Metagenome / Metatranscriptome Family F099756

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F099756
Family Type	Metagenome / Metatranscriptome
Number of Sequences	103
Average Sequence Length	78 residues
Representative Sequence	VTRERIERFFKNLASALGHCIFEDAEVLGMVIPALVCVGILWLIGVAVYDFILDPHVTTAATLDSLSINPDKWISR
Number of Associated Samples	84
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.71 %
% of genes near scaffold ends (potentially truncated)	23.30 %
% of genes from short scaffolds (< 2000 bps)	76.70 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.398 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.534 % of family members)
Environment Ontology (ENVO)	Unclassified (32.039 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.340 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.38% β-sheet: 0.00% Coil/Unstructured: 34.62%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF03544	TonB_C	2.91
PF02233	PNTB	2.91
PF08238	Sel1	1.94
PF13545	HTH_Crp_2	1.94
PF00144	Beta-lactamase	1.94
PF13751	DDE_Tnp_1_6	1.94
PF05036	SPOR	1.94
PF08241	Methyltransf_11	1.94
PF13442	Cytochrome_CBB3	1.94
PF14514	TetR_C_9	0.97
PF07228	SpoIIE	0.97
PF05362	Lon_C	0.97
PF05598	DUF772	0.97
PF01042	Ribonuc_L-PSP	0.97
PF00440	TetR_N	0.97
PF01243	Putative_PNPOx	0.97
PF11154	DUF2934	0.97
PF06537	DHOR	0.97
PF03992	ABM	0.97
PF14137	DUF4304	0.97
PF03486	HI0933_like	0.97
PF10127	RlaP	0.97
PF12543	DUF3738	0.97
PF00202	Aminotran_3	0.97
PF02861	Clp_N	0.97
PF04116	FA_hydroxylase	0.97
PF02416	TatA_B_E	0.97
PF10502	Peptidase_S26	0.97
PF06262	Zincin_1	0.97
PF03466	LysR_substrate	0.97
PF00717	Peptidase_S24	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.91
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	2.91
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	1.94
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.94
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.94
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.94
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.94
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	0.97
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.97
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	0.97
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.97
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	0.97
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	0.97
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.97
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.97
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.97
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	0.97
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	0.97
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.97
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.97
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.97
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	0.97
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.40 %
Unclassified	root	N/A	46.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.89 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	16.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.74 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.53 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.77 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.53 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.77 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.53 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.94 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.94 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.97 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.53 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.94 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.94 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.97 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.53 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1.94 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.94 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.97 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.97 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101575058	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	3552	Open in IMG/M
3300000567\|JGI12270J11330_10022352	All Organisms → cellular organisms → Bacteria → Acidobacteria	3875	Open in IMG/M
3300000789\|JGI1027J11758_12934715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1503	Open in IMG/M
3300005332\|Ga0066388_100638602	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300005435\|Ga0070714_102228121	Not Available	533	Open in IMG/M
3300005445\|Ga0070708_101529518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	621	Open in IMG/M
3300005468\|Ga0070707_100707345	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300005764\|Ga0066903_102582487	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005764\|Ga0066903_107299693	Not Available	571	Open in IMG/M
3300006028\|Ga0070717_11358535	Not Available	645	Open in IMG/M
3300006052\|Ga0075029_100041695	Not Available	2635	Open in IMG/M
3300006059\|Ga0075017_101453009	Not Available	540	Open in IMG/M
3300006102\|Ga0075015_100023303	All Organisms → cellular organisms → Bacteria	2763	Open in IMG/M
3300006173\|Ga0070716_100326796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300006893\|Ga0073928_10667255	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	728	Open in IMG/M
3300007982\|Ga0102924_1048903	Not Available	2502	Open in IMG/M
3300009089\|Ga0099828_10505684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300009097\|Ga0058709_10612	Not Available	553	Open in IMG/M
3300009826\|Ga0123355_10425046	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300009826\|Ga0123355_11636094	Not Available	618	Open in IMG/M
3300010048\|Ga0126373_10059560	All Organisms → cellular organisms → Bacteria → Acidobacteria	3419	Open in IMG/M
3300010048\|Ga0126373_11761155	Not Available	683	Open in IMG/M
3300010343\|Ga0074044_10029813	All Organisms → cellular organisms → Bacteria	3855	Open in IMG/M
3300010358\|Ga0126370_10442658	All Organisms → cellular organisms → Bacteria → Acidobacteria	1081	Open in IMG/M
3300010360\|Ga0126372_13223375	Not Available	507	Open in IMG/M
3300010361\|Ga0126378_10254159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1852	Open in IMG/M
3300010366\|Ga0126379_12180823	Not Available	655	Open in IMG/M
3300010366\|Ga0126379_13165754	Not Available	551	Open in IMG/M
3300010376\|Ga0126381_100570324	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300010376\|Ga0126381_101415269	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300010376\|Ga0126381_102014665	Not Available	832	Open in IMG/M
3300010376\|Ga0126381_102895382	Not Available	683	Open in IMG/M
3300010376\|Ga0126381_102934444	Not Available	678	Open in IMG/M
3300010376\|Ga0126381_103679731	Not Available	600	Open in IMG/M
3300010398\|Ga0126383_10519704	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300010859\|Ga0126352_1045314	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300011120\|Ga0150983_10194684	All Organisms → cellular organisms → Bacteria → Acidobacteria	1947	Open in IMG/M
3300011120\|Ga0150983_16680266	Not Available	614	Open in IMG/M
3300011269\|Ga0137392_10351711	Not Available	1221	Open in IMG/M
3300011271\|Ga0137393_11243031	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300012206\|Ga0137380_11100484	Not Available	677	Open in IMG/M
3300012211\|Ga0137377_11287677	Not Available	661	Open in IMG/M
3300012212\|Ga0150985_122117982	Not Available	828	Open in IMG/M
3300012354\|Ga0137366_10188620	All Organisms → cellular organisms → Bacteria	1544	Open in IMG/M
3300012360\|Ga0137375_10185801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1986	Open in IMG/M
3300012363\|Ga0137390_11874231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012683\|Ga0137398_10157815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1476	Open in IMG/M
3300012927\|Ga0137416_10285476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300012927\|Ga0137416_11670025	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300012971\|Ga0126369_12527211	Not Available	599	Open in IMG/M
3300014164\|Ga0181532_10026605	All Organisms → cellular organisms → Bacteria → Acidobacteria	4085	Open in IMG/M
3300016341\|Ga0182035_12108805	Not Available	512	Open in IMG/M
3300016404\|Ga0182037_10974594	Not Available	738	Open in IMG/M
3300016750\|Ga0181505_10614310	Not Available	531	Open in IMG/M
3300017975\|Ga0187782_10341868	All Organisms → cellular organisms → Bacteria → Acidobacteria	1132	Open in IMG/M
3300018017\|Ga0187872_10006693	All Organisms → cellular organisms → Bacteria	7870	Open in IMG/M
3300018029\|Ga0187787_10412673	Not Available	535	Open in IMG/M
3300018032\|Ga0187788_10134003	Not Available	922	Open in IMG/M
3300018057\|Ga0187858_10292265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300019888\|Ga0193751_1019833	All Organisms → cellular organisms → Bacteria	3334	Open in IMG/M
3300019888\|Ga0193751_1023800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2973	Open in IMG/M
3300020580\|Ga0210403_10177730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	1744	Open in IMG/M
3300020580\|Ga0210403_11347805	Not Available	543	Open in IMG/M
3300020581\|Ga0210399_10000060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	76093	Open in IMG/M
3300020583\|Ga0210401_10427503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300020583\|Ga0210401_11304888	Not Available	584	Open in IMG/M
3300021046\|Ga0215015_10801968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5441	Open in IMG/M
3300021088\|Ga0210404_10263640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300021168\|Ga0210406_10006337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12281	Open in IMG/M
3300021178\|Ga0210408_10341768	Not Available	1193	Open in IMG/M
3300021180\|Ga0210396_10487452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1079	Open in IMG/M
3300021404\|Ga0210389_10169687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1697	Open in IMG/M
3300021404\|Ga0210389_10696067	Not Available	796	Open in IMG/M
3300021405\|Ga0210387_11223699	Not Available	651	Open in IMG/M
3300021407\|Ga0210383_10497967	Not Available	1052	Open in IMG/M
3300021479\|Ga0210410_11625513	Not Available	540	Open in IMG/M
3300021559\|Ga0210409_10122566	All Organisms → cellular organisms → Bacteria	2389	Open in IMG/M
3300021560\|Ga0126371_10306578	All Organisms → cellular organisms → Bacteria	1716	Open in IMG/M
3300021861\|Ga0213853_11173986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300022533\|Ga0242662_10189246	Not Available	643	Open in IMG/M
3300022557\|Ga0212123_10053954	All Organisms → cellular organisms → Bacteria	3644	Open in IMG/M
3300022557\|Ga0212123_10092399	Not Available	2502	Open in IMG/M
3300022557\|Ga0212123_10585452	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	707	Open in IMG/M
3300025922\|Ga0207646_10414442	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300025929\|Ga0207664_11687168	Not Available	556	Open in IMG/M
3300025939\|Ga0207665_10304794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1191	Open in IMG/M
3300026551\|Ga0209648_10037071	All Organisms → cellular organisms → Bacteria → Acidobacteria	4232	Open in IMG/M
3300027179\|Ga0208955_100455	Not Available	553	Open in IMG/M
3300027854\|Ga0209517_10047493	All Organisms → cellular organisms → Bacteria → Acidobacteria	3288	Open in IMG/M
3300027911\|Ga0209698_10101667	Not Available	2405	Open in IMG/M
3300027911\|Ga0209698_10521618	Not Available	919	Open in IMG/M
3300028047\|Ga0209526_10061988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2633	Open in IMG/M
3300028536\|Ga0137415_10184183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1913	Open in IMG/M
3300031231\|Ga0170824_118423410	Not Available	911	Open in IMG/M
3300031708\|Ga0310686_102741655	Not Available	502	Open in IMG/M
3300031962\|Ga0307479_10000159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	62639	Open in IMG/M
3300032160\|Ga0311301_12672685	Not Available	551	Open in IMG/M
3300032174\|Ga0307470_10409682	Not Available	961	Open in IMG/M
3300032261\|Ga0306920_101706504	Not Available	892	Open in IMG/M
3300032261\|Ga0306920_103759099	Not Available	556	Open in IMG/M
3300032515\|Ga0348332_14674881	Not Available	667	Open in IMG/M
3300032783\|Ga0335079_10000111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	94904	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Host-Associated	Host-Associated	2.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.52%
Aquatic	Environmental → Aquatic	14.56%
Arthropoda	Host-Associated → Arthropoda	1.94%
Plants	Host-Associated → Plants	0.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.55%
Freshwater	Environmental → Aquatic → Freshwater	4.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	4.85%
Sediment	Environmental → Aquatic → Sediment	4.85%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.94%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.14%
Loam	Environmental → Terrestrial → Soil → Loam	14.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.88%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	4.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.85%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.91%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.97%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.53%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.83%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	4.85%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.91%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Bulk Soil	1.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.94%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.94%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.97%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.97%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.97%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.97%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009097	Bulk soil microbial communities from Harvard Forest, USA - 2Bulk_unsorted metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027179	Bulk soil microbial communities from Harvard Forest, USA - 2Bulk_unsorted metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015750581	3300000364	Soil	VTRERVERFLKNLASVLGYCIAEDLEVLETAIPALVCVGILWLIGMAVYDFILDPHVITAATLDSVSINPDKWIPR*
JGI12270J11330_100223524	3300000567	Peatlands Soil	MIRERIERFVKNLISALGHCIIEDPEVLGIAILALACVGVFWLVGIAVYDFILDPHVTTAAALDALSIDPDKWIPR*
JGI1027J11758_129347151	3300000789	Soil	LFVTRERVERFLKNLASVLGYCIAEDLEVLETAIPALVCVGILWLIGMAVYDFILDPHVITAATLDSVSINPDKWIPR*
Ga0066388_1006386023	3300005332	Tropical Forest Soil	VIGVSGSWGEKRVRIERFFKNLASALGHCIIEDPEVLGIVILALVGVGFFWLVGVAFYDFIFDPHVTTTAALDSLSINPDKWISR*
Ga0070714_1022281211	3300005435	Agricultural Soil	VTREGIERFFKNLASALGHCIFEDAEVLGVVIPALLCVGILWLIGVAVYDFILDPHVTTAAALDAVSIDPDKWFPC*
Ga0070708_1015295182	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTRERIERFFKNLASALGACIFEDAEVLGIVIPALVCVGILWLIGVAMYDFVLDPHITTAAAPDSLSIDPDKWFPR*
Ga0070707_1007073452	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IERFFKNLASALGHCIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR*
Ga0070761_110935051	3300005591	Soil	FVKNSISTLGHCLIEDPEVQDVVILSLVCVGVFWLVGVAVYDFILDPHVTTVASLDSLSINPDKWIQKI*
Ga0066903_1025824872	3300005764	Tropical Forest Soil	PSRTQACLPTPVPVVVPGRIERFLKNVASALGYCIAEDVEVLDTAIAALICVGILWLIGMVVYDLILDPHVTTAATLDSLSINPDKWNPR*
Ga0066903_1072996931	3300005764	Tropical Forest Soil	VIRERIERFVKNLAAALGYCIAEDVELLDTAIPALICVGILWFVGMAVYDFFLDPHVVTAATLDSL
Ga0070717_113585352	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTRERIERFFKNLASALGACIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR*
Ga0075029_1000416953	3300006052	Watersheds	MMRERIERFLKNLASALGYCIAEEVDVLETAIPALICVGILSLIGMAVYDFILDPHVIKAATLDSVSINPDKWIPR*
Ga0075017_1014530091	3300006059	Watersheds	LAVTRERIERFFKNLASALGHCIFEDAEVLGIVIPALGCVGILWLIGVAVYDFVLDPHITTAAALDLLSIDPNKWIPR*
Ga0075015_1000233033	3300006102	Watersheds	VTRERIERFFKNLASALGHCIFEDAEVLGIVIPALGCVGILWLIGVAVYDFVLDPHITTAAALDLLSIDPNKWIPR*
Ga0070716_1003267962	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VTWERIERFFKNLASALGHCIFEDAEVLGIVIPVLVCLGIFWLIGMAVYDFVLDPHITTAAALDSLSIDPDKWFPR*
Ga0073928_106672552	3300006893	Iron-Sulfur Acid Spring	VTRERIERFFKNLASALGHCIFEDAEVLGIVIPVLVCLGIFWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR*
Ga0102924_10489035	3300007982	Iron-Sulfur Acid Spring	VVRERIERFLKNLASAFGYCIAEDVGVLDTAIPALICVGILCFVGMAVYDFVLDPHVITAATLDSLSINPDKWIPR*
Ga0099828_105056841	3300009089	Vadose Zone Soil	VTRERIERFFKNLASALGHYIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR*
Ga0058709_106122	3300009097	Bulk Soil	VTRERIEQFFKNLASALGRCIFEDAEVLGMVIPALVCVSILWLIGVAVYDFILNPYLTMAATLDSLSINPDKWIPR*
Ga0123355_104250462	3300009826	Termite Gut	VARERIERYLKNLASALGYSIAEDFEVLDTAIPALVCVGILWLVGMAVYDFILDPHLVTAATLDSLSINPDKWIPR*
Ga0123355_116360941	3300009826	Termite Gut	VARERIERFLKNLASALGYCIAEDFEVLDTAIPALICVGILWFVGMAVYDFILDPHLVTAATLDSLSINPDKWIPR*
Ga0126373_100595604	3300010048	Tropical Forest Soil	MLEFLAVTRKRIERFFKSLASALGHCIIEDVDTLGIVIPALVCVGILWLIGIAVYDFVLDPHITTVAALDSLSIDPNKWFPR*
Ga0126373_117611551	3300010048	Tropical Forest Soil	VIRERIERFLKNLAAALGYCIAEDVDVLDTAIPALVCVGILWFVGMAVYDFILDPHVVTAATLDSLSINPDKWIPR*
Ga0074044_100298135	3300010343	Bog Forest Soil	LVVTRERIERFFKNLASALGHCIFEDAEVLGVVIQALVCVGILWLIGVAVYDFIVDPHVTTAAARCSLY*
Ga0126370_104426581	3300010358	Tropical Forest Soil	VIRERIECFLKNLAAALGYCIAEDVEVLGTAIPALICVGILWFIGMAVYDFILDPHVVTAATLDSLSINPDKWIPR*
Ga0126372_132233751	3300010360	Tropical Forest Soil	VARERIERFLKNLASALGYCIAEDFDVLDTAIPALICVGILWFIGMAIYDFILDPHVLTAATLDSLSINPDKWIPR*
Ga0126378_102541594	3300010361	Tropical Forest Soil	VPGRIERFLKNVASALGYCIAEDVEVLDTAIAALICVGILWLIGMVVYDLILDPHVITAATLDSLSINPNKWIPR*
Ga0126379_121808231	3300010366	Tropical Forest Soil	VIRERIERFLKNLAAALGYRIAEDVEVLDTAIPALICVGILWFIGMAVYDFILDPHVVTAATLDSLSINPDKWIPR*
Ga0126379_131657541	3300010366	Tropical Forest Soil	KNLASTLGFCVLEDAEVLEVVIPALVFMGILWFVGSVFYALVLDPHITTAAARDALSINPDKWIPR*
Ga0126381_1005703243	3300010376	Tropical Forest Soil	VPGRIERFLKNVASALGYCIAEDVEVLDTAIAALICVGILWLIGMVVYDLILDPHVTTAATLDSLSINPDKWNPR*
Ga0126381_1014152691	3300010376	Tropical Forest Soil	RIERFFNNLAAALGYCIAEDVEVLDTAIPALICVGILWFVGMAVYDFILDPHVVTAATLDSLSINPDKWIPR*
Ga0126381_1020146651	3300010376	Tropical Forest Soil	LAVTRDRIERFFKDLASAIGHCIVEDGEVLGTVILALVCVAILWFIGEALYEFILDPHVTTATALDSLSINPDKWISH*
Ga0126381_1028953821	3300010376	Tropical Forest Soil	LAVAREGIQRFFKNLASALGHCIMEDAEALAIVVPALVCVGIFWLMGIAIYDLILGSHLTTAATLDSLSINPEKWIPR*
Ga0126381_1029344442	3300010376	Tropical Forest Soil	VCGGRCPVSDAKILAVTRERIERFFKNLASALGHCILEDAGTLGIVIPALVCVGVLWLSGMALYEFVLDPHITTAAALD
Ga0126381_1036797311	3300010376	Tropical Forest Soil	VKRERITRFFKNLASTLGFCVLEDAEVLEVVIPALVFMGILWFVGSVFYALVLDPHITTAAARDALSINPDKWIPR*
Ga0126383_105197042	3300010398	Tropical Forest Soil	VKRERITRFFKNLASTLGFCVLEDAEVLEVVIPALVFMGILWFVGSVVYDLVLDPHITTAAARDALSINPDKWIPR*
Ga0126352_10453142	3300010859	Boreal Forest Soil	VTRERIERFFKNLASALGHCIFEDAEVLGMVIPALVCVGILWLIGVAVYDFILDPHVTTAATLDSLSINPDKWISR*
Ga0150983_101946844	3300011120	Forest Soil	MTWEPIERFFKNLASSLGHCIFEDAEVLGMVILALVCVGTLWLIGVAVYDFILDPDVTTAATLASRSINPHKWISR*
Ga0150983_166802661	3300011120	Forest Soil	VTRERIERFFKNLASALGHCIFEDAEVLEIVIPVLVYLGIFCIFWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR*
Ga0137392_103517111	3300011269	Vadose Zone Soil	LGVTRERIERFFKNLASALGHCIFEDAEVLGVVIPALVCVGILWLIGVAVYDFILDPHVTTAAALDALSIDPDKWFPR*
Ga0137393_112430312	3300011271	Vadose Zone Soil	ESSARILGVTRERIERFFKNLASALGHCIFEDAEVLGVVIPALVCVGILWLIGVAVYDFILDPHVTTAAALDALSIDPDKWFPR*
Ga0137380_111004842	3300012206	Vadose Zone Soil	VTRERVERFFKNLASALGACIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR*
Ga0137377_112876772	3300012211	Vadose Zone Soil	VTRERVERFFKNLASALGHCIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR*
Ga0150985_1221179822	3300012212	Avena Fatua Rhizosphere	VTRERIERFFKNLALALAHCIFEDAEVLGSVIPALVCVGILWLVGVVAYDFIFDPHVTTAAALDALSIDPNKWFPR*
Ga0137366_101886202	3300012354	Vadose Zone Soil	VLNLVVARERIERFLKDLATALGYCIAEDVEVLGTAIPALICLGILWFVGMAVYDFILDPHVITAATLDSLSINPDKWIPR*
Ga0137375_101858012	3300012360	Vadose Zone Soil	VTQERIERFFKNLASALGHCIFEDAEVLGIVIPALVCLGIFWLIGVAVYDFVLDPHITTAATLDLLSIDPDKWFPR*
Ga0137390_118742311	3300012363	Vadose Zone Soil	SARILGVTRERIERFFKNLASALGHCIFEDAEVLGVVIPALVCVGILWLIGVAVYDFILDPHVTTAAALDALSIDPDKWFPR*
Ga0137398_101578152	3300012683	Vadose Zone Soil	LKNLASALGHCLVEDADVMGIVVPALVCVGIFFVAGIVIYDLILDPHVTTAGALESLSINPDKWIPR*
Ga0137416_102854761	3300012927	Vadose Zone Soil	VTRERIERFFKNLASALGHCIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTRAALDSLSIDPDKW
Ga0137416_116700252	3300012927	Vadose Zone Soil	LKNLASALGHCLVEDADVMGIVVPALVCVGIFFVAGIVIYDLILDPHVTTAGALESLSINPDK
Ga0126369_125272111	3300012971	Tropical Forest Soil	VIRERIECFLKNLAAALGYCIAEDVEVLGTAIPALICVGILWFIGMAVYDFILDPHVVTAATLDSLSINPNKWIPR*
Ga0181532_100266053	3300014164	Bog	VTREGIERFFKNLASALGHCIFEDAEVLGMVIPALVCLGILWLIGVAVYDLILDPHVTTAAGLDALSIDPDKWFPR*
Ga0182035_121088051	3300016341	Soil	MRRNRCRLSDARILAVTRERIERFFKNLVSALGQCIFEDTDTMGIVIPALVCVGILWLIGMAVYEFVLDPHITTAAALDSLSIDPNKWFPR
Ga0182037_109745942	3300016404	Soil	VARERIERFLKNLASALGYCIAEDLEVLDTAIPALICVGILWLVGMAVYDFILDPHMVTAATLDSLSINPDKWIPR
Ga0181505_106143102	3300016750	Peatland	TTRIASAEGIPSVNALVSTVVGSCARILAVTREGIERFFKNLASALGHCIFEDAEVLGMVIPALVCLGILWLIGVAVYDLILDPHVTTAAGLDALSIDPDKWFPR
Ga0187782_103418682	3300017975	Tropical Peatland	VARERVERFLKNLASALGYCIAEDIEVLDAAIPALIGVGVFWFVGMAVYDFVLDPHVITSAALSSLSINPEKWIRH
Ga0187872_100066933	3300018017	Peatland	LWLQQWWGCARHKESSARILAMTREPIERFFKNLASALGHCIFEDAEVLGMVILALVCVGTWLIGVAVYDFILDPHVTTAATLDSLSISPDKWISR
Ga0187787_104126731	3300018029	Tropical Peatland	VARERIERFLKDVASAVGYCIAEDVEVLDTAIAALICVGILWFVGMVVYDFILDPHVITAAALDSLSINPDKWIP
Ga0187788_101340032	3300018032	Tropical Peatland	VARERIERFLKDVASAVGYCIAEDVEVLDTAIAALICVGILWFVGMVVYDFILDPHVITAAALDSLSINPDKWIPR
Ga0187858_102922652	3300018057	Peatland	LQQWWGCARHKESSARILAMTREPIERFFKNLASALGHCIFEDAEVLGMVILALVCVGTWLIGVAVYDFILDPHVTTAATLDSLSISPDKWISR
Ga0193751_10198334	3300019888	Soil	MTREPIERFFKNLASALGHCIFEDAEVLGMVILALVCVGTLWLIGVAVYDFILDPHVTTAATLDSLSINPDKWISR
Ga0193751_10238003	3300019888	Soil	LFTTLWGCARHRESGARILAVTRERIERFFKNLASALGACIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR
Ga0210403_101777303	3300020580	Soil	LSATACFRQLLDCTRHWESGARILGVTRERIERFFKNLASALGQCIFEDAEFLGVVIMALVCICIVWLIGVAVYDFTCDFILDPHVTTASALDALSIDPDKWFPR
Ga0210403_113478051	3300020580	Soil	VLKFQPMPRERINRFFKNLGSAFGRCIFEDAEVLGIAIPALVGVGILLLIGVAVYDFVLDPHVTTAAALDSLSIDPDKWLPR
Ga0210399_1000006045	3300020581	Soil	VTRERIERFFKNLASALGQCIFEDAEFLGVVIMALVCICIVWLIGVAVYDFTCDFILDPHVTTASALDALSIDPDKWFPR
Ga0210401_104275032	3300020583	Soil	MMRERIERFFKNLASALGHCIFEDAEALVIVIPALVCVGILWLIGVAVYDFALDPHVTTAATLDSLSISPDKWISR
Ga0210401_113048882	3300020583	Soil	VARERIERFLKNLASALGYCIAEDFEVLDTAIPALICAGILWFIGMAVYDFILDPHVITAATLDSLSISPDKWIPR
Ga0215015_108019686	3300021046	Soil	VLTPFTTLKGCARHRESGARILAVTRERIERFFKNLASALGACIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALNSLSIDPDKWFPR
Ga0210404_102636401	3300021088	Soil	MTWEPIERFFKNLASALGHCIFEDAEVLGMVILALVCVGTLWLIGVAVYDFILDPDVTTAATLASRSINPHKWISR
Ga0210406_1000633717	3300021168	Soil	MRERIERFFKNLASALGHCVFEDAEVLGIVIPVLVCLGIFWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWICR
Ga0210408_103417682	3300021178	Soil	VARERIERFLKNLASALGYCIAEDFEVLDTAIPALICVGFLWFIGMAVYDFILDPHVITAATLDSLSISPDKWIPR
Ga0210396_104874523	3300021180	Soil	VARERIERFLKNLASALGYCIAEDFEVLDTAIPALICVGILWFIGMAVYDFILDPHVITAATLDSLSISPDKWIPR
Ga0210389_101696874	3300021404	Soil	VTRERIERFFKNLASALGHCIFEDAEVLEIVIPALVCVGMLWLIGVAVYDVVLDPHITTAASLDSLSINPDKWISR
Ga0210389_106960672	3300021404	Soil	VTPERIERFFKNLASALGHCVFEDAEVLGIVIPVLVCLGIFWLIGVAVYDFVLDPHITTAAALGLALYRPR
Ga0210387_112236991	3300021405	Soil	DCARHRESSARILGVTRERIERFFKNLASALGHCIFEDAEVLSVVIPALVCVGILWLIGVFVYDFVLDPHITTAASLDSLSINPDKWISR
Ga0210383_104979672	3300021407	Soil	VTRERIERFFKNLASALGHCVFEDAEVLGIVIPVLVCLGIFWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWICR
Ga0210410_116255131	3300021479	Soil	VTRERIDRFFKNLASVLGHCIFEDAEVLGIVIPVLVCLGIFWLFGVAVYDFVLDPHITTAAALDSLSIDPDKWICR
Ga0210409_101225663	3300021559	Soil	VARERIERFLKNLASALGYCIAEDFEVLDTAIPALICVGILWFIGIAVYDFILDPHVITATTLDSLSISPDKWIPR
Ga0126371_103065782	3300021560	Tropical Forest Soil	VPGRIERFLKNVASALGYCIAEDVEVLDTAIAALICVGILWLIGMVVYDLILDPHVTTAATLDSLSINPDKWNPR
Ga0213853_111739862	3300021861	Watersheds	VTRERIERFFKNLASALGHCIFEDAEVLGIVIPALGCVGILWLIGVAVYDFVLDPHITTAAALDLLSIDPN
Ga0242662_101892461	3300022533	Soil	PERIERFFKNLASALGHCVFEDAEVLGIVIPVLVCLGIFWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWICR
Ga0212123_100539545	3300022557	Iron-Sulfur Acid Spring	VTRERIERFFKNLASALGHCIFEDADVLEMVIPALVCLGIFWLIGVAVYDFILDPHVMTAASLDSLSINPDKWISR
Ga0212123_100923995	3300022557	Iron-Sulfur Acid Spring	VVRERIERFLKNLASAFGYCIAEDVGVLDTAIPALICVGILCFVGMAVYDFVLDPHVITAATLDSLSINPDKWIPR
Ga0212123_105854522	3300022557	Iron-Sulfur Acid Spring	VTRERIERFFKNLASALGHCIFEDAEVLGIVIPVLVCLGIFWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR
Ga0207646_104144421	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	CERKRLFTTLWGCARHRESDARILAVTRERIERFFKNLASALGHCIFEDAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR
Ga0207664_116871682	3300025929	Agricultural Soil	VTREGIERFFKNLASALGHCIFEDAEVLGVVIPALLCVGILWLIGVAVYDFILDPHVTTAAALDAVSIDPDKWFPC
Ga0207665_103047942	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTWERIERFFKNLASALGHCIFEDAEVLGIVIPVLVCLGIFWLIGMAVYDFVLDPHITTAAALDSLSIDPDKWFPR
Ga0209648_100370714	3300026551	Grasslands Soil	VTRERIERFFKNLASALGACIFEEAEVLGIVIPALVCVGILWLIGVAVYDFVLDPHITTAAALDSLSIDPDKWFPR
Ga0208955_1004552	3300027179	Bulk Soil	VTRERIEQFFKNLASALGRCIFEDAEVLGMVIPALVCVSILWLIGVAVYDFILNPYLTMAATLDSLSINPDKWIPR
Ga0209517_100474932	3300027854	Peatlands Soil	MIRERIERFVKNLISALGHCIIEDPEVLGIAILALACVGVFWLVGIAVYDFILDPHVTTAAALDALSIDPDKWIPR
Ga0209698_101016673	3300027911	Watersheds	MMRERIERFLKNLASALGYCIAEEVDVLETAIPALICVGILSLIGMAVYDFILDPHVIKAATLDSVSINPDKWIPR
Ga0209698_105216181	3300027911	Watersheds	LAVTRERIERFFKNLASALGHCIFEDAEVLGIVIPALGCVGILWLIGVAVYDFVLDPHITTAAALDLLSIDPNKWIPR
Ga0209526_100619881	3300028047	Forest Soil	VTRERIERFFKNLASALGHCIFEDAEALSVVIPALVRIGILWLIGVAVYDFILDPHVTTAAALDALSIDPDKWFPR
Ga0137415_101841832	3300028536	Vadose Zone Soil	VALTTLWGRARHRESGARILAVTRERIERFFKNLASALGHCIFEDAEVLGIVIPTLVCLGILWLIGVAVYDFVLDPHITTRAALDSLSIDPDKWFPR
Ga0170824_1184234101	3300031231	Forest Soil	KRWLQQAWSCARHKESSAKMLAVTRERIERFFKNLASALGHCIFEDAEVLGIVIPALVWVGILWLIDVAVYDFVLDPHITAAAALDSLSIDPDKWFLR
Ga0310686_1027416552	3300031708	Soil	ARILTVTRERIERFFKNLASALGHCIFEDAEVLEMVIPALVCVGILWLIGVAVYDFVLDPHITTAASLDSLSINPDKWISR
Ga0307479_1000015963	3300031962	Hardwood Forest Soil	MSALACSQQCGGPSGHNGSGARILAVTKERIERFFKNLASALGHCILEDAEVLGVVIPALVCVGILWLIGVAVYDFILDPHITTAAALDSLSIDPDRWFPR
Ga0311301_126726851	3300032160	Peatlands Soil	MTREPIERFFKNLASALGHCIFEDAEVLGMVIPALVCVGILWLIGVAVYDFILDPHVTTAATLDSLSINPDKWFSR
Ga0307470_104096821	3300032174	Hardwood Forest Soil	ARILGVTLERIERFFKNLASALGHCIFEDAEVLGVVIPALVCVGILWLIGVAVYDFILDPHVTTAAALDALSIDPDKWFPR
Ga0306920_1017065041	3300032261	Soil	VARERIERFLKNVASALGYCIAEDVEVLDTAIPALICVGILWFIGMVVYDFILDPHVITAATLDSLSINPDKWIPR
Ga0306920_1037590991	3300032261	Soil	VARERIERFLKNLASALGYCIAEDLEVLDTAIPALICVGILWLVGMAVYDFILDPHMVTAATLESLSINPDKWIPR
Ga0348332_146748811	3300032515	Plant Litter	VTRERIERFFKNLASALGHCIFEDADVLEMVIPALVCLGIFWLIGVAVYDFILDPHVTTAASLDSLS
Ga0335079_1000011181	3300032783	Soil	VIRERIERFLKNLAAALGYCVAEDVDVLDTAIPALICVGILWFVGMAVYDFILDPHVVTAATLDSLSINPDKWIPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F099756

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences