Metagenome Family F097522

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F097522
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	62 residues
Representative Sequence	MKKLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKV
Number of Associated Samples	55
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	15.53 %
% of genes near scaffold ends (potentially truncated)	29.81 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (80.769 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (21.154 % of family members)
Environment Ontology (ENVO)	Unclassified (95.192 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (72.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.04% β-sheet: 0.00% Coil/Unstructured: 36.96%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02195	ParBc	4.81
PF13759	2OG-FeII_Oxy_5	3.85
PF02675	AdoMet_dc	2.88
PF14236	DUF4338	2.88
PF00856	SET	2.88
PF01230	HIT	2.88
PF01165	Ribosomal_S21	1.92
PF00152	tRNA-synt_2	0.96
PF01258	zf-dskA_traR	0.96
PF13640	2OG-FeII_Oxy_3	0.96
PF02086	MethyltransfD12	0.96
PF01618	MotA_ExbB	0.96
PF00156	Pribosyltran	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1586	S-adenosylmethionine decarboxylase	Amino acid transport and metabolism [E]	2.88
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	1.92
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.96
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.96
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.96
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.96
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
All Organisms	root	All Organisms	19.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
cellular organisms	root	All Organisms → cellular organisms	12.50 %
Viruses	superkingdom	All Organisms → Viruses	6.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	11.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.73 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.73 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	8.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.73 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	6.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.73 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	6.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.77 %
SAR202 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	6.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	6.73 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.92 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000152\|LPjun08P12500mDRAFT_c1052080	Not Available	561	Open in IMG/M
3300000181\|LPjun08P4500mDRAFT_c1031529	Not Available	698	Open in IMG/M
3300000264\|LP_A_09_P04_500DRAFT_1042976	Not Available	528	Open in IMG/M
3300001450\|JGI24006J15134_10003445	Not Available	8481	Open in IMG/M
3300001683\|GBIDBA_10012325	Not Available	7541	Open in IMG/M
3300001683\|GBIDBA_10059752	Not Available	2704	Open in IMG/M
3300001683\|GBIDBA_10070943	Not Available	1199	Open in IMG/M
3300005402\|Ga0066855_10289598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	539	Open in IMG/M
3300005431\|Ga0066854_10241131	Not Available	610	Open in IMG/M
3300006002\|Ga0066368_10212392	Not Available	659	Open in IMG/M
3300006091\|Ga0082018_1083228	Not Available	572	Open in IMG/M
3300006304\|Ga0068504_1060829	Not Available	584	Open in IMG/M
3300006308\|Ga0068470_1565264	Not Available	670	Open in IMG/M
3300006310\|Ga0068471_1167479	Not Available	2600	Open in IMG/M
3300006310\|Ga0068471_1230436	Not Available	3333	Open in IMG/M
3300006310\|Ga0068471_1282631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	2534	Open in IMG/M
3300006310\|Ga0068471_1291623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	1384	Open in IMG/M
3300006310\|Ga0068471_1309829	Not Available	1800	Open in IMG/M
3300006310\|Ga0068471_1344423	Not Available	1766	Open in IMG/M
3300006310\|Ga0068471_1494127	Not Available	1465	Open in IMG/M
3300006325\|Ga0068501_1101142	Not Available	2774	Open in IMG/M
3300006325\|Ga0068501_1225468	Not Available	633	Open in IMG/M
3300006335\|Ga0068480_1183931	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
3300006335\|Ga0068480_1529024	Not Available	515	Open in IMG/M
3300006336\|Ga0068502_1146308	Not Available	8832	Open in IMG/M
3300006336\|Ga0068502_1148104	Not Available	1771	Open in IMG/M
3300006336\|Ga0068502_1293616	Not Available	4323	Open in IMG/M
3300006336\|Ga0068502_1478545	Not Available	592	Open in IMG/M
3300006338\|Ga0068482_1474796	Not Available	502	Open in IMG/M
3300006339\|Ga0068481_1187708	Not Available	2177	Open in IMG/M
3300006340\|Ga0068503_10389978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	861	Open in IMG/M
3300006340\|Ga0068503_10551804	Not Available	602	Open in IMG/M
3300006341\|Ga0068493_10165275	All Organisms → cellular organisms → Bacteria	10765	Open in IMG/M
3300006347\|Ga0099697_1430675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	979	Open in IMG/M
3300006902\|Ga0066372_10164611	Not Available	1194	Open in IMG/M
3300006902\|Ga0066372_10451465	Not Available	750	Open in IMG/M
3300007291\|Ga0066367_1136628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	919	Open in IMG/M
3300009173\|Ga0114996_10080313	All Organisms → Viruses → Predicted Viral	2821	Open in IMG/M
3300009173\|Ga0114996_10170572	Not Available	1777	Open in IMG/M
3300009173\|Ga0114996_10610105	Not Available	809	Open in IMG/M
3300009409\|Ga0114993_10486590	Not Available	918	Open in IMG/M
3300009441\|Ga0115007_11221907	Not Available	524	Open in IMG/M
3300017775\|Ga0181432_1128283	Not Available	770	Open in IMG/M
3300017775\|Ga0181432_1211419	Not Available	609	Open in IMG/M
3300020399\|Ga0211623_10109934	Not Available	951	Open in IMG/M
3300020444\|Ga0211578_10442308	Not Available	544	Open in IMG/M
3300020458\|Ga0211697_10192580	Not Available	843	Open in IMG/M
3300021065\|Ga0206686_1149975	Not Available	684	Open in IMG/M
3300021068\|Ga0206684_1286962	Not Available	512	Open in IMG/M
3300021084\|Ga0206678_10247325	Not Available	871	Open in IMG/M
3300021089\|Ga0206679_10222003	Not Available	1049	Open in IMG/M
3300021089\|Ga0206679_10365095	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300021352\|Ga0206680_10107670	All Organisms → Viruses → Predicted Viral	1076	Open in IMG/M
3300021442\|Ga0206685_10352941	Not Available	502	Open in IMG/M
3300021443\|Ga0206681_10072142	Not Available	1343	Open in IMG/M
3300021443\|Ga0206681_10076202	All Organisms → Viruses → Predicted Viral	1306	Open in IMG/M
3300025168\|Ga0209337_1113951	Not Available	1232	Open in IMG/M
3300025168\|Ga0209337_1140707	All Organisms → Viruses → Predicted Viral	1059	Open in IMG/M
3300025168\|Ga0209337_1241584	Not Available	699	Open in IMG/M
3300027699\|Ga0209752_1045070	Not Available	1488	Open in IMG/M
3300027827\|Ga0209035_10307016	Not Available	786	Open in IMG/M
3300027827\|Ga0209035_10331383	Not Available	752	Open in IMG/M
3300027838\|Ga0209089_10023153	Not Available	4326	Open in IMG/M
3300027838\|Ga0209089_10481753	Not Available	673	Open in IMG/M
3300027844\|Ga0209501_10481790	Not Available	715	Open in IMG/M
3300028190\|Ga0257108_1059258	Not Available	1148	Open in IMG/M
3300028190\|Ga0257108_1099177	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	862	Open in IMG/M
3300028190\|Ga0257108_1159751	Not Available	652	Open in IMG/M
3300028192\|Ga0257107_1104061	Not Available	847	Open in IMG/M
3300028192\|Ga0257107_1139980	Not Available	709	Open in IMG/M
3300028192\|Ga0257107_1159241	Not Available	656	Open in IMG/M
3300028488\|Ga0257113_1056462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1256	Open in IMG/M
3300028488\|Ga0257113_1091736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	946	Open in IMG/M
3300028489\|Ga0257112_10148824	Not Available	835	Open in IMG/M
3300028489\|Ga0257112_10202472	Not Available	692	Open in IMG/M
3300028489\|Ga0257112_10234205	Not Available	632	Open in IMG/M
3300028535\|Ga0257111_1120369	Not Available	818	Open in IMG/M
3300028535\|Ga0257111_1234401	Not Available	536	Open in IMG/M
3300031757\|Ga0315328_10443756	Not Available	751	Open in IMG/M
3300031801\|Ga0310121_10018451	Not Available	5149	Open in IMG/M
3300031801\|Ga0310121_10036031	All Organisms → cellular organisms → Bacteria	3426	Open in IMG/M
3300031801\|Ga0310121_10163129	Not Available	1380	Open in IMG/M
3300031801\|Ga0310121_10256818	Not Available	1040	Open in IMG/M
3300031801\|Ga0310121_10528662	Not Available	649	Open in IMG/M
3300032048\|Ga0315329_10135414	Not Available	1272	Open in IMG/M
3300032048\|Ga0315329_10399906	Not Available	732	Open in IMG/M
3300032048\|Ga0315329_10746823	Not Available	515	Open in IMG/M
3300032130\|Ga0315333_10063608	All Organisms → Viruses → Predicted Viral	1671	Open in IMG/M
3300032130\|Ga0315333_10118989	All Organisms → Viruses → Predicted Viral	1235	Open in IMG/M
3300032278\|Ga0310345_10595737	Not Available	1064	Open in IMG/M
3300032278\|Ga0310345_11117020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium	771	Open in IMG/M
3300032278\|Ga0310345_11535775	Not Available	651	Open in IMG/M
3300032278\|Ga0310345_11735396	Not Available	609	Open in IMG/M
3300032360\|Ga0315334_10796790	Not Available	818	Open in IMG/M
3300032360\|Ga0315334_11231783	Not Available	646	Open in IMG/M
3300032360\|Ga0315334_11518575	Not Available	574	Open in IMG/M
3300032360\|Ga0315334_11636192	Not Available	549	Open in IMG/M
3300032360\|Ga0315334_11667593	Not Available	543	Open in IMG/M
3300032820\|Ga0310342_102095303	Not Available	677	Open in IMG/M
3300032820\|Ga0310342_102132174	Not Available	670	Open in IMG/M
3300032820\|Ga0310342_103591377	Not Available	511	Open in IMG/M
3300034695\|Ga0372840_123228	Not Available	775	Open in IMG/M
3300034695\|Ga0372840_140774	Not Available	721	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	73.08%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	19.23%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.88%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.88%
Strait	Environmental → Aquatic → Marine → Strait	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	48.08%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	20.19%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	19.23%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	4.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	21.15%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	20.19%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	19.23%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	18.27%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	8.65%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	4.81%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.88%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	2.88%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.92%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000152	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P12 500m	Environmental	Open in IMG/M
3300000181	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P4 500m	Environmental	Open in IMG/M
3300000264	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_500	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006091	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP125	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental	Open in IMG/M
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental	Open in IMG/M
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental	Open in IMG/M
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental	Open in IMG/M
3300021068	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300027699	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental	Open in IMG/M
3300028489	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000m	Environmental	Open in IMG/M
3300028535	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_500m	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031802	Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032130	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 34915	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M
3300034695	Seawater microbial communities from the Northeast subarctic Pacific Ocean - P26_June_2012_500m	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun08P12500mDRAFT_10520801	3300000152	Marine	NMKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEHLVGANNELMKELEQYEXVXMSEKV*
LPjun08P4500mDRAFT_10315291	3300000181	Marine	HQLIKKNNMKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI*
LP_A_09_P04_500DRAFT_10429761	3300000264	Marine	MKKLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMKVLEQYEKVSM
JGI24006J15134_1000344518	3300001450	Marine	MKELAALVYYKRIEDRMKEKYSKRIEYLVGANNELMKELEQYERVSMTEKV*
GBIDBA_100123257	3300001683	Hydrothermal Vent Plume	MKKHNSIFKTLAELCYNKSVREEIEERVASKYLSRIDYLVGANNELMKELEQYEKVSMKEKV*
GBIDBA_100597528	3300001683	Hydrothermal Vent Plume	MKRLTKNDSSKRLAALVYDKALREQIEERVNSKYLKRIEYLVGANNELMNELEQYERVSMAEKV*
GBIDBA_100709434	3300001683	Hydrothermal Vent Plume	NMKRLTKNDSTKRLAALVYDKALREHIEERVNSKYLKRIEYLVGANNELMKVLEQYETVGMSEKV*
Ga0066855_102895982	3300005402	Marine	MIKKRKHNSIFKTLAELVYNKAIREDIEKRVASKYLKRIDYLVGANNELMKELEQYESELVTVEKEKV*
Ga0066854_102411311	3300005431	Marine	MKNKSIFKPLAELVYNKAIREEMEARVTAKYLKRIDYLVGANNELMKELEQYEKVSMKEK
Ga0066368_102123922	3300006002	Marine	RNNSIFKTLAELVYNKAIREDIEKRIMAKYEKRIDYLVGANNELMKELEQYESELVTVEKEKV*
Ga0082018_10832281	3300006091	Marine	MKKLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMRELEQYERVSMSEKI*
Ga0068504_10608292	3300006304	Marine	MIPKKIRNNSIFKTLAELVYNKAIREDIEKRITAKYEKRINYLVGANNELMKELEQYEKVSIEEKV*
Ga0068470_15652643	3300006308	Marine	DFYLNMKRLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI*
Ga0068471_11674794	3300006310	Marine	MKKLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKV*
Ga0068471_12304364	3300006310	Marine	MNKTTLATLVYYKGLEERMREKYLKRIEYLVEANNELMRELEQYEKISMSEKV*
Ga0068471_12826315	3300006310	Marine	MNKITLAALVYYKGLREEIESKYLKRIEYLVEANNELMRELEQYEKVSMSEKV*
Ga0068471_12916235	3300006310	Marine	MIKKRKHNSIFKTLAELCYNKAIREDIEKRVASKYLKRIDYLVGANNELMKELEQYEKVSMEEKV*
Ga0068471_13098293	3300006310	Marine	MKNKSIFKPLAELVYNKAIREEMEARVTAKYLKRIDYLVGANNELMKELEQYEKVSMEEKV*
Ga0068471_13444234	3300006310	Marine	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEHLVGANNELMKELEQYETVGMSEKV*
Ga0068471_14941271	3300006310	Marine	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI*
Ga0068501_11011426	3300006325	Marine	MKKLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI*
Ga0068501_12254682	3300006325	Marine	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKVLEQYEKVSMSEKI*
Ga0068480_11839311	3300006335	Marine	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYEKVSM
Ga0068480_15290241	3300006335	Marine	MKKLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMRELEQYERVSMSEKV*
Ga0068502_114630824	3300006336	Marine	MKKLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMKVLEQYEKVSMSEKI*
Ga0068502_11481042	3300006336	Marine	MKRLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMRELEQYERVSMSEKI*
Ga0068502_129361611	3300006336	Marine	MKKLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI*
Ga0068502_14785454	3300006336	Marine	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEHLVGANNELMKELEQYEMF*
Ga0068482_14747962	3300006338	Marine	MMTPEHQQLATLVYDKALRKQIEERVESKYLKRIEYLVGANNELMKELEQYEKVSMSEKI
Ga0068481_11877081	3300006339	Marine	NNFKKNNMKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI*
Ga0068503_103899781	3300006340	Marine	MEKTAHLVYDKGLRAQIKEHYKAKYEQRINYLVGANNELMKELEQYEKVSMEEKV*
Ga0068503_105518041	3300006340	Marine	MIIKKRKHNSIFKTLAELVYNKAIREDIEKRVASKYLKRIDYLVGANNELMKELEQYEKVSMEEKV*
Ga0068493_101652758	3300006341	Marine	MTNNNLAHLVYIKGLRAQIKEHYRAKYEQRIEYLVGANNELMKELEQYERVSMSEKI*
Ga0099697_14306752	3300006347	Marine	MKKRNNSIFKTLAELVYNKAIREDIEKRITAKYEKRINYLVRANNELMKELEQCELECYGRGV*
Ga0066372_101646113	3300006902	Marine	MNKQYIKKNMKKLPNRKHTKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSLSEKI*
Ga0066372_104514652	3300006902	Marine	MKRLPNKKHTKRLATLIYDKALREQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI*
Ga0066367_11366282	3300007291	Marine	MNKNRLAALVYYKGLEEKMREKYLKRIEYLVEANNELMRELEHYEKVSMSEKV*
Ga0114996_100803137	3300009173	Marine	MKKKRDSNTKPLAELVYEKAIREEIELSITSKYEKRIEYLVGANNELMKELEQYERVSMQEKV*
Ga0114996_101705726	3300009173	Marine	MKNNTIFKSLAELCYNKAIRKEIEKRITSKYLKRIDYLVGANNELMKELEQYERVSMKEKV*
Ga0114996_106101052	3300009173	Marine	MKNKNNSTLFKPLAELVYNKAIREEIEARITAKYLKRIDYLVGANNELMQELEQ*
Ga0114993_104865902	3300009409	Marine	MKNKNNSTLFKPLAELVYNKAIREEIEARITAKYLKRIDYLVGANNELMQELEQWERVGERLEKATT*
Ga0115007_112219072	3300009441	Marine	MKETSTELAALVYYKRIEDRMKEKYSERIEYLVDANNELMRELEQYERVSMTEKI*
Ga0181432_11282834	3300017775	Seawater	MKNKSIFKSLAELCYAKAIREETEKRITAKYLKRIDYLVGCNNELMKELEQYEKVSMAEK
Ga0181432_12114191	3300017775	Seawater	MKKLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMRELEQYERVSMSEKI
Ga0211623_101099343	3300020399	Marine	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYINRIEHLVGANNELMRELEQYEMVSMSEKV
Ga0211578_104423084	3300020444	Marine	MKKLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMKVLEQYEKVSMSEKI
Ga0211697_101925803	3300020458	Marine	MKYNKQKKEHKSLAELVYHKAIREQIEKRITEKYSKRIDYLVGSNNELMKEIEQYERVSMQEKV
Ga0206686_11499752	3300021065	Seawater	MKKLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI
Ga0206684_12869622	3300021068	Seawater	MKRLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMRELEQYERVSMSEK
Ga0206678_102473252	3300021084	Seawater	MKRLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMRELEQYERVSMSEKI
Ga0206679_102220032	3300021089	Seawater	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMRELEQYERVSMSEKI
Ga0206679_103650952	3300021089	Seawater	MKNKSIFKSLAELCYAKAIREETEKRITAKYLKRIDYLVGCNNELMKELEQYERVSMKET
Ga0206680_101076705	3300021352	Seawater	MKNKSIFKSLAELCYAKAIREETEKRITAKYLKRIDYLVGCNNELMKELEQYERVSMN
Ga0206685_103529412	3300021442	Seawater	DSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI
Ga0206681_100721423	3300021443	Seawater	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI
Ga0206681_100762024	3300021443	Seawater	MKNKSIFKSLAELCYAKAIREETEKRITAKYLKRIDYLVGCNNELMKELEQYEKVSMTEK
Ga0209337_11139511	3300025168	Marine	LVYYKRIEDRMKEKYSKRIEYLVGANNELMKELEQYERVSMTEKV
Ga0209337_11407075	3300025168	Marine	LVYYKRIEDRMKEKYSKRIEYLVGANNELMKELEQYERVSMTEKI
Ga0209337_12415841	3300025168	Marine	MKELAALVYYKRIEDRMKEKYSKRIEYLVGANNELMKELEQYERVSM
Ga0209752_10450705	3300027699	Marine	MKRLPNKKHTKRLATLIYDKALREQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI
Ga0209035_103070161	3300027827	Marine	MKETSAELAALVYYKRIEDRMKEKYSERIEYLVDANNELMRELEQYERVSMTEKV
Ga0209035_103313831	3300027827	Marine	SAELAALVYYKRIEDRMKEKYSERIEYLVDANNELMRELEQYERVSMTEKV
Ga0209089_100231537	3300027838	Marine	MKNNTIFKSLAELCYNKAIRKEIEKRITSKYLKRIDYLVGANNELMKELEQYERVSMKEK
Ga0209089_104817532	3300027838	Marine	MKNKNNSTLFKPLAELVYNKAIREEIEARITAKYLKRIDYLVGANNELMQELEQWERVGERLEKATT
Ga0209501_104817902	3300027844	Marine	MKNKNNSTLFKPLAELVYNKAIREEIEARITAKYLKRIDYLVGANNELMQELEQ
Ga0257108_10592583	3300028190	Marine	MKILTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEHLVGANNELMKELEQYETVGMSEKI
Ga0257108_10991773	3300028190	Marine	MKRLTKNDSSKRLAILVYDKALREQIEERVNSKYLKRIEYLVGANNGLMNELEQYERVSMAEKV
Ga0257108_11597513	3300028190	Marine	MKKINNTIFKTLAELCYNKAIREDIEKRITAKYEKRINYLVGANNELMKELEQYEKVSMEEKV
Ga0257107_11040612	3300028192	Marine	MKYNKQKKGHKSLAELVYNKAIREQIMNHYKSKYEKRINYLVEANNELMKELEQYERVSMQERV
Ga0257107_11399801	3300028192	Marine	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYETVGMSEKV
Ga0257107_11592412	3300028192	Marine	MKKKRNSNTKPLAELVYNKAIREEIEMSITSKYEKRIEYLVGANNELMKELEQYEKVSMQEKV
Ga0257113_10564621	3300028488	Marine	MRIKNMKKRRHNSIFKTLAELCYNKAMKEDIEKRITAKYEKRIDYLVGANNELMKELEQYESEI
Ga0257113_10917361	3300028488	Marine	MIPKKRNNSIFKTLAELVYNKAIREDIEKRITAKYEKRIDYLVGANNELMKELEQYEKVSIEE
Ga0257112_101488243	3300028489	Marine	KNNMKRLTKNDSSKRLAALVYDKALRKQIEESVKSKYIKRIEYLVGANNELMKELEQYETIGMVEKV
Ga0257112_102024723	3300028489	Marine	MKKKRDSNTKPLAELVYNKAIREEIEMSITSKYEKRIEYLVGANNELMKELEQYEKVSMQEKV
Ga0257112_102342051	3300028489	Marine	MKILTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMNELEQYEKVSMSEKV
Ga0257111_11203693	3300028535	Marine	MKYNKQKKGHKSLAELVYNKAIREQIMDHYKSKYEKRINYLVGANNELMKELEQYERVSMQERV
Ga0257111_12344013	3300028535	Marine	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEHLVGANNELMKELEQYETVGMSEKI
Ga0315328_104437562	3300031757	Seawater	MKNKSIFKSLAELCYAKAIREETEKRITAKYLKRIDYLVGCNNELMKELEQYERVSMNEK
Ga0310121_100184518	3300031801	Marine	MKKKVKNNSIFKSLAELCYNKAMREDIEKRITAKYEKRINYLVGANNELMKELEQYERRK
Ga0310121_1003603110	3300031801	Marine	MKYNKQKKEHKSLAELVYHKAIREQIEKRITEKYLKRIDYLVGSNNELMKEIEQYERVSMQERV
Ga0310121_101631293	3300031801	Marine	MNKQRKERHYISSEMKPLAELVYNKAIREQIEKRITIKYSKRIDHLVGANNELMKELEQWERVGKRLEKVTTNEK
Ga0310121_102568182	3300031801	Marine	MKKKNSSTKPLAELVYNKAIREEIEKRITEKYSKRIDYLVGSNNELMKEIEQYERVSMQERV
Ga0310121_105286622	3300031801	Marine	MKKIRNNTTKSLAKLVYNKAIREEIEERVKAKYLKRIDYLVGANNELMRELEQWERVGERLEKGIQKNAST
Ga0310123_105890682	3300031802	Marine	MNKQRKERHYISSEMKPLAELVYNKAIREQIEKRITTNYLKRIDHLVGANNELMKELEQWERVGKRLEKVTTNEK
Ga0315329_101354143	3300032048	Seawater	KKMKNKSIFKSLAELCYAKAIREETEKRITAKYLKRIDYLVGCNNELMKELEQYESELVTVEKEKV
Ga0315329_103999062	3300032048	Seawater	KLQLLQKNNMKNKSIFKSLAELCYAKAIREETEKRITAKYLKRIDYLVGCNNELMKELEQYERVSMKETV
Ga0315329_107468232	3300032048	Seawater	MINNLAHLVYNKGIREQIKEHYKEKYEQRIDYLVGANNELMKELEQYEKVSMAEKV
Ga0315333_100636082	3300032130	Seawater	MKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMRELEQYERVGMSEKV
Ga0315333_101189893	3300032130	Seawater	MINNDNLAHLVYNKALKAQIKEHYRAKYEQRINYLVGANNELMRELEQYEKVSMSEKV
Ga0310345_105957374	3300032278	Seawater	MNKQRRKINNISDVDQKHLAELVYHKAIKEEIEKRLEIKYLKRIGYLVNANNELMKELEQYERVSMQERV
Ga0310345_111170201	3300032278	Seawater	MNKITLAALVYYKGLREEIESKYLKRIEYLVEANNELMRELEQYEKVSMSEKV
Ga0310345_115357752	3300032278	Seawater	MKEYTTLATLVYYKGLEEKMKEKYLKRIEYLVGANNELMKELEQYEKVGMSEKV
Ga0310345_117353963	3300032278	Seawater	MIKKRKHNSIFKSLAELVYNKAIREDVEKRITAKYEKRINYLVGANNELMKELEQYEKVSMEEKVXNPRPTYIIFVPYI
Ga0315334_107967901	3300032360	Seawater	AELCYAKAIREETEKRITAKYLKRIDYLVGCNNELMKELEQYESELVTVEKEKV
Ga0315334_112317833	3300032360	Seawater	MKKNKNTKENTKSLAELVYNKAIREEIEERITSKYLKRIDYLVGANNELMKELEQYEK
Ga0315334_115185752	3300032360	Seawater	MKKRKNNSIFKPLAELIYNKAIREEMEARVTAKYLKRIDYLVGANNELMKELEQYEKVSMAEKV
Ga0315334_116361921	3300032360	Seawater	LTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEK
Ga0315334_116675931	3300032360	Seawater	KKNNMKRLTKNDSSKRLAALVYDKALREQIEERVKSKYIKRIEYLVGANNELMRELEQYERVSMSENI
Ga0310342_1020953032	3300032820	Seawater	MKNTTTLAQLVYDKGLRAQIKEHYKAKYQQRINYLVGANNQLMRELEQYEKVSMAEKV
Ga0310342_1021321743	3300032820	Seawater	DSSKRLASLVYDKALREQIEERVKSKYIKRIEYLVGANNELMKVLEQYEKVSMSEKI
Ga0310342_1035913772	3300032820	Seawater	KRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI
Ga0372840_123228_524_718	3300034695	Seawater	MKRLTKNDSSKRLAALVYDKALREQIEERVNSKYLKRIEYLVGANNELMNELEQYERVSMAEKV
Ga0372840_140774_501_695	3300034695	Seawater	MKKTRNNTTKPLAELVYNKAIREEIEERVRDRYLKRINYLVGANNELMQELEQYEKVSMSEKII

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097522

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences