NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F089050

Metagenome / Metatranscriptome Family F089050

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F089050
Family Type Metagenome / Metatranscriptome
Number of Sequences 109
Average Sequence Length 50 residues
Representative Sequence MVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGSGSNKVEFRNGTTA
Number of Associated Samples 81
Number of Associated Scaffolds 109

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 24.77 %
% of genes near scaffold ends (potentially truncated) 97.25 %
% of genes from short scaffolds (< 2000 bps) 93.58 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (89.908 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine
(28.440 % of family members)
Environment Ontology (ENVO) Unclassified
(91.743 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(87.156 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.25
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 109 Family Scaffolds
PF06094GGACT 3.67
PF00709Adenylsucc_synt 0.92

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 109 Family Scaffolds
COG0104Adenylosuccinate synthaseNucleotide transport and metabolism [F] 0.92


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A89.91 %
All OrganismsrootAll Organisms10.09 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000142|LPaug09P16500mDRAFT_c1011756Not Available1665Open in IMG/M
3300000142|LPaug09P16500mDRAFT_c1035819Not Available755Open in IMG/M
3300000152|LPjun08P12500mDRAFT_c1013001Not Available1445Open in IMG/M
3300000157|LPaug08P261000mDRAFT_c1044122Not Available570Open in IMG/M
3300000173|LPfeb10P16500mDRAFT_c1014454Not Available732Open in IMG/M
3300000222|LPjun09P12500mDRAFT_1038646Not Available830Open in IMG/M
3300000248|LPfeb09P12500mDRAFT_1017136Not Available889Open in IMG/M
3300000260|LP_A_09_P20_500DRAFT_1020541Not Available951Open in IMG/M
3300000323|LPaug09P202000mDRAFT_1051500Not Available543Open in IMG/M
3300001731|JGI24514J20073_1016014Not Available719Open in IMG/M
3300002511|JGI25131J35506_1019883Not Available924Open in IMG/M
3300005402|Ga0066855_10246229Not Available585Open in IMG/M
3300005969|Ga0066369_10081796Not Available1112Open in IMG/M
3300006011|Ga0066373_10072724Not Available957Open in IMG/M
3300006082|Ga0081761_1223817Not Available888Open in IMG/M
3300006304|Ga0068504_1104670Not Available716Open in IMG/M
3300006308|Ga0068470_1110017Not Available2496Open in IMG/M
3300006308|Ga0068470_1219119Not Available1619Open in IMG/M
3300006308|Ga0068470_1865581Not Available840Open in IMG/M
3300006309|Ga0068479_1108526Not Available781Open in IMG/M
3300006310|Ga0068471_1081127All Organisms → cellular organisms → Bacteria6857Open in IMG/M
3300006310|Ga0068471_1352702Not Available735Open in IMG/M
3300006310|Ga0068471_1583107Not Available978Open in IMG/M
3300006311|Ga0068478_1242177All Organisms → Viruses → Predicted Viral1042Open in IMG/M
3300006324|Ga0068476_1337975Not Available846Open in IMG/M
3300006325|Ga0068501_1202095All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → unclassified Thermoplasmata → Thermoplasmata archaeon844Open in IMG/M
3300006325|Ga0068501_1479389Not Available840Open in IMG/M
3300006326|Ga0068477_1185551Not Available693Open in IMG/M
3300006326|Ga0068477_1509950Not Available753Open in IMG/M
3300006326|Ga0068477_1514395Not Available779Open in IMG/M
3300006335|Ga0068480_1400858Not Available892Open in IMG/M
3300006335|Ga0068480_1498494Not Available1765Open in IMG/M
3300006335|Ga0068480_1816730Not Available529Open in IMG/M
3300006336|Ga0068502_1201253All Organisms → Viruses → Predicted Viral3317Open in IMG/M
3300006336|Ga0068502_1438048Not Available986Open in IMG/M
3300006336|Ga0068502_1919289Not Available720Open in IMG/M
3300006338|Ga0068482_1201536Not Available1019Open in IMG/M
3300006338|Ga0068482_1587621Not Available836Open in IMG/M
3300006338|Ga0068482_1933979Not Available637Open in IMG/M
3300006339|Ga0068481_1342358All Organisms → Viruses → Predicted Viral2435Open in IMG/M
3300006339|Ga0068481_1379714All Organisms → Viruses → Predicted Viral2198Open in IMG/M
3300006339|Ga0068481_1392078Not Available813Open in IMG/M
3300006340|Ga0068503_10274775Not Available722Open in IMG/M
3300006340|Ga0068503_10315508All Organisms → Viruses → Predicted Viral1078Open in IMG/M
3300006341|Ga0068493_10280027Not Available890Open in IMG/M
3300006344|Ga0099695_1065175Not Available1049Open in IMG/M
3300006414|Ga0099957_1093528All Organisms → Viruses → Predicted Viral2254Open in IMG/M
3300006753|Ga0098039_1166521Not Available751Open in IMG/M
3300006900|Ga0066376_10703587Not Available555Open in IMG/M
3300006902|Ga0066372_11025395Not Available503Open in IMG/M
3300006924|Ga0098051_1177071Not Available560Open in IMG/M
3300006929|Ga0098036_1211384Not Available588Open in IMG/M
3300006988|Ga0098064_118276Not Available1013Open in IMG/M
3300007758|Ga0105668_1057616Not Available501Open in IMG/M
3300008051|Ga0098062_1031566Not Available843Open in IMG/M
3300008216|Ga0114898_1073338Not Available1054Open in IMG/M
3300009414|Ga0114909_1152634Not Available610Open in IMG/M
3300009595|Ga0105214_112036Not Available626Open in IMG/M
3300013109|Ga0171649_110431Not Available2979Open in IMG/M
3300013114|Ga0171650_1047372Not Available1474Open in IMG/M
3300013114|Ga0171650_1129006Not Available761Open in IMG/M
3300017775|Ga0181432_1088546Not Available911Open in IMG/M
3300017775|Ga0181432_1115705Not Available807Open in IMG/M
3300017775|Ga0181432_1151436Not Available713Open in IMG/M
3300020285|Ga0211602_1030063Not Available785Open in IMG/M
3300020303|Ga0211692_1044801Not Available544Open in IMG/M
3300020399|Ga0211623_10123346Not Available898Open in IMG/M
3300020425|Ga0211549_10188831Not Available815Open in IMG/M
3300020425|Ga0211549_10345937Not Available606Open in IMG/M
3300020435|Ga0211639_10285460Not Available681Open in IMG/M
3300020435|Ga0211639_10432410Not Available542Open in IMG/M
3300020444|Ga0211578_10504254Not Available509Open in IMG/M
3300020447|Ga0211691_10266165Not Available672Open in IMG/M
3300020458|Ga0211697_10345924Not Available618Open in IMG/M
3300021089|Ga0206679_10417222Not Available711Open in IMG/M
3300021442|Ga0206685_10161734Not Available749Open in IMG/M
3300021442|Ga0206685_10214033Not Available649Open in IMG/M
3300021973|Ga0232635_1187295Not Available521Open in IMG/M
(restricted) 3300024520|Ga0255047_10415283Not Available678Open in IMG/M
3300025046|Ga0207902_1001524All Organisms → Viruses → Predicted Viral1896Open in IMG/M
3300025050|Ga0207892_1020749Not Available732Open in IMG/M
3300025096|Ga0208011_1099039Not Available620Open in IMG/M
3300025125|Ga0209644_1072032Not Available805Open in IMG/M
3300025128|Ga0208919_1046518All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → unclassified Nitrosopumilaceae → Nitrosopumilaceae archaeon1503Open in IMG/M
3300025221|Ga0208336_1021143Not Available1128Open in IMG/M
3300025232|Ga0208571_1035314Not Available666Open in IMG/M
3300025240|Ga0208203_1037745Not Available644Open in IMG/M
3300025243|Ga0208335_1044173Not Available614Open in IMG/M
3300025262|Ga0208060_1014691Not Available1293Open in IMG/M
3300025275|Ga0208057_1051825Not Available586Open in IMG/M
3300025770|Ga0209362_1279920Not Available529Open in IMG/M
3300025873|Ga0209757_10083665Not Available965Open in IMG/M
3300026103|Ga0208451_1009417Not Available989Open in IMG/M
3300026213|Ga0208131_1126151Not Available613Open in IMG/M
3300026321|Ga0208764_10472347Not Available579Open in IMG/M
3300028039|Ga0256380_1070999Not Available503Open in IMG/M
3300028190|Ga0257108_1156616Not Available660Open in IMG/M
3300028190|Ga0257108_1174252Not Available619Open in IMG/M
3300028535|Ga0257111_1175963Not Available645Open in IMG/M
3300031757|Ga0315328_10358017Not Available850Open in IMG/M
3300031801|Ga0310121_10142998All Organisms → Viruses → Predicted Viral1496Open in IMG/M
3300031801|Ga0310121_10645670Not Available567Open in IMG/M
3300031803|Ga0310120_10336636Not Available787Open in IMG/M
3300031803|Ga0310120_10616358Not Available531Open in IMG/M
3300032048|Ga0315329_10290365Not Available867Open in IMG/M
3300032278|Ga0310345_11292024Not Available714Open in IMG/M
3300032360|Ga0315334_10526605Not Available1014Open in IMG/M
3300032360|Ga0315334_10651784Not Available909Open in IMG/M
3300032360|Ga0315334_11596365Not Available557Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine28.44%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine18.35%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine9.17%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine9.17%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean7.34%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater7.34%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine6.42%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine2.75%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.75%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic1.83%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.92%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater0.92%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.92%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.92%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater0.92%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids0.92%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.92%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000142Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500mEnvironmentalOpen in IMG/M
3300000152Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P12 500mEnvironmentalOpen in IMG/M
3300000157Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2008 P26 1000mEnvironmentalOpen in IMG/M
3300000173Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2010 P16 500mEnvironmentalOpen in IMG/M
3300000222Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500mEnvironmentalOpen in IMG/M
3300000248Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P12 500mEnvironmentalOpen in IMG/M
3300000260Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P20_500EnvironmentalOpen in IMG/M
3300000323Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P20 2000mEnvironmentalOpen in IMG/M
3300001731Marine viral communities from the Pacific Ocean - LP-37EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300005402Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73EnvironmentalOpen in IMG/M
3300005969Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_AEnvironmentalOpen in IMG/M
3300006011Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LVEnvironmentalOpen in IMG/M
3300006082Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS907_Anemone_DNAEnvironmentalOpen in IMG/M
3300006304Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000mEnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006309Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006311Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000mEnvironmentalOpen in IMG/M
3300006324Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500mEnvironmentalOpen in IMG/M
3300006325Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500mEnvironmentalOpen in IMG/M
3300006326Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770mEnvironmentalOpen in IMG/M
3300006335Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500mEnvironmentalOpen in IMG/M
3300006336Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500mEnvironmentalOpen in IMG/M
3300006338Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006340Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300006344Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500mEnvironmentalOpen in IMG/M
3300006414Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500mEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006902Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_AEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300006988Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsClEnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300008051Marine viral communities from Cariaco Basin, Caribbean Sea - 23_WHOI_OMZEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300009414Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906EnvironmentalOpen in IMG/M
3300009595Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500EnvironmentalOpen in IMG/M
3300013109Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 250-2.7um, replicate bEnvironmentalOpen in IMG/M
3300013114Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 250-2.7um, replicate aEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020285Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555972-ERR599034)EnvironmentalOpen in IMG/M
3300020303Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556095-ERR599124)EnvironmentalOpen in IMG/M
3300020399Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)EnvironmentalOpen in IMG/M
3300020425Marine microbial communities from Tara Oceans - TARA_B100001765 (ERX556083-ERR598964)EnvironmentalOpen in IMG/M
3300020435Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)EnvironmentalOpen in IMG/M
3300020444Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)EnvironmentalOpen in IMG/M
3300020447Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556090-ERR599159)EnvironmentalOpen in IMG/M
3300020458Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)EnvironmentalOpen in IMG/M
3300021089Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300021973Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Alice_FS923 _150kmerEnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025221Marine microbial communities from the Deep Atlantic Ocean - MP0372 (SPAdes)EnvironmentalOpen in IMG/M
3300025232Marine microbial communities from the Deep Atlantic Ocean - MP0103 (SPAdes)EnvironmentalOpen in IMG/M
3300025240Marine microbial communities from the Deep Atlantic Ocean - MP2914 (SPAdes)EnvironmentalOpen in IMG/M
3300025243Marine microbial communities from the Deep Atlantic Ocean - MP0759 (SPAdes)EnvironmentalOpen in IMG/M
3300025262Marine microbial communities from the Deep Indian Ocean - MP0901 (SPAdes)EnvironmentalOpen in IMG/M
3300025275Marine microbial communities from the Deep Pacific Ocean - MP1649 (SPAdes)EnvironmentalOpen in IMG/M
3300025770Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026103Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)EnvironmentalOpen in IMG/M
3300026213Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73 (SPAdes)EnvironmentalOpen in IMG/M
3300026321Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)EnvironmentalOpen in IMG/M
3300028039Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 2300mEnvironmentalOpen in IMG/M
3300028190Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000mEnvironmentalOpen in IMG/M
3300028535Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500mEnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
LPaug09P16500mDRAFT_101175653300000142MarineMVELNHNVISFNSDTLIKGGHGVLVSVFVTKVGTGSNKVEFRNGTTASAT
LPaug09P16500mDRAFT_103581913300000142MarineMVELNHNVVSFNSDTLIKGDHGVVVGVFVTKVGSGSDKIEF
LPjun08P12500mDRAFT_101300113300000152MarineMVELNHNVISFNSDTLIKGGHGVLVSVFVTKVGTGSNKVEFRNGTTA
LPaug08P261000mDRAFT_104412213300000157MarineMVELNHNVVSFNSDTLIKGGHGVLVNVYITKVGSGSNKVEFRNGTTGSAPIEFTVFTAAQGTYVGIQRRF
LPfeb10P16500mDRAFT_101445413300000173MarineMVELNHNVVSINSNTLIKGSHGVLVNVYVSKVGSGSDKVEFRNGTTGSSP
LPjun09P12500mDRAFT_103864633300000222MarineMVELNHNIVSFNADTLIKGNHGVLVAVFCTKKGSS
LPfeb09P12500mDRAFT_101713633300000248MarineMVELNHNIVSFNADTLIKGNHGVLVAVFCTKKGSSGAKCQFRNGLDATATPIECTIFGEIEGNYQ
LP_A_09_P20_500DRAFT_102054123300000260MarineMVELNHNVVSXNSNTLIKGSHGVLVNVYVSKVGSG
LPaug09P202000mDRAFT_105150013300000323MarineMVELNHNVVSFNSDTLIKGGHGVIVAIFVTKVGSGSNKVEFRN
JGI24514J20073_101601433300001731MarineMVELNHNVVSINSNTLIKGSHGVLVNVYVSKVGSGSDKVE
JGI25131J35506_101988343300002511MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGTGSNKIEFRNGT
Ga0066855_1024622923300005402MarineMVELNHNVVSFNSDTLIKGGHGVLVAVFVTKVGSGSDKVQFRNGTTDSATPIECT
Ga0066369_1008179633300005969MarineMVELNHNVVSFNSNTLVKGSHGVIVEVFVTKIGTGSNKVEFINGTTSSATPIEFTIFTAAQGTYP
Ga0066373_1007272413300006011MarineMVELNHNVVSFNSDTLIKGSHGVLVNVYVSKVGSGSNKVQFRN
Ga0081761_122381713300006082Diffuse Hydrothermal Flow Volcanic VentMVELNHNVVSFNSDTLIKGSHGVLVNVYVSKVGSGTN
Ga0068504_110467023300006304MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGTGSNKIEFRNGTTASATPVECTIFTAIEGNYQNIHRR
Ga0068470_111001743300006308MarineMVELNHNVVSFNSDTLIKGSHGVIVAVFITKVGSGSDKVVFKNGTTSSGTTEFTLFTATQGTYVQINRRFES
Ga0068470_121911913300006308MarineMVELNHNVVSFNSNTLIKGGHGVLVNVYVSKVGSGSDKVIFKNGTDTSGSAEFTIFTAAQGTYVGIN
Ga0068470_186558113300006308MarineMVELNHNVVSFNSDTLIKGDHGVLVAVFVTKKGTGSNKVQFRNGTTDSATPIECTIFTAIEGNYQNIHRR
Ga0068479_110852613300006309MarineMVELNHNVVSFNSDTLIKGAHGVIVCVYVSKTGSGSD*
Ga0068471_1081127123300006310MarineMVELNHNVVSFNSDTLIKGSHGVLVNVYVSKTGSGSNKVEFRNGTTASAPVEFTIFTAAQGTYVGINRR
Ga0068471_135270213300006310MarineMVELNHNVVSFNSDTLIKGSHGVIVNVYISKVGTGSNKVEFRNGTTASDPVEFTIFT
Ga0068471_158310713300006310MarineMVELNHNVVSFNSDTLIKGSHGVIVNVYISKVGTGSNKVEFRNGTTASD
Ga0068478_124217743300006311MarineMVELNHNVVSFNSDTLIKGGHGVIVAIFVTKVGSGSNKVEFRNGTTSSATPVELTIFTAAQGT
Ga0068476_133797513300006324MarineMVELNHNAVSFNSNTLVKGDHGVIVAVFCTKKGST
Ga0068501_120209513300006325MarineMVELNHNVVSFNSDTLIKGAHGVIVNVYISISGSGSDKVVFKNGTTS
Ga0068501_147938913300006325MarineMVELNHSIVSFNSDTLIKGDHGVLVAVFVTKKGTGSNIVQFRNGTTDSATPIECTIF
Ga0068477_118555133300006326MarineMVELNHNVVSFNSDTLIKGGHGVLVAVFVTKVGSGSDKVQFRN
Ga0068477_150995013300006326MarineMVELNHNVVSFNSDTLIKGNHGVIVGVFVTKVGSGSDKVIFKNGTSGSGTAEFTIFTAAQGT
Ga0068477_151439543300006326MarineMVELNHNVVSFNSDTLIKGSHGVLVNVYVSKVGSGS
Ga0068480_140085813300006335MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGSGSNKVEFRNGVDASATPIEFTIFTAIEGNYQNVH
Ga0068480_149849413300006335MarineMVELNHNVVSFNSDTLIKGSHGVLVNVYVSKVGSGSNKVQF
Ga0068480_181673013300006335MarineMVELNHDAVSFNSDTIVKGDHGVIVAVFCTKKGGSGAK
Ga0068502_120125313300006336MarineMVELNHNVVSFNSDTLIKGSHGVLVAVFVTKKGSGSNKVEFRNGTTD
Ga0068502_143804813300006336MarineMVELNHNVVSFNSDTIVKGGHGVVVGVFVTKVGTGSNKVEFRNGTTASDPVEFTIFTAAQGTYLGINRRF
Ga0068502_191928913300006336MarineMVELNHNVVSFNSDTLIKGGHGVLVAVFVTKVGSGSDKVQ
Ga0068482_120153643300006338MarineMVELNHSIVSFNSDTLIKGDHGVIVAVFVTKKGTGSNKVQFRNGTTDSATPIECTIFTAIEGNYQNIH
Ga0068482_158762113300006338MarineMVELNHNVVSFNSDTLIKGNHGVIVGVFVTKVGSGSDKVIFKNGTS*
Ga0068482_193397913300006338MarineMVELNHNVVSFNSDTLIKGGHGVLVAVFVTKVGSGSNKVEFRNGTTASATPIELT
Ga0068481_134235853300006339MarineVELNHNVVSFNSDTIVKGGHGVVVGVSVTKGGSGSNKVEFRNGTTASG
Ga0068481_137971413300006339MarineMVELNHNVVSFNSDTLVKGGHGVVVGVFVTKVGTGSNKVEFRNGTTASDP
Ga0068481_139207843300006339MarineMVELNHNVVSFNSDTLIKGGHGVVVAVFVTKVGSGSNKVDFR
Ga0068503_1027477523300006340MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGTGSNKIEFRNGTTASATPVECTIFTAIEGN
Ga0068503_1031550813300006340MarineMVELNHNVVSLNSDTLIKGGHGVVVAVFVTKVGSG
Ga0068493_1028002713300006341MarineMVELNHNVVSFNSDTLVKGGHGVVVAVFVTKVGRGSNKVDFRNGTSTS
Ga0099695_106517513300006344MarineMVELNHNVVSFNSDTLIKGAHGVIVCVYVSKTGSGSDKVVFKNGTTSSGTAEFTIFTAA
Ga0099957_109352843300006414MarineMVELNHNVVSFNSDTIVKGGHGVVVGVFVTKVGSGSNKV
Ga0098039_116652123300006753MarineMVELNHNVVSFNSDTLIKGDHGVLVSVFVTKVGSGSNKVE
Ga0066376_1070358723300006900MarineMVELNHDVASFNSDTLIKGGHGVLVNVYVTKVGSGSNKVEFRNGTTGTAPIQLTVFTAAQEAYVGIQRAF*
Ga0066372_1102539513300006902MarineMNHNVVSFNSDTLIKGDHGVLVNVYVSKTGSGSDKVEF
Ga0098051_117707113300006924MarineMVEYNHDVISFNADTAIKGNHGVIVSVYVTKTGSSGSKCIFKNGTTTSGTAEFTIFSEQQGTYVGINRRF
Ga0098036_121138423300006929MarineMVEYNHNVVSFNSDTLIKGGHGVIVSVYVSKTGSS
Ga0098064_11827633300006988MarineMVELNHNVVSFNSDTLIKGSHGVLVAVFVTKKGSGSNKIEFRNGTTDSATPIEC
Ga0105668_105761613300007758Background SeawaterMVELNHNVVSFNSDTLIKGGHGVLVNVYITKVGSGSNKVEFRN
Ga0098062_103156623300008051MarineMVELNHNVVSFNSDTLIKGSHGVLVAVFVTKKGSGSNK
Ga0114898_107333823300008216Deep OceanMVELNHSIVSFNSDTLIKGAHGVIVAVFVSKVGSGSDKVVFKNGTSGSGTAEFTIFTAAQ
Ga0114909_115263423300009414Deep OceanMVELNHNVVSFNSDTLIKGGHGVLVNVYVSKVGSGSNKVEF
Ga0105214_11203623300009595Marine OceanicMVELNHDVASFNSDTLIKGGHGVLVNVYITKVGSGSNKVEFRNGT
Ga0171649_11043173300013109MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGSGSNKV
Ga0171650_104737243300013114MarineMVELNHNVVSFNSDTLIKGSHGVLVAVFVTKKGSGSNKIEFRNGTTDSATPIECTIFTA
Ga0171650_112900613300013114MarineMVELNHNIVSFNSDTLIKGNHGVIVGVFVTKVGSGSDKVVFKNGTSGSGTAEFTIF
Ga0181432_108854613300017775SeawaterMVELNHNVVSFNSDTLIKGSHGVLVAVFVTKKGTGSNKVEFRNGVNASATPIE
Ga0181432_111570523300017775SeawaterMVELNHNVVSFNSDTIVKGGHGVVVGVFVTKVGSGSNKVQFRNGTTASDPLEFTIFTAAQGTYLGINR
Ga0181432_115143613300017775SeawaterMVELNHNVVSFNSDTLIKGDHGVVVGVFVTKVGSGSDKVEFRNGTTN
Ga0211602_103006313300020285MarineMVELNHNVVSFNSDTLIKGGHGVVVSVFVTKVGSGS
Ga0211692_104480113300020303MarineMVELNHNVVSFNSDTIIKGDHGVLVSVFVTKVGTGSNKIQFRNG
Ga0211623_1012334623300020399MarineMVELNHNVVSFNSDTLIKGAHGVLVNVYVSKTGSGNNKVEFRNGTTASAPVEFTIFTAAQGTYVGI
Ga0211549_1018883133300020425MarineMVELNHNVVSFNSDTLIKGSHGVIVAVFITKVGSGSDKVVFKNGTTSSGTTEFTLFTA
Ga0211549_1034593713300020425MarineMVELNHNVVSFNSDTLIKGDHGVVVGVFVTKVGSGSNKVEFRNGTTASATPVEFTIFTAAQGTYLGIN
Ga0211639_1028546013300020435MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGSGSNKVEFRNGTTASATP
Ga0211639_1043241023300020435MarineMVELNHNVVSFNSDTLIKGGHGVLVAVFVTKVGSGSNK
Ga0211578_1050425423300020444MarineMVELNHNVVSFNSDTLIKGSHGVIVAVFITKVGSGSDKVVFKNGTTSGGTTEFTLF
Ga0211691_1026616523300020447MarineMVELNHNVVSFNSDTLIKGGHGVLVSVFVTKVGSGSNKVEFRNGVDASATPIE
Ga0211697_1034592413300020458MarineMVELNHNVVSFNSDTLVKGGHGVVVAVFVTKVGSGSNKVDFRNGTST
Ga0206679_1041722223300021089SeawaterMVELNHNVVSFNSDTLIKGSHGVLVAVFVTKKGSGSNKIEFRNGTTASATPIEFTIFTAIEGNY
Ga0206685_1016173413300021442SeawaterMVELNHNVVSFNSDTLIKGAHGVLVNVYVSKTGSGSNKVEFRNGTTASAPVEFTIFTAAQGTYVGIN
Ga0206685_1021403313300021442SeawaterMVELNHNVVSFNSDTLIKGDHGVLVAVFVTKKGTGSNKVEFRNGV
Ga0232635_118729513300021973Hydrothermal Vent FluidsMVELNHNVVSFNSDTLIKGGHGVVVGVFITKLGSGSDKVIFKNGTDASGTAEFTIFTAAQ
(restricted) Ga0255047_1041528333300024520SeawaterMVELNHDVKSFNSDTLIKGSHGVVVAVFVTKVGSGSD
Ga0207902_100152413300025046MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFITKKGSGSNKV
Ga0207892_102074923300025050MarineMVELNHNIVSFNADTLIKGNHGVLVAVFCTKKGSSGAKCQFRNGLDATATPIECTIFGEIEGNY
Ga0208011_109903913300025096MarineMVELNHNVVSFNSDTLIKGAHGVLVNVYVSKTGSGSNKVEFRNGTTASAPVEFTIFTAAQ
Ga0209644_107203213300025125MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGTG
Ga0208919_104651833300025128MarineMVELNHNVANINADGLIKGSHGVVVAVKVMKAGSS
Ga0208336_102114313300025221Deep OceanMVELNHDVVSFNSDTLIKGGHGVLVNVYVTKVGSG
Ga0208571_103531413300025232Deep OceanMVELNHNAVSFNSDTLVKGGHGVIVAVFVTKVGSGSNKVEFRNGTTDSGTVEFTIFT
Ga0208203_103774523300025240Deep OceanMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGSGS
Ga0208335_104417313300025243Deep OceanMVELNHDVVSFNSDTLVKGGHGVLVSVYVTKVGSGSNKVEFKNGT
Ga0208060_101469133300025262Deep OceanMVELNHDVVSFNSDTLVKGGHGVLVSVYVTKVGSGSNKVEFRNGTTGSAPIVFTIFTAAQGTYVGIQRR
Ga0208057_105182513300025275Deep OceanMVELNHDVVSFNSDTLIKGGHGVLVNVYVTKVGSGSNKVEFRNGTTGSAPIVFTIFT
Ga0209362_127992023300025770MarineMVELNHAVKSFNADTIIKGNHGVVVSVYVTKTGSSGSKVVFKNGTTSSGATEFTI
Ga0209757_1008366533300025873MarineMVELNHNVVSFNSDTLIKGSHGVVVGVFVTKVGSGSDKVVFKNGTTSGGTTEFTLFTAT
Ga0208451_100941713300026103Marine OceanicMVELNHNVVSFNSDTLIKGGHGVVVAVFVTKAGSGSNKVEFRNGTTSSATPIEFTIFTASQGTYPNLNRR
Ga0208131_112615113300026213MarineMVELNHSIVSFNSDTLIKGDHGVIVAVFVTKKGTGSNKVQFRNGT
Ga0208764_1047234713300026321MarineMVEYNHNVKSFNADTTIKGSHGVIVSVYVSKTGSSGSKCVFKNGTTSSGTEEFTIFSEQQGTYVGINRR
Ga0256380_107099923300028039SeawaterMVELNHNVVSFNSDTVIKGDHGVVVGVFVTKVGTGSNKVEFRN
Ga0257108_115661623300028190MarineMVELNHNVVSFNSDTLIKGDHGVLVAVFITKKGSGSNKVQFRNGTTDSATPIECTIFTAIEGNYQN
Ga0257108_117425223300028190MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFITKKGTGSNKVEFRNGTTAS
Ga0257111_117596313300028535MarineMVELNHNVVSFNSDTLIKGGHGVLVAVFVTKTGSGSNKVEFRNG
Ga0315328_1035801713300031757SeawaterMVELNHNVVSFNSDTLIKGSHGVLVAVFVTKKGSGSNKIEFRNGTTASAT
Ga0310121_1014299813300031801MarineMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGTGSNKIEFRNGTTA
Ga0310121_1064567023300031801MarineMVELNHNVVSINSDTLIKGSHGVLVNVYVSKVGTGSN
Ga0310120_1033663613300031803MarineMVELNHNVVSFNSDTLIKGGHGVLVAVFVTKVGTGSNKVEFRNG
Ga0310120_1061635813300031803MarineMVELNHNVVSFNSDTLIKGGHGVLVSVFVTKVGSGSN
Ga0315329_1029036513300032048SeawaterMVELNHNVVSFNSDTLIKGNHGVLVAVFVTKKGSGSNKVEFRNGTTA
Ga0310345_1129202413300032278SeawaterMVELNHNVVSFNSDTLIKGGHGVLVAVFVTKVGSGSDKVQFRNGVNAS
Ga0315334_1052660513300032360SeawaterMVELNHNVVSFNSDTLIKGSHGVLVAVFVTKKGSGSNKIEFRNGTTDSAT
Ga0315334_1065178433300032360SeawaterMVELNHNVVSFNSDTLIKGDHGVLVHVYVTKKGSGSNKVE
Ga0315334_1159636523300032360SeawaterMVELNHNVVSFNSDTLIKGDHGVLVHVYVTKKGSGSNKV


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