Metagenome / Metatranscriptome Family F091973

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F091973
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	117 residues
Representative Sequence	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQK
Number of Associated Samples	76
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	92.52 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (95.327 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater (31.776 % of family members)
Environment Ontology (ENVO)	Unclassified (31.776 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (43.925 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.12% β-sheet: 0.00% Coil/Unstructured: 40.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00535	Glycos_transf_2	42.99
PF00583	Acetyltransf_1	2.80
PF02698	DUF218	0.93

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.93
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
All Organisms	root	All Organisms	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
cellular organisms	root	All Organisms → cellular organisms	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.33 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002133\|S2T7BSa_1518457	Not Available	1261	Open in IMG/M
3300002139\|M3t2BS2_1250164	Not Available	779	Open in IMG/M
3300002408\|B570J29032_109266262	Not Available	662	Open in IMG/M
3300002835\|B570J40625_101665219	Not Available	520	Open in IMG/M
3300006030\|Ga0075470_10120023	Not Available	778	Open in IMG/M
3300006637\|Ga0075461_10058257	Not Available	1245	Open in IMG/M
3300006637\|Ga0075461_10092817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	952	Open in IMG/M
3300006637\|Ga0075461_10192194	Not Available	613	Open in IMG/M
3300006875\|Ga0075473_10437055	Not Available	528	Open in IMG/M
3300007094\|Ga0102532_1173174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1432	Open in IMG/M
3300007214\|Ga0103959_1293154	Not Available	1395	Open in IMG/M
3300007234\|Ga0075460_10272891	Not Available	559	Open in IMG/M
3300007363\|Ga0075458_10043529	Not Available	1416	Open in IMG/M
3300007544\|Ga0102861_1068395	Not Available	932	Open in IMG/M
3300007544\|Ga0102861_1081416	Not Available	856	Open in IMG/M
3300007603\|Ga0102921_1156404	Not Available	824	Open in IMG/M
3300007622\|Ga0102863_1037742	Not Available	1397	Open in IMG/M
3300007972\|Ga0105745_1316763	Not Available	512	Open in IMG/M
3300007974\|Ga0105747_1202135	Not Available	655	Open in IMG/M
3300007992\|Ga0105748_10435953	Not Available	568	Open in IMG/M
3300008055\|Ga0108970_11361264	Not Available	560	Open in IMG/M
3300008055\|Ga0108970_11746116	Not Available	538	Open in IMG/M
3300009051\|Ga0102864_1108079	Not Available	759	Open in IMG/M
3300010318\|Ga0136656_1091676	Not Available	1070	Open in IMG/M
3300010354\|Ga0129333_10252363	Not Available	1589	Open in IMG/M
3300010354\|Ga0129333_10403583	Not Available	1209	Open in IMG/M
3300010354\|Ga0129333_10857827	Not Available	771	Open in IMG/M
3300010354\|Ga0129333_10982581	Not Available	710	Open in IMG/M
3300010354\|Ga0129333_11473794	Not Available	558	Open in IMG/M
3300010370\|Ga0129336_10534458	Not Available	630	Open in IMG/M
3300010370\|Ga0129336_10600334	Not Available	587	Open in IMG/M
3300010370\|Ga0129336_10790099	Not Available	500	Open in IMG/M
3300012970\|Ga0129338_1026698	Not Available	549	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10502584	Not Available	738	Open in IMG/M
3300021961\|Ga0222714_10043686	Not Available	3179	Open in IMG/M
3300021961\|Ga0222714_10079586	Not Available	2141	Open in IMG/M
3300021961\|Ga0222714_10161426	Not Available	1332	Open in IMG/M
3300021961\|Ga0222714_10523844	Not Available	604	Open in IMG/M
3300021961\|Ga0222714_10680458	Not Available	504	Open in IMG/M
3300021962\|Ga0222713_10118722	Not Available	1866	Open in IMG/M
3300021962\|Ga0222713_10138937	Not Available	1691	Open in IMG/M
3300021962\|Ga0222713_10161394	Not Available	1535	Open in IMG/M
3300021962\|Ga0222713_10330889	Not Available	959	Open in IMG/M
3300021962\|Ga0222713_10589095	Not Available	650	Open in IMG/M
3300021962\|Ga0222713_10676967	Not Available	591	Open in IMG/M
3300021962\|Ga0222713_10768808	Not Available	541	Open in IMG/M
3300022752\|Ga0214917_10025872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4591	Open in IMG/M
3300023174\|Ga0214921_10414429	Not Available	681	Open in IMG/M
3300023179\|Ga0214923_10610758	Not Available	514	Open in IMG/M
3300023184\|Ga0214919_10013839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9704	Open in IMG/M
3300024276\|Ga0255205_1013904	Not Available	1370	Open in IMG/M
3300024280\|Ga0255209_1023719	Not Available	973	Open in IMG/M
3300024307\|Ga0255221_1026685	Not Available	735	Open in IMG/M
3300024312\|Ga0255219_1012787	Not Available	1623	Open in IMG/M
3300024490\|Ga0255185_1008341	Not Available	1496	Open in IMG/M
3300024491\|Ga0255203_1003627	Not Available	2436	Open in IMG/M
3300024492\|Ga0255189_1012981	Not Available	1140	Open in IMG/M
3300024494\|Ga0255194_1048096	Not Available	612	Open in IMG/M
3300024498\|Ga0255199_1022977	Not Available	897	Open in IMG/M
3300024501\|Ga0255208_1015167	Not Available	1309	Open in IMG/M
3300024510\|Ga0255187_1009852	Not Available	1363	Open in IMG/M
3300024532\|Ga0256352_1067344	Not Available	641	Open in IMG/M
3300024534\|Ga0256357_1051353	Not Available	802	Open in IMG/M
3300024543\|Ga0256348_1036549	Not Available	828	Open in IMG/M
3300024852\|Ga0255295_1057712	Not Available	749	Open in IMG/M
3300024852\|Ga0255295_1100214	Not Available	556	Open in IMG/M
3300025635\|Ga0208147_1120890	Not Available	625	Open in IMG/M
3300025732\|Ga0208784_1156336	Not Available	673	Open in IMG/M
3300025732\|Ga0208784_1204983	Not Available	574	Open in IMG/M
3300025732\|Ga0208784_1223683	Not Available	545	Open in IMG/M
3300025818\|Ga0208542_1194455	Not Available	527	Open in IMG/M
3300025848\|Ga0208005_1248377	Not Available	549	Open in IMG/M
3300025872\|Ga0208783_10141805	Not Available	1026	Open in IMG/M
3300026563\|Ga0256355_1103702	Not Available	504	Open in IMG/M
3300027153\|Ga0255083_1045317	Not Available	884	Open in IMG/M
3300027157\|Ga0255204_1066473	Not Available	646	Open in IMG/M
3300027160\|Ga0255198_1022226	Not Available	1207	Open in IMG/M
3300027160\|Ga0255198_1064779	Not Available	635	Open in IMG/M
3300027162\|Ga0255212_1090151	Not Available	518	Open in IMG/M
3300027538\|Ga0255085_1035632	Not Available	1119	Open in IMG/M
3300027627\|Ga0208942_1026641	Not Available	1851	Open in IMG/M
3300027697\|Ga0209033_1011143	All Organisms → cellular organisms → Bacteria	3973	Open in IMG/M
3300027769\|Ga0209770_10337128	Not Available	568	Open in IMG/M
3300027804\|Ga0209358_10214702	Not Available	987	Open in IMG/M
3300028066\|Ga0255200_1051440	Not Available	588	Open in IMG/M
3300028067\|Ga0255192_1016346	Not Available	1139	Open in IMG/M
3300028067\|Ga0255192_1016671	Not Available	1126	Open in IMG/M
3300028071\|Ga0255216_1032678	Not Available	780	Open in IMG/M
3300028071\|Ga0255216_1057526	Not Available	537	Open in IMG/M
3300028083\|Ga0255190_1018165	Not Available	1182	Open in IMG/M
3300028083\|Ga0255190_1022164	Not Available	1055	Open in IMG/M
3300028086\|Ga0255201_1042781	Not Available	711	Open in IMG/M
3300028265\|Ga0255197_1006260	Not Available	1829	Open in IMG/M
3300028267\|Ga0256358_1044196	Not Available	880	Open in IMG/M
3300028269\|Ga0255193_1045613	Not Available	602	Open in IMG/M
3300033978\|Ga0334977_0323612	Not Available	736	Open in IMG/M
3300033978\|Ga0334977_0402990	Not Available	638	Open in IMG/M
3300034021\|Ga0335004_0327450	Not Available	894	Open in IMG/M
3300034021\|Ga0335004_0359468	Not Available	838	Open in IMG/M
3300034023\|Ga0335021_0426212	Not Available	687	Open in IMG/M
3300034105\|Ga0335035_0184748	Not Available	1293	Open in IMG/M
3300034117\|Ga0335033_0586651	Not Available	521	Open in IMG/M
3300034120\|Ga0335056_0073990	Not Available	2153	Open in IMG/M
3300034120\|Ga0335056_0148279	Not Available	1396	Open in IMG/M
3300034122\|Ga0335060_0542217	Not Available	593	Open in IMG/M
3300034355\|Ga0335039_0524987	Not Available	589	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.13%
Host-Associated	Host-Associated	1.87%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.13%
Plants	Host-Associated → Plants	1.87%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	55.14%
Marine	Environmental → Aquatic → Marine	41.12%
Unclassified	Environmental → Aquatic → Unclassified	1.87%
Leaf	Host-Associated → Plants → Leaf	1.87%

Habitat	Taxonomy	Distribution
River	Environmental → Aquatic → Freshwater → River	31.78%
Coastal	Environmental → Aquatic → Marine → Coastal	25.23%
Lake	Environmental → Aquatic → Freshwater → Lake	16.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified	11.21%
Lentic	Environmental → Aquatic → Freshwater → Lentic	6.54%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.67%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.87%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	31.78%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	25.23%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	16.82%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	11.21%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	5.61%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	4.67%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.87%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.87%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.93%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	31.78%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	14.95%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	14.02%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	11.21%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	8.41%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	4.67%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.80%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.87%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.87%
Marine	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine	1.87%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.87%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	0.93%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.93%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002133	Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - S2T7BSa (116f)	Environmental	Open in IMG/M
3300002139	M3t2BS2 (117f)	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007094	Freshwater lake microbial communities from Singapore - a non-axenic Oscillatoriales culture (M13A)	Environmental	Open in IMG/M
3300007214	Combined Assembly of cyanobacterial bloom in Punggol water reservoir, Singapore (Diel cycle-Surface layer) 9 sequencing projects	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007544	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300007972	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300012970	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024276	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_8d	Environmental	Open in IMG/M
3300024280	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepC_8d	Environmental	Open in IMG/M
3300024307	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8d	Environmental	Open in IMG/M
3300024312	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepA_8d	Environmental	Open in IMG/M
3300024490	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepB_0h	Environmental	Open in IMG/M
3300024491	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8h	Environmental	Open in IMG/M
3300024492	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_8h	Environmental	Open in IMG/M
3300024494	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepB_8h	Environmental	Open in IMG/M
3300024498	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepA_8h	Environmental	Open in IMG/M
3300024501	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepB_8d	Environmental	Open in IMG/M
3300024510	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_8h	Environmental	Open in IMG/M
3300024532	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024534	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024543	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepA_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024852	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025818	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025848	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026563	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027153	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepC_8h	Environmental	Open in IMG/M
3300027157	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8h	Environmental	Open in IMG/M
3300027160	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Law_RepC_8h	Environmental	Open in IMG/M
3300027162	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepC_8d	Environmental	Open in IMG/M
3300027538	Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8d	Environmental	Open in IMG/M
3300027627	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)	Environmental	Open in IMG/M
3300027697	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)	Environmental	Open in IMG/M
3300027769	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300028066	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepB_8h	Environmental	Open in IMG/M
3300028067	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepC_8h	Environmental	Open in IMG/M
3300028071	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepA_8d	Environmental	Open in IMG/M
3300028083	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8h	Environmental	Open in IMG/M
3300028086	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Atlam_RepC_8h	Environmental	Open in IMG/M
3300028265	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Law_RepB_8h	Environmental	Open in IMG/M
3300028267	Metatranscriptome of freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028269	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Yuk_RepA_8h	Environmental	Open in IMG/M
3300033978	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME28Sep2014-rr0002	Environmental	Open in IMG/M
3300034021	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME01Oct2014-rr0057	Environmental	Open in IMG/M
3300034023	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Oct2016-rr0090	Environmental	Open in IMG/M
3300034105	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15May2014-rr0127	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034122	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
S2T7BSa_15184573	3300002133	Marine	MRSLIDPVWFLLLFLTFAIFVKVANTKLNRVIKLLTRVSISILVFLSTGVATLIFDQILATETSPKSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSLVVFSG
M3t2BS2_12501641	3300002139	Marine	MRSLIDPVWFLLLFLTFAIFVKVANTKLNRVIKLLTRVSISILVFLSTGVATLIFDQILATETSPKSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRINAASTLW
B570J29032_1092662621	3300002408	Freshwater	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTSVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYL
B570J29032_1093664001	3300002408	Freshwater	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVIKLLTRISISILFFLSTGIATLVFDQILATETSPNSDSSPEFIFVLGGGY
B570J40625_1016652191	3300002835	Freshwater	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLARASISILFFLSTGVATVIFDQILANETSPGPDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQKYPKSTVVFSGNQPGTEEDREPTRHGELA
Ga0075470_101200232	3300006030	Aqueous	MRSLVDPVWFLLLVLTLTIFAKVESTRVNRAIKLLARVSISILFFLSTGVATLIFDQILANETSPGPDWSPEFIFVLGGGYELGANNAQDFLGTESI
Ga0075461_100582571	3300006637	Aqueous	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVVKLLTRISISILFFLSTGIATTVFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPK
Ga0075461_100928171	3300006637	Aqueous	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVIKLLTRASISILFFLSTGVATLIFDQILATEASPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVN
Ga0075461_101921941	3300006637	Aqueous	MRSLIDPVWFLLLVLTLTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILATETSPGPDWSPEFIFVLGGGYELGANN
Ga0075473_104370551	3300006875	Aqueous	MRSLVDPVWFLLLVLTLTIFAKVESTRVNRAIKLLARVSISILFFLSTGVATLIFDQILANETSPGPDWSPEFIFVLGGGYELGANNAQDFLGTESIRRV
Ga0102532_11731741	3300007094	Freshwater Lake	MRSLIDPVWFLLLVLTFAIFVKVANTKLSRVVKLLARVSISTLVFLSTGVATLIFDQFLANETSPGSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASVLWQKYPKSIVVFSGKQPGTETERAATRHGELSSEHAMSLGLTESRIIIESTS
Ga0103959_12931541	3300007214	Freshwater Lake	MRSLIDPVWFLLLVLTFAIFVTVASTKLSRVVKLLARVSISTLVFLSTGVATLIFDQLLATETSPGPDWSPEFIFILGGGYELGANAAQDFLGTESI
Ga0075460_102728911	3300007234	Aqueous	MRSLIDPVWFLLLVLTLTTFVTVASTKLGRIVKLLTRVSISILVFLSTGIATLIFDQILANETSPGPDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVN
Ga0075458_100435293	3300007363	Aqueous	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVVKLLTRISISILFFLSTGIATTVFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPKSRVVFSGNQPGTEEDREPTRHGELAAEHAIS
Ga0102861_10683952	3300007544	Estuarine	MRSLVDPVWILLLVLTFAIFVKVKSARVNRAIKLIARVSISILFFLSTGVATLIFDQILANESLPGPDWSPEFVFVLGGGYEIGANVAQDFLGTESIRRVNAASALWQKYPSSKIVF
Ga0102861_10814161	3300007544	Estuarine	MRSLIDPVWFLLLFLTFAIFVTVANTKLNRVIKLLTRVSISILVFLSTGVATLIFDQILATETSPGSDWTPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPESIVVFSGKQPGTETERAATRHGELSSKHAITL
Ga0102921_11564042	3300007603	Estuarine	MVVFAKFKNNRIDRAVKLVGRISIAMLVFLSTGVATFIFDKALATETSPKNEWSPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAAALWQQYP
Ga0102863_10377421	3300007622	Estuarine	MRSLIDPVWFLLLVLTLTIFAKVEGTRVNRAIKLLARASISMLLFLSTGVATVIFDQILANETSPGPNWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQKYPKSMVVFSGRQPGTETERAATRHGELSSEHAISLGLT
Ga0105745_13167631	3300007972	Estuary Water	MRSLIDPVWFLLLFLTFAIFVTVANTKLNRVIKLLTRVSISILVFLSTGIATLIFDQILANETSPGPDWSPEFIFILGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSVVVFSGKQPGTETVRAATRLGELSSD
Ga0105747_12021351	3300007974	Estuary Water	MRSLIDPVWFLLLFLTFAIFVTVANTKLNRVIKLLARVSISILVFLSTGIATLIFDQILATETSPGSGWSPEFIFVLGGGYELGANAAQDFLGTESVRRVNAAS
Ga0105748_104359531	3300007992	Estuary Water	MRSLIDPVWFLLFVLTLTTFVTVASTKLGRIVKLLTRVSISILVFLSTGIATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVN
Ga0108970_113612642	3300008055	Estuary	MRSLIDPVWFLLLVLTFAIFVTVANTKLSRVIKLLARVSISILVFLSTGVATLIFDQFLANETSPGPDWSPEFIVILGGGYELGANAAQDFLGT
Ga0108970_117461161	3300008055	Estuary	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRAIKLLARASISILFFLSTGVATLVFDQILSTETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQKYPKSTVVFSGNQPGTEEDREPTRHGDLAAEHAQSLGLDK
Ga0102864_11080791	3300009051	Estuarine	MRSLIDPVWILLFVLMFTIFAKVESTRVNRVIKLLARVSISILFFLSTGVATLVFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASALW
Ga0136656_10916761	3300010318	Freshwater To Marine Saline Gradient	MRSLIDPVWFLLLFLTFAIFVKVANTKLNRVIKLLTRVSISTLVFLSTGVATLIFDQILATETSPKSDWSPEFIFVLGGGYELGANATQDFLGTESIRRVNAASALWQKYPK
Ga0129333_102523631	3300010354	Freshwater To Marine Saline Gradient	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVVKLLTRISISILFFLSTGIATTVFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGT
Ga0129333_104035833	3300010354	Freshwater To Marine Saline Gradient	MRSLIDPVWFLLLVLMLTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILANETSPGPNWSPEFIFVLGGGYELGANNAQDFLGT
Ga0129333_108578271	3300010354	Freshwater To Marine Saline Gradient	MRSLVDPVWILLLVLTFTIFAKVKSTRVNRVIKLLARASISILFFLSTDVATVIFDQILANETSPSPDWSPEFIFVLGGGYELGVNNAQDFLGTESIRRVNAAQALWQKYPKSTVVFSGNQPGTEEDREPTRHGEL
Ga0129333_109825811	3300010354	Freshwater To Marine Saline Gradient	MRSLIDPVWFLLFVLTFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDRELTRHGELSSEHAQS
Ga0129333_114737941	3300010354	Freshwater To Marine Saline Gradient	MRSLIDPVWFLLLVLTFAIFVAVANTKLNRVIKLLARVSISILVFLSTGVATLIFDRILANETSPDPDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSLVVFSGRQPGTENDREPTRHG
Ga0129336_105344582	3300010370	Freshwater To Marine Saline Gradient	MRSLVDPVWILLLVLTFTIFAKFEIARINRVIKLLTRVSISILIFLSTGVATLIFNQILTTETSPNSDWSPEFIFVLGGGYEPGANNAQDFLG
Ga0129336_106003342	3300010370	Freshwater To Marine Saline Gradient	MRSLIDPVWFLLLVLTFAIFVTVASTKLSRVVKLLARVSISILVFLSTGVATLIFDQFLATETSPRSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSMIVFSGK
Ga0129336_107900991	3300010370	Freshwater To Marine Saline Gradient	MRSLIDPVWFLLIVLTLTTFVTVASTKLGRIVKLLTRVSILILVFLSTGIATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVN
Ga0129338_10266981	3300012970	Aqueous	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTES
(restricted) Ga0172373_105025842	3300013131	Freshwater	MRSLIDPVWFLLLFLTFAIFVKVANTKLNRIIKLLNRVSISILVFLSTGVAALIFDQILATETSPRSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRINAASALWQKYPKSMVVFSGRQPGTETERAKTRHGELSYQ
Ga0222714_100436861	3300021961	Estuarine Water	MRSLIDPVWFLLLVLTLTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILATETSPNSDWSPEFIFVLGGGYELGANNTQDFLGTESI
Ga0222714_100795863	3300021961	Estuarine Water	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVIKLLTRASISILFFLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFPGT
Ga0222714_101614263	3300021961	Estuarine Water	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVIKLLTRISISILLFLSTGVATLIFNQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPK
Ga0222714_105238442	3300021961	Estuarine Water	MRSLIDPVWFLLLVLTLTTFVTVANTKLSRVIKLLARVSISMLVFLSTGIATLIFDQILATETSPWSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSMVVFSGRQPGTETERAATRH
Ga0222714_106804581	3300021961	Estuarine Water	MRSLIDPVWFLLLVLTLTNFVTVANTKLGRVVKLLARVSVSTLVFLSTGVATLIFDQFLATETSPESDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASAIWQKYPESIVVFSGKQPGTETKRAATRHGELSSEHALSLGLDKIR
Ga0222713_101187221	3300021962	Estuarine Water	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGT
Ga0222713_101389373	3300021962	Estuarine Water	MRSLVDPVWILLLVLTFAIFVKVESARVNRVIKLLARVSISILFFLSTGVATLVFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVNAASALWQKYPKSTVVFSGNQPGT
Ga0222713_101613943	3300021962	Estuarine Water	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVVKLLTRVSISILFFLSTGIATTVFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESI
Ga0222713_103308892	3300021962	Estuarine Water	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVIKLLTRASISILFFLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESI
Ga0222713_105890952	3300021962	Estuarine Water	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLTRVSLSMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGT
Ga0222713_106769672	3300021962	Estuarine Water	MRSLIDPVWFLLLFLTFAIFVKVASTKLDRVVKLLARVSISILVFLSTGVATLIFDQFLATETSPTSEWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSMIVFSGKQPGTEDDRKPTRHGELSSEH
Ga0222713_107688081	3300021962	Estuarine Water	MRSLIDPVWFLLLVLTFAIFVTVANTKLGRVIKLLARVNISILVFLSTGVTTLIFDQFLATETSPKSEWSPEFIFVLGGGYELGANVAQDFLGTESIRRVNSASAIWQKYPKSLVVFSGKQPGTENDREPTRHGELSSEHAIS
Ga0214917_100258725	3300022752	Freshwater	MRSLVDPTWLLVIALTMVVFAKFKNNRIDRAVKLVGRVSIAVLVFLSTGIATLIFDKVLATETSPKDDWSPEFIFVLGGGYELGANPAQDFLGTESIRRVNS
Ga0214921_104144292	3300023174	Freshwater	MRSLIDPVWFLLLVLTLTTFVTVASTKLGRVVKLLARVSVSILVFLSTGVATLIFEQFLATETSPGSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSMVVFSGRQPGTETERAATRHGELSSEHAISLGLTESRIII
Ga0214923_106107581	3300023179	Freshwater	MRSLVDPVWILLLALTFAIFVKVKNTRVNRVIKLLARVSISMLLFLSTGLATLIFDAVLSTESSPDASWSPEFIFVLGGGYELGANSAQDFLGTESIRRVNAASALW
Ga0214919_100138399	3300023184	Freshwater	MRSLIDPVWLLLFALTLAMFVEFQNLRLKRVVKLLARVSVVSLLFMSSGVATLIFDKFLATETTPEAGWSPEFIFVLGGGYELGANNAQDFLGTESIR
Ga0255205_10139041	3300024276	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVNAASALWQKYPSSKIVFS
Ga0255209_10237191	3300024280	Freshwater	MRSLIDPVWFLLLVLMLTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILANETSPGPNWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQAL
Ga0255221_10266851	3300024307	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYEL
Ga0255219_10127873	3300024312	Freshwater	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAA
Ga0255185_10083411	3300024490	Freshwater	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYEL
Ga0255203_10036271	3300024491	Freshwater	MRSLVDPTWLLVIALTMVFFANFKNNRIDRAVKLVGRVSLVMLVFLSTGVATFIFDKALATQSSPKSEWSPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAAAIWQQYPSSIVVFSGGQPGTAGLRDASRHGELSSKHAISLGLT
Ga0255189_10129811	3300024492	Freshwater	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGT
Ga0255194_10480961	3300024494	Freshwater	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDRELTRHGELSSEHAQS
Ga0255199_10229772	3300024498	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDR
Ga0255208_10151673	3300024501	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILANETSPGPNWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQK
Ga0255187_10098523	3300024510	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASVLWQKYPKSRVVFSGNQPGTEEDREPTR
Ga0256352_10673442	3300024532	Freshwater	MRSLIDPVWFLLFVLTFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVNAASALWQKYPSS
Ga0256357_10513532	3300024534	Freshwater	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAAS
Ga0256348_10365492	3300024543	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNTQDFLGTESIRRVNAASALWQKYPSSQVVFSGRQPGTEVDREPTRHGELAAEHAISL
Ga0255295_10577122	3300024852	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASVLWQKYPKSRVVFSGNQPGTEEDR
Ga0255295_11002142	3300024852	Freshwater	MRSLIDPVWFLLLVLTFAIFVTVANTKLNRVIKLLARVSISILVFLSTGVATLIFDQFLATETSPGSDWSPEFILVLGGRYELGANAAQDFLGTESIRR
Ga0208147_11208901	3300025635	Aqueous	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDRELTRHGELSSEHAQSLGLDKARI
Ga0208784_11563361	3300025732	Aqueous	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDREL
Ga0208784_12049832	3300025732	Aqueous	MRSLVDPVWFLLLVLTLTIFAKVESTRVNRAIKLLARVSISILFFLSTGVATLIFDQILANETSPGPDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASVLWQ
Ga0208784_12236831	3300025732	Aqueous	MRSLIDPVWFLLLVLMLTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILANETSPGPNWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQKYPKSTVVFSGN
Ga0208542_11944551	3300025818	Aqueous	MRSLIDPVWILLLVLTFTIFVKVKSARVNRVVKLLTRISISILFFLSTGIATTVFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPKSRVVFSGNQPGTEEDREPTRHGELA
Ga0208005_12483772	3300025848	Aqueous	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQK
Ga0208783_101418051	3300025872	Aqueous	MRSLIDPVWFLLLVLMLTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILANETSPGPNWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQKYPSSKI
Ga0256355_11037022	3300026563	Freshwater	MRSLIDPVWFLLLVLTLTTFVTVASTKLGRIVKLLTRVSILILVFLSTGIATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRV
Ga0255083_10453171	3300027153	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNSASALWQKYPK
Ga0255204_10664732	3300027157	Freshwater	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVIKLLTRISISILFFLSTGIATLVFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRV
Ga0255198_10222263	3300027160	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNTQDFLGTESIRRVNAASALWQKYPSSQVVFSGRQPG
Ga0255198_10647791	3300027160	Freshwater	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDRE
Ga0255212_10901511	3300027162	Freshwater	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGT
Ga0255085_10356321	3300027538	Freshwater	MRSLIDPVWFLLLVLTLTIFAKVEGTRVNRAIKLLARASISILFFLSTGVATVIFDQILANETSPGPDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQKYPKSTVVFSGNQPGTEEDREPTRHGELAAEHAQSLG
Ga0208942_10266413	3300027627	Freshwater Lentic	MRSLIDPVWLLLIVLLIAIFTKFSNSKVDRAFRLLARASISLLFFLSTGVATLLFDEILATKTAPELDWSPEYIFVLGGGYELGANEAQDFLGTESIRRVNAASSLWQKYPT
Ga0209033_10111431	3300027697	Freshwater Lake	MRSLVDPVWILLLVLTFTVFAKVESTRVNRVIKLLTRVSMSMLLFLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNTQDFL
Ga0209770_103371282	3300027769	Freshwater Lake	MRSLIDPVWFLLLVLTFAIFVTVANTKLSRVIKLLARVSISMLVILSTGVATLTFDQILATETSAGTDWSPEFIFVLGGGYELGANAAQDFLGTESV
Ga0209358_102147021	3300027804	Freshwater Lake	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYLSSKIVFSGRQPGTESDRELTRHGELSSEHAQSLGLDKARI
Ga0255200_10514401	3300028066	Freshwater	MRSLIDPVWFLLLVLMLTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILANETSPGPNWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQK
Ga0255192_10163462	3300028067	Freshwater	MRSLIDPVWFLLLVLTFAIFVTVANTKLNRVIKLLARVSISILVFLSTGVATLIFDRILANETSPDPDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSLVVFSGRQPGTENDREPTRHGELSSEHAMSLGLTESRII
Ga0255192_10166712	3300028067	Freshwater	MRSLIDPVWFLLLVLTLTIFAKVESTRVNRAIKLLARASISMLLFLSTGVATVIFDQILANETSPGPNWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAAQALWQK
Ga0255216_10326782	3300028071	Freshwater	MRSLVDPTWLLVIALTMVFFANFKNNRIDRAVKLVGRVSLIMLVFLSTGVATFIFDKALATESSPKSEWSPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAATIWQQY
Ga0255216_10575262	3300028071	Freshwater	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAAQAL
Ga0255190_10181652	3300028083	Freshwater	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDRELTRHG
Ga0255190_10221642	3300028083	Freshwater	MRSLIDPVWFLLFVLIFTIFAKVESTRVNRVIKLLARVSISILFVLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGAINAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDRE
Ga0255201_10427811	3300028086	Freshwater	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDRELTR
Ga0255197_10062601	3300028265	Freshwater	MRSLIDPVWFLLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPSSKIVFS
Ga0256358_10441961	3300028267	Freshwater	MRSLVDPTWLLVIALTMVFFANFKNNRIDRAVKLVGRVSLAMLVFLSTGVATFIFDKALATESSPKSEWSPEFIFVLVGGYELGANEAQDFLGTESIRRVNAAAAIWQQYPSSIVVFSGGQPDTAGLRDASRHGELSSKHAISLGLT
Ga0255193_10456131	3300028269	Freshwater	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTGVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPSSKIVFSGRQPGTENDRELTRHGELSSE
Ga0334977_0323612_416_736	3300033978	Freshwater	MVVFAKFKNNRIDRAVKLVGRVSIAMLVFLSTGVATFIFDKALATETSPKNEWSPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAAALWQQYPLSIVVFSGGQPG
Ga0334977_0402990_210_638	3300033978	Freshwater	MRSLVDPVWILLLVLTFTIFAKVESTRVNRVIKLLTRVSISMLLFLSTSVATLIFDQILATETSPNSDWSPKFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYLSSKIVFSGRQPGTENDRELTRHGELSSEHAQS
Ga0335004_0327450_2_352	3300034021	Freshwater	MVIFAKFKNNRIDRAVKLVGRISIAMLVFLSTGVATFIFDKALATETSPKSEWSPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAAALWQQYPLSIVVFSGGQPGTAGLRDAKRH
Ga0335004_0359468_487_837	3300034021	Freshwater	MVVFAKFKNNRIDRAVKLVGRVSIAMLVFLSTGVATFIFDKALATETSPKNEWSPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAAALWQQYPLSIVVFSGGQPGTAGLRDAKRH
Ga0335021_0426212_301_687	3300034023	Freshwater	MRSLVDPVWILLLVLTFTVFAKVESTRVNRFIKLLTRVSMSMLLFLSTGVATLIFDQILATETSPNSDWSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPKSRVVFSGNQPGTEEDRE
Ga0335035_0184748_1_462	3300034105	Freshwater	MRSLIDPVWFLLLVLTFAIFVAVANTKLNRVIKLLARVSISILVFLSTGVATLIFDRILANETSPGPDWSPEFIFILGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSLVVFSGRQPGTENDREPTRHGELSSEHAMSLGLTESRVIIE
Ga0335033_0586651_2_391	3300034117	Freshwater	MRSLVDPTWLLVIALTMVVFAKFKNNRIDRVVKLVGRVSIAMLVFLSTGVVTFIFDKALATESSPKSEWTPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAAALWQQYPSSIVVFSGGQPGTAGLRDA
Ga0335056_0073990_3_416	3300034120	Freshwater	MRSLIDPVWFLLLVLTFAIFVAVANTKLNRVIKLLARVSISILVFLSTGVATLIFDRILANETSPGPDWSPEFIFILGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSLVVFSGRQPGTENDREPTRHGELSS
Ga0335056_0148279_1119_1394	3300034120	Freshwater	MVIFAKFKNNRIDRAVKLVGRISIAMLVFLSTGVATFIFDKVLATETSPKNEWSPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAAALWQ
Ga0335060_0542217_179_592	3300034122	Freshwater	MRSLVDPVWILLLVLTFAIFVKVKSARVNRVIKLLTRISISILFFLSTGIATLVFDQILATETSPNSDSSPEFIFVLGGGYELGANNAQDFLGTESIRRVNAASALWQKYPKSLVVFSGRQPGTENDREPTRHGELSS
Ga0335039_0524987_1_321	3300034355	Freshwater	MVVFAKFKNKRIDRAVKLVGRISIAMLVFLSTGVATFIFDKALATETLPKSEWSPEFIFVLGGGYELGANEAQDFLGTESIRRVNAAAALWQQYPLSIVVFSGGQPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters