NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F085070

Metagenome / Metatranscriptome Family F085070

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Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F085070
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 53 residues
Representative Sequence VTDGSCGSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVTAEAAGCVDC
Number of Associated Samples 82
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 2.70 %
% of genes from short scaffolds (< 2000 bps) 2.70 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(64.865 % of family members)
Environment Ontology (ENVO) Unclassified
(83.784 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(67.568 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 8.33%    β-sheet: 0.00%    Coil/Unstructured: 91.67%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300015273|Ga0182102_1003739Not Available955Open in IMG/M
3300015324|Ga0182134_1053265Not Available740Open in IMG/M
3300015335|Ga0182116_1070622Not Available743Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere64.86%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated9.91%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere7.21%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.60%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009975Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_187 metaGHost-AssociatedOpen in IMG/M
3300009976Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaGHost-AssociatedOpen in IMG/M
3300009984Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaGHost-AssociatedOpen in IMG/M
3300009989Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_197 metaGHost-AssociatedOpen in IMG/M
3300009990Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaGHost-AssociatedOpen in IMG/M
3300009992Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015273Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015278Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015284Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015290Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015309Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015319Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015320Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015324Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015325Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015328Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015334Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015335Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015350Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017408Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017412Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017421Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017422Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017440Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017445Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017447Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300020023Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_22AUG2016_LD2 MGHost-AssociatedOpen in IMG/M
3300028055Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028142Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028143Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028152Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028251Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028253Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028470Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028526Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300032464Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032465Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032466Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032469Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032502Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032551Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032591Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032697Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032758Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032761Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032790Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032812Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032890Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033535Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033537Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062589_10198431413300004156SoilVTDGSCWSGSELTGGVTVVEALVLALPGRGSVEVVTGSAEEVSISE
Ga0070666_1097107713300005335Switchgrass RhizosphereVTDGSCWSELPAGSELTGGVAVVEALVLALPGRGSVEVVTGSAEDVSTSEVV
Ga0070671_10152075323300005355Switchgrass RhizosphereVTDGSCWSELPAGSELTGGVAVVEALVLALPGRGSVEVVTGS
Ga0070671_10175870713300005355Switchgrass RhizosphereWSELPAGSEVTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSDVVSAEAAGCVDC*
Ga0070703_1005350713300005406Corn, Switchgrass And Miscanthus RhizosphereVTDGSCWSGSELTGGVTVVEALVLALPGRGSVEVVTGSAEEVSISEEVT
Ga0070686_10188065823300005544Switchgrass RhizosphereVTDGSCWSELPAGSEVTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSDVVSAEAAGCVDC*
Ga0070702_10116433613300005615Corn, Switchgrass And Miscanthus RhizosphereVTDGSCWSGSELTGGVTVVEALVLALPGRGSVEVVTGSAEEVSISEEVTAEAAGC
Ga0068861_10245361913300005719Switchgrass RhizosphereSELPAGSELTGGVAVVEALVLALPGRGSVEVVTGSAEDVSTSEVVRAEAAGCVDC*
Ga0068858_10142552323300005842Switchgrass RhizosphereVTDESCGSELTGGVAVVEALVLALPGRGSVEVVTGSAEE
Ga0068860_10255996213300005843Switchgrass RhizosphereVTDGSCGSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVTAEAAGCVDC
Ga0105251_1015893013300009011Switchgrass RhizosphereVTDGSCWSELPAGSEVTGGVAVVEALVLALPGRGSIDVVTGSAEEVSISEVVSAEAAGCVDC*
Ga0105129_11407713300009975Switchgrass AssociatedSELPARSELTRGVVVVEALVLALPGRGSIEVVTGSAEDVSTSEVSAEAAGCVDC*
Ga0105129_11876823300009975Switchgrass AssociatedMDGSCWSELPAGSELTGGVAVIEALVLALPGRGSVEVATGSAEDVSTSEVSAEAAGCVDC
Ga0105128_11231323300009976Switchgrass AssociatedSSSDEEPSVTDGSCWSELTGGVAVVDALVLALPRRGSVEVVTGSAEDVSTSEVVSAEAAGCVDC*
Ga0105128_11547213300009976Switchgrass AssociatedVTDESCWSELTGGVAVVEALVLALPGRGSVVVVTGSAEEVSASEVVSAEAAGCVDCGTIDSSAHSAEEHKV*
Ga0105029_10089613300009984Switchgrass RhizosphereVTDGSCRSVLPAGSELTGGVAVVEALVLALPGRGSIDVVTGSA
Ga0105131_13643823300009989Switchgrass AssociatedCWSELTGGVAVVEALVLALPGRGSVEVVSGPAEEVSISEVVTAEAAGCVD*
Ga0105132_12355813300009990Switchgrass AssociatedVTDGSCWSELPAGSELTGGVAVVEAFMLALPRRGSVEVVTGSAEDVSTSEVVSAE
Ga0105120_104110923300009992Switchgrass AssociatedVTDGSCWSELPARFELTGGVAVVEALVLALPGRGSVEVVTGSAEDVSTSEVVSAEATG
Ga0105120_105227413300009992Switchgrass AssociatedLIGGVAVIEALVLALPRRGFLQVVSGSTEEVSTSEVVTAEPAGCVDC*
Ga0105139_105198013300009995Switchgrass AssociatedVTDGSCWSELTGGVAVVEAHVLALPGRGSVDVVTGSAEEVSTSEVVSADAAGCVDCRTIDSSPPP*
Ga0105139_107690813300009995Switchgrass AssociatedVTNGSCGSELTGGVAVVEALVLALPGRGSVEVVIGSAEEVSAYEVVTAE
Ga0105139_109614113300009995Switchgrass AssociatedCWSELPAGSELTGGVAVVEALVLALPGRGSVEVVTGSAEDVSTSEEVRAEAAGCVDC*
Ga0134122_1197649113300010400Terrestrial SoilVTDESCGSELTGGVAVVEALVLALPGRGSVEVVIGSAEEVSASEDVTAEAAGCVSCGIGTPL
Ga0134121_1203208213300010401Terrestrial SoilMDGSCVSELTGGVAVVEALVLALPGRGSVEVLIGSAEEVSASEDV
Ga0134123_1100733823300010403Terrestrial SoilDGSSWSELTGGVAVVEALVLALPGSGSVDVVTGSAEEVSTSEVVTAEAVGCVNCGTIDSP
Ga0134123_1173402423300010403Terrestrial SoilVTDGSCGSELTGGVAVVEALVLALPGRGSVEVVTG
Ga0163162_1166613413300013306Switchgrass RhizosphereMDGSCWSELTGGVAVVEALVLALPGRGSVDVITGSAEDVSTSEVVSAEAAGCVDC*
Ga0163162_1232251513300013306Switchgrass RhizosphereVTDGSCGSELTGGVAIVEALVLALPRRGSVEVIIRSAEE
Ga0163163_1202407113300014325Switchgrass RhizosphereVTDGSCWSKLPAGSELTRGVAVVEALVLALPGRGSVEV
Ga0157379_1071201013300014968Switchgrass RhizosphereLSSSSSSSDGEPSVTDGSGGSELTGGVAVVEAVVEARVLALPGRGSVEVTVGSAEVVSASEVVTADAAGCMD*
Ga0182183_104642313300015270Switchgrass PhyllosphereVTDGSCWSELTGGVAVVEALVLALPGRGSVEVVTGSAENVSTSEVVRAEAAGCVDCGT
Ga0182102_100373933300015273Switchgrass PhyllosphereVTDGSCRSELTRGVAVVDALVLALPRRGSVEVIIGS
Ga0182102_102268213300015273Switchgrass PhyllosphereVTDGSCGSELTRGVAIIEARVLALPKSGSVEIVAGSVEVSASEVTAEAAGCV
Ga0182099_102492413300015278Switchgrass PhyllosphereVTDGSCGSELTGGVAVVEALVLALPRRGSVDVVTGSAEEVSTSEVVSAEAAGCVDC*
Ga0182101_109678213300015284Switchgrass PhyllosphereMDGSCWSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSKVVTAEVAS
Ga0182105_109531823300015290Switchgrass PhyllosphereSLDSVPSVTDRSCWSELPAGSEVTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSEVVSAEAAGCVDC*
Ga0182180_105630313300015306Switchgrass PhyllosphereVTDGSCWSEPTRGVAIVEALVLALPGRGSVEVVTRSTEEVS
Ga0182180_106164813300015306Switchgrass PhyllosphereVTDGSCGSELTGGVAVVEALVLALPGRGSVEVVIGSAEEV
Ga0182098_107554413300015309Switchgrass PhyllosphereVTDGSYGSELTGGVAVMEARVLALPGRGSVEVVTGSAEEVSISEVVTAEPA
Ga0182182_106977423300015311Switchgrass PhyllospherePAGSELTGGVAVVEALVLALPGRGSVEVVTGSAEDVSTSEVSAEAAGCVDC*
Ga0182121_107962213300015316Switchgrass PhyllosphereTDGSCWSELPAGSEVTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSDVVSAEAAGCVDC*
Ga0182136_108084113300015317Switchgrass PhyllosphereMARKRSRSSSLDGEPSVIDGSCGSKLTRGIAVVEALVLALPRRGSVEVLAGSAEEVSTSE
Ga0182136_113734223300015317Switchgrass PhyllosphereVTDGSYWSELTGGVVVIEALVLALLGRGSVEVVTVSAEDVSTSEVSAEAAGCVDC*
Ga0182130_108705013300015319Switchgrass PhyllosphereMDGSCRSELTGGVAVVEALVLAMPGRGSVEVVSGSAEDVSTSEVSAKAAGCVDC*
Ga0182165_108831913300015320Switchgrass PhyllosphereVTDGSCGSELTGGVAVVDALVLALPRRGSIEVVIGSAEEVSASED
Ga0182165_112856223300015320Switchgrass PhyllosphereVTDGSCWSELPAGSELTGGVAVVEALVLALPGRGSVEVVTGSAEDVSISEVSVEAAGCVGC*
Ga0182134_105326523300015324Switchgrass PhyllosphereVTDGSCGSELTGGVAVVEALVLARPGRGSVEVVIGSA
Ga0182134_111373513300015324Switchgrass PhyllosphereVTDGSCGSELTGGVAVVEALVLALLVRGSVEVLSKS
Ga0182134_114453013300015324Switchgrass PhyllosphereVTDGSGGSELTGGVAIVEARVLALPGRGSVEVVAGSVEVVSTSKVVTADAVVYVD*
Ga0182148_107742923300015325Switchgrass PhyllosphereMDGSCGSKLTGGVAVMEALVLALPGRGSVEVVSGSAEEV
Ga0182148_111822713300015325Switchgrass PhyllosphereVTDGSCWSELTGGVAVVEALVLALPRRGSVEVVTGSAEEVSTSEVVSAEAAGCVDCGTI
Ga0182114_111343513300015327Switchgrass PhyllosphereVTDGSCWSELPAGSEVTGGVAVVEALVLALPRRGSVDVVTGSAEEVSTSEVVSAEAAGCVDC*
Ga0182114_115943523300015327Switchgrass PhyllosphereMDGSCGSELTRGVAIVEALMLALPRRGSVEVVIGSAEEVSASEDVTAVTP*
Ga0182153_107359613300015328Switchgrass PhyllosphereVTDRSCRSELTRGIAVVEALVLALPGRGSVEVVTGSAEEVSTSEFVTVEAAGCVDYGSI
Ga0182153_110497923300015328Switchgrass PhyllosphereTDGSCWSELTGSVAVVEALVLALPGRGSVDVVTGSAEEVSTSEVVSAEAAGCVDC*
Ga0182117_109154013300015332Switchgrass PhyllosphereVTDGSCWSEQTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSEEVSAEAAGCVDC*
Ga0182132_102504213300015334Switchgrass PhyllosphereVTDGSYWSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVSAKAAGCVNC*
Ga0182116_106677413300015335Switchgrass PhyllosphereVTDGSCWSELTRGVAVVDALVLALPRRGSVEVVTGSAEDVLTSEVVSAEAAGCV
Ga0182116_107062223300015335Switchgrass PhyllosphereMEGSCGSELTGGVAVVETLVLALPGRGFVEVVIGSAEGVSASEDV
Ga0182116_110648513300015335Switchgrass PhyllosphereLDGEPLVTDGSYRSELTGGVAVVEALVLALPGRGSVEVVIGSAEEVSASE
Ga0182150_110417913300015336Switchgrass PhyllosphereVTDGSCWSELTRGVAVVEALVLALPGRVSVDVVTGSAEEVSTSEVVSTDAAGCVDCGT
Ga0182137_105522313300015338Switchgrass PhyllosphereLDGEPSVTYGSCGSELTGGVAVVEALVLAQPGRGSVEVVIGSAEEVSPSEVVTAVAAGYV
Ga0182133_113406113300015340Switchgrass PhyllosphereDGSCWSELPAGSELTGGVAVVEALVLALPGRGSIEVVTGSAEDVSTSEVVSAEAAGCVDC
Ga0182133_113575913300015340Switchgrass PhyllosphereMTDGSCWSELPTGSELTRGVAVVETLVLALPGRGSVEVVTGLAEDVSTSEVVSAEA
Ga0182115_130709623300015348Switchgrass PhyllosphereVTDGSCWSELPARSELTGGVAIVEALVLALPVRGSVEVVIGSAE
Ga0182163_113285623300015350Switchgrass PhyllosphereLDEEPSVTDGSCGSEPTGGVAVVEALVLALPRRGSVEVVIGPAEEVS
Ga0182163_122507813300015350Switchgrass PhyllosphereVTDGSCGSELTGGVAIVEALVLALPGRGSVDVVTGSVEEVSTSEVVS
Ga0182169_125523323300015352Switchgrass PhyllosphereVTDGSCWSELPAGSELTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSE
Ga0182179_110058413300015353Switchgrass PhyllosphereVTDGSCWSGSELIGGVAVVEARVLTLPGRGSVEVVTGSAEEVSISEEVTAEAAGCVDC
Ga0182179_128693713300015353Switchgrass PhyllosphereVTDGSCWSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTS
Ga0182197_103725013300017408Switchgrass PhyllosphereVMDGSCGSELTGGVAIVEALVLVLPGRGSIEVIIRSAEEVSTSEVVTAEAAGCV
Ga0182199_113334413300017412Switchgrass PhyllosphereVTDGSCGSELTGGVAVVEVVVEALVLALPGRRFVEDVNGSAEEVSASEVVTAEAASCVDCGNRD
Ga0182199_118074913300017412Switchgrass PhyllosphereELPAGSEVTGGVAVVEALVLALPGRGSVDVVTSSAEEVSTSDVVSAEAVGCVDC
Ga0182213_116402313300017421Switchgrass PhyllosphereVMDGSCGSELTRGVAVVEALVLALPGIGSVEVVTGSAEEVSTSEVVT
Ga0182201_103902333300017422Switchgrass PhyllosphereMSRQLELTRGVAVVEALVLALPGRGSVEVVTGSAEEVST
Ga0182201_113452313300017422Switchgrass PhyllosphereSSSDREPSVTDRSCWSEPTGGVAIVEALVLALPGRGSVEVVTGSAEDVSTSEVVSVEAVGYVDC
Ga0182201_114669313300017422Switchgrass PhyllosphereMNGSCGSELTGGVAVVEAFVLALPGRGSVEVVIGSVEEV
Ga0182194_114919313300017435Switchgrass PhyllosphereVTDGSCGSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVTAEAAGCVDCGTIDSSP
Ga0182200_110373223300017439Switchgrass PhyllosphereVTDGSCWSELPAGSEVTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSDVVSAEAAGCVDC
Ga0182214_107925713300017440Switchgrass PhyllosphereVMDGSCGSELTGGVTVVEALVLALPGRGSVEVVIGSAERVSASEDVTAEAAACINCGSRDSSP
Ga0182198_115602413300017445Switchgrass PhyllosphereVTDRSCGSELTGGVAVVEALVLALPGRGSVEVVIGSAEEVSASE
Ga0182198_115936913300017445Switchgrass PhyllosphereMDGSCWSELPAGSELTGGVAVVEALVLALPGRGSVEVVT
Ga0182215_112590023300017447Switchgrass PhyllosphereMDGSCWSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSISEVVTAEPTGCVDC
Ga0182215_117261913300017447Switchgrass PhyllosphereDGVPSVTDGSCWSELPAGSEVTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSDVVSAEAAGCVDC
Ga0182178_101393213300020023Switchgrass PhyllosphereVTDGSCWSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVS
Ga0268338_103793213300028055PhyllosphereSEVTGGVAVVEALVLALPGRGSVDVVTGSAEEVSTSDVVSAEAAGCVDC
Ga0268347_102009013300028142PhyllosphereVTDGSCWSELTGGVAVVEALVLALPGRGSIEVVTGLAEEVSTSEVVSAEAAGCVDC
Ga0268348_100778413300028143PhyllosphereVTDGSCGSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVTAEAAGCVDCGSIDSSVRITGVSDP
Ga0268336_103153613300028152PhyllosphereVTDGSCWSELTRGVAVVDALVLALPRRGSVEVVTGSAEDVLTSEVVSAEAAGCVDC
Ga0268324_101138223300028251PhyllosphereDGSCWSELTGGVAIVEALVLLLPGRGSVEVVTGSAEEVSIFEVVTAEPAGYVDC
Ga0268316_101607713300028253PhyllosphereVMDGSCGSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVTAEAAGCVDCGSID
Ga0268307_102088613300028470PhyllosphereVTDGSCWSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVSAEAAGYVDC
Ga0268339_101316213300028526PhyllosphereVTDGSCGSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVTAEAA
Ga0214492_100725213300032464Switchgrass PhyllosphereVTDGSCGSELTGGVAVMEALVLALPGRGSVEVVTGSAEEVSTYEVVSAEAAGCVDCGTRDSSP
Ga0214493_112573413300032465Switchgrass PhyllosphereVTDGSCWSELTGGVAVVEALVLALPGRGSVEVVTGSAEDV
Ga0214503_128034113300032466Switchgrass PhyllosphereGSCWSELTGGVAIVEALVLALHGRGSVEVVTGSAEEVSISEVVTAEPAGCVDY
Ga0214491_115668413300032469Switchgrass PhyllosphereVTDGSCWSELPAGSKLTGGVAVVEALVLALPGRGSVEVVTGLAE
Ga0214490_115827213300032502Switchgrass PhyllosphereSSDGVPSVTDGSCWSELPAGSEVTGGVAVVEALVLALPGRGSVDVVTGSVEEVSISEVVSAEATGCVDC
Ga0321339_109311713300032551Switchgrass PhyllosphereVTDGSCWSELPAGSELTGGVAVVEALMLALPGRGSVEVVTGSAEEVSTSEVVSAEAAGCVDCGTIDPSPPP
Ga0214484_110931613300032591Switchgrass PhyllosphereVTDGSCWSELPAGSELTGGVAVVEALVLALPGRGSVEVVTG
Ga0214499_114873423300032697Switchgrass PhyllosphereVTDGSCWSEQPAGSELTGGIVVVEALVLALPGRGSVEVVAGSAEEVSTSKVESAKAAGCVDCGTI
Ga0214499_118272013300032697Switchgrass PhyllosphereVTDGSYWSELTGGVAVVEALVLALPGRGSVEVVTGSAEEVSTSEVVSAEAAGCADCRTIDSSRNYRLLSSSP
Ga0314746_109995213300032758Switchgrass PhyllosphereVTDGSCWSELTEGVAIVEALVLALPGRGSVEVVSGSAEE
Ga0314733_102270113300032761Switchgrass PhyllosphereVTDGSCWSELTGGVAIIEALVLALPRRGSVEVVTDSAEDVSTSEVVS
Ga0314731_107825413300032790Switchgrass PhyllosphereSELPAGSELTGGVAVVEALVLALPGRGSVEVVTGSAEDVSTSEVVSAEAAGCVDC
Ga0314745_104284123300032812Switchgrass PhyllosphereVTDGSCWSELTEGVAIVEALVLALPGRGSVEVVSGSAEEVSTSEVVAAKPAGCVDC
Ga0314747_102368013300032890Switchgrass PhyllosphereVTDGSCWSELPAGSELTGGVAVVEALVLALPGRGSVDVVTGSAKEVSTSDVVSAEAAGCVDC
Ga0314759_121501213300033535Switchgrass PhyllosphereVTDGSCWSELTEGVAIVEALVLALPGRGSVEVVSGSAEEVSTSEVVAAEPVGCVDC
Ga0314759_128660413300033535Switchgrass PhyllosphereVTDGSCGSELTGGVAVVEALVLALLGRGSVEVVIGSAEEVS
Ga0314766_132893423300033537Switchgrass PhyllosphereVRVIVVVVSSDGVPSVTDGSCWSELPAGSELTGGVAVVEALVLALPGRGSVEVVTGSAEDVSTSEVVSAEAAGCVDC

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Biomedical Sciences Research Center "Alexander Fleming"
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