Metagenome Family F097993

Basic Information
Family ID	F097993
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	38 residues
Representative Sequence	MTETPHKTGPAWAEFSDDVRESVEIVRTAAIEAPCRAA
Number of Associated Samples	83
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.58 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	65.38 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Most Common Taxonomy
Group	Bacteria (92.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.846 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.88% β-sheet: 0.00% Coil/Unstructured: 62.12%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01590	GAF	29.81
PF00990	GGDEF	6.73
PF04909	Amidohydro_2	3.85
PF00120	Gln-synt_C	2.88
PF04075	F420H2_quin_red	2.88
PF00563	EAL	2.88
PF00535	Glycos_transf_2	1.92
PF00296	Bac_luciferase	1.92
PF13426	PAS_9	0.96
PF12680	SnoaL_2	0.96
PF00440	TetR_N	0.96
PF01738	DLH	0.96
PF00378	ECH_1	0.96
PF02780	Transketolase_C	0.96
PF01565	FAD_binding_4	0.96
PF16751	RsdA_SigD_bd	0.96
PF01965	DJ-1_PfpI	0.96
PF08241	Methyltransf_11	0.96
PF00881	Nitroreductase	0.96
PF08240	ADH_N	0.96
PF00931	NB-ARC	0.96
PF02702	KdpD	0.96
PF13185	GAF_2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	2.88
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	2.88
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	2.88
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	2.88
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.92
COG2205	K+-sensing histidine kinase KdpD	Signal transduction mechanisms [T]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.42 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	89.42 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	86.54 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	83.65 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	79.81 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	75.96 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Mycobacterium simiae complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex	2.88 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	2.88 %
Mycobacterium kansasii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	0.96 %
Mycobacterium innocens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium innocens	0.96 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Mycobacterium interjectum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium interjectum	1.92 %
Mycobacterium sp. UM_CSW	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	1.92 %
Mycobacterium genavense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium genavense	0.96 %
Mycobacterium sp. JS623	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	0.96 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.96 %
Mycobacterium kansasii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	0.96 %
Mycobacterium innocens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium innocens	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001131\|JGI12631J13338_1001233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	6676	Open in IMG/M
3300001867\|JGI12627J18819_10144911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	969	Open in IMG/M
3300002245\|JGIcombinedJ26739_100006541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. JS623	9090	Open in IMG/M
3300004152\|Ga0062386_101031931	Not Available	682	Open in IMG/M
3300005610\|Ga0070763_10004222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5441	Open in IMG/M
3300005764\|Ga0066903_100697540	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300005764\|Ga0066903_103218622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	883	Open in IMG/M
3300005764\|Ga0066903_105444031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	672	Open in IMG/M
3300006052\|Ga0075029_100392977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	900	Open in IMG/M
3300006102\|Ga0075015_100097896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1469	Open in IMG/M
3300006102\|Ga0075015_100369145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	804	Open in IMG/M
3300006172\|Ga0075018_10018672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2661	Open in IMG/M
3300009633\|Ga0116129_1004391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	6493	Open in IMG/M
3300009784\|Ga0123357_10471594	Not Available	1069	Open in IMG/M
3300009826\|Ga0123355_11172179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	788	Open in IMG/M
3300009826\|Ga0123355_11778242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	583	Open in IMG/M
3300010048\|Ga0126373_10442394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1333	Open in IMG/M
3300010049\|Ga0123356_11049460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	984	Open in IMG/M
3300010049\|Ga0123356_11070382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	975	Open in IMG/M
3300010339\|Ga0074046_10323365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	944	Open in IMG/M
3300010341\|Ga0074045_10162169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1513	Open in IMG/M
3300010376\|Ga0126381_103049337	Not Available	664	Open in IMG/M
3300016319\|Ga0182033_11930994	Not Available	537	Open in IMG/M
3300016341\|Ga0182035_11697107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium genavense	571	Open in IMG/M
3300016357\|Ga0182032_10011202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	4853	Open in IMG/M
3300016357\|Ga0182032_10040336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2947	Open in IMG/M
3300016357\|Ga0182032_11664332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	556	Open in IMG/M
3300016371\|Ga0182034_10002685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	9124	Open in IMG/M
3300016371\|Ga0182034_10114528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1962	Open in IMG/M
3300017822\|Ga0187802_10046403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	1580	Open in IMG/M
3300017942\|Ga0187808_10018190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2819	Open in IMG/M
3300017946\|Ga0187879_10060388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2215	Open in IMG/M
3300017959\|Ga0187779_11172872	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300017961\|Ga0187778_10141355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1514	Open in IMG/M
3300017972\|Ga0187781_10093458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2083	Open in IMG/M
3300017972\|Ga0187781_10147047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1653	Open in IMG/M
3300017973\|Ga0187780_10423273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	946	Open in IMG/M
3300018009\|Ga0187884_10256951	Not Available	711	Open in IMG/M
3300018058\|Ga0187766_10036324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2871	Open in IMG/M
3300018086\|Ga0187769_10018376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	4601	Open in IMG/M
3300018086\|Ga0187769_10819891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	703	Open in IMG/M
3300018088\|Ga0187771_10317629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1306	Open in IMG/M
3300018090\|Ga0187770_11250634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	601	Open in IMG/M
3300020582\|Ga0210395_10008702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	7625	Open in IMG/M
3300020582\|Ga0210395_10050765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3038	Open in IMG/M
3300020582\|Ga0210395_10560935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	858	Open in IMG/M
3300020582\|Ga0210395_10819397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	694	Open in IMG/M
3300021170\|Ga0210400_10576146	Not Available	928	Open in IMG/M
3300021401\|Ga0210393_10647424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	862	Open in IMG/M
3300021405\|Ga0210387_10725033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	881	Open in IMG/M
3300021478\|Ga0210402_10305997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1472	Open in IMG/M
3300021560\|Ga0126371_12082481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	683	Open in IMG/M
3300024288\|Ga0179589_10178172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	920	Open in IMG/M
3300025463\|Ga0208193_1015028	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300027093\|Ga0208093_102936	Not Available	789	Open in IMG/M
3300027376\|Ga0209004_1012885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1264	Open in IMG/M
3300027439\|Ga0209332_1085029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	571	Open in IMG/M
3300027502\|Ga0209622_1090973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	559	Open in IMG/M
3300027537\|Ga0209419_1100860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	575	Open in IMG/M
3300027583\|Ga0209527_1001524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4708	Open in IMG/M
3300027609\|Ga0209221_1102422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	736	Open in IMG/M
3300027701\|Ga0209447_10016379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2099	Open in IMG/M
3300027783\|Ga0209448_10016732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2392	Open in IMG/M
3300027824\|Ga0209040_10009780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6752	Open in IMG/M
3300027824\|Ga0209040_10061705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2222	Open in IMG/M
3300027895\|Ga0209624_10027999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3581	Open in IMG/M
3300027911\|Ga0209698_10107191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2332	Open in IMG/M
3300031543\|Ga0318516_10000808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	10784	Open in IMG/M
3300031543\|Ga0318516_10001572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	8905	Open in IMG/M
3300031544\|Ga0318534_10106951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1603	Open in IMG/M
3300031544\|Ga0318534_10320408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	893	Open in IMG/M
3300031546\|Ga0318538_10443767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	703	Open in IMG/M
3300031573\|Ga0310915_10012120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. UM_CSW	5036	Open in IMG/M
3300031682\|Ga0318560_10009723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	4094	Open in IMG/M
3300031715\|Ga0307476_10323680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1133	Open in IMG/M
3300031718\|Ga0307474_10162474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1689	Open in IMG/M
3300031718\|Ga0307474_10532272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	923	Open in IMG/M
3300031751\|Ga0318494_10901003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	519	Open in IMG/M
3300031754\|Ga0307475_10142785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1897	Open in IMG/M
3300031754\|Ga0307475_10484455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	993	Open in IMG/M
3300031763\|Ga0318537_10003632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	4957	Open in IMG/M
3300031765\|Ga0318554_10039935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium interjectum	2546	Open in IMG/M
3300031768\|Ga0318509_10523262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	662	Open in IMG/M
3300031778\|Ga0318498_10022745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	2672	Open in IMG/M
3300031793\|Ga0318548_10000640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	9827	Open in IMG/M
3300031793\|Ga0318548_10370724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	702	Open in IMG/M
3300031890\|Ga0306925_10442911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1389	Open in IMG/M
3300031894\|Ga0318522_10290272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	620	Open in IMG/M
3300031896\|Ga0318551_10756052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	564	Open in IMG/M
3300031912\|Ga0306921_12003567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	616	Open in IMG/M
3300031954\|Ga0306926_10115944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3297	Open in IMG/M
3300031962\|Ga0307479_10682341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1007	Open in IMG/M
3300032010\|Ga0318569_10266848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	796	Open in IMG/M
3300032068\|Ga0318553_10021873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium interjectum	2986	Open in IMG/M
3300032076\|Ga0306924_10981990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	928	Open in IMG/M
3300032261\|Ga0306920_101385462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1008	Open in IMG/M
3300032261\|Ga0306920_104148949	Not Available	523	Open in IMG/M
3300032783\|Ga0335079_10776836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	994	Open in IMG/M
3300032805\|Ga0335078_12607294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	518	Open in IMG/M
3300032829\|Ga0335070_10025635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	6767	Open in IMG/M
3300032893\|Ga0335069_10282322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium innocens	1983	Open in IMG/M
3300032895\|Ga0335074_10824226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	860	Open in IMG/M
3300032896\|Ga0335075_10002512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	29435	Open in IMG/M
3300032896\|Ga0335075_10071650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.19%
Host-Associated	Host-Associated	4.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.81%
Aquatic	Environmental → Aquatic	15.38%
Arthropoda	Host-Associated → Arthropoda	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.81%
Freshwater	Environmental → Aquatic → Freshwater	10.58%
Sediment	Environmental → Aquatic → Sediment	4.81%
Digestive System	Host-Associated → Arthropoda → Digestive System	4.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.27%
Loam	Environmental → Terrestrial → Soil → Loam	14.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.81%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	4.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	43.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.81%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	4.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.58%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.62%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.81%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300027093	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF021 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097993

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12631J13338_10012336	3300001131	Forest Soil	MTETPHKTGPASAEFCDDVLESVEIVCTAAIEAPCRAA*
JGI12627J18819_101449112	3300001867	Forest Soil	MTETPHKAGPALGEFSDDGLESVETVRTAAMGAPCRAA*
JGIcombinedJ26739_1000065417	3300002245	Forest Soil	MFEEPTMTETPHQNGPAWVEFSDEVLASIEAVRTAAIEAPCRAA*
Ga0062386_1010319312	3300004152	Bog Forest Soil	LRSPTMAVPHKTGLAWAEFSDDVLEAVEIVPTGAIGEPCRPT*
Ga0070763_100042222	3300005610	Soil	MTETPHKTGPAWAEFCDDVRESAEIICTAAIEAPCRAA*
Ga0066903_1006975403	3300005764	Tropical Forest Soil	MMPGTETRQKTWPTWAEFADEMPESVATVRTAAIEAPCRAA*
Ga0066903_1032186222	3300005764	Tropical Forest Soil	MTETPRKTGQAWAEFSDDVLESVEAVRTAAIEAPCRAA*
Ga0066903_1054440311	3300005764	Tropical Forest Soil	MTEALHKTEPAPIEFSDDLLESVETVSTAAIEAPCRAA*
Ga0075029_1003929772	3300006052	Watersheds	MAVPHKTGLAWAEFSDDVLSDDLLEAVEIVPTGAIEEPCRPT*
Ga0075015_1000978962	3300006102	Watersheds	MAVPHKTGLAWAEFSDDVLEAVEIVRTAAIEETCRPI*
Ga0075015_1003691451	3300006102	Watersheds	YLRSPTMAVPHKTGLAWAEFSDDVLSDDLLEAVEIVPTGAIEEPCRPT*
Ga0075018_100186722	3300006172	Watersheds	MTEAPDKPAWVEFCADVLESLESVESVHTAAIEAPCCAA*
Ga0116129_10043912	3300009633	Peatland	MTETPHKTGPAWAELCDDVLESVEIVCTAAIEAPCRAA*
Ga0123357_104715943	3300009784	Termite Gut	MAETPQNTGSPQADSSDDLLESVEIVRTAAIETPWRAA*
Ga0123355_111721792	3300009826	Termite Gut	MTETPRKTGSPQAGFSDGVLASVEIVRTAAIEAPWRAG*
Ga0123355_117782421	3300009826	Termite Gut	SPGCLRSPTMAETPQNTGSPQADSSDDLLESVEIVRTAAIETPWRAA*
Ga0126373_104423942	3300010048	Tropical Forest Soil	MMPGTETRQKTWPTWAEFSDEVPESGATVRTAAIEAPCRAA*
Ga0123356_110494602	3300010049	Termite Gut	MTETPQKTGSSQAEFSDGVLASVEIVRTAAIEAPWRVA*
Ga0123356_110703822	3300010049	Termite Gut	MAETPQKAGSPQADSSDDVLESVEIVRTVAIEAPWRAA*
Ga0074046_103233652	3300010339	Bog Forest Soil	MAVPHKTGLAWAEFSDDVLEAVEIVPTGAIGEPCRPT*
Ga0074045_101621693	3300010341	Bog Forest Soil	MTETPHKTGSARAEFSDGVRESVETVREAVIEVPWRAA*
Ga0126381_1030493371	3300010376	Tropical Forest Soil	MMPGTETRQKTWPTWAEFADEMPESVATVRTAAIEAPCRA
Ga0182033_119309941	3300016319	Soil	MTETPHKTGPVSAEFSADVLESVEIVRAAPIEEPC
Ga0182035_116971072	3300016341	Soil	MTETPHKTGPTSAEFSDAVRESVEIVRTAPIEEPWRAA
Ga0182032_100112026	3300016357	Soil	MTQTPHKTGSVWAEFSGDLPESVEIVRTAAIEAPCR
Ga0182032_100403363	3300016357	Soil	MAQTPHKTGSVWAEFSGDLPESVEIVRTLAIEAPCSVA
Ga0182032_116643321	3300016357	Soil	MTQTPHKTGSAWAEFSGDVTESVEIVRTLAIEAPCRVA
Ga0182034_100026854	3300016371	Soil	MTETPHKTGPTSAEFSAAVRESVEIVRTAPIEEPWRAA
Ga0182034_101145282	3300016371	Soil	CWRSPQMAQTPHKTGSVWAEFSGDLPESVEIVRTLAIEAPCRVA
Ga0187802_100464032	3300017822	Freshwater Sediment	MTETPHKTGLAWAEFPDDVLEAVEIVRTAAIEVPCRA
Ga0187808_100181903	3300017942	Freshwater Sediment	MTETPHKTGLAWAEFPDDVLEAVEIVRTAAIEVPCRAA
Ga0187879_100603882	3300017946	Peatland	MTETPHKTGLAWVEFSDDVLESVETVLTAAIEGPCRAA
Ga0187779_111728721	3300017959	Tropical Peatland	MTKTRHKTGPAWAECFDGVLESVETVRTAAIEAPCRAA
Ga0187778_101413551	3300017961	Tropical Peatland	MTETRPKTGPAWVEFSIDVLESVETVRTTAIEAPCRAG
Ga0187781_100934582	3300017972	Tropical Peatland	MPETRDKTGPAWAESSDDVRERVEAARKAAIEAPCSTS
Ga0187781_101470472	3300017972	Tropical Peatland	MTETPHKTGLACAEFADDVLEAVDIVRTAAIEEPCRAA
Ga0187780_104232732	3300017973	Tropical Peatland	MTETPHKTGLAWAEFADDVLEAVEIVRTAAIEEPCRAA
Ga0187884_102569512	3300018009	Peatland	MTETPHKTGPAWAEFCDDVRESAEIICTAAIEAPCRAA
Ga0187766_100363242	3300018058	Tropical Peatland	MTKTRHKTGPAWAEFSDDVLESVQTVRTAAIEAPCRAA
Ga0187769_100183762	3300018086	Tropical Peatland	MTETPHKTGLAWAEFADDVLESVEIVCTAAIEAPCRAA
Ga0187769_108198911	3300018086	Tropical Peatland	TLHKTGPARAEFSDDVREPVEAARKAAIEVPWRAA
Ga0187771_103176292	3300018088	Tropical Peatland	MTETPHKTRPAWAGFCDDVRESVEIVRTAAIEAPCGAA
Ga0187770_112506341	3300018090	Tropical Peatland	TETPHKTGLAWAKFADDVLEAVEIVRTAAIEEPCRAA
Ga0210395_100087021	3300020582	Soil	MTETPHKTGPVWAELPDDVLESVEIVRIAAIGEPCRAA
Ga0210395_100507654	3300020582	Soil	MTETQRKTEPAWAEFCDDALESVAIVRTAAIESPCRAT
Ga0210395_105609352	3300020582	Soil	MTETAHQTGPAWAEFSDDVIESVEIVRIAAIEAPWRGA
Ga0210395_108193972	3300020582	Soil	MAVPHKTGLAWAEFSDDVLEAVEIVPTGAIGGPCRPT
Ga0210400_105761461	3300021170	Soil	MMPGMATPHKTEPAWAELPDDVPESVATVRTATIEAACRAG
Ga0210393_106474242	3300021401	Soil	MTETPHKTGPVWAEFPDDVLESVEIVRIAAIGEPCRAA
Ga0210387_107250332	3300021405	Soil	MALPHKTGLAWAEFSDDVLEAVEIVPTGAIGEPWRPT
Ga0210402_103059972	3300021478	Soil	MAVPHKTGLAWAEFSDDVLEAVEIVPTGAIGEPCRPT
Ga0126371_120824811	3300021560	Tropical Forest Soil	MTAIPHKTGPAGAEFSDDVLETVETVRTTAIEAPCRAA
Ga0179589_101781721	3300024288	Vadose Zone Soil	SPTMTETPHKTRLAWAEFSDDVLESGETVRTAVIEAPCRAA
Ga0208193_10150282	3300025463	Peatland	MTETPHKTGPAWAELCDDVLESVEIVCTAAIEAPCRAA
Ga0208093_1029362	3300027093	Forest Soil	MTETPHKTGPVWAELPDDVLESVEIVRIAAIGEPC
Ga0209004_10128853	3300027376	Forest Soil	MTETPHKTGPEWAEFSDDVIESVEIVRIAAIEAPCGAA
Ga0209332_10850291	3300027439	Forest Soil	MTETPHKTGLTWVEFSDDVLESVETVLTAAIEGPCRAA
Ga0209622_10909732	3300027502	Forest Soil	MTETPHKAGPALGEFSDDGLESVETVRTAAMGAPCRAA
Ga0209419_11008601	3300027537	Forest Soil	WMFEEPTMTETPHQNGPAWVEFSDEVLASIEAVRTAAIEAPCRAA
Ga0209527_10015242	3300027583	Forest Soil	MTETPHQNGPAWVEFSDEVLASIEAVRTAAIEAPCRAA
Ga0209221_11024222	3300027609	Forest Soil	MTETPHKTGPASAEFCDDVLESVEIVCTAAIEAPCRAA
Ga0209447_100163792	3300027701	Bog Forest Soil	MTEPPHKTGPAWAEFSDDVLESVEIVCTAAIEAPCRAA
Ga0209448_100167322	3300027783	Bog Forest Soil	MTETPHKTGPARAEFSDDVRESVEIVCTAAIEAPCRAA
Ga0209040_100097804	3300027824	Bog Forest Soil	MTETAHKTGPVWAELPDDVLESVEIVRIAAIGEPCRAA
Ga0209040_100617052	3300027824	Bog Forest Soil	MTETPHKTRLAWAEFSDDVLESVETVRTAAIEAPCRAA
Ga0209624_100279995	3300027895	Forest Soil	MTETPHKTGPAWAEFCDDVLESVEIVCTAAIEAPCRAA
Ga0209698_101071911	3300027911	Watersheds	MAVPHKTGLAWAEFSDDVLSDDLLEAVEIVPTGAIEEPCRPT
Ga0318516_100008082	3300031543	Soil	MAQTPHKTGSVWAEFCGDVPESVEIVRTAAIEAPCRAA
Ga0318516_100015726	3300031543	Soil	MTETPHKTGPTSAEFSDAVRESVEIVRIAPIEEPWRAA
Ga0318534_101069512	3300031544	Soil	MAQTPHKTGSVWAEFSGDLPESVEIVRTLAIEAPCRVA
Ga0318534_103204081	3300031544	Soil	GCWRSPQMAQTPHKTGSVWAEFCGDVPESVEIVRTAAIEAPCRAA
Ga0318538_104437671	3300031546	Soil	MTETAHKTGPACAEFSDDVIESVEIVRIAAIEAPCGAA
Ga0310915_100121205	3300031573	Soil	MTQTPHKTGSVWAEFSGDLPESVEIVRTLAIEAPCRVA
Ga0318560_100097231	3300031682	Soil	TQTPHKTGSAWAEFSGDLPESVEIVRTLAIEAPCRVA
Ga0307476_103236802	3300031715	Hardwood Forest Soil	MTETPHRTGPPWAEFSADVLESVEIVRTAAIESLCSAT
Ga0307474_101624742	3300031718	Hardwood Forest Soil	MTETPHKTGSAWAEFSDDVLESVEIVRSAAIEEPCRAA
Ga0307474_105322721	3300031718	Hardwood Forest Soil	MTETPHRTGPAWAEFSADVLESVEIVRTAAIESLCSAT
Ga0318494_109010032	3300031751	Soil	MTQTPHKTGSVWAEFCGDVPESVEIVRTAAIEAPCRVA
Ga0307475_101427853	3300031754	Hardwood Forest Soil	MTGTPHKTGSAWAEFCDGALESVEIVRSAAIEARCRAA
Ga0307475_104844552	3300031754	Hardwood Forest Soil	MTETPHKTGPAWAKFSDDVLESVEIVRSAAIEEPCRAA
Ga0318537_100036322	3300031763	Soil	MAQTPHKTGSVWAEFSGDLPESVEIVRTSAIEAPCRVA
Ga0318554_100399351	3300031765	Soil	MAQTPHKTGSVWAEFSGDLPESVEIVRTAAIEAPCR
Ga0318509_105232622	3300031768	Soil	ETPHKTGPTSAEFSAAVRESVEIVRTAPIEEPWRAA
Ga0318498_100227453	3300031778	Soil	MAQTPHKTGSVWAEFCGDVPESVEIVRTAAIEAPCRVA
Ga0318548_1000064013	3300031793	Soil	MAQTPHKTGSVWAEFSGDLPESVEIVRTAAIEAPCRAA
Ga0318548_103707242	3300031793	Soil	QTPHKTGSVWAEFSGDVPESVEIVRTAAIEAPCRVA
Ga0306925_104429112	3300031890	Soil	MTETPDTTGPAWAELSDDVLDSVEIVPTTAFEAPWRAA
Ga0318522_102902722	3300031894	Soil	MTQTPHKTGSVWAEFSGDVPESVEIVRTAAIEAPCRVA
Ga0318551_107560522	3300031896	Soil	MTQTPHKTGSVWAEFSGDLPESVEIVRTAAIEAPCRAA
Ga0306921_120035671	3300031912	Soil	MTQTPHKTGSVWAEFCGDVPESVEIVRTAAIEAPC
Ga0306926_101159442	3300031954	Soil	MAQTPHKTGSVWAEFSGDLPESVEIVRTAAIEAPCRVA
Ga0307479_106823412	3300031962	Hardwood Forest Soil	MTETPHKTGPAWAEFSDDVRESVEIVRTAAIEAPCRAA
Ga0318569_102668481	3300032010	Soil	MTQTPHKTGSVWAEFCGDVPESVEIVRTAAIEAPCRV
Ga0318553_100218733	3300032068	Soil	MAQTPHKTGSVWAEFCGDVPESVEIVRTAAIEAPCR
Ga0306924_109819901	3300032076	Soil	KRHEARPACAEFSDDVFEAVETVCTAAIEAPCREG
Ga0306920_1013854621	3300032261	Soil	CLRSPTMTETAHKTGPACAEFSDDVIESVEIVRIAAIEAPCGAA
Ga0306920_1041489491	3300032261	Soil	MTETAHKTGPACAEFSDDVIESVEIVRIAAIEAPCG
Ga0335079_107768362	3300032783	Soil	TETPHKSGLAWAELTDDALEAVEIIRTAAIEDPCRAT
Ga0335078_126072942	3300032805	Soil	MTETPHKSGLAWAELTDDALEAVEIIRTAAIEDPCRAT
Ga0335070_100256356	3300032829	Soil	MTETPHKTGPAWTEFAGDVLESVKVACAAAIEAPCRAA
Ga0335069_102823223	3300032893	Soil	MTEALHKTGPAWAKFSDDVLESVETVRTAAIEAPCRAA
Ga0335074_108242262	3300032895	Soil	MTETPRKTGQAWAEFSDDVLESVEALRTATIEALCRAV
Ga0335075_1000251225	3300032896	Soil	MTETPHKTGSAWVEFSDDVLESVEMLCTAAIEAPCCAG
Ga0335075_100716502	3300032896	Soil	MTATPHKTGPAWVEFSDDVLESVEMLRTAAIESPCCAG

Hidden Markov Model


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