713_100309596	Not Available	1456	Open in IMG/M
3300005439\|Ga0070711_101191055	Not Available	659	Open in IMG/M
3300005458\|Ga0070681_10919774	Not Available	793	Open in IMG/M
3300005458\|Ga0070681_11408636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	621	Open in IMG/M
3300005459\|Ga0068867_101604651	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005548\|Ga0070665_101196000	Not Available	771	Open in IMG/M
3300005548\|Ga0070665_101700649	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005614\|Ga0068856_102299483	Not Available	547	Open in IMG/M
3300005616\|Ga0068852_102275530	Not Available	563	Open in IMG/M
3300005843\|Ga0068860_101587481	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300006047\|Ga0075024_100148422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1067	Open in IMG/M
3300006047\|Ga0075024_100476140	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300006057\|Ga0075026_100525569	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006354\|Ga0075021_10918439	Not Available	569	Open in IMG/M
3300006638\|Ga0075522_10033440	All Organisms → cellular organisms → Bacteria	3097	Open in IMG/M
3300006876\|Ga0079217_11581254	Not Available	522	Open in IMG/M
3300007521\|Ga0105044_10019421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9107	Open in IMG/M
3300009083\|Ga0105047_10022589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	9558	Open in IMG/M
3300009084\|Ga0105046_11050044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	660	Open in IMG/M
3300009093\|Ga0105240_11824437	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	633	Open in IMG/M
3300009120\|Ga0117941_1204588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300009174\|Ga0105241_10959325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	798	Open in IMG/M
3300009673\|Ga0116185_1041282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2564	Open in IMG/M
3300009777\|Ga0105164_10038234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2616	Open in IMG/M
3300009840\|Ga0126313_11057183	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300010857\|Ga0126354_1103254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	514	Open in IMG/M
3300012011\|Ga0120152_1074512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300012014\|Ga0120159_1163658	Not Available	607	Open in IMG/M
3300012203\|Ga0137399_11749082	Not Available	510	Open in IMG/M
3300012212\|Ga0150985_102801447	Not Available	678	Open in IMG/M
3300012469\|Ga0150984_112921642	Not Available	672	Open in IMG/M
3300012527\|Ga0136633_1365632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	516	Open in IMG/M
3300012668\|Ga0157216_10012955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4488	Open in IMG/M
3300012682\|Ga0136611_10045695	Not Available	3134	Open in IMG/M
3300012929\|Ga0137404_11820261	Not Available	566	Open in IMG/M
3300012930\|Ga0137407_11061462	Not Available	768	Open in IMG/M
3300012960\|Ga0164301_10924293	Not Available	679	Open in IMG/M
3300013104\|Ga0157370_11170995	Not Available	694	Open in IMG/M
3300013758\|Ga0120147_1067573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	614	Open in IMG/M
3300013769\|Ga0119887_1006678	All Organisms → cellular organisms → Bacteria	3730	Open in IMG/M
3300013769\|Ga0119887_1194398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	563	Open in IMG/M
3300013833\|Ga0119880_1077265	Not Available	870	Open in IMG/M
3300014322\|Ga0075355_1041757	Not Available	999	Open in IMG/M
3300014498\|Ga0182019_11277020	Not Available	541	Open in IMG/M
3300014968\|Ga0157379_11968670	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300015163\|Ga0167665_1001232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6673	Open in IMG/M
3300015165\|Ga0167628_1028437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1212	Open in IMG/M
3300015165\|Ga0167628_1031714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300015192\|Ga0167646_1118083	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300015209\|Ga0167629_1022073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	2319	Open in IMG/M
3300015209\|Ga0167629_1041930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	1572	Open in IMG/M
3300015374\|Ga0132255_104062277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300017947\|Ga0187785_10604327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	563	Open in IMG/M
3300018422\|Ga0190265_10657611	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	1168	Open in IMG/M
3300018429\|Ga0190272_11223024	Not Available	740	Open in IMG/M
3300018429\|Ga0190272_12437017	Not Available	568	Open in IMG/M
3300018465\|Ga0190269_10016649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3301	Open in IMG/M
3300018466\|Ga0190268_10985808	Not Available	669	Open in IMG/M
3300019377\|Ga0190264_11210472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300019881\|Ga0193707_1044067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1435	Open in IMG/M
3300020082\|Ga0206353_10051160	Not Available	698	Open in IMG/M
3300020202\|Ga0196964_10196948	Not Available	930	Open in IMG/M
3300020215\|Ga0196963_10006405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5735	Open in IMG/M
3300020215\|Ga0196963_10025704	All Organisms → cellular organisms → Bacteria	2509	Open in IMG/M
3300021061\|Ga0196973_1055509	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300021384\|Ga0213876_10007764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5823	Open in IMG/M
3300022213\|Ga0224500_10031450	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300025581\|Ga0208355_1012216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2799	Open in IMG/M
3300025604\|Ga0207930_1006701	All Organisms → cellular organisms → Bacteria	3558	Open in IMG/M
3300025862\|Ga0209483_1326486	Not Available	569	Open in IMG/M
3300025911\|Ga0207654_10479234	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300025913\|Ga0207695_10952991	Not Available	738	Open in IMG/M
3300025927\|Ga0207687_10058669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2709	Open in IMG/M
3300026516\|Ga0209573_1000052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	327050	Open in IMG/M
3300027823\|Ga0209490_10099910	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300027870\|Ga0209023_10015713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6760	Open in IMG/M
3300027870\|Ga0209023_10538961	Not Available	694	Open in IMG/M
3300027915\|Ga0209069_10338430	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300028800\|Ga0265338_10385240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1002	Open in IMG/M
3300029984\|Ga0311332_11595526	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300030000\|Ga0311337_11965346	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300030294\|Ga0311349_11885867	Not Available	551	Open in IMG/M
3300030943\|Ga0311366_11008187	Not Available	720	Open in IMG/M
3300030991\|Ga0073994_11368655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	618	Open in IMG/M
3300031229\|Ga0299913_10026231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5451	Open in IMG/M
3300031238\|Ga0265332_10174828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	896	Open in IMG/M
3300031251\|Ga0265327_10008655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	7534	Open in IMG/M
3300031251\|Ga0265327_10181057	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300031455\|Ga0307505_10686716	Not Available	501	Open in IMG/M
3300031712\|Ga0265342_10629499	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	540	Open in IMG/M
3300031938\|Ga0308175_102581374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300032420\|Ga0335397_10012122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10568	Open in IMG/M
3300032893\|Ga0335069_10578773	Not Available	1291	Open in IMG/M
3300032955\|Ga0335076_10669295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300033233\|Ga0334722_11217816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300034125\|Ga0370484_0061230	Not Available	946	Open in IMG/M
3300034169\|Ga0370480_0126743	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300034268\|Ga0372943_1131755	Not Available	523	Open in IMG/M
3300034965\|Ga0370497_0033903	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	1088	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.11%
Host-Associated	Host-Associated	20.54%
Engineered	Engineered	5.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.04%
Plants	Host-Associated → Plants	20.54%
Aquatic	Environmental → Aquatic	16.07%
Wastewater	Engineered → Wastewater	5.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.39%
Freshwater	Environmental → Aquatic → Freshwater	9.82%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Sediment	Environmental → Aquatic → Sediment	5.36%
Peat	Environmental → Terrestrial → Peat	3.57%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	2.68%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	1.79%
Marine	Environmental → Aquatic → Marine	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.14%
Ice	Environmental → Aquatic → Freshwater → Ice	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.36%
Loam	Environmental → Terrestrial → Soil → Loam	4.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.46%
Sand	Environmental → Terrestrial → Soil → Sand	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.57%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	2.68%
Lentic	Environmental → Aquatic → Freshwater → Lentic	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Biological Phosphorus Removal	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal	1.79%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.64%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	10.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.36%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	4.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.57%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Bioreactor	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unchlorinated	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated	0.89%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.04%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	6.25%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	4.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	4.46%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.57%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.57%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.68%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.68%
Sewage Treatment Plant	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Sewage Treatment Plant	2.68%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.79%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Wastewater Treatment	Engineered → Wastewater → Nutrient Removal → Biological Phosphorus Removal → Bioreactor → Wastewater Treatment	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Wastewater	Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.89%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300003465	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P5 sample	Environmental	Open in IMG/M
3300003844	Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI, USA - TNR Reactor_6/25/2014_ DNA	Engineered	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009083	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (megahit assembly)	Environmental	Open in IMG/M
3300009084	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (megahit assembly)	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009673	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG	Engineered	Open in IMG/M
3300009777	Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012682	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ223 (23.06)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013758	Permafrost microbial communities from Nunavut, Canada - A24_65cm_12M	Environmental	Open in IMG/M
3300013769	Sewage treatment plant microbial communities from Vermont, USA - Sand_B	Engineered	Open in IMG/M
3300013833	Sewage treatment plant microbial communities from Vermont, USA - CLO_W	Engineered	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015163	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1b, glacier snout)	Environmental	Open in IMG/M
3300015165	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3A, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015192	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-2a, rock/snow interface)	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021061	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5-13C	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300022213	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_4_1	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026516	Wastewater treatment Type I Accumulibacter community from EBPR Bioreactor in Madison, WI, USA - TNR Reactor_6/25/2014_ DNA (SPAdes)	Engineered	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032420	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-04 (spades assembly)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_01271310	2088090008	Soil	PCENVGMTHFKVGDKVIITEGDFKGERGAIVDKHLVGDGLTVALEKHGKEIKTHEAHVNKLDAD
Perma_A_C_02408630	2124908032	Soil	MAKFEVGDRVIVTHGDFKGERGAIIDKKLLGEGITVALEKNGKEIKTQEDHVSLAD
P3_CLC_00433350	2124908041	Soil	MTHFKVGDKVIITEGDFKGERGAIVDKHLVGDGLTVALEKHGKEIKTHEAHVNKLDAD
A2_c1_00337390	2124908043	Soil	MTHFKVGDKVIITEGDFKGERGAITDKHLVGDGLTVALEKHGKEIKTHEAHVNKVDDD
JGI10216J12902_1185174742	3300000956	Soil	MARFKVGDKVIITEGDFKGERGAIVDKRLIGDGLTVALEKDGREIKTEEGHVNLADG*
A10PFW1_120188933	3300001538	Permafrost	MTHFKVGDKVIITEGDFKGERGAIIDKKLIGDGLTVALEKHGKEIKTHEAHVNKVDD*
P52013CM_10953042	3300003465	Ore Pile And Mine Drainage Contaminated Soil	GHLWKDGAMARFKVGDKVIITEGDFKGERGAIVDKRLLGEGLTVALEKNGKEIKTEEGHVNLADGD*
Ga0056914_100009183	3300003844	Wastewater Treatment	VGKFEVGDRVIVNEGDFKGDRGTITDKDLIGDEIKVALEEDGREIDTHEAHVSLLERED*
Ga0063356_1059616392	3300004463	Arabidopsis Thaliana Rhizosphere	MISVMAKFEVGDKIIVTVGDFKGERGTITDKKLLGDGITVALAKNGKEIKTQEDHVALAD
Ga0062595_1011237131	3300004479	Soil	LVRHRSRLAHRAEESWVVHGHLCEDPEMTHFKVGDKVIITEGDFKGERGAIIDKHLIGDGLTVALEKHGKEIKTHEAHVNKIDAD*
Ga0062592_1007325241	3300004480	Soil	MARFKVGDKVIITEGDFKGDRGAITDKDVIGDEIKVALEKNGKEIKTHEAHVNKIDD*
Ga0062591_1014524061	3300004643	Soil	SSDVPTSDMARFKVGDKVIITEGDFKGDRGAITDKDVIGDEIKVALEKNGKEIKTHEAHVNKIDD*
Ga0070683_1008913992	3300005329	Corn Rhizosphere	ARMAKLEVGDKVVVTHGDFKGERGAIVDKKLLGDGLTVALEKDGTEIKTHEEHVNLVD*
Ga0070713_1003095962	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKNLIGDGLTVALEKHGKEIKTHEAHVNRVDSD*
Ga0070711_1011910552	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAKLEVGDKVVVTHGDFKGERGAIVDKKLLGDGLTVALEKNGTEIKTHEEHVNLVD*
Ga0070681_109197742	3300005458	Corn Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKHVIGDGLTVALEKHGKEIKTHEAHVNKVDSD*
Ga0070681_114086361	3300005458	Corn Rhizosphere	MAKLEVGDKIVVTHGDFKGERGAIVDKKLLGDGITVALEKNGKEIKTHEEHVNLVD*
Ga0068867_1016046512	3300005459	Miscanthus Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKDIIGDEIKVALEKHGKVIKTHEAHVNKVND*
Ga0070665_1011960001	3300005548	Switchgrass Rhizosphere	ARAEDARMAKLEVGDKVVVTHGDFKGERGAIVDKKLLGDGLTVALEKNGTEIKTHEEHVNLVD*
Ga0070665_1017006492	3300005548	Switchgrass Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKNLIGDGLTVALEKRGKEIKTHEAHVNKVDDD*
Ga0068856_1022994832	3300005614	Corn Rhizosphere	KVARAEDARMAKLEVGDKVVVTHGDFKGERGAIVDKKLLGDGLTVALEKNGTEIKTHEEHVNLVD*
Ga0068852_1022755302	3300005616	Corn Rhizosphere	MTHFKVGDRVIITEGDFKGEFGAITDKHLIGDGLTVALEKHGKEIKTHEAHVNKVDD*
Ga0068860_1015874812	3300005843	Switchgrass Rhizosphere	VSRFKVGDKVIITEGDFKGERGAITDKNLIGDGLTVALEKHGKEIKTHEAHVNKVDD*
Ga0075024_1001484221	3300006047	Watersheds	MTHFKVGDKVIVTEGHFKGERGAIIDKHLIGDGITVALEKHGKEIKTHEAHVNKVDAD*
Ga0075024_1004761402	3300006047	Watersheds	VTHFKVGDKVIITEGDFKGERGAITDKDLIGDGLKVALEKHGKVIKTEEGHVNKIDD*
Ga0075026_1005255692	3300006057	Watersheds	MTHFKVGDKVIITQGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTQEDHVNKLDD*
Ga0075021_109184392	3300006354	Watersheds	HFKVGDKVIITEGDFKGERGAIIDKHLIGDGLTVALEKHGKEIKTHEAHVNKLDDE*
Ga0075522_100334402	3300006638	Arctic Peat Soil	MTHFKVGDKVIITEGDFKGDIGAITDKHLIGDGLTVALEKHGKEITTHEAHVNKLDD*
Ga0079217_115812542	3300006876	Agricultural Soil	MARFKVGDKVIITEGDFKGERGAIVDKKLLGDGLVVALEKNGKEIKTEEGHVNLADSD*
Ga0105044_100194213	3300007521	Freshwater	MARFEVGDKVIITEGDFKGDRGAITDKTLIGDGITVALENGGKEIKTHEAHVNLVEDD*
Ga0105047_100225893	3300009083	Freshwater	MGKFEVGDRIIITQGDFKGEQGAITDKNLIGDGITVALFDGGREIKTEEGHVNLVDLD*
Ga0105046_110500442	3300009084	Freshwater	MAKFEVGDQVIITEGDFKGDRGAITDKTLIGDGITVALENGGKEIKTHEAHVNLVEDD*
Ga0105240_118244372	3300009093	Corn Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTHEAHVNKVDD*
Ga0117941_12045882	3300009120	Lake Sediment	MARFKVGDKVIITEGDFKGERGAIVDKKLLGDGLVVALEKNGKEIKTHEAHVNLADGD*
Ga0105241_109593252	3300009174	Corn Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKHVIGDGLTVALEKHGKEIKTHEAHVNKVDD*
Ga0116185_10412822	3300009673	Anaerobic Digestor Sludge	MVRRFPTVPRRSRIMAKFEVGDRVIITEGDFKGDRGTITDKNLIGDGIKVALEEDGKEIKTEEGHVSLLERED*
Ga0105164_100382342	3300009777	Wastewater	MKRFKVGDKVIITQGDFKGERGAIVDKKLLGDGLVVALEKNGKEIKTEEGHVNLADGD*
Ga0126313_110571831	3300009840	Serpentine Soil	MAKFHVGDRVIIAEGDFKGEKGTITDKDLIGDEIKVALEDDGREIDTFETHVNLLARD*
Ga0126354_11032542	3300010857	Boreal Forest Soil	DGSCEDRGMTHFKVGDKVIITEGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTHEAHVNKVDD*
Ga0120152_10745121	3300012011	Permafrost	MTHFKVGDKVIITEGDFKGERGAIIDKKLIGDGLTVALEKHGKEIKTHEAHVNKVDDD*
Ga0120159_11636582	3300012014	Permafrost	MTHFKVGDKVIITEGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTHEAHVNKVDAD*
Ga0137399_117490822	3300012203	Vadose Zone Soil	MTHFKVGDKVIITEGDFKGERGAIMDKHLIGDGLTVALEKHGKEIKTHEAHVNKVDAD*
Ga0150985_1028014473	3300012212	Avena Fatua Rhizosphere	MARFKVGDKVIITEGDFKGDRGAITDKDLIGDEITVALEKNGREIKTHEAHVNKLDR*
Ga0150984_1129216421	3300012469	Avena Fatua Rhizosphere	RACQYPRMVHFNVGDKVIITEGDFKGDRGAITDKDLIGDGLTVALEKRGKEIKTHEAHVNKVDD*
Ga0136633_13656321	3300012527	Polar Desert Sand	MAKLKVGDRVIITEGDFKGERGAITDKKLIGDGLVVALEDGGREIKTEEAHVNLVEDS*
Ga0157216_100129552	3300012668	Glacier Forefield Soil	LLWQDEAMARFKVGDKVIITEGDFKGERGAIVDKKLLGDGLVVALEKNGKEIKTEEGHVNLADAD*
Ga0136611_100456952	3300012682	Polar Desert Sand	MAKLKVGDRVIITEGDFKGERGAITDKKLIGDGLVVALEDGGREIKTQEAHVNLVEDS*
Ga0137404_118202612	3300012929	Vadose Zone Soil	MTHFKVGDKVIITEGDFKGERGAITDKHVIGDGLTVALEKHGKEIKTHEAHVNKVDDD*
Ga0137407_110614622	3300012930	Vadose Zone Soil	VSHFKVGDKVIITEGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTHEAHVNKVDDD*
Ga0164301_109242932	3300012960	Soil	MTHFKVGDKVIITEGDFKGERGAITDKHLVGDGLTVALEKHGKEIKTHEAHVNKVDDD*
Ga0157370_111709952	3300013104	Corn Rhizosphere	MTHFKVGDKVIITEGDFKGERGAIIDKHVIGDGLTVALEKHGKEIKTHEAHVNKVDSD*
Ga0120147_10675731	3300013758	Permafrost	MTHFKVGDKVIITEGDFKGERGAITDKNLIGDGLTVALERKGKEIKTHEAHVNKLDD*
Ga0119887_10066782	3300013769	Sewage Treatment Plant	MAKFEVGDRVIITEGDFKGERGAIVDKKLIGDGLVVALEDSGREIKTEEGHVNLLERD*
Ga0119887_11943981	3300013769	Sewage Treatment Plant	MAKFEVGDRVIITEGDFKGDRGVISDKNLIGDGVKVALEENGREIKTEEGHISLLQSDD*
Ga0119880_10772652	3300013833	Sewage Treatment Plant	MEQCGMAKFEVGDRVIITEGDFKGERGAIVDKKLIGDGLVVALEDSGREIKTEEGHVNLLERD*
Ga0075355_10417572	3300014322	Natural And Restored Wetlands	MTHFKVGDKVIITQGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTQEDHVNKLEDD*
Ga0182019_112770201	3300014498	Fen	DPAMTHYKVGDKVIITEGDFKGERGAIIDKHLIGDGLTVALEKHGKEIKTHEAHVNKLDD
Ga0157379_119686702	3300014968	Switchgrass Rhizosphere	RARIPTMTHFKVGDKVIITEGDFKGERGAITDKNLIGDGLTVALEKRGKEIKTHEAHVNKVDDD*
Ga0167665_10012322	3300015163	Glacier Forefield Soil	MARFKVGDKVIITEGDFKGERGAIVDKKLLGDGLVVALEKNGKEIKTEEGHVNLADD*
Ga0167628_10284373	3300015165	Glacier Forefield Soil	MTHFKVGDKVIITEGDFKGERGAITDKKLVGDGLVVALEKRGKEIKTHEAHVNKVDD*
Ga0167628_10317141	3300015165	Glacier Forefield Soil	MARFKVGDKVIITHGDFKGERGAITDKKLLGEGLTVALSKNGKEIKTQEDHVSLADD
Ga0167646_11180831	3300015192	Glacier Forefield Soil	MTHFKVGDKVIITEGDFKGERGAITDKHVIGDGLTVALEKHGKEIKTHEAHVNKADD*
Ga0167629_10220733	3300015209	Glacier Forefield Soil	MARFKVGDKVIITHGDFKGERGAITDKKLLGEGLTVALSKNGKEIKTQEDHVSLADDND*
Ga0167629_10419302	3300015209	Glacier Forefield Soil	MTHFKVGDKVIITEGDFKGERGAIIDKKVIGDGLVVALEKHGKEIHTHEAHVNKVDD*
Ga0132255_1040622772	3300015374	Arabidopsis Rhizosphere	MARFKVGDKVIITEGDYKGDRGAITDKDVIGDEIKVALEKNGKEIKTHEAHVNKIDD*
Ga0187785_106043272	3300017947	Tropical Peatland	MTHFKVGDKVIITEGDFKGERGAIVDKHLIGDGLTVALEKHGREIKTHEAHVNKIDD
Ga0190265_106576113	3300018422	Soil	MTRFKVGDKVIITEGDFKGDRGAITDKHLVGDGLTVALEKNGKEIKTHEDHVNKVEDD
Ga0190272_112230241	3300018429	Soil	PSGSSDSRRADQREDASMARFKVGDKVIITEGDYKGERGAITDKDAIGDEIKVALEDGGREIDTHEAHVNLVDD
Ga0190272_124370172	3300018429	Soil	VIITEGDFKGERGAILSKELLGDEIVVALEDGGREIDTHEAHVNLVDRD
Ga0190269_100166492	3300018465	Soil	MARFKVGDKVVITEGDFKGERGAVVDKKLLGDGLVVALEKNGKEIKTEEGHVNLADG
Ga0190268_109858082	3300018466	Soil	MARFKVGDKIIITEGDFKGERGAIVDKRLIGKGLTVALEKNGKEIKTEEDHVELAD
Ga0190264_112104722	3300019377	Soil	MARFKVGDKVIITEGDFKGERGAIVDKKLLGDGLVVALEKNGKEIK
Ga0193707_10440672	3300019881	Soil	MTHFKVGDKVIITEGDFKGDRGAITDKDLIGDEIKVALEKNGKEIKTHEAHVNKVDD
Ga0206353_100511601	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MAKLEVGDKVVVTHGDFKGERGAIVDKKLLGDGLTVALEKNGTEIKTHEEHVNLVD
Ga0196964_101969481	3300020202	Soil	MAKFEVGDKVIVTHGDFKGERGTITDKKLLGDGITVALAKNGKEIKTQEDHVALAD
Ga0196963_100064052	3300020215	Soil	MSKFEKGTKIIITQGDFKGERGTIVDKKLLTDGITVALAKNGKEIKTEEAHVELADF
Ga0196963_100257042	3300020215	Soil	MAKLEVGDKVIVTHGDFKGERGTITDKKLLGDGITVALAKDGKEIKTQEDHVALAD
Ga0196973_10555091	3300021061	Soil	MAKLEVGDKVIVTHGDFKGERGTITDKKLLGDGITVALAKNGKEIKTQEDHVALAD
Ga0213876_100077644	3300021384	Plant Roots	MTHFKVGDKVIITEGDFKGERGAITDKKLIGDGLTVALEKHGREIKTHEAHVNKVDD
Ga0224500_100314502	3300022213	Sediment	MAKLEVGDKVIITEGDFKGERGAITHKTLIGDGITVALEKKGKEIKTHEAHVNLVHDD
Ga0208355_10122162	3300025581	Arctic Peat Soil	MTHFKVGDKVIITEGDFKGERGAITDKHLVGDGLTVALEKHGKEIKTHEAHVNKLDD
Ga0207930_10067013	3300025604	Arctic Peat Soil	MTHFKVGDKVIITEGDFKGERGAIVDKHLVGDGLTVALEKHGKEIKTHEAHVNKLDD
Ga0209483_13264861	3300025862	Arctic Peat Soil	MTHFKVGDKVIITEGDFKGDIGAITDKHLIGDGLTVALEKHGKEITTHEAHVNKLDD
Ga0207654_104792342	3300025911	Corn Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKHVIGDGLTVALEKHGKEIKTHEAHVNKVDD
Ga0207695_109529912	3300025913	Corn Rhizosphere	MTHFKVGDKVIITEGDFKGEFGAITDKHLIGDGLTVALEKHGKEIKTHEAHV
Ga0207687_100586692	3300025927	Miscanthus Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKDIIGDEIKVALEKHGKVIKTHEAHVNKVND
Ga0209573_1000052227	3300026516	Wastewater Treatment	VGKFEVGDRVIVNEGDFKGDRGTITDKDLIGDEIKVALEEDGREIDTHEAHVSLLERED
Ga0209490_100999103	3300027823	Freshwater	MARFEVGDKVIITEGDFKGDRGAITDKTLIGDGITVALENGGKEIKTHEAHVNLVEDD
Ga0209023_100157134	3300027870	Freshwater And Sediment	MSKFEVGDRVIVTQGDFKGERGAITDKRLIGDGITVALEDGGREIKTEEAHVNLLESD
Ga0209023_105389612	3300027870	Freshwater And Sediment	MSKFEVGDRVIITHGDFKGERGAITDKTLIGDGIRVALEDGGREIKTEEDHVN
Ga0209069_103384302	3300027915	Watersheds	VTHFKVGDKVIITEGDFKGERGAITDKDLIGDGLKVALEKHGKVIKTEEGHVNKIDD
Ga0265338_103852402	3300028800	Rhizosphere	MTHYKVGDKVIITEGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTHEAHVNKIDD
Ga0311332_115955262	3300029984	Fen	MTHFKVGDKVIITEGDFKGERGAITDKDLIGDGLKVALEKHGKVIKTEEGHVNKIDD
Ga0311337_119653462	3300030000	Fen	MAHFKVGDKVIITEGDFKGERGAITDKDLIGDGLKVALEKHGKVIKTEEGHVNKIDD
Ga0311349_118858672	3300030294	Fen	MTHFKVGDKVIITQGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTQEDHV
Ga0311366_110081872	3300030943	Fen	TWEDRTMTHFKVGDKVIITQGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTQEDHVNKLDD
Ga0073994_113686552	3300030991	Soil	MAHFKVGDKVIITEGDFKGERGAITDKHIIGDGLTVALEKHGKEIKT
Ga0299913_100262316	3300031229	Soil	MARLKKGDKVIITEGDFKGERGAITDKDLIGDGITVALEKNGREIKTEEGHVNRVD
Ga0265332_101748283	3300031238	Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKHLVGDGLTVALEKHGKEIKTHEAHVNKIDD
Ga0265327_100086556	3300031251	Rhizosphere	MTHFKVGDKVIITEGDFKGERGAIIDKHLIGDGLTVALEKHGREIKTHEAHVNKVDD
Ga0265327_101810571	3300031251	Rhizosphere	SWSVHPRFACQDFAMTHFKVGDKVIITEGDFKGERGAITDKHLIGDGLTVALEKHGKEIKTHEAHVNKLDD
Ga0307505_106867162	3300031455	Soil	MAKFHVGDRVIIAEGDFKGEKGTITDKDLIGDEIKVALEDDGREVDTFEAHVNLVERD
Ga0265342_106294991	3300031712	Rhizosphere	MTHFKVGDKVIITEGDFKGERGAITDKHVIGDSLTVALEKHGKEIKTHEAHVNKIDD
Ga0308175_1025813742	3300031938	Soil	MTHFKVGDKVIITEGVFKGERGAITDKHLVGDGLTVALEKHGREIKTHEAHVNKVDD
Ga0335397_1001212212	3300032420	Freshwater	MGKFEVGDRIIITQGDFKGEQGAITDKNLIGDGITVALFDGGREIKTEEGHVNLVDLD
Ga0335069_105787732	3300032893	Soil	DVPPAPREHRRMTHFKVGDKVIITQGDFKGERGAIVDKHLVGDGLTVALEKHGKEIKTHEAHVNKIHDD
Ga0335076_106692952	3300032955	Soil	VVFAGLRLGNPLAWEDHVMTHFKVGDKVIITEGDFKGERGAITDKHLIGDGLTVALEKHGREIKTHEAHVNKIDD
Ga0334722_112178162	3300033233	Sediment	MTHFKVGDKVIITEGDFKGERGAIIDKNLVGDGLTVALEKHGKEIKTHEAHVNKLDSD
Ga0370484_0061230_307_534	3300034125	Untreated Peat Soil	MKTLRSLRGARCSREDSAMTHFKVGDKVIITEGDFKGERGAIVDKHLVGDGLTVALEKHGKEIKTHEAHVNKLDD
Ga0370480_0126743_674_850	3300034169	Untreated Peat Soil	MAKLEVGDKVIITEGDFKGERGAITDKKLIGDGITVALEKGGKEIKTHEAHVNLVGDD
Ga0372943_1131755_248_424	3300034268	Soil	MTHFKVGDKVIITEGDFKGERGAIIDKHLIGDGLTVALEKHGKEIKTHEAHVNKVDAD
Ga0370497_0033903_441_617	3300034965	Untreated Peat Soil	MARFKVGDKVIITQGDFKGERGAITDKHLVGDGLTVALEKNGKEIKTEEDHVNKVDDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084316

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences