Sample 3300000181

3300000181: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P4 500m

Overview

Basic Information
IMG/M Taxon OID	3300000181 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0046785 \| Gp0054028 \| Ga0026207
Sample Name	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P4 500m
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	110583281
Sequencing Scaffolds	81
Novel Protein Genes	87
Associated Families	83

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses	1
All Organisms → Viruses → Predicted Viral	6
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3
Not Available	55
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED197	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	3
All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter smithii	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine → Marine Microbial Communities From Expanding Oxygen Minimum Zones In The Northeastern Subarctic Pacific Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine aphotic zone → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	P4, Pacific Ocean
Coordinates	Lat. (^o)	48.65	Long. (^o)	-126.666667	Alt. (m)	N/A	Depth (m)	500
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F001620	Metagenome / Metatranscriptome	662	Y
F001625	Metagenome / Metatranscriptome	661	Y
F001756	Metagenome / Metatranscriptome	641	Y
F001930	Metagenome	615	Y
F002874	Metagenome / Metatranscriptome	524	Y
F003122	Metagenome / Metatranscriptome	506	Y
F003285	Metagenome / Metatranscriptome	496	Y
F004643	Metagenome / Metatranscriptome	429	Y
F005103	Metagenome / Metatranscriptome	412	Y
F005336	Metagenome / Metatranscriptome	404	Y
F005571	Metagenome / Metatranscriptome	396	Y
F006640	Metagenome / Metatranscriptome	368	Y
F007052	Metagenome / Metatranscriptome	359	Y
F007053	Metagenome / Metatranscriptome	359	Y
F007774	Metagenome / Metatranscriptome	345	Y
F007946	Metagenome / Metatranscriptome	342	Y
F008084	Metagenome / Metatranscriptome	339	Y
F008625	Metagenome / Metatranscriptome	330	Y
F009921	Metagenome / Metatranscriptome	311	Y
F010197	Metagenome	307	Y
F011520	Metagenome	290	Y
F011704	Metagenome / Metatranscriptome	288	Y
F016055	Metagenome / Metatranscriptome	250	Y
F016411	Metagenome	247	Y
F016675	Metagenome / Metatranscriptome	245	Y
F016731	Metagenome / Metatranscriptome	245	Y
F016996	Metagenome / Metatranscriptome	243	N
F017718	Metagenome / Metatranscriptome	239	Y
F017906	Metagenome	238	Y
F018452	Metagenome	235	Y
F018553	Metagenome / Metatranscriptome	234	Y
F020712	Metagenome	222	Y
F020717	Metagenome / Metatranscriptome	222	Y
F021319	Metagenome	219	N
F021858	Metagenome / Metatranscriptome	217	Y
F022749	Metagenome / Metatranscriptome	213	Y
F025055	Metagenome	203	Y
F025858	Metagenome / Metatranscriptome	200	Y
F026589	Metagenome / Metatranscriptome	197	Y
F026708	Metagenome / Metatranscriptome	197	Y
F031254	Metagenome / Metatranscriptome	183	Y
F032311	Metagenome / Metatranscriptome	180	Y
F033080	Metagenome	178	Y
F034336	Metagenome / Metatranscriptome	175	N
F034338	Metagenome / Metatranscriptome	175	Y
F034993	Metagenome	173	Y
F035075	Metagenome / Metatranscriptome	173	Y
F036742	Metagenome / Metatranscriptome	169	N
F038406	Metagenome / Metatranscriptome	166	Y
F043448	Metagenome / Metatranscriptome	156	Y
F049215	Metagenome / Metatranscriptome	147	N
F049706	Metagenome / Metatranscriptome	146	Y
F049927	Metagenome	146	Y
F054935	Metagenome / Metatranscriptome	139	N
F059074	Metagenome	134	N
F064788	Metagenome	128	Y
F064789	Metagenome / Metatranscriptome	128	N
F065937	Metagenome / Metatranscriptome	127	N
F066850	Metagenome	126	Y
F067095	Metagenome / Metatranscriptome	126	Y
F067826	Metagenome / Metatranscriptome	125	Y
F070936	Metagenome / Metatranscriptome	122	Y
F080484	Metagenome	115	N
F082825	Metagenome / Metatranscriptome	113	N
F083231	Metagenome / Metatranscriptome	113	Y
F084346	Metagenome / Metatranscriptome	112	Y
F087318	Metagenome	110	N
F092216	Metagenome	107	Y
F092225	Metagenome	107	N
F092360	Metagenome / Metatranscriptome	107	Y
F094003	Metagenome	106	Y
F094004	Metagenome	106	Y
F094606	Metagenome	106	Y
F096068	Metagenome / Metatranscriptome	105	N
F097522	Metagenome	104	Y
F097523	Metagenome	104	Y
F097667	Metagenome / Metatranscriptome	104	N
F099541	Metagenome	103	Y
F101332	Metagenome / Metatranscriptome	102	N
F101334	Metagenome / Metatranscriptome	102	Y
F101337	Metagenome	102	N
F101354	Metagenome	102	N
F105359	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
LPjun08P4500mDRAFT_c1000213	All Organisms → Viruses	8725	Open in IMG/M
LPjun08P4500mDRAFT_c1001509	All Organisms → Viruses → Predicted Viral	4042	Open in IMG/M
LPjun08P4500mDRAFT_c1002018	All Organisms → Viruses → Predicted Viral	3545	Open in IMG/M
LPjun08P4500mDRAFT_c1002065	All Organisms → Viruses → Predicted Viral	3510	Open in IMG/M
LPjun08P4500mDRAFT_c1003820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2591	Open in IMG/M
LPjun08P4500mDRAFT_c1004100	Not Available	2501	Open in IMG/M
LPjun08P4500mDRAFT_c1004322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2429	Open in IMG/M
LPjun08P4500mDRAFT_c1004337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2425	Open in IMG/M
LPjun08P4500mDRAFT_c1009258	Not Available	1586	Open in IMG/M
LPjun08P4500mDRAFT_c1010157	Not Available	1497	Open in IMG/M
LPjun08P4500mDRAFT_c1011136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1412	Open in IMG/M
LPjun08P4500mDRAFT_c1012245	Not Available	1327	Open in IMG/M
LPjun08P4500mDRAFT_c1012466	All Organisms → Viruses → Predicted Viral	1313	Open in IMG/M
LPjun08P4500mDRAFT_c1012573	Not Available	1306	Open in IMG/M
LPjun08P4500mDRAFT_c1012804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1291	Open in IMG/M
LPjun08P4500mDRAFT_c1013147	Not Available	1270	Open in IMG/M
LPjun08P4500mDRAFT_c1013360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1256	Open in IMG/M
LPjun08P4500mDRAFT_c1013630	Not Available	1240	Open in IMG/M
LPjun08P4500mDRAFT_c1014218	Not Available	1206	Open in IMG/M
LPjun08P4500mDRAFT_c1014521	Not Available	1190	Open in IMG/M
LPjun08P4500mDRAFT_c1014589	Not Available	1185	Open in IMG/M
LPjun08P4500mDRAFT_c1014775	All Organisms → Viruses → Predicted Viral	1174	Open in IMG/M
LPjun08P4500mDRAFT_c1014826	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
LPjun08P4500mDRAFT_c1015110	All Organisms → cellular organisms → Bacteria → Proteobacteria	1156	Open in IMG/M
LPjun08P4500mDRAFT_c1015116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1156	Open in IMG/M
LPjun08P4500mDRAFT_c1016098	Not Available	1108	Open in IMG/M
LPjun08P4500mDRAFT_c1016307	Not Available	1099	Open in IMG/M
LPjun08P4500mDRAFT_c1017066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. IMCC9063	1066	Open in IMG/M
LPjun08P4500mDRAFT_c1018294	Not Available	1019	Open in IMG/M
LPjun08P4500mDRAFT_c1018378	Not Available	1015	Open in IMG/M
LPjun08P4500mDRAFT_c1019287	Not Available	981	Open in IMG/M
LPjun08P4500mDRAFT_c1019941	Not Available	958	Open in IMG/M
LPjun08P4500mDRAFT_c1020573	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED46	937	Open in IMG/M
LPjun08P4500mDRAFT_c1022774	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	873	Open in IMG/M
LPjun08P4500mDRAFT_c1023563	Not Available	853	Open in IMG/M
LPjun08P4500mDRAFT_c1023693	Not Available	850	Open in IMG/M
LPjun08P4500mDRAFT_c1023749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	849	Open in IMG/M
LPjun08P4500mDRAFT_c1024695	Not Available	826	Open in IMG/M
LPjun08P4500mDRAFT_c1025102	Not Available	817	Open in IMG/M
LPjun08P4500mDRAFT_c1025288	Not Available	812	Open in IMG/M
LPjun08P4500mDRAFT_c1025557	Not Available	806	Open in IMG/M
LPjun08P4500mDRAFT_c1025663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED197	804	Open in IMG/M
LPjun08P4500mDRAFT_c1027076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Lambdaproteobacteria → Candidatus Lambdaproteobacteria bacterium	775	Open in IMG/M
LPjun08P4500mDRAFT_c1027353	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	771	Open in IMG/M
LPjun08P4500mDRAFT_c1029277	Not Available	735	Open in IMG/M
LPjun08P4500mDRAFT_c1029515	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	731	Open in IMG/M
LPjun08P4500mDRAFT_c1030028	Not Available	722	Open in IMG/M
LPjun08P4500mDRAFT_c1030195	Not Available	720	Open in IMG/M
LPjun08P4500mDRAFT_c1031529	Not Available	698	Open in IMG/M
LPjun08P4500mDRAFT_c1031614	Not Available	697	Open in IMG/M
LPjun08P4500mDRAFT_c1032413	Not Available	685	Open in IMG/M
LPjun08P4500mDRAFT_c1032544	Not Available	683	Open in IMG/M
LPjun08P4500mDRAFT_c1032698	Not Available	681	Open in IMG/M
LPjun08P4500mDRAFT_c1033275	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	673	Open in IMG/M
LPjun08P4500mDRAFT_c1033326	Not Available	672	Open in IMG/M
LPjun08P4500mDRAFT_c1034290	Not Available	659	Open in IMG/M
LPjun08P4500mDRAFT_c1035585	Not Available	642	Open in IMG/M
LPjun08P4500mDRAFT_c1035685	Not Available	641	Open in IMG/M
LPjun08P4500mDRAFT_c1036832	Not Available	628	Open in IMG/M
LPjun08P4500mDRAFT_c1037419	Not Available	621	Open in IMG/M
LPjun08P4500mDRAFT_c1038285	Not Available	612	Open in IMG/M
LPjun08P4500mDRAFT_c1039403	Not Available	601	Open in IMG/M
LPjun08P4500mDRAFT_c1040699	Not Available	588	Open in IMG/M
LPjun08P4500mDRAFT_c1041384	Not Available	581	Open in IMG/M
LPjun08P4500mDRAFT_c1041652	Not Available	579	Open in IMG/M
LPjun08P4500mDRAFT_c1042133	All Organisms → cellular organisms → Archaea → Euryarchaeota → Methanomada group → Methanobacteria → Methanobacteriales → Methanobacteriaceae → Methanobrevibacter → Methanobrevibacter smithii	575	Open in IMG/M
LPjun08P4500mDRAFT_c1044376	Not Available	556	Open in IMG/M
LPjun08P4500mDRAFT_c1044696	Not Available	553	Open in IMG/M
LPjun08P4500mDRAFT_c1045961	Not Available	543	Open in IMG/M
LPjun08P4500mDRAFT_c1047992	Not Available	529	Open in IMG/M
LPjun08P4500mDRAFT_c1048433	Not Available	526	Open in IMG/M
LPjun08P4500mDRAFT_c1049664	Not Available	517	Open in IMG/M
LPjun08P4500mDRAFT_c1049933	Not Available	515	Open in IMG/M
LPjun08P4500mDRAFT_c1050118	Not Available	514	Open in IMG/M
LPjun08P4500mDRAFT_c1050871	Not Available	509	Open in IMG/M
LPjun08P4500mDRAFT_c1051339	Not Available	506	Open in IMG/M
LPjun08P4500mDRAFT_c1051798	Not Available	503	Open in IMG/M
LPjun08P4500mDRAFT_c1051803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
LPjun08P4500mDRAFT_c1051940	Not Available	503	Open in IMG/M
LPjun08P4500mDRAFT_c1052388	Not Available	500	Open in IMG/M
LPjun08P4500mDRAFT_c1052446	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
LPjun08P4500mDRAFT_c1000213	LPjun08P4500mDRAFT_10002131	F066850	SHGQFADSSGSEGATADIYIIGNSNRLHTSSYGTGNYQLHDIIGSSNILDIHSSYTSADTDPYGDTMLILGDGNYLRTYISGDSNTIRLHMAGGNNTAKIYLYTDGSVINFDQTGGGNTGQVTISGDSIYDYTLNFAQNGSDSCTYSFNRNTQSADVTATVSNGC*
LPjun08P4500mDRAFT_c1001509	LPjun08P4500mDRAFT_10015095	F025055	MSYFRNSAGDKKIVKATYSDSQMIEVLGDTVKKIFNYEGEDNITFLKNEVFWLNYLKSKWVPELLEVGKNYVITSYYGPDLTKVHHLSRPKDLANQTLEMYRFFKDKNVFKLNGALRNMTLNKGQLVAFDFKHARFRTNKYIDYEIVSYEKWLSKIDNELVEKLKLLI*
LPjun08P4500mDRAFT_c1002018	LPjun08P4500mDRAFT_10020187	F043448	LIDHKGANSMSDCLKTKREVEKKWRNKSEETDSVEINGITYKIDGESLAFMCDLVDARVHHYNDGTWEIVEILGKHKKEE*
LPjun08P4500mDRAFT_c1002065	LPjun08P4500mDRAFT_10020651	F067826	VSGYSIINRYNDNHRAYLKIETADEADVQIVQDSEAQHLDVGSSSSQQNITIIQTD*
LPjun08P4500mDRAFT_c1002705	LPjun08P4500mDRAFT_10027052	F094606	LLATSKETPFTTPEFNDQSVLLISVENIIDKPRIPTTAPNKIGHLIGFLKNKNPLNTVNKVSVEKIRATIPETK*
LPjun08P4500mDRAFT_c1003820	LPjun08P4500mDRAFT_10038202	F038406	MKGAIMNKTVNNLPFVYASQTYKKIGAYGAVTAIAFIIVMLLVLYAPEIPTIGEGMGLDYNLVP*
LPjun08P4500mDRAFT_c1004100	LPjun08P4500mDRAFT_10041004	F001620	MDAATLVTIITMFIVTDTSSEFVKYDGLMDCLKDKRKIEKLHDGRRVICGPSMAEIDKDGNIISIKNKMPDQSGSLKXGGTAKSLTEKKKKKKIKVLTQD*
LPjun08P4500mDRAFT_c1004322	LPjun08P4500mDRAFT_10043224	F049927	KAVGNVDKDFIEVICDPTIPLKKTVIILAVNPKT*
LPjun08P4500mDRAFT_c1004337	LPjun08P4500mDRAFT_10043371	F097667	LKIKYIVIAIVTIISPAIVNHFAASFSINLLKVSPNLNDKYETTKNRNPLDTKQTIKNIKILKPIIPLVMVNTLKGS
LPjun08P4500mDRAFT_c1006137	LPjun08P4500mDRAFT_10061371	F101334	ERIVGTKSKATLAEAFKLAFAEKYNVKREEIKQGIVDKVYNKEKVEK*
LPjun08P4500mDRAFT_c1009258	LPjun08P4500mDRAFT_10092582	F005571	MIKSLEERIVNLTKVTTDNVETTVEAELRQLEMKGGIPIQVSVVLAKEDDFQFTMDWNSTMSKFSTTLDGIKWYSDFDYSLYSPKLWETGNIARAPRRGRNSPI*
LPjun08P4500mDRAFT_c1010157	LPjun08P4500mDRAFT_10101575	F101337	MLEILIFGLVVFAAICLWVLIEERKSPKFLVWFIPLFLVLVTSTYLTYTSILGYPKEGIPKKGIYLKHYIDEPDWVYIWVLSEDNIPMGYKLVYSRAVHNSLLGVQGKANEGKFMVLGEDENAMGSIGEQEEQGEESRGGFTVGGDISFYEWDYSAAMPPKSTINERNR*
LPjun08P4500mDRAFT_c1011136	LPjun08P4500mDRAFT_10111361	F020717	MTRKQSEILMSISIVAFTRFLALLETTQCWDFLRPHHILHENKDIRCFQDLNEQKDISISALKLMLSEN*
LPjun08P4500mDRAFT_c1012245	LPjun08P4500mDRAFT_10122451	F101332	LPPMTHNDWTYKTEDQCMMNGYYRIAEVAETYMKTVGVQQFKDMRVRMMYSCLTEDAWNKSTEPKGEESTFKLPV*
LPjun08P4500mDRAFT_c1012466	LPjun08P4500mDRAFT_10124662	F034993	YLTEFAIQSTSDYVFNTGTNSSGLMIPXSGPMFKXIWPNTIRATVFHATDADHLAGLKRLEGGKKSISAFFSMMANQMEGGIATDGGVVIEMDADILVSAKDDIMSTVDKTGRRWVEMSWFENAQSWGNPAGFDKVERGLNTLIKTLVNKHLPKDITKGEHEYELWGNMKSHLKAGREGGGKRLNLVIKDYFDGVEKVIKQNKKVFETIFYGYAKSKRQTDNAWDEQIVNNIKIKKVHILSDEVDLDGLHDMYPKGLVHEFPDVKFWDYSSELEIYTREVVKKEIGR*
LPjun08P4500mDRAFT_c1012573	LPjun08P4500mDRAFT_10125732	F022749	MKTKFEEYVEQVDSLIRDFTKKLHITELDLIAESIEDSPAGTGRMDFWLEDIVDSEQISRKSASDMSEPVAGI*
LPjun08P4500mDRAFT_c1012804	LPjun08P4500mDRAFT_10128041	F007052	MEKNETYFVARLIKKGKFLSSEIFESLEEARLWAMKESKLLISDLEMLRSTNVGDICVEIDKHFFGYEISSEELLNHSSRVYI*
LPjun08P4500mDRAFT_c1013147	LPjun08P4500mDRAFT_10131474	F034338	EMTNYDVDARERQERIERFEHAINCMDIAPVSMMAFERIALEHKVSLVGLLQTMLLNALDRELSRKQDVQLEFSFTDDHYG*
LPjun08P4500mDRAFT_c1013360	LPjun08P4500mDRAFT_10133603	F026708	TARKPTKNRTELKVNGPILSIPVSWAMNVVPQIKVQATKQTNDIVFFIS*
LPjun08P4500mDRAFT_c1013630	LPjun08P4500mDRAFT_10136303	F097523	ICATDAGIMSDIIESGYDGQCYFTHNSWNLLPEEAYDSLANGTEHTTYRRFDSEYFVYISGLAANCIXTKSYIIWVPKGMENKIKNIGEEVLEWSTGTSALHIACRDFTCNDYEKVYLLGFDHHNNYYDNIYTDTEHYFSKDSKRVDGWKSEYNNWDKQIFKVIXEHPALQFIWINYRGDDFPKLPNLFSKDETEIWQA*
LPjun08P4500mDRAFT_c1014218	LPjun08P4500mDRAFT_10142181	F001930	FKGYLKEDAPAWQSSTSQKIFDFGQISYMQIPLTSSTMEWIFQVQIPRATVFHVTNGIGLEKLKRLQNKKKSISAFFNMDAGTMEHGIQGGGGLVVELDANIIMSSKGDLMSMPDKTGRRWVELMNIDKKKTMHKELEQMLIDIAIKHDPKTKELIKIEPDIGLGAWWHLRENFKDNKKVMSLIIADYIDGVNAILKKHKKDIQGAVHGYYVRRGTVAVKHPSGRMVGGDSELSEWNVYDEQVVDKIKIIKVHTFNSRQFELDWVKDSVIPRLGKIPHTHWVNGARDLSNYVTKIAQTEVQALRRSKG*
LPjun08P4500mDRAFT_c1014521	LPjun08P4500mDRAFT_10145212	F021858	MININKFENRIVNFKRISEGVETTKEAELRRIDYDKSSALPRSVTARFVEPLNAVITLDYDKNTKTFRGPLGPDILESDFDITAFIKSSQLGSGNEVVVRSPKRNRPKF*
LPjun08P4500mDRAFT_c1014589	LPjun08P4500mDRAFT_10145892	F092225	MSKFTVSLLLLVFLNACGMTAPAFLATSTGAYSEYKVMSIIKTGTDFTLSLAKLPTTNDMVLSRITGYECKVSRALKQGIEYICRDVTIHPPENGKVNIDNKKEK*
LPjun08P4500mDRAFT_c1014775	LPjun08P4500mDRAFT_10147752	F049215	LITCVAYLVSCTEPMKYVTRELTIWNKYVSNGYDNYDDEIEVNLKLGSRDWFWLYDSGDRVKIYNNSSYTWQFEFSEDFDSLYVHARFYYTKDLIIELVVADTALRMDSDKTLMFWNCGDTTVVEYPFPACFTEVDSL*
LPjun08P4500mDRAFT_c1014826	LPjun08P4500mDRAFT_10148262	F084346	MTFHTTIPRYQVETSNEQFQSPTKKQAEDIYQKYVNQKIPCELFLNGELQKEFKPL*
LPjun08P4500mDRAFT_c1014826	LPjun08P4500mDRAFT_10148264	F016675	FETTVPPWHTGHEKYEAEDLATAKMMFRSKHEAARIFKVAEVLYDERTQRLNVI*
LPjun08P4500mDRAFT_c1015110	LPjun08P4500mDRAFT_10151103	F006640	MIELLIFGLVLLSVICLWLLIEGRKSPKFLVWFIPLVLILVSSTYVTYTSILGYPRIAKPKEGLYLKHYIDEPNWIYLWVVYKDKIPMSYQL
LPjun08P4500mDRAFT_c1015116	LPjun08P4500mDRAFT_10151163	F001756	LILGLNIPKKKLCPKLEKNVNIKPNIITFKLKLLNIFFYDL*
LPjun08P4500mDRAFT_c1016098	LPjun08P4500mDRAFT_10160982	F016055	MEEELHIEKHGSLRKSKRLINXRERLQIKKYLRGDSPEDFVDENDDADDIEYEEISYKN*
LPjun08P4500mDRAFT_c1016307	LPjun08P4500mDRAFT_10163073	F018553	MLCIPRLRIAILNEEIALWEERLRDNPDDIPYLGYIRETMKSRIKELEESEREGEQ*
LPjun08P4500mDRAFT_c1017066	LPjun08P4500mDRAFT_10170663	F001756	DSSFLILGLNIPKKKLCPKLEKNVNIKPNIITFKLKLLNIFFYDL*
LPjun08P4500mDRAFT_c1018294	LPjun08P4500mDRAFT_10182942	F083231	MPSKDGKIFDNIVYIGLGVNGLTALYLLLMYFDII*
LPjun08P4500mDRAFT_c1018378	LPjun08P4500mDRAFT_10183782	F105359	MNNIDKIAKLIATLDNDGLNKIIPIFKQHRKTLAMATKLDLKVGMKVSWGAMGHGVVDKINRTKCVCTRNDGQKWTIPM
LPjun08P4500mDRAFT_c1019287	LPjun08P4500mDRAFT_10192871	F016731	MGMAISLILNSCAKNVADKNNDLGSGDKSNLPISLTSLIEHAEYCKSIYDLGGDQQDEVAFEVIQDNGISIIVIRGTANTSN
LPjun08P4500mDRAFT_c1019941	LPjun08P4500mDRAFT_10199411	F049706	NKMKFKEDHPYMIRLDEVLKQYSVVKVADDNGAHHGADFEEMKQVILDALFTSYLGETIRK*
LPjun08P4500mDRAFT_c1020573	LPjun08P4500mDRAFT_10205732	F007053	MANSIINSQGRSVLHIDTTDGAITLAELKATNEATVVSADIVDIYWQTATSITIDXGGTAVHAFTGTGHWNLGQSGAVLSGTNTADLGITVSGDSYAVIIVHKQYSGG*
LPjun08P4500mDRAFT_c1020573	LPjun08P4500mDRAFT_10205734	F009921	MSELPDMISALVDDNKIDAETHFKNSMAQKIGSALDLKRVEVANSLIKGQSNTSVEDSADEEV*
LPjun08P4500mDRAFT_c1022774	LPjun08P4500mDRAFT_10227741	F021319	MNCEVGAARFIEIPSATTINGTKIRPPPIPNRLDIIPAKKLAPAEKTSKRRDTSMGFSSIFLLRNMYDAEEIRTSANKILKISGDISEDMNAPSIVPGTAIKPSFQPSESSIRFCLAYIAVEATELLNTANRLLLTANVGENPMNVNTGTIIIPPPKPIID
LPjun08P4500mDRAFT_c1023563	LPjun08P4500mDRAFT_10235632	F087318	MGISVHVYETVDEYVLRNKHNISDKLEVNEAALSLLDIWITPDDKLMVVCNCENFFDRPDVSRSISCFQKNNIHKYLKGDEKLVKYDDVEFDPKTENIQFFKKRLRKAPIFFRVGRFWGNKPRKTMKIDWSKKFFNIKLNRIEFILFDPKTISINLKPKRKGEGYKIDSKGNIGKKTSKNDMGIPKNRG*
LPjun08P4500mDRAFT_c1023693	LPjun08P4500mDRAFT_10236931	F094004	MKSFQQHLKEEVAWQQSTSKMIFDFGQIGNMKIPLSSKMMTWIFNVQLPRVTVFHVTNGVGLGNLKKLQNKKKSISAFFNMNADYIDQGIKTAGGVVAELDANILMSSKNDILSMPDKAGRRWVELHNIDTDEKMHPEFEKMLIDLAIKHDPRNKEYLKTVPEIGIGVWYKLQTDLKTNFDPAKAGKKLAFIIADYMNGVAAILKKHKNDIQGKVHGYIVRRGTLAVKHPSGRMVGGD
LPjun08P4500mDRAFT_c1023749	LPjun08P4500mDRAFT_10237492	F035075	YDNAISVKYVNKKNQRRLWGTPKNIEAVEKWVLKKEELEKKIRKNKNQ*
LPjun08P4500mDRAFT_c1024695	LPjun08P4500mDRAFT_10246953	F003122	EGRKSPKFLVWFIPFVLILVSSTYLTYTSILGYPKVEKPKEGLYLKHYIDEPNWIYLWVVYKEKIPISYQLVYSRETHKALEGVKEKVEGEGKFMVLREEISEGAGTEDGAENHEGGITIGGDISFYEWDYKTDSQQKNPEESE*
LPjun08P4500mDRAFT_c1025102	LPjun08P4500mDRAFT_10251023	F065937	MFKKLLVATAAMALSATTFAGISLSGLYEGTLDSHGTYTQDIHTTMKGTAGASSVTVVLDKDFSVDDMWVESTAGAFTLKIGDSSGDDPDSTTIGVTTTFGAYTVGLS
LPjun08P4500mDRAFT_c1025288	LPjun08P4500mDRAFT_10252881	F067095	TYYTLIGRVLVFWGDIFCKYSLDLETNGWMKSSLLLWSIGVWFYEASNKYAWIHIIGRDTPTKKYNG*
LPjun08P4500mDRAFT_c1025557	LPjun08P4500mDRAFT_10255572	F101354	VGFFVCGMMGRFEFIMKLILFFFVISSVFSQEIDPQAIDTEKLRIALVNASRNSQRVIVEDFTGTL*
LPjun08P4500mDRAFT_c1025663	LPjun08P4500mDRAFT_10256632	F094003	MNYKGETMNKIYTGAGVVSISVVISVLVYIIINGV*
LPjun08P4500mDRAFT_c1027076	LPjun08P4500mDRAFT_10270761	F004643	LARYYCKDFWEEEGWVSCFECDIIFYDLEKLYEHQLIHLREEVK*
LPjun08P4500mDRAFT_c1027353	LPjun08P4500mDRAFT_10273533	F036742	MPLWSSSLAQDSMEYEFDVTPGVGALEFTIHDNILLNGTDGAPATNAGFRLLLEEQIEKRPTWLNKDEQANCFANNEGWWLRHTKNSAGTQYWDECLVALGGLTGTSATTGLGVAQITHVSFEGVTSGSANDSPAYSVSSSGTLATAYVQ
LPjun08P4500mDRAFT_c1029277	LPjun08P4500mDRAFT_10292771	F002874	SSNIDLSLNRSLGELESSYWEFLEATEGEDSSEWSKSVQEDLSALEGYLMKMDLL*
LPjun08P4500mDRAFT_c1029515	LPjun08P4500mDRAFT_10295151	F092360	GDREADTRFGAFCDGAANAYVFEGNWAGTWVTNTALSHSDIQGDTSETKASQPFRVNGFAMDPLGWATKNNKDATNTWIWSPSHHPDRLEDTSENKKDPYPNITSGAADSNYLKASASMDDEDYFQTQADNSYWANNYPLDTA*
LPjun08P4500mDRAFT_c1030028	LPjun08P4500mDRAFT_10300282	F020712	MKKLMMILVILLATTINCWAGNSVYIWQVNQDSDGSIYIKQDGTGNMVGLSTSYPFLINGDNLTLIIKQIGNSNVAKDSNHRSFKGSNMTFDYVATGDSNVLRLDLDDVGQDGHYYDIDITGSLNI
LPjun08P4500mDRAFT_c1030195	LPjun08P4500mDRAFT_10301951	F092216	MTQPYNRFDLEEEIMNIWQTEDDLDAVVHRMVENPDPIPNKEIANLLIAVSKLHDLRCQKLFDVFEKMVIDKCFVCKGTSLDYRGVPLEDEDAMQGNF
LPjun08P4500mDRAFT_c1031529	LPjun08P4500mDRAFT_10315291	F097522	HQLIKKNNMKRLTKNDSSKRLAALVYDKALRKQIEERVKSKYIKRIEYLVGANNELMKELEQYERVSMSEKI*
LPjun08P4500mDRAFT_c1031529	LPjun08P4500mDRAFT_10315292	F059074	MEIDLSLNRSLEELVSSYFEAYEAGMGCDSFLSVNTNATAADVSCYYALEDYLSGMGAL*
LPjun08P4500mDRAFT_c1031614	LPjun08P4500mDRAFT_10316142	F026589	MSISKDELLKRKEEIVTEYNNLVTEIEKGESQVKTLRNNLSALAGALQQTDLFIKQIEDDGDA
LPjun08P4500mDRAFT_c1032413	LPjun08P4500mDRAFT_10324131	F007946	RDIMSTRTLIDNIKTGDAQKSNNTFNSIMQDKILSALNNHKQEVASKMYGATNDAPAVEEPAVETPEGEVATDADV*
LPjun08P4500mDRAFT_c1032544	LPjun08P4500mDRAFT_10325443	F011704	MNIDDFQELIDLTDHLAMSNEYLIRKFTEGGNYLIIXTFGDFLILERDEVDAVFSTIWNDLYGPISEEIPHILN*
LPjun08P4500mDRAFT_c1032698	LPjun08P4500mDRAFT_10326982	F082825	GCYGHWVKGPGHHRGTRTLLKDAHLPYYQCVDENNKGNNLKERRYL*
LPjun08P4500mDRAFT_c1033275	LPjun08P4500mDRAFT_10332752	F064789	DIPIDPLTSQILVKYIEGLSSSEKNRTIQQIQRTERAFMKVLGKAHENI*
LPjun08P4500mDRAFT_c1033326	LPjun08P4500mDRAFT_10333262	F054935	MKRRTFIKYTSLISSAVFLPLAQLFGAKPKPKKSLTTFISDLPLQGSPFRXNCDSLDXYNDISFETMIDDIVHYRTPAKLRDKLILGIKTKDD*
LPjun08P4500mDRAFT_c1034290	LPjun08P4500mDRAFT_10342902	F070936	KEKWNEKVSLKGLDQFRAMYKTWLKSGVDPRFIKAMEKLYDDMVIGGMYSSRSAEDAGILKIDGKTKYKNANW*
LPjun08P4500mDRAFT_c1035585	LPjun08P4500mDRAFT_10355852	F067826	AEVDTSVSGYSIINRYNDSHRAYLKIDTDNEADIQILQDTEAQHFDIGXSSSQENITIIQTD*
LPjun08P4500mDRAFT_c1035685	LPjun08P4500mDRAFT_10356853	F092225	LNACGMTAPAFLATSTGAYSEYKVMSIIKTGTDFTLSLAKLPTTNDMVLSRITGYECKVSRALKQGIEYICRDVTIHPPENGKVNIDNKKEK*
LPjun08P4500mDRAFT_c1036832	LPjun08P4500mDRAFT_10368321	F005336	MESGIQGGGGLVVELDANIIMSGKGDLMSMPDKTGRRWVELYNIDPKENMHVELEKMLIDLAIKHDPKNKEYLETVPEIGIGVWYKLQTDFKDDGKKISLIIADYIDGVNAILKKHKKDIQGVVHGYYVRRGAVAVKHPSGRMVGGDSAIKEWNVYDEQVVDKIKIIKVHTFNTKTRETDWIAKSVIPRLGKIPHTHWVGGATELSTY
LPjun08P4500mDRAFT_c1037419	LPjun08P4500mDRAFT_10374192	F031254	NAATSIAVDSVLPDDKPAIGDIEAGNEEQLRAYMFQNLTQTVLYAVIGFLIFTNVVGPWAAQRRAKRKAEQVAEDQRRKDKYDAMKAELTARRNKE*
LPjun08P4500mDRAFT_c1038285	LPjun08P4500mDRAFT_10382851	F001625	MALTISTSDWTDANVRKTLSWQAALTSKLRVYAIKVTFGASDNYATGGVSADLKVSRIKTLVAVXPTYXNXLREVVYDKANQKIKLFDVGGSATTPFTETPNTSSACNSKIFEFLVIGY*
LPjun08P4500mDRAFT_c1039403	LPjun08P4500mDRAFT_10394031	F087318	LFPHITSKTFINKDVFTLLMGISVHVYETVDEYVLRNKHNISDKLEVNEAALSLLDIWITPDDKLMVVCNCENFFDRPDVSRSISCFQKNNIHKYLKGDEKLVKYDDVEFDPKTENIQFFKKRLRKAPIFFRVGRFWGNKPRKTMKIDWSKKFFNIKLNRIEFILFDPKAKPQPKPKVRSRNDMGYPKNRG*
LPjun08P4500mDRAFT_c1040699	LPjun08P4500mDRAFT_10406991	F034336	MKINVKVLSAFLLIVNLYAVENPEDVKPTIQNGKGLFVLLDDTSWISQIVAEAYILGTIDGIITRKRPLRALCGNKVDKALLTIPMGVEIERILSIVHQFLKDNPENLYKPSIALIRQSLLRAFDQYDIAGY*
LPjun08P4500mDRAFT_c1041384	LPjun08P4500mDRAFT_10413842	F017718	MTTQNYDSALDLVNERLKQIDKIKEKFSGFPEVQEKLQGAKXALVESEEEIMTYYDLTSIEKYKKT*
LPjun08P4500mDRAFT_c1041652	LPjun08P4500mDRAFT_10416523	F016411	SYLTREYTEGGIMKIKSEEHDDYPDSLVLACRAVTSGNQWHVLDVGKELQKALFG*
LPjun08P4500mDRAFT_c1042133	LPjun08P4500mDRAFT_10421331	F003285	MPDQESFLQLKSEIQTLKIKDEYRSKELDALMSKLDDTSSKLNTLSDNISRLLAGQETHKTNDNEVRDELKILHTRIGDLHDKCSEMIDKTETRVSSDISLLYKKVDSLEK
LPjun08P4500mDRAFT_c1044376	LPjun08P4500mDRAFT_10443761	F010197	NLFLLPNTTHELKAFTIKHDLAQPMKKNLSRQDRIFFF*
LPjun08P4500mDRAFT_c1044696	LPjun08P4500mDRAFT_10446961	F017906	EGGEKGQFDIFRNGELFLSKEDMGRFPTKEDVDAMIKELEPFSE*
LPjun08P4500mDRAFT_c1044957	LPjun08P4500mDRAFT_10449571	F096068	MALLKDVVDFCKIELNIPKDILVSVEIEDISEDNVKGWTTDSAEDDEYDIEI
LPjun08P4500mDRAFT_c1045961	LPjun08P4500mDRAFT_10459613	F005103	IFINKKEMPYSHQNMARAINSFLPYLTNDDLTELGQDILDLMNHREKKEAISRLEVKQHSWPYPDTINRNEI*
LPjun08P4500mDRAFT_c1047992	LPjun08P4500mDRAFT_10479922	F064788	MTYTEKQLKFLSAAIVKYGEGAVLAKKTITEIAEENGLKFPFWMTDARRMGAFTKVSKDTYRLPALNGGEGATVADVVPAPVVQPDRPVTPASVETKKVESTL
LPjun08P4500mDRAFT_c1048433	LPjun08P4500mDRAFT_10484331	F011520	ILLIIVKKLNVVVDLNKFINHTSLKIASIVHFITLNEKN*
LPjun08P4500mDRAFT_c1049664	LPjun08P4500mDRAFT_10496642	F008625	MEVAGNRLVWRHIQQENQRMILDPLGYDPIIDIDEMHQRNRRKTDDPYIRATSKNADYKRWKDNPAERR*
LPjun08P4500mDRAFT_c1049933	LPjun08P4500mDRAFT_10499331	F099541	MNHITSRNIDKKVQLKKLKEKLHVAGHDRSNKKVNMVKALKNLMKRE
LPjun08P4500mDRAFT_c1050118	LPjun08P4500mDRAFT_10501182	F007774	MSKEDKLTPEQEKELIMLSAEIEAEAIKMRMDYEEHPSEESGSVVYVNEQSTLLEDEDTKLGDKALVSSSQILAKELKKQKKKGDK*
LPjun08P4500mDRAFT_c1050871	LPjun08P4500mDRAFT_10508712	F008084	IMNAIVQKIGRWHSKVFGYVSAKAKTSKWWAIALTLLVLYEIVEHVVYPILVPYLAYMHWFK*
LPjun08P4500mDRAFT_c1051339	LPjun08P4500mDRAFT_10513391	F018452	YKTSTRSETEAQLVQNIKASFKFYQTNLRTGKVHEIDWHHVQMSNKEDYLGFIQGVGYEGDREADTRFGAFCDGAANAYVFEGNWAGTWVTNTALSHSDIQGDTSETKASQPFRVNGFAMDPLGWATKNNKDATNTWIWSPSHHPDRLEDTSENKKDPYPNITSGAAD
LPjun08P4500mDRAFT_c1051798	LPjun08P4500mDRAFT_10517981	F016996	EVHWSNKHEPPAPKGMHKLRSGRDIPSTPKVDKIHNKVAAMTDRNDHFGATIQLAKECGDKDLVQIYNALELMHKKYGVVGNKSIELRQIFSPVLNNQLDRKFGKYANVLRDAL*
LPjun08P4500mDRAFT_c1051803	LPjun08P4500mDRAFT_10518031	F032311	AKFPVNATDDIXMRMXPNKPAFKFPSPNSDMMIHVFLRPMEGKKGMMAFNYQLEDK*
LPjun08P4500mDRAFT_c1051940	LPjun08P4500mDRAFT_10519401	F025858	KEFTSEVDCWNYYDTGAGESKMLNSYGTQVLDHQGNKPDKDYMKKHRPPHRVYPTRMYKNFGGPMMWLTCDIKQ*
LPjun08P4500mDRAFT_c1052388	LPjun08P4500mDRAFT_10523882	F033080	MEDKRWISRLGTVTYMLGETVIDNIARKVAEEPMEDELENWIVGETEDGHMPLVRKPQHVIDEERADEIRQLRKEQAQMEMFDDPYLNWSGHR*
LPjun08P4500mDRAFT_c1052446	LPjun08P4500mDRAFT_10524462	F080484	YFNFFGVPNHRTGLSMFGYSITKRTKKNNEYYMGIGTIIINLSITAGWKYYFKKSNADDYYLAMSLVGSTLEIDDRYDETKKVSKDFIAGNFSAGYEKRLSKNMYLNMEIFTLTGIMPNSEGITDGIRLLVAPSFHFNYRI*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300000181: Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P4 500m

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences