NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F092073

Metagenome Family F092073

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F092073
Family Type Metagenome
Number of Sequences 107
Average Sequence Length 51 residues
Representative Sequence MKLHKLHTGVIITHIDIGTGISVKARHPKDKDYIVWELLHRTQEFYRGLL
Number of Associated Samples 87
Number of Associated Scaffolds 107

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 41.12 %
% of genes near scaffold ends (potentially truncated) 21.50 %
% of genes from short scaffolds (< 2000 bps) 67.29 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (67.290 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(20.561 % of family members)
Environment Ontology (ENVO) Unclassified
(59.813 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(84.112 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.00%    β-sheet: 22.00%    Coil/Unstructured: 44.00%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 107 Family Scaffolds
PF04466Terminase_3 16.82
PF08299Bac_DnaA_C 2.80
PF14550Peptidase_S78_2 1.87
PF12684DUF3799 1.87
PF08291Peptidase_M15_3 0.93
PF12843QSregVF_b 0.93
PF03796DnaB_C 0.93
PF01555N6_N4_Mtase 0.93
PF00856SET 0.93
PF02195ParBc 0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 107 Family Scaffolds
COG1783Phage terminase large subunitMobilome: prophages, transposons [X] 16.82
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 2.80
COG0305Replicative DNA helicaseReplication, recombination and repair [L] 0.93
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.93
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.93
COG1066DNA repair protein RadA/Sms, contains AAA+ ATPase domainReplication, recombination and repair [L] 0.93
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.93


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A67.29 %
All OrganismsrootAll Organisms32.71 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2236876002|none_p120058Not Available512Open in IMG/M
3300000116|DelMOSpr2010_c10130042Not Available894Open in IMG/M
3300000116|DelMOSpr2010_c10204485Not Available630Open in IMG/M
3300000116|DelMOSpr2010_c10245319Not Available548Open in IMG/M
3300001450|JGI24006J15134_10001459Not Available13468Open in IMG/M
3300001947|GOS2218_1007512All Organisms → Viruses → Predicted Viral1560Open in IMG/M
3300003409|JGI26088J50261_1000332Not Available28307Open in IMG/M
3300003409|JGI26088J50261_1001755Not Available11447Open in IMG/M
3300004097|Ga0055584_101292188Not Available760Open in IMG/M
3300004448|Ga0065861_1014403All Organisms → Viruses → Predicted Viral3360Open in IMG/M
3300004460|Ga0066222_1050310Not Available626Open in IMG/M
3300004829|Ga0068515_109033Not Available1255Open in IMG/M
3300005239|Ga0073579_1189330Not Available29227Open in IMG/M
3300005239|Ga0073579_1667715Not Available952Open in IMG/M
3300005433|Ga0066830_10000708Not Available5477Open in IMG/M
3300005510|Ga0066825_10108429All Organisms → Viruses → Predicted Viral1012Open in IMG/M
3300005512|Ga0074648_1004443Not Available11181Open in IMG/M
3300005512|Ga0074648_1036752All Organisms → Viruses → Predicted Viral2345Open in IMG/M
3300005600|Ga0070726_10639597Not Available537Open in IMG/M
3300005611|Ga0074647_1013749All Organisms → Viruses → Predicted Viral1426Open in IMG/M
3300005613|Ga0074649_1008831Not Available7487Open in IMG/M
3300006467|Ga0099972_12081272All Organisms → Viruses → Predicted Viral1003Open in IMG/M
3300006752|Ga0098048_1161335Not Available667Open in IMG/M
3300006752|Ga0098048_1245002Not Available524Open in IMG/M
3300006789|Ga0098054_1016623All Organisms → Viruses → Predicted Viral2962Open in IMG/M
3300006793|Ga0098055_1270362Not Available637Open in IMG/M
3300006802|Ga0070749_10001966Not Available13919Open in IMG/M
3300006874|Ga0075475_10445337Not Available516Open in IMG/M
3300006919|Ga0070746_10329164Not Available696Open in IMG/M
3300006922|Ga0098045_1137802Not Available565Open in IMG/M
3300006924|Ga0098051_1058408All Organisms → Viruses → Predicted Viral1059Open in IMG/M
3300007346|Ga0070753_1055633All Organisms → Viruses → Predicted Viral1614Open in IMG/M
3300007346|Ga0070753_1245555Not Available651Open in IMG/M
3300007538|Ga0099851_1088699All Organisms → Viruses → Predicted Viral1186Open in IMG/M
3300007539|Ga0099849_1324045Not Available552Open in IMG/M
3300007540|Ga0099847_1108453Not Available842Open in IMG/M
3300007542|Ga0099846_1017638All Organisms → Viruses → Predicted Viral2786Open in IMG/M
3300007670|Ga0102862_1171983Not Available558Open in IMG/M
3300010153|Ga0098059_1005809Not Available5414Open in IMG/M
3300010296|Ga0129348_1085068Not Available1122Open in IMG/M
3300010318|Ga0136656_1264834Not Available564Open in IMG/M
3300011118|Ga0114922_10094163All Organisms → Viruses → Predicted Viral2568Open in IMG/M
3300011118|Ga0114922_11173436Not Available621Open in IMG/M
3300011253|Ga0151671_1017943Not Available5957Open in IMG/M
3300011258|Ga0151677_1022882Not Available543Open in IMG/M
3300017725|Ga0181398_1003989All Organisms → Viruses → Predicted Viral3963Open in IMG/M
3300017728|Ga0181419_1023220All Organisms → Viruses → Predicted Viral1728Open in IMG/M
3300017742|Ga0181399_1049705All Organisms → Viruses → Predicted Viral1097Open in IMG/M
3300017746|Ga0181389_1176737Not Available559Open in IMG/M
3300017749|Ga0181392_1018098All Organisms → Viruses → Predicted Viral2260Open in IMG/M
3300017752|Ga0181400_1054391Not Available1234Open in IMG/M
3300017770|Ga0187217_1191968Not Available676Open in IMG/M
3300017770|Ga0187217_1192139Not Available676Open in IMG/M
3300017776|Ga0181394_1098909Not Available933Open in IMG/M
3300017782|Ga0181380_1003659Not Available6350Open in IMG/M
3300017824|Ga0181552_10012091Not Available5605Open in IMG/M
3300017967|Ga0181590_10275423All Organisms → Viruses → Predicted Viral1233Open in IMG/M
3300017971|Ga0180438_10663078Not Available768Open in IMG/M
3300018080|Ga0180433_10085083All Organisms → Viruses → Predicted Viral2778Open in IMG/M
3300018416|Ga0181553_10177132Not Available1249Open in IMG/M
3300018416|Ga0181553_10298551Not Available897Open in IMG/M
3300018416|Ga0181553_10300639Not Available893Open in IMG/M
3300018416|Ga0181553_10394295Not Available753Open in IMG/M
3300018420|Ga0181563_10138150Not Available1547Open in IMG/M
3300018420|Ga0181563_10219839All Organisms → Viruses → Predicted Viral1147Open in IMG/M
3300018420|Ga0181563_10235032Not Available1099Open in IMG/M
3300018876|Ga0181564_10488111Not Available661Open in IMG/M
3300021371|Ga0213863_10069241All Organisms → Viruses → Predicted Viral1763Open in IMG/M
3300021425|Ga0213866_10204182All Organisms → Viruses → Predicted Viral1025Open in IMG/M
3300021957|Ga0222717_10002139Not Available15500Open in IMG/M
3300021958|Ga0222718_10105898All Organisms → Viruses → Predicted Viral1650Open in IMG/M
3300021958|Ga0222718_10190675All Organisms → Viruses → Predicted Viral1126Open in IMG/M
3300021958|Ga0222718_10543349Not Available554Open in IMG/M
3300021959|Ga0222716_10718473Not Available528Open in IMG/M
3300021960|Ga0222715_10011526Not Available7012Open in IMG/M
3300021964|Ga0222719_10019114Not Available5478Open in IMG/M
3300022187|Ga0196899_1128391Not Available724Open in IMG/M
3300022200|Ga0196901_1285636Not Available501Open in IMG/M
3300022925|Ga0255773_10038226All Organisms → Viruses → Predicted Viral3004Open in IMG/M
3300022925|Ga0255773_10366619Not Available559Open in IMG/M
(restricted) 3300024059|Ga0255040_10022980All Organisms → Viruses → Predicted Viral2168Open in IMG/M
(restricted) 3300024059|Ga0255040_10237486Not Available753Open in IMG/M
3300024183|Ga0228603_1000022Not Available29104Open in IMG/M
(restricted) 3300024518|Ga0255048_10438582Not Available632Open in IMG/M
3300025070|Ga0208667_1004084All Organisms → Viruses → Predicted Viral4225Open in IMG/M
3300025070|Ga0208667_1070196Not Available530Open in IMG/M
3300025083|Ga0208791_1004283All Organisms → Viruses → Predicted Viral4128Open in IMG/M
3300025085|Ga0208792_1100975Not Available502Open in IMG/M
3300025098|Ga0208434_1113234Not Available518Open in IMG/M
3300025099|Ga0208669_1005808All Organisms → Viruses → Predicted Viral3752Open in IMG/M
3300025103|Ga0208013_1060467All Organisms → Viruses → Predicted Viral1009Open in IMG/M
3300025108|Ga0208793_1174940Not Available552Open in IMG/M
3300025131|Ga0209128_1165956Not Available649Open in IMG/M
3300025168|Ga0209337_1000893Not Available23578Open in IMG/M
3300025483|Ga0209557_1102405Not Available587Open in IMG/M
3300025608|Ga0209654_1000765Not Available29521Open in IMG/M
3300025647|Ga0208160_1079340Not Available882Open in IMG/M
3300025655|Ga0208795_1037033All Organisms → Viruses → Predicted Viral1504Open in IMG/M
3300026136|Ga0208763_1000355Not Available9633Open in IMG/M
3300026201|Ga0208127_1013010All Organisms → Viruses → Predicted Viral3149Open in IMG/M
(restricted) 3300027861|Ga0233415_10020933All Organisms → Viruses → Predicted Viral2605Open in IMG/M
(restricted) 3300027861|Ga0233415_10296434Not Available762Open in IMG/M
3300028133|Ga0228609_1122972Not Available653Open in IMG/M
3300028920|Ga0272441_10485994All Organisms → Viruses → Predicted Viral1005Open in IMG/M
3300029302|Ga0135227_1025640Not Available623Open in IMG/M
3300029448|Ga0183755_1014895All Organisms → Viruses → Predicted Viral2813Open in IMG/M
3300032277|Ga0316202_10150735All Organisms → Viruses → Predicted Viral1080Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine20.56%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous12.15%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh11.21%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater11.21%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water6.54%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.67%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater3.74%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.80%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.80%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.87%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.87%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.87%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.87%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine1.87%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment1.87%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment1.87%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment0.93%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.93%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.93%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine0.93%
Marine SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Marine Sediment0.93%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.93%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.93%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water0.93%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.93%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment0.93%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.93%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2236876002Marine microbial communities from Columbia River, CM, sample from CR-7km from mouth, GS312-0p8-CR7-chlmaxEnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001947Marine microbial communities from the Gulf of Maine, Canada - GS002EnvironmentalOpen in IMG/M
3300003409Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNAEnvironmentalOpen in IMG/M
3300004097Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaGEnvironmentalOpen in IMG/M
3300004448Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004460Marine viral communities from Newfoundland, Canada BC-1EnvironmentalOpen in IMG/M
3300004829Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-EVsEnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300005433Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45BEnvironmentalOpen in IMG/M
3300005510Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005600Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.1EnvironmentalOpen in IMG/M
3300005611Saline surface water microbial communities from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006922Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaGEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007670Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3EnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300011118Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaGEnvironmentalOpen in IMG/M
3300011253Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_2, permeateEnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300017725Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017752Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300017782Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19EnvironmentalOpen in IMG/M
3300017824Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017971Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018876Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021371Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022925Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaGEnvironmentalOpen in IMG/M
3300024059 (restricted)Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2EnvironmentalOpen in IMG/M
3300024183Seawater microbial communities from Monterey Bay, California, United States - 3DEnvironmentalOpen in IMG/M
3300024518 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_2EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025085Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025098Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025131Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025483Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025608Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300026136Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B (SPAdes)EnvironmentalOpen in IMG/M
3300026201Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45 (SPAdes)EnvironmentalOpen in IMG/M
3300027861 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MGEnvironmentalOpen in IMG/M
3300028133Seawater microbial communities from Monterey Bay, California, United States - 10DEnvironmentalOpen in IMG/M
3300028920Marine sediment archaeal communities from Little Sippewissett salt marsh, Falmouth, MA, United States - SSM-Prop-6NEnvironmentalOpen in IMG/M
3300029302Marine harbor viral communities from the Indian Ocean - SRB3EnvironmentalOpen in IMG/M
3300029448Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
none_12005822236876002Marine EstuarineRQENIYKNYYMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQEFYRGLY
DelMOSpr2010_1013004223300000116MarineMKLHKLHTGVIITHIDIGDGISVKARHPKDKDYIVWDLLYKTQEFYRGLL*
DelMOSpr2010_1020448523300000116MarineMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWDLLHRTQEFYRGLL*
DelMOSpr2010_1024531923300000116MarineKLHTGVIITHIDIGDGISVKARHPKDKDYIVWDLLYKTQEFYRGLL*
JGI24006J15134_1000145943300001450MarineMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYKVWELLHRTQEFYRGLL*
GOS2218_100751243300001947MarineMDTHTMGATNGDMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWDLLHRTQEFYRGLL*
JGI26088J50261_1000332173300003409MarineMKLHKLRSGVIITHTDIGTGISVKARHPQDKDYIVWDLLHRTQQFYKGI*
JGI26088J50261_1001755223300003409MarineMKLHKLHTGVIITHIDTDXGTRVQARHPKDLDYIVWDLLHRTQQFYRGLL*
Ga0055584_10129218823300004097Pelagic MarineMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYKVWELLHRTQEFYRGLF*
Ga0065861_101440353300004448MarineMKLNKLYTGVIITRIDIGDGTRVQARHPKDNDYIVWDLLYRTQEFYRGFI*
Ga0066222_105031023300004460MarineMKLNKLYTGVIITHIDIGTGISVKARHPKDKDYIVWDLLHRTQEFYKGLL*
Ga0068515_10903343300004829Marine WaterMDSCAMGATNGDMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQQFYRGLL*
Ga0073579_1189330373300005239MarineMKLHKLHTGVIITHIDIGDGISVKARHPKDKDYIVWDLLHRTQEFYRGLL*
Ga0073579_166771513300005239MarineMGATNGDMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWDLLHRTQEFYRGLL*
Ga0066830_1000070863300005433MarineMDTCTMGATNGDMKLHKLYTGVIITHIDTGDGISVKARHPEDKDYIVWELLYKTQEFYRGLF*
Ga0066825_1010842933300005510MarineMGATNGDMKLHKLYTGVIITHIDTGDGISVKARHPEDKDYIVWELLYKTQEFYRGLF*
Ga0074648_100444383300005512Saline Water And SedimentMKLHKLHTGVIITHIHTDIGISVKARHPQDRDYMVWDLLHRTQEFYRGLL*
Ga0074648_103675223300005512Saline Water And SedimentMGTRNEDMKLHKLRSGVIITHTDIGTGISVKARHPQDKDYIVWELLHRTQQFYKGL*
Ga0070726_1063959713300005600Marine SedimentMGATNGDMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHRTQEFYRGLL*
Ga0074647_101374933300005611Saline Water And SedimentHTGVIITHIHTDIGISVKARHPQDRDYMVWDLLHRTQEFYRGLL*
Ga0074649_100883153300005613Saline Water And SedimentMKLHKLRSGVIITHTDIGTGISVKARHPQDKDYIVWDLLHRTQQFYKGL*
Ga0099972_1208127223300006467MarineMGATNGDMKPHKLHTGVIITHIDIGDGISVKARHPKDKDYIVWDLLHRTQEFYRGLL*
Ga0098048_116133513300006752MarineMKLHKLHTGVIITHIHTGIGISVKARHPKDKDYIVWELLHKTQQFYRGLL*
Ga0098048_124500233300006752MarineMKLHKLYTGVIITHIDTGDGISVKARHPKDKDYIVWELLHKTQEFYRGLL*
Ga0098054_101662353300006789MarineMKLHKLYTGVIITHIHTDIGISVKARHPKDKDYIVWELLHRTQQFYRGLL*
Ga0098055_127036213300006793MarineMKLHKLHTGVIITHIDIGDGISVKARHPKDKDYKVWELLHRTQEFYRGLF*
Ga0070749_10001966293300006802AqueousMKLHKLHTGVIITHIDIGTGISVKARHPQDKDYIVWDLLHRTQEFYRGLL*
Ga0075475_1044533713300006874AqueousMKLHKLHTGVIITHIDIGTGISVKARHPQDKDYIVW
Ga0070746_1032916423300006919AqueousMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWDLLYKTQEFYRGLL*
Ga0098045_113780213300006922MarineMKLHKLHTGVIITHIDIGTGISVKARHPKDKDYIVWELLHRTQQFYRGLL*
Ga0098051_105840823300006924MarineMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQQFYRGLL*
Ga0070753_105563333300007346AqueousMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHRTQEFYRGLL*
Ga0070753_124555533300007346AqueousMKLHKLHTGVIITHIDIGTGISVKARHPQDKDYIVWDLLHR
Ga0099851_108869923300007538AqueousMKLHKLHTGVIITHIHTDIGISVKARHPQDRDYIVWDLLHRTQEFYRGLL*
Ga0099849_132404523300007539AqueousMKLHKLHTGVIITHIHTDIGISVKARHPQDRDYIVWDLLHRTQE
Ga0099847_110845323300007540AqueousMKLHKLHTGVIITHIDIGTGISVKARHPKDKDYIVWELLHRTQEFYRGLL*
Ga0099846_101763813300007542AqueousMKLHKLHTGVIITHIDIGTGISVKARHPKDRDYIVWDLLHRTQEFYRGLL*
Ga0102862_117198323300007670EstuarineMGATNGDMKLHKLYTGVIITHIDTGDGISVKARHPEDKDYMVWELLYKTQQFYRGLF*
Ga0098059_100580913300010153MarineMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYKVWELLH
Ga0129348_108506823300010296Freshwater To Marine Saline GradientMKLHKLHTGVIITYIDIGTGISVKARHPQDKDYIVWDLLHRTQEFYRGLL*
Ga0136656_126483423300010318Freshwater To Marine Saline GradientMKLHKLHTGVIITHIDIGTGISVKARHPKDRDYIVWDLLH
Ga0114922_1009416333300011118Deep SubsurfaceMKLHKLYTGVIITRIDIGDGTRVQARHPKDNDYIVWDLLYRTQEFYRGFI*
Ga0114922_1117343623300011118Deep SubsurfaceMKLHKLHTGVIITHIDIGTGISVKARHPKDKDYIVWDLLHRTQEFYKGLL*
Ga0151671_101794373300011253MarineMKLHKLYTGVIITRIEKGDGTRVQARHPKDNDYIVWDLLYRTQEFYRGFI*
Ga0151677_102288223300011258MarineMDTCTLVTTIRDMKLHKLYTGVIITRIEKGDGTRVQARHPKDNDYIVWDLLYRTQEFYRGFI*
Ga0181398_100398963300017725SeawaterMKLHKLHTGIIITHIHTDIGISVKARHPKDKDYIVWELLHKTQQFYRGLY
Ga0181419_102322073300017728SeawaterMKLHKLYTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQQFYRGLY
Ga0181399_104970533300017742SeawaterMKLHKLHTGVIITHIDIGDGISVKARHPKDKDYKVWELLHRTQEFYRGLL
Ga0181389_117673733300017746SeawaterMGATNGDMKLHKLHTGVIITHIHTDIGISVKARHPKDRDYIVWELL
Ga0181392_101809843300017749SeawaterMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYKVWELLHRTQQFYRGLL
Ga0181400_105439153300017752SeawaterMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQQFYRGLY
Ga0187217_119196813300017770SeawaterMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYKVWELLHRTQ
Ga0187217_119213923300017770SeawaterMKLHKLHTGVIITHIDTGTGISVKARHPKDRDYIVWELLHRTQQFYRGLL
Ga0181394_109890923300017776SeawaterMKLHKLYTGVIITHIDTGTGISVKARHPKDRDYIVWELLHRTQEFYRGLL
Ga0181380_100365973300017782SeawaterMDACIMGATNGDMKLHKLYTGVIITHIDTGTGISVKARHPKDKDYIVWELLHKTQQFYRGLY
Ga0181552_1001209153300017824Salt MarshMDTCTMGARDEHMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRTQEFYSRFK
Ga0181590_1027542313300017967Salt MarshVDTCTLGTRDEDMKLHKLHTGVIITHIDIGTGISVKARHPQDKDYIVWDLLHRTQEFYRGLL
Ga0180438_1066307823300017971Hypersaline Lake SedimentMKLHKLHTGVIITYIDIGTGISVKARHPQDKDYIVWDLLHRTQEFYRGLL
Ga0180433_1008508353300018080Hypersaline Lake SedimentMKLHKLHTGVIITHIDIGTGISVKARHPQDKDYIVWDLLHRTQEFYRGLL
Ga0181553_1017713263300018416Salt MarshMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRTQE
Ga0181553_1029855113300018416Salt MarshMGARDEHMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRTQEFYSRFK
Ga0181553_1030063913300018416Salt MarshMGARDEHMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRTQE
Ga0181553_1039429533300018416Salt MarshLTLDITKMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRTQEFYSRFK
Ga0181563_1013815053300018420Salt MarshLTLDITKMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYR
Ga0181563_1021983913300018420Salt MarshMGARDEHMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRTQEF
Ga0181563_1023503213300018420Salt MarshMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYR
Ga0181564_1048811113300018876Salt MarshRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRTQEFYSRFK
Ga0213863_1006924153300021371SeawaterMKLHKLHTGVIITHIDIGDGISVKARHPKDKDYIVWDLLYKTQEFYRGLL
Ga0213866_1020418223300021425SeawaterMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQEFYRGLL
Ga0222717_10002139133300021957Estuarine WaterMKLHKLYTGVIITHIHTDIGISVKARHPKDKDYIVWELLHRTQQFYRGLL
Ga0222718_1010589823300021958Estuarine WaterMKLHRLHTGVIITHIDTGLGVSVKVRHPKDIDYIVWELLYKTQEFYSRFK
Ga0222718_1019067523300021958Estuarine WaterMKLHKLHTGIIITHIDTGTGISVKARHPKDKDYIVWELLHRTQQFYRGLY
Ga0222718_1054334923300021958Estuarine WaterMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYKTQEFYSRFK
Ga0222716_1071847323300021959Estuarine WaterMKLHRLHTGVIITHINTELGISVKARHPKDRDYIVWELLHRTQQFYRGLY
Ga0222715_10011526123300021960Estuarine WaterMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQQFYRGLL
Ga0222719_1001911443300021964Estuarine WaterMDTCTMGARDADMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYKTQEFYSRFK
Ga0196899_112839123300022187AqueousMGTTNGDMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHRTQEFYKGLL
Ga0196901_128563623300022200AqueousMKLHKLHTGVIITHIHTDIGISVKARHPQDRDYIVWDLLHRTQEFYRGLL
Ga0255773_1003822653300022925Salt MarshMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRTQEFYSRFK
Ga0255773_1036661913300022925Salt MarshLTLDITKMKLHRLHTGVIITHIDTGLGISVKVRHPKDIDYIVWELLYRT
(restricted) Ga0255040_1002298053300024059SeawaterMKLHKLHTGVIITHIDIGTGISVKARHPKDKDYIVWDLLHKTQEFYRGLY
(restricted) Ga0255040_1023748623300024059SeawaterMKLHKLYTGVILTRIDIGDGTRVQARHPKDNDYIVWDLLYRTQEFYRGFI
Ga0228603_100002283300024183SeawaterMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHRTQQFYRGLY
(restricted) Ga0255048_1043858223300024518SeawaterMKLHKLHTGVIITHIDIGTGISVKARHPKDKDYIVWDLLHRTQEFYRGLL
Ga0208667_100408423300025070MarineMKLHKLHTGVIITHIHTGIGISVKARHPKDKDYIVWELLHKTQQFYRGLL
Ga0208667_107019613300025070MarineMGATNGDMKLHKLYTGVIITHIDTGDGISVKARHPKDKDYIVWELLHRTQEFYRGLL
Ga0208791_100428323300025083MarineMKLHKLHTGVIITHIDIGTGISVKARHPKDKDYIVWELLHRTQEFYRGLL
Ga0208792_110097523300025085MarineMGTTNGDMKLHKLHTGVIITHIHTGIGISVKARHPKDKDYIVWELLHKTQQFYRGLL
Ga0208434_111323423300025098MarineMGATNGDMKLHKLHTGVIITHIDIGTGISVKARHPKDKDYIVWELLHRTQEFYRGLL
Ga0208669_100580883300025099MarineMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYKVWELLHRTQEFYRGLF
Ga0208013_106046713300025103MarineGTTNGDMKLHKLYTGVIITHIHTDIGISVKARHPKDKDYIVWELLHRTQQFYRGLL
Ga0208793_117494013300025108MarineMKLHKLHTGVIITHIDIGDGISVKARHPKDKDYKVWELLHRTQEFYRGLF
Ga0209128_116595613300025131MarineMGATNGDMKLHKLYTGVIITHIDTGDGISVKARHPEDKDYIVWELLYKTQEFYRGLF
Ga0209337_1000893183300025168MarineMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYKVWELLHRTQEFYRGLL
Ga0209557_110240513300025483MarineHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQQFYRGLL
Ga0209654_1000765263300025608MarineMKLHKLRSGVIITHTDIGTGISVKARHPQDKDYIVWDLLHRTQQFYKGI
Ga0208160_107934033300025647AqueousMKLHKLHTGVIITHIDIGTGISVKARHPQDRDYIVWDLLHRTQEFYRGLL
Ga0208795_103703313300025655AqueousVDTCTLGTRNEDMKLHKLHTGVIITHIDIGTGISVKARHPQDRDYIVWDLLHRTQEFYRGLL
Ga0208763_100035573300026136MarineMDTCTMGATNGDMKLHKLYTGVIITHIDTGDGISVKARHPEDKDYIVWELLYKTQEFYRGLF
Ga0208127_101301053300026201MarineMKLHKLYTGVIITHIDTGDGISVKARHPEDKDYIVWELLYKTQEFYRGLF
(restricted) Ga0233415_1002093333300027861SeawaterMKLHKLYTGVIITRIDIGDGTRVQARHPKDNDYIVWDLLYRTQEFYRGFI
(restricted) Ga0233415_1029643423300027861SeawaterVRQENIYKNYYMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWELLHKTQEFYRGL
Ga0228609_112297223300028133SeawaterMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYKVWELLHKTQQFYRGLL
Ga0272441_1048599423300028920Marine SedimentMKLHKLHTGVIITHIDIGDGISVKARHPKDKDYIVWDLLHRTQEFYRGLL
Ga0135227_102564013300029302Marine HarborMKLHKLRSGVIITHTDIGTGISVKARHPQDKDYIVWDLLHRTQQFYKGLL
Ga0183755_101489513300029448MarineCTMGTTNGDMKLHKLRSGVIITHTDIGTGISVKARHPQDKDYIVWDLLHRTQQFYKGLL
Ga0316202_1015073523300032277Microbial MatMKLHKLHTGVIITHIHTDIGISVKARHPKDKDYIVWDLLHRTQEFYRGLL


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