Metagenome Family F086791

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086791
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	73 residues
Representative Sequence	MSNNYLFSMYCGDTYLDVYGYVDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR
Number of Associated Samples	72
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.82 %
% of genes near scaffold ends (potentially truncated)	23.64 %
% of genes from short scaffolds (< 2000 bps)	65.45 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.091 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (51.818 % of family members)
Environment Ontology (ENVO)	Unclassified (90.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (89.091 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.33% β-sheet: 24.00% Coil/Unstructured: 46.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF13539	Peptidase_M15_4	10.00
PF13884	Peptidase_S74	4.55
PF07460	NUMOD3	3.64
PF00182	Glyco_hydro_19	2.73
PF00149	Metallophos	1.82
PF11351	GTA_holin_3TM	1.82
PF14549	P22_Cro	0.91
PF02557	VanY	0.91
PF16786	RecA_dep_nuc	0.91
PF13392	HNH_3	0.91
PF13412	HTH_24	0.91
PF12705	PDDEXK_1	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	2.73
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	2.73
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	0.91
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
All Organisms	root	All Organisms	40.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Viruses	superkingdom	All Organisms → Viruses	32.73 %
cellular organisms	root	All Organisms → cellular organisms	8.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	29.09 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	29.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.55 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	29.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.73 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.91 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	29.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.91 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	28.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.64 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	2.73 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.91 %
Desulfurellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	28.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.64 %
Parvibaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum	2.73 %
unclassified Desulfurellales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales	0.91 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	28.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.64 %
unclassified Parvibaculum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum	2.73 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.91 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.09 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	28.18 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.64 %
Parvibaculum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	2.73 %
Clostridium botulinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	0.91 %
Desulfurellales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c004924	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300000176\|TB03JUN2009E_c008673	All Organisms → Viruses → Predicted Viral	1890	Open in IMG/M
3300000176\|TB03JUN2009E_c012559	Not Available	1452	Open in IMG/M
3300000176\|TB03JUN2009E_c024657	Not Available	878	Open in IMG/M
3300002091\|JGI24028J26656_1000168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	28098	Open in IMG/M
3300002092\|JGI24218J26658_1002440	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4782	Open in IMG/M
3300002307\|JGI24890J29729_1019654	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1631	Open in IMG/M
3300002930\|Water_101010	Not Available	5529	Open in IMG/M
3300002930\|Water_101559	Not Available	4225	Open in IMG/M
3300003375\|JGI26470J50227_1004875	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3820	Open in IMG/M
3300003375\|JGI26470J50227_1047207	Not Available	767	Open in IMG/M
3300003375\|JGI26470J50227_1050663	Not Available	726	Open in IMG/M
3300003375\|JGI26470J50227_1050718	Not Available	726	Open in IMG/M
3300003375\|JGI26470J50227_1056734	Not Available	664	Open in IMG/M
3300003795\|Ga0007853_1006646	Not Available	765	Open in IMG/M
3300004448\|Ga0065861_1026412	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1193	Open in IMG/M
3300004460\|Ga0066222_1043730	Not Available	738	Open in IMG/M
3300004460\|Ga0066222_1156264	Not Available	525	Open in IMG/M
3300004684\|Ga0065168_1004849	All Organisms → Viruses → Predicted Viral	2150	Open in IMG/M
3300004773\|Ga0007795_10025416	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1971	Open in IMG/M
3300006108\|Ga0007862_1065649	Not Available	717	Open in IMG/M
3300006109\|Ga0007870_1007674	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300006112\|Ga0007857_1034883	Not Available	1008	Open in IMG/M
3300006112\|Ga0007857_1105410	Not Available	507	Open in IMG/M
3300006118\|Ga0007859_1120352	Not Available	517	Open in IMG/M
3300006119\|Ga0007866_1002263	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5063	Open in IMG/M
3300006121\|Ga0007824_1106246	Not Available	527	Open in IMG/M
3300006805\|Ga0075464_11032409	Not Available	516	Open in IMG/M
3300009068\|Ga0114973_10036607	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2944	Open in IMG/M
3300009068\|Ga0114973_10053225	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2385	Open in IMG/M
3300009068\|Ga0114973_10214943	Not Available	1046	Open in IMG/M
3300009068\|Ga0114973_10367333	Not Available	758	Open in IMG/M
3300009151\|Ga0114962_10082225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	2038	Open in IMG/M
3300009152\|Ga0114980_10002604	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12599	Open in IMG/M
3300009152\|Ga0114980_10050733	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2517	Open in IMG/M
3300009152\|Ga0114980_10522870	Not Available	674	Open in IMG/M
3300009152\|Ga0114980_10522967	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	674	Open in IMG/M
3300009152\|Ga0114980_10759503	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	541	Open in IMG/M
3300009154\|Ga0114963_10252230	Not Available	1000	Open in IMG/M
3300009155\|Ga0114968_10004302	Not Available	10625	Open in IMG/M
3300009155\|Ga0114968_10064978	Not Available	2302	Open in IMG/M
3300009158\|Ga0114977_10072998	Not Available	2102	Open in IMG/M
3300009158\|Ga0114977_10289647	Not Available	936	Open in IMG/M
3300009159\|Ga0114978_10281402	Not Available	1024	Open in IMG/M
3300009159\|Ga0114978_10297916	Not Available	988	Open in IMG/M
3300009159\|Ga0114978_10528962	Not Available	689	Open in IMG/M
3300009160\|Ga0114981_10563047	Not Available	607	Open in IMG/M
3300009161\|Ga0114966_10119539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfurellales → unclassified Desulfurellales → Desulfurellales bacterium	1748	Open in IMG/M
3300009163\|Ga0114970_10676620	Not Available	550	Open in IMG/M
3300009164\|Ga0114975_10154066	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1313	Open in IMG/M
3300009164\|Ga0114975_10345637	Not Available	818	Open in IMG/M
3300009175\|Ga0073936_10142659	Not Available	1824	Open in IMG/M
3300009180\|Ga0114979_10054228	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2512	Open in IMG/M
3300009184\|Ga0114976_10333839	Not Available	804	Open in IMG/M
3300009185\|Ga0114971_10186997	Not Available	1233	Open in IMG/M
3300009502\|Ga0114951_10563126	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	550	Open in IMG/M
3300010158\|Ga0114960_10480978	Not Available	598	Open in IMG/M
3300010160\|Ga0114967_10426546	Not Available	657	Open in IMG/M
3300010885\|Ga0133913_10772942	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2506	Open in IMG/M
3300012352\|Ga0157138_1002675	Not Available	3068	Open in IMG/M
3300013093\|Ga0164296_1219662	Not Available	727	Open in IMG/M
3300017747\|Ga0181352_1118848	Not Available	714	Open in IMG/M
3300017754\|Ga0181344_1000110	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	33878	Open in IMG/M
3300017754\|Ga0181344_1124452	Not Available	742	Open in IMG/M
3300020695\|Ga0214190_1009815	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300020717\|Ga0214248_1004982	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2521	Open in IMG/M
3300020718\|Ga0214178_1004875	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2291	Open in IMG/M
3300020727\|Ga0214246_1038499	Not Available	740	Open in IMG/M
3300020731\|Ga0214170_1015316	Not Available	1401	Open in IMG/M
3300021135\|Ga0214247_1019739	Not Available	1218	Open in IMG/M
3300022555\|Ga0212088_10200513	Not Available	1584	Open in IMG/M
3300025365\|Ga0208621_1033240	Not Available	595	Open in IMG/M
3300025390\|Ga0208743_1006470	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1991	Open in IMG/M
3300025396\|Ga0208874_1017556	Not Available	1176	Open in IMG/M
3300025532\|Ga0208249_1131477	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	543	Open in IMG/M
3300025606\|Ga0207954_1052983	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1097	Open in IMG/M
3300027708\|Ga0209188_1058951	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1670	Open in IMG/M
3300027712\|Ga0209499_1244707	Not Available	622	Open in IMG/M
3300027733\|Ga0209297_1000274	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	34716	Open in IMG/M
3300027733\|Ga0209297_1018960	Not Available	3288	Open in IMG/M
3300027733\|Ga0209297_1030720	Not Available	2502	Open in IMG/M
3300027733\|Ga0209297_1086036	Not Available	1365	Open in IMG/M
3300027734\|Ga0209087_1004188	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7882	Open in IMG/M
3300027734\|Ga0209087_1070877	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1534	Open in IMG/M
3300027734\|Ga0209087_1137651	Not Available	994	Open in IMG/M
3300027736\|Ga0209190_1044525	All Organisms → cellular organisms → Bacteria → Proteobacteria	2283	Open in IMG/M
3300027741\|Ga0209085_1274060	Not Available	652	Open in IMG/M
3300027746\|Ga0209597_1002269	Not Available	12255	Open in IMG/M
3300027746\|Ga0209597_1066174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1729	Open in IMG/M
3300027746\|Ga0209597_1181654	Not Available	875	Open in IMG/M
3300027759\|Ga0209296_1233273	Not Available	767	Open in IMG/M
3300027759\|Ga0209296_1298113	Not Available	642	Open in IMG/M
3300027759\|Ga0209296_1378500	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	536	Open in IMG/M
3300027763\|Ga0209088_10001688	Not Available	14040	Open in IMG/M
3300027777\|Ga0209829_10149829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	1068	Open in IMG/M
3300027777\|Ga0209829_10244410	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	758	Open in IMG/M
3300027782\|Ga0209500_10130719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.	1205	Open in IMG/M
3300027963\|Ga0209400_1000513	All Organisms → cellular organisms → Bacteria	33878	Open in IMG/M
3300027963\|Ga0209400_1002379	Not Available	14347	Open in IMG/M
3300027963\|Ga0209400_1203165	Not Available	819	Open in IMG/M
3300027969\|Ga0209191_1011091	Not Available	4770	Open in IMG/M
3300027969\|Ga0209191_1096018	Not Available	1270	Open in IMG/M
3300027971\|Ga0209401_1006302	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7060	Open in IMG/M
3300028025\|Ga0247723_1000309	Not Available	33079	Open in IMG/M
3300028025\|Ga0247723_1014338	Not Available	2893	Open in IMG/M
3300028392\|Ga0304729_1001308	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16697	Open in IMG/M
3300031759\|Ga0316219_1014296	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4181	Open in IMG/M
3300031759\|Ga0316219_1157156	Not Available	838	Open in IMG/M
3300032560\|Ga0316223_1054461	All Organisms → Viruses → Predicted Viral	1557	Open in IMG/M
3300032561\|Ga0316222_1132215	Not Available	951	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.18%
Terrestrial	Environmental → Terrestrial	1.82%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	92.73%
Marine	Environmental → Aquatic → Marine	5.45%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.82%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	55.45%
Lentic	Environmental → Aquatic → Freshwater → Lentic	36.36%
Coastal	Environmental → Aquatic → Marine → Coastal	3.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.82%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.82%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	55.45%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	23.64%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	6.36%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	6.36%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.64%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.82%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.82%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	51.82%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	18.18%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	6.36%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	6.36%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.73%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	2.73%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.73%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.82%
Estuary Water	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuary Water	1.82%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.91%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.91%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.91%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300002930	Estuary water microbial communities from Pearl Estuary, Zhujiang, China	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003795	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH11Jul08	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004773	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006109	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH04Jul08	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300006119	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Jul07	Environmental	Open in IMG/M
3300006121	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE05Oct08	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300010158	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300020695	Freshwater microbial communities from Trout Bog Lake, WI - 15JUL2008 epilimnion	Environmental	Open in IMG/M
3300020717	Freshwater microbial communities from Trout Bog Lake, WI - 15JUN2009 hypolimnion	Environmental	Open in IMG/M
3300020718	Freshwater microbial communities from Trout Bog Lake, WI - 17SEP2007 epilimnion	Environmental	Open in IMG/M
3300020727	Freshwater microbial communities from Trout Bog Lake, WI - 29MAY2009 hypolimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300021135	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300025365	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH26May08 (SPAdes)	Environmental	Open in IMG/M
3300025390	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH04Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025396	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025532	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA1M (SPAdes)	Environmental	Open in IMG/M
3300025606	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA0M (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027734	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027759	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130206_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027963	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027971	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028025	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FC	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M
3300032561	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18011	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0049242	3300000176	Freshwater	MSNNYLFSMYCGDTYLDIYGYVDEDEPSVGHVGGIDIEDVCICDTTTSVWEMIHSLNFDKFNEQAQQSWSERNYK*
TB03JUN2009E_0086731	3300000176	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTEISVWEMIHALNFDKFDKQAQESWRG*
TB03JUN2009E_0125591	3300000176	Freshwater	MAKASNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFNEAAQM
TB03JUN2009E_0246572	3300000176	Freshwater	MAKASNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFNEAAQMQWGDK*
JGI24028J26656_100016843	3300002091	Lentic	MAKPSNYLMTMYCGDTLLDVYGEVDNTEPSLGHVGGIDIEDVYIADTDISVWEMLHSLNFDKFNEAAQMQWGNK*
JGI24218J26658_100244012	3300002092	Lentic	MYCGDTYLDIYGYVDEDEPSVGHVGGIDIEDVCICDTTTSVWEMIHSLNFDKFNEQAQQSWAERNDK*
JGI24890J29729_10196545	3300002307	Lentic	MSNNYLFSMYCGDTYLDIYGYVDEDEPSVGHVGGIDIEDVCICDTTTSVWEMIHSLNFDKFNEQAQQSWAERNDK*
Water_1010101	3300002930	Estuary Water	MRKNYLFSMWLGDTYLDIHGSADPDEPSLGHIGGIDIEDVFICDTKTSVLEMIHALNFDEFVKKAEEAYSERQR*
Water_1015594	3300002930	Estuary Water	MYCGDTYLDIYGYEDKDEPSVGHVGGIEIEDVCTCDTKTSVLEMIIALNYDKFNEQAQMAWSERNDK*
JGI26470J50227_10048754	3300003375	Freshwater	MAKASNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFNEAAQMHWGNK*
JGI26470J50227_10472073	3300003375	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTEISVWEMIHALDFDKFDKQAQ
JGI26470J50227_10506631	3300003375	Freshwater	MAKASNFLMTMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTDISVWEMIHALDFDKFDKQAQESWGDRR*
JGI26470J50227_10507181	3300003375	Freshwater	MAKASNFLMTMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTEISVWEMIHALDFDKFDKQAQESWGDRR*
JGI26470J50227_10567341	3300003375	Freshwater	MPKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTDISVWEMIHALDFDKFDKQAQESWGDRR*
Ga0007853_10066463	3300003795	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTEISVWEMIHALDFDKFDKQAQESWRG*
Ga0065861_10264124	3300004448	Marine	MSNYLFSMYCGDTYLDIYGSADPDEPSLGHVGGIDIEDVCTCDTKTSVWEMIQALNPDAFVKQAEEAYSERQR*
Ga0066222_10437302	3300004460	Marine	MKRNYLFSMWLGDTYLDIHGSAEPDEPSLGHSGCLNIEDVFVCDTKTSVLEMIHALNFDQFVKQAEEAYSELEKS*
Ga0066222_11562642	3300004460	Marine	MRKNYLFSMWLGDTYLDIHGSAEPDEPSLGHSGCLDIEDVFVCDTKTSVLEMIHALNFDQFVKQAEEAYSELEKS*
Ga0065168_10048495	3300004684	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTEISVWEMIHALDFDKFDKQAQESWGDRR*
Ga0007795_100254162	3300004773	Freshwater	MAKDKDYLLSMYCGDTFLDVYGYEDEDDDTVGHVGGIDIEDVRIANTDISVWEMIHSLGFDKFNEKAHDAWAERIYK*
Ga0007862_10656493	3300006108	Freshwater	MSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTDISVWEMIHALDFDKFDKQAQESWGDRR*
Ga0007870_10076743	3300006109	Freshwater	MAKPSNYLMTMYCGDTLLDVYGEVDRDEPSVGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFDEAAQMHWGNR*
Ga0007857_10348832	3300006112	Freshwater	MAKASNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTEISVWEMIHALDFDKFDKQAQESWGDRR*
Ga0007857_11054102	3300006112	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGLDIEDVCIADTEISVWEMIHALDFDKFDKQAQESWGDR
Ga0007859_11203522	3300006118	Freshwater	MPKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTDISVWEMIHALDFDKFDKQAQESWGDR
Ga0007866_10022635	3300006119	Freshwater	MYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTDISVWEMIHALDFDKFDKQAQESWGDRR*
Ga0007824_11062461	3300006121	Freshwater	MAKASNYLISMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMIHALDFDKFDKQAQESWGDRR*
Ga0075464_110324092	3300006805	Aqueous	MRKNYLFSMWLGDTYLDIHGSADPDEPSLGHIGGIDIEDVFICDTKTSVLEMIHALNFDEFVKKAEEAYSELEKS*
Ga0114973_100366073	3300009068	Freshwater Lake	MSNNYLFSMYCGDTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK*
Ga0114973_100532255	3300009068	Freshwater Lake	MSNNYLFSMYVGDTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERND
Ga0114973_102149432	3300009068	Freshwater Lake	LASEIEKEQQMRKNYLFSMWLGDTYLDIHGSADPDEPNLGHVGGIDIEDVFICDTKTSVLEMIHALNFDEFVKQAEEAYSELDKT*
Ga0114973_103673332	3300009068	Freshwater Lake	MNNNYLFSMYCGNTYLDVYGYIDKDDPTVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK
Ga0114962_100822252	3300009151	Freshwater Lake	MSNNYLFSMYVGNTYLDVYGYVDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK*
Ga0114980_100026041	3300009152	Freshwater Lake	MYCGDTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK*
Ga0114980_100507336	3300009152	Freshwater Lake	MSKNYLFSMYVGDTYLDIHGSAEPDEPSLGHSGSLDIEDVFICDTKTSVLEMIHALNFNEFVKQAEEAYSELEK
Ga0114980_105228703	3300009152	Freshwater Lake	MSNYLFSMYVGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSE
Ga0114980_105229672	3300009152	Freshwater Lake	MRKNYLFSMWLGDTYLDIHGSADPDEPNLGHVGGIDIEDVFICDTKTSVLEMIHALNFDEFVKQAEEAYSELDKT*
Ga0114980_107595031	3300009152	Freshwater Lake	MYVGNTYLDVYGYIDKDEPSVGHVGGIDIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSE
Ga0114963_102522302	3300009154	Freshwater Lake	MSNNYLFSMYCGDTYLDVYGYVDNDEPSLGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQQAWAERNYK*
Ga0114968_100043023	3300009155	Freshwater Lake	MSNYLFSMYCGNTYLDVYGYIDKDDPTVGHVGGIDIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR*
Ga0114968_100649786	3300009155	Freshwater Lake	MSNNYLFSMYVGDTYLDIHGSAEPDEPSLGHSGSLDIEDVFICDTKTSVLEMIHALNFNEFVKQAEEAYSELEKS*
Ga0114977_100729985	3300009158	Freshwater Lake	MSNNYLFSMYVGDTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK*
Ga0114977_102896472	3300009158	Freshwater Lake	MSNNYLFSMYVGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR*
Ga0114978_102814022	3300009159	Freshwater Lake	MRKNYLFSMWLGDTYLDIHGSADPDEPNLGHVGGIDIEDVFICDTKTSVLEMIHALNFDEFVKQAEEAYSELEKS*
Ga0114978_102979162	3300009159	Freshwater Lake	MSNYLFSMYVGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK*
Ga0114978_105289621	3300009159	Freshwater Lake	MSKNYLFSMYVGDTYLDIHGSAEPDEPSLGHSGSLDIEDVFICDTKTSVLEMIHALNFNEFVKQAEEAYSELEKS*
Ga0114981_105630471	3300009160	Freshwater Lake	AYFLKSEIDMRKNYLFSMWLGDTYLDIHGSADPDEPNLGHVGGIDIEDVFICDTKTSVLEMIHALNFDEFVKQAEEAYSELDKT*
Ga0114966_101195392	3300009161	Freshwater Lake	MRKNYLFSMWLGDTYLDIHGSADPDEPSLGHIGGIDIEDVFICDTKTSVLEMIHALNFDQFVKQAEEAYSELEKS*
Ga0114970_106766201	3300009163	Freshwater Lake	YLFSMYCGNTYLDVYGYIDKDDPTVGHVGGIDIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR*
Ga0114975_101540661	3300009164	Freshwater Lake	NNYLFSMYCGDTYLDIYGYVDKDEPSVGHVGGIDIEDVCICDTTTSVWEMIHSLNFDKFNEQAQQSWAERNYK*
Ga0114975_103456372	3300009164	Freshwater Lake	MYCGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIQALNYDKFNEQAQQAWSERNDR*
Ga0073936_101426593	3300009175	Freshwater Lake Hypolimnion	MAKPSNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFNEAAQMHWGNR*
Ga0114979_100542286	3300009180	Freshwater Lake	MYVGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK*
Ga0114976_103338391	3300009184	Freshwater Lake	MYVGDTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQ
Ga0114971_101869972	3300009185	Freshwater Lake	MYCGNTYLDIYGYVDKDDPTVGHVGGIEIEDVCTCDTKTSVWEMIQTLNFDKFNEQAQMAWSERNDR*
Ga0114951_105631262	3300009502	Freshwater	MAKPSNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFNEDAQMHWGNR*
Ga0114960_104809782	3300010158	Freshwater Lake	MRKNYLFSMWLGDTYLDVHGSAEPDEPSLGHSGCLDIEDVFICDTKTSVLEMIHALNFDEFVKQAEEAYSELDKT*
Ga0114967_104265462	3300010160	Freshwater Lake	MSNNYLFSMYCGDTYLDVYGYVDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR*
Ga0133913_107729421	3300010885	Freshwater Lake	MSNNYLFSMYCGDTYLDIYGYVDKDEPSVGHVGGIDIEDVCICDTTTSVWEMIHSLNFDKFNEQAQQSWAERNYK*
Ga0157138_100267510	3300012352	Freshwater	NKENQMNHVFSMYYGDTYLDIYGYEDADEPNVGHVGGIDIEDVKIADTDVSVLEMIHALNWDKFEAKVQQEYAESDHS*
Ga0164296_12196621	3300013093	Freshwater	MPKQSNYLMTMYCGDTLLDVYGEVDNDEPDVGHVGGIDIEDVCIADTDISVWEMLHSLNFEKFNDQAQQHWGNK*
Ga0181352_11188483	3300017747	Freshwater Lake	FSMYCGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK
Ga0181344_100011026	3300017754	Freshwater Lake	MSNYLFSMYCGDTYLDIYGYVDKDEPSLGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR
Ga0181344_11244521	3300017754	Freshwater Lake	MSNYLFSMYCGDTYLDVYGYVDKDEPSLGHVGGIEIEDVCTCDTKTSVLEMIHALNFDKFNEQAQMAWSERNDK
Ga0214190_10098153	3300020695	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGLDIEDVCIADTEISVWEMIHALNFDKFDKQAQESWRG
Ga0214248_10049824	3300020717	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTEISVWEMIHALDFDKFDKQAQESWRG
Ga0214178_10048751	3300020718	Freshwater	MAKASNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFNEAAQMQWGDK
Ga0214246_10384991	3300020727	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTEISVWEMIHALNFDKFDKQAQESWRG
Ga0214170_10153165	3300020731	Freshwater	MPKASNFLMSMYCGDTLLDVYGYVDRDEPSVGHVGGIDIEDVCIADTDISVWEMIHALDFDKFDKQAQESWGDRR
Ga0214247_10197394	3300021135	Freshwater	MAKASNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFNEAAQMHWGNK
Ga0212088_102005132	3300022555	Freshwater Lake Hypolimnion	MAKPSNYLMTMYCGDTLLDVYGEVDNDEPSLGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFNEAAQMHWGNR
Ga0208621_10332402	3300025365	Freshwater	MPKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTDISVWEMIHALDFDKFDKQAQESWGDRR
Ga0208743_10064705	3300025390	Freshwater	MAKPSNYLMTMYCGDTLLDVYGEVDRDEPSVGHVGGIDIEDVCIADTDISVWEMLHSLNFDKFDEAAQMHWGNR
Ga0208874_10175563	3300025396	Freshwater	MAKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTEISVWEMIHALDFDKFDKQAQESWGDRR
Ga0208249_11314771	3300025532	Freshwater	DKDYLLSMYCGDTFLDVYGYEDEDDDTVGHVGGIDIEDVRIANTDISVWEMIHSLGFDKFNEKAHDAWAERIYK
Ga0207954_10529831	3300025606	Freshwater	MAKDKDYLLSMYCGDTFLDVYGYEDEDDDTVGHVGGIDIEDVRIANTDISVWEMIHSLGFDKFNEKAHDAWAERIYK
Ga0209188_10589516	3300027708	Freshwater Lake	MRKNYLFSMWLGDTYLDIHGSADPDEPSLGHIGGIDIEDVFICDTKTSVLEMIHALNFDEFVKKAEEAYSELEKS
Ga0209499_12447071	3300027712	Freshwater Lake	MSNNYLFSMYVGNTYLDVYGYVDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK
Ga0209297_100027451	3300027733	Freshwater Lake	MSNNYLFSMYVGDTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK
Ga0209297_10189602	3300027733	Freshwater Lake	MYVGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR
Ga0209297_10307207	3300027733	Freshwater Lake	MSNNYLFSMYCGDTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK
Ga0209297_10860362	3300027733	Freshwater Lake	MSNNYLFSMYCGNTYLDVYGYVDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR
Ga0209087_100418815	3300027734	Freshwater Lake	MWLGDTYLDIHGSAEPDEPSLGHSGCLDIEDVFVCDTKTSVLEMIHALNFDQFVKQAEEAYSELEKS
Ga0209087_10708775	3300027734	Freshwater Lake	MRKNYLFSMWLGDTYLDIHGSADPDEPSLGHIGGIDIEDVFICDTKTSVLEMIHALNFDEFVKKAEEAYSERQR
Ga0209087_11376513	3300027734	Freshwater Lake	MSNYLFSMYVGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK
Ga0209190_10445254	3300027736	Freshwater Lake	MSNYLFSMYCGDTYLDIYGSADPDEPSLGHVGGIDIEDVCTCDTKTSVWEMIQALNPDAFVKQAEEAYSER
Ga0209085_12740602	3300027741	Freshwater Lake	MSNNYLFSMYCGDTYLDVYGYVDNDEPSLGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQQAWAERNYK
Ga0209597_100226913	3300027746	Freshwater Lake	MYCGDTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK
Ga0209597_10661742	3300027746	Freshwater Lake	MRKNYLFSMWLGDTYLDIHGSADPDEPNLGHVGGIDIEDVFICDTKTSVLEMIHALNFDEFVKQAEEAYSELDKT
Ga0209597_11816542	3300027746	Freshwater Lake	MSNYLFSMYCGNTYLDIYGYVDKDDPTVGHVGGIEIEDVCTCDTKTSVWEMIQTLNFDKFNEQAQMAWSERNDR
Ga0209296_12332731	3300027759	Freshwater Lake	MSNNYLFSMYVGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFN
Ga0209296_12981131	3300027759	Freshwater Lake	MYCGNTYLDVYGYVDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMA
Ga0209296_13785001	3300027759	Freshwater Lake	MRKNYLFSMWLGDTYLDIHGSADPDEPNLGHVGGIDIEDVFICDTKTSVLEMIHALNFDEFVKQ
Ga0209088_100016886	3300027763	Freshwater Lake	MSKNYLFSMYVGDTYLDIHGSAEPDEPSLGHSGSLDIEDVFICDTKTSVLEMIHALNFNEFVKQAEEAYSELEKS
Ga0209829_101498293	3300027777	Freshwater Lake	MSNNYLFSMYVGDTYLDVYGYIDKDDPTVGHVGGIDIEDVCTCDTKTSVLEMIIALNYDKFNEQAQMAWSERNDR
Ga0209829_102444103	3300027777	Freshwater Lake	MSNYLFSMYCGDTYLDIYGSADPDEPSLGHVGGIDIEDVCTCDTKTSVWEMIQALNPDAFVKKAEEAYSERQR
Ga0209500_101307195	3300027782	Freshwater Lake	SKNYLFSMYVGDTYLDIHGSAEPDEPSLGHSGSLDIEDVFICDTKTSVLEMIHALNFNEFVKQAEEAYSELEKS
Ga0209400_100051344	3300027963	Freshwater Lake	MSNYLFSMYCGDTYLDIYGSADPDEPSLGHVGGIDIEDVCTCDTKTSVWEMIQALNPDAFVKQAEEAYSERQR
Ga0209400_100237911	3300027963	Freshwater Lake	MSNYLFSMYCGNTYLDVYGYIDKDDPTVGHVGGIDIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR
Ga0209400_12031652	3300027963	Freshwater Lake	MSNNYLFSMYVGDTYLDIHGSAEPDEPSLGHSGSLDIEDVFICDTKTSVLEMIHALNFNEFVKQAEEAYSELEKS
Ga0209191_10110911	3300027969	Freshwater Lake	MYCGNTYLDVYGYVDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR
Ga0209191_10960181	3300027969	Freshwater Lake	MSNNYLFSMYVGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDR
Ga0209401_10063021	3300027971	Freshwater Lake	LIYNCITRLASEIEKEQQMRKNYLFSMWLGDTYLDIHGSADPDEPNLGHVGGIDIEDVFICDTKTSVLEMIHALNFDEFVKQAEEAYSELDKT
Ga0247723_100030942	3300028025	Deep Subsurface Sediment	MSNNYLFSMYCGNTYLDVYGYIDKDEPSVGHVGGIEIEDVCTCDTKTSVWEMIHALNFDKFNEQAQMAWSERNDK
Ga0247723_10143383	3300028025	Deep Subsurface Sediment	MSNYLFSMYCGDTYLDVYGYVDKDEPSVGHVGGIDIEDVCTCDTKTSVLEMICALNFDKFNEQAQQAWAERNDK
Ga0304729_100130822	3300028392	Freshwater Lake	MWLGDTYLDIHGSADPDEPSLGHIGGIDIEDVFICDTKTSVLEMIHALNFDEFVKKAEEAYSELEKS
Ga0316219_10142968	3300031759	Freshwater	MPKQSNYLMTMYCGDTLLDVYGEVDNDEPDVGHVGGIDIEDVCIADTDISVWEMLHSLNFEKFNDQAQQHWGNK
Ga0316219_11571564	3300031759	Freshwater	MPKASNFLMSMYCGDTLLDVYGYVDKDEPSVGHVGGIDIEDVCIADTDISVWEMIHALDFDKFD
Ga0316223_10544612	3300032560	Freshwater	MPKQSNYLMTMYCGDTLLDVYGKVDNDEPDVGHVGGIDIEDVCIADTDISVWEMLHSLNFEKFNDQAQQHWGNK
Ga0316222_11322152	3300032561	Freshwater	MPKQSNYLMTMHCGDTLLDVYGEVDNDEPDVGHVGGIDIEDVCIADTDISVWEMLHSLNFEKFNDQAQQHWGNK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086791

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences