NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300002133

3300002133: Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - S2T7BSa (116f)



Overview

Basic Information
IMG/M Taxon OID3300002133 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0110182 | Gp0072426 | Ga0016768
Sample NameMarine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - S2T7BSa (116f)
Sequencing StatusPermanent Draft
Sequencing Center
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size168471753
Sequencing Scaffolds39
Novel Protein Genes41
Associated Families39

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon3
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.1
Not Available12
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D181
All Organisms → Viruses → Predicted Viral8
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata1
All Organisms → Viruses1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Bellamyvirus sp.1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1
All Organisms → cellular organisms → Bacteria2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → Podoviridae sp. ctrTa161
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I211
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameMarine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationBaltic Sea
CoordinatesLat. (o)57.305Long. (o)20.0745Alt. (m)N/ADepth (m)1
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F001881Metagenome / Metatranscriptome622Y
F001968Metagenome / Metatranscriptome610Y
F002092Metagenome / Metatranscriptome594Y
F002303Metagenome / Metatranscriptome573Y
F007054Metagenome / Metatranscriptome359Y
F007973Metagenome / Metatranscriptome341Y
F009073Metagenome / Metatranscriptome323Y
F009839Metagenome / Metatranscriptome312N
F011355Metagenome / Metatranscriptome292N
F012107Metagenome / Metatranscriptome283Y
F015024Metagenome / Metatranscriptome258N
F015080Metagenome / Metatranscriptome257Y
F016995Metagenome243Y
F020114Metagenome / Metatranscriptome226Y
F023097Metagenome / Metatranscriptome211Y
F023138Metagenome / Metatranscriptome211Y
F023494Metagenome / Metatranscriptome210Y
F024724Metagenome / Metatranscriptome204Y
F028525Metagenome / Metatranscriptome191Y
F029603Metagenome / Metatranscriptome188N
F031070Metagenome / Metatranscriptome183Y
F036668Metagenome / Metatranscriptome169Y
F036986Metagenome / Metatranscriptome169Y
F041158Metagenome / Metatranscriptome160Y
F044824Metagenome / Metatranscriptome154N
F048940Metagenome / Metatranscriptome147Y
F049578Metagenome / Metatranscriptome146Y
F049641Metagenome146N
F055670Metagenome / Metatranscriptome138N
F066743Metagenome / Metatranscriptome126Y
F068814Metagenome124Y
F072108Metagenome / Metatranscriptome121N
F074884Metagenome / Metatranscriptome119N
F075742Metagenome118Y
F075980Metagenome118Y
F085375Metagenome / Metatranscriptome111Y
F088307Metagenome / Metatranscriptome109N
F091973Metagenome / Metatranscriptome107Y
F093414Metagenome / Metatranscriptome106N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
S2T7BSa_1002674All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon664Open in IMG/M
S2T7BSa_1018061All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae6037Open in IMG/M
S2T7BSa_1037546All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.547Open in IMG/M
S2T7BSa_1043056Not Available1164Open in IMG/M
S2T7BSa_1055043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA023-D1812141Open in IMG/M
S2T7BSa_1077923All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon640Open in IMG/M
S2T7BSa_1094531Not Available709Open in IMG/M
S2T7BSa_1142951All Organisms → Viruses → Predicted Viral1054Open in IMG/M
S2T7BSa_1149624All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique42951Open in IMG/M
S2T7BSa_1167588All Organisms → Viruses → Predicted Viral2199Open in IMG/M
S2T7BSa_1190242All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes1776Open in IMG/M
S2T7BSa_1273039All Organisms → Viruses → Predicted Viral1266Open in IMG/M
S2T7BSa_1296680Not Available730Open in IMG/M
S2T7BSa_1328526All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata513Open in IMG/M
S2T7BSa_1348593All Organisms → Viruses913Open in IMG/M
S2T7BSa_1367828Not Available721Open in IMG/M
S2T7BSa_1393045All Organisms → Viruses → Predicted Viral1315Open in IMG/M
S2T7BSa_1398517All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Bellamyvirus → unclassified Bellamyvirus → Bellamyvirus sp.867Open in IMG/M
S2T7BSa_1417017Not Available505Open in IMG/M
S2T7BSa_1421055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia13242Open in IMG/M
S2T7BSa_1466864All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon704Open in IMG/M
S2T7BSa_1474245Not Available605Open in IMG/M
S2T7BSa_1487051All Organisms → Viruses → Predicted Viral1049Open in IMG/M
S2T7BSa_1498466All Organisms → Viruses → Predicted Viral2570Open in IMG/M
S2T7BSa_1505324All Organisms → Viruses → Predicted Viral1762Open in IMG/M
S2T7BSa_1511137All Organisms → cellular organisms → Bacteria893Open in IMG/M
S2T7BSa_1517995Not Available578Open in IMG/M
S2T7BSa_1518457Not Available1261Open in IMG/M
S2T7BSa_1531678Not Available895Open in IMG/M
S2T7BSa_1578786All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → crAss-like viruses → unclassified Crassvirales → Podoviridae sp. ctrTa161611Open in IMG/M
S2T7BSa_1583907All Organisms → Viruses → Predicted Viral1346Open in IMG/M
S2T7BSa_1599282All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster565Open in IMG/M
S2T7BSa_1614064Not Available855Open in IMG/M
S2T7BSa_1624311All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes739Open in IMG/M
S2T7BSa_1628846Not Available532Open in IMG/M
S2T7BSa_1645449All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium SCGC AAA164-I212292Open in IMG/M
S2T7BSa_1648391Not Available598Open in IMG/M
S2T7BSa_1676513All Organisms → cellular organisms → Bacteria598Open in IMG/M
S2T7BSa_1687184All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage614Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
S2T7BSa_1002674S2T7BSa_10026742F002303MENRVITDPNTGEQKIIEVMDIREQCRERAIEFAKDWGFENVSFHILDIMVSIMCTRDKSSYAGGGFVEAVVANNLYLAMSRADTDCRNNIFLLTMCCNNCYL*
S2T7BSa_1018061S2T7BSa_10180614F031070MRIHKTPFRTRRAPYWNFWRVVLAGWIIRYPKIVWVPIGFLIVLIYNAVVN*
S2T7BSa_1037546S2T7BSa_10375463F028525MTKTLKEMRLDLQEQEASTSDLQYIRAKTNYNDHFEARRYIADKILRDKKLADTY
S2T7BSa_1042844S2T7BSa_10428441F041158GSHYIFSPLVSSSFLGTYNFQGVGPTASAQYSVLRFDEGRDYFVPQPEFSLTETVPFENVSDVTIVHNLGVMYPVVQIYSTGSFGEEFQIIPASVIAVDENTVRITFSGLTSGQAVIGSGGSVLSGTIEGDRVFGPVLSASFADRARLADEVTGFDSASLSALSASL
S2T7BSa_1043056S2T7BSa_10430566F048940TRVPLFILIKMTVAQRMEKQFFLSFIDLINEVQGIQKLPSQLNFNRKSSWMKQVSNPRQKKDALARI*
S2T7BSa_1055043S2T7BSa_105504310F044824MKYRFAKSIGNYGISDESAAYLIENNQSFAVGLSREGNKKIAWVGFDQYGIRFECIAIVFIDALYIIHLKPIEAKEDIDEVKKRLW*
S2T7BSa_1077923S2T7BSa_10779231F002092MEILLYIYTVINEITTMKTMNQKSLDYLKGNPKVAEFLTKVNEERKEYYKNIMSSKSNTDLVMEVGNKFLRFWDGTACWGFISRVDGDLKGAPIKKGDLLKCASWKAPAKHAR
S2T7BSa_1094531S2T7BSa_10945312F049641LSKDDLEPPYRPADAGPKDKFIYESPDGGNTVYARPFGIHDRALRKKVYENPEMLEEKAFFERWHMYRDILEVSKDNEVIAKLLEQVELLYRLNK*
S2T7BSa_1142951S2T7BSa_11429512F015080MFNLLNFQPHLNGIPNAIAARHKFENDWDISVVSGPAGCGLYGNLNDGTYEVAIIRPNGNMTDDVNGWNTKQEVSAMMWVLAQL*
S2T7BSa_1149624S2T7BSa_11496247F016995MLQKNINIESSAREKRIIKRLNLKNLPFETSLEEFCSKYIEMISDLKESFILGSDKPGMQWCLSTIKKFKVFLLIFEANALGIEVYKESISSKLPEYSYKTIAQIIDEGLEKGFFIKMSARIQKKHDLKIRNIRPSEDLTVEFINSNIEIISSLMKFLRKHK*
S2T7BSa_1167588S2T7BSa_11675883F009839MTVKFGCFHTVYENKRATEFVLEEFRKYHPDAPYTICCDGGVDYSDLCEKYKVNYVHSYMRIGRRNSGHPSGVYGFTKDESLHWIHMFREAARHVRENGGTHMIMMEDDVLTQGEVNINPIWECAGFEVPGNTIAPALLDFIRDKYGANPNVNWYGAGGGSIYNIETFLDNYHKIYDFIDFDFENILSNMDYRFGWLDLYMQIAYFVIGKHYSINTNLTEVWKTPNFRESDFTLVHAYKELY*
S2T7BSa_1190242S2T7BSa_11902423F075980MNEFRYIFEDRFAECATDAKADREELNNFFNNSVKEKIGDHASVGVDSSKQHIYNVCYDCNILLWNEIYQRMVNIADQCNVKLNWDEIKHCLRFTFIWMPPGGDLVPHTANKFRALSAFNIPLRGKTEISFYEHLPQHKVGKKLETHEYFHPCFLNVNRFHGVVNDTDQERMIFKTHLMIVPWEKLIESYTGNNKVNMFNFVVPWQKVEIKPNTKKAD*
S2T7BSa_1273039S2T7BSa_12730393F023097MKSYCVKDHLTGHVFKVLFTEQDFQEFLKSHPDIDECIDCIECDDAPSICIE*
S2T7BSa_1296680S2T7BSa_12966801F072108EHKITSKGMMIGLVSPNYSNIGNLDISTKALVGFGKSETERKLLDSTSSTGERVLEGDYYSLFGNLGASVSNKNNFGKFSSLNLVLGADINSEMRESFNETLYNEYDELILVQLQPRLEADLTLGFSERSNVFLKTGIEAREIISGKTQDYSMGGTKVSYTTATPSDVYASVSVGANLNIYNDIDFFAVASARSSEEKTESYQASFGIKGKF*
S2T7BSa_1328526S2T7BSa_13285262F023138MATKEPYTEAQVRFILDNYINNEDRSVRETGHSLGSIKLMLQNIAATYGLVNFGTGNPMYTRIADEYRENNPVFGETMSKRSFCMRFGVIKD*
S2T7BSa_1348593S2T7BSa_13485931F020114MKPQTFKHISRCIDKHGVHHLDALDDYGRHWYATMQQKEEPWLIYIQKWELRTH*
S2T7BSa_1367828S2T7BSa_13678281F068814RCSPLMGPSVLMNIPLVSEDLFGTSLKLKPHETLMVKSVVAFMMEKYGFKAKIIVKKKERAGLIGDISLSSTSVDGNKFYLNFNPNQSYGRIIQTMLHELTHVKQVSKGELLPNKDYTAILWKGKEYIAAKDYNKLLKSNPSEYMKLPWEVEAVSNMKSLYPQFIKSKHWLGLKGKDTTLDYIINNI*
S2T7BSa_1393045S2T7BSa_13930455F020114MTMKPQTFKHISRCIDKHGVHHLDALDDYGRHWYATMQQKEEPWLTYVQHWELRTH*
S2T7BSa_1398517S2T7BSa_13985172F024724MENLIRVKYYFKEHPNTTLSVFLKTQEQVESYKAKHPNYVYVEESN*
S2T7BSa_1417017S2T7BSa_14170172F007973MIQIDGEVHQLLKQFCKEKGYKISGLVETLIKDKVESVKRPLPKNTLSTKI*
S2T7BSa_1421055S2T7BSa_142105510F029603VVYTSTLGLISGEKSLKTFLPVDRGGKYAFIQIKASGYPQNLPKGPKCPKRYPQFSKSVGQQIPLPPALVAPNRSYAITSRPDQSQQLKLRAVFKGVREEDEAYFPAE*
S2T7BSa_1421055S2T7BSa_142105512F023494MKGNAALNRAFISFPQLNRLVTTTNFIDKKSHLREQILIRSFKSNQLSKVKTKELG*
S2T7BSa_1466864S2T7BSa_14668642F085375MVDFIKPNWDIEEFKTLNYILSTHKDGKLVDQYLTSGHSKEKLSIYKYQLPNKMPKCVDEYIIPHFTFLDKVTPAVNYFKPGQYLPLHIDLYGKYIEINDITFENVIRCMVMLEDNSPGQILQITNKCIGSWKSGDCFYWNYDEIHAFYNFSMKDRYAIQLTGVLK*
S2T7BSa_1474245S2T7BSa_14742452F001968MEDDLFSEIQDSPGEIFDIPELRDLDEDKFDVNEYLNSNYDY*
S2T7BSa_1487051S2T7BSa_14870514F066743IEQQLENLMSLDEDLEYEYECELYYDCNDDEEPEPIIEKFTPELLTELENLVYGLDND*
S2T7BSa_1498466S2T7BSa_14984663F001881MTERSQNFMSKIWELRNAGADTEEKLVAAILKVVAENTKSYTAQDNLIVLDKNDILELAEELEQ*
S2T7BSa_1505324S2T7BSa_15053246F012107MTRYDVRCGQAPWENTTTDLDSAIDLAYHLSEDYQCDVNIHYNHTGTIYTTVSNY*
S2T7BSa_1511137S2T7BSa_15111371F093414IMAKLLVAFLMSLVLFGCNNNPSSDASASDTEPTEEVPAEDAPMDEAPAENADSE*
S2T7BSa_1517995S2T7BSa_15179951F055670MKKFKVQILGETYEVSEKSFRNKPNGDGTLSTYCYISHAEAGSLVRQFAKKFFPQYVVRVSSSSFAGGNSLDVYVSTKNGGPVPQAAYEKISQFARLWVYGKFDGMTDCYDHYEESGITSDKGTELQAGVKYVMVYNRPRFGTVEAILNEVLNEGREFAEVVRFYTD
S2T7BSa_1518457S2T7BSa_15184573F091973MRSLIDPVWFLLLFLTFAIFVKVANTKLNRVIKLLTRVSISILVFLSTGVATLIFDQILATETSPKSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRVNAASALWQKYPKSLVVFSG
S2T7BSa_1531678S2T7BSa_15316783F036986MATSTKNAFEIRSDLLGLAKQLADFNFQAQVKEFEYSIKKDGDQVVQEFKAPTLSPDDIINTAKKFNDFVTNGDVVKTMQDNFEKGLEMSKPYADAYQNTVKAFFPNLKNGK*
S2T7BSa_1578786S2T7BSa_15787861F075742MKLKLGNSVYKKDLSNSVYQQSGANFGLTVNKGMLINNRPDGQTGIQQAATAKKVVKKMEKVQMMAEAVFLGNIRSEMMKGPEMG*
S2T7BSa_1583907S2T7BSa_15839071F036668MTLYAFTDKKVLTVREQLQEDLITLLDSQFGEVDYLDDVKDLACQIV
S2T7BSa_1599282S2T7BSa_15992821F015024MMEYKEYYELFKQYPEWEIEHHNHKEGFNGEGNPELEQALVEMVEKDDTLFLYKEKAFHFSMLLLNKQYADLDFWVCTTHALHDVSEHKQGLLDDGDYRLYFADAQGPIDDEEPQGYLCDLPLNVKDGHFNIDEFEQILEEILSFEGALEDTYYIEELI
S2T7BSa_1614064S2T7BSa_16140641F009073MKNYQIILTSVLSFTVAYWIMNGTAQKYVHFAGELNELGCTVIALTMGILSLIAVDYKKLINGLN*
S2T7BSa_1624311S2T7BSa_16243113F088307MTDAPWLDCMDGFKYSQEDDAAILDKAALKVSQILRISVGEIDKTKFVYLYTLLYNMMGQGADGKPCEDGDENMRHWLNTHNTHLGFFPAAELVNRMPEIISYLESFL*
S2T7BSa_1628846S2T7BSa_16288462F023138MATKEPYTEAQVRFILDNYINNEDRSVRETGHSLGSIKLMLQNIAATYGLVNFGTGNPMYTRIADEYRENNPVFGETMSKR
S2T7BSa_1645449S2T7BSa_16454492F011355MKSLVVIVILLANPDNLEKNYYPVDTEDSCDVVGQRIIEQIAKYKDNIGEHQGWYTLDNKLVVGHYCTVK*
S2T7BSa_1648391S2T7BSa_16483911F049578MRTLKYSHLGEKVIIRVAQKTTNILPQLQDLMQQLEENGKDSREVISSVLSNIEETLCTDN*
S2T7BSa_1676513S2T7BSa_16765133F074884ISDKIYPNELVRDLMDINDIIQNKRSELEQLKTREEVVNATSKIVRSYYDKRKNE*
S2T7BSa_1687184S2T7BSa_16871841F007054MKRIEEFQKAIEGVKFTPPQKKIVNLILKGYTIEVVNKHHMSGGELMWKNPNSDYLEHAGKVYKAFFNVFYQIKKQSGVVLPTTGYIN*
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