Metagenome / Metatranscriptome Family F100479

Basic Information
Family ID	F100479
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	40 residues
Representative Sequence	MGVETKKMANSIAAAGGNFGDQLKSWPERIKTFYNDVRT
Number of Associated Samples	98
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.04 %
% of genes near scaffold ends (potentially truncated)	97.06 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (69.608 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.628 % of family members)
Environment Ontology (ENVO)	Unclassified (21.569 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.784 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.22% β-sheet: 0.00% Coil/Unstructured: 44.78%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00471	Ribosomal_L33	33.33
PF03144	GTP_EFTU_D2	21.57
PF03143	GTP_EFTU_D3	18.63
PF03946	Ribosomal_L11_N	0.98
PF14492	EFG_III	0.98
PF02357	NusG	0.98
PF00584	SecE	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0267	Ribosomal protein L33	Translation, ribosomal structure and biogenesis [J]	33.33
COG0080	Ribosomal protein L11	Translation, ribosomal structure and biogenesis [J]	0.98
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.98
COG0690	Preprotein translocase subunit SecE	Intracellular trafficking, secretion, and vesicular transport [U]	0.98
COG2443	Preprotein translocase subunit Sss1	Intracellular trafficking, secretion, and vesicular transport [U]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.61 %
Unclassified	root	N/A	30.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.61 %
Unclassified	root	N/A	30.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.61 %
Unclassified	root	N/A	30.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.96 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.39 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.75 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.39 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.75 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.39 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.75 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.39 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	7.84 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.98 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.39 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.92 %
Blastopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula	0.98 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.39 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.92 %
Blastopirellula marina	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → Blastopirellula marina	0.98 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.39 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3.92 %
Blastopirellula marina DSM 3645	strain	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → Blastopirellula marina → Blastopirellula marina DSM 3645	0.98 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.98 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101311577	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300004474\|Ga0068968_1500983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	604	Open in IMG/M
3300004607\|Ga0068948_1327407	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	679	Open in IMG/M
3300004614\|Ga0068956_1398157	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005336\|Ga0070680_100917876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	756	Open in IMG/M
3300005445\|Ga0070708_100084003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2888	Open in IMG/M
3300005450\|Ga0066682_10891632	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	531	Open in IMG/M
3300005534\|Ga0070735_10398262	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005568\|Ga0066703_10265153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1041	Open in IMG/M
3300006162\|Ga0075030_101445259	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300007076\|Ga0075435_100216041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	1627	Open in IMG/M
3300009521\|Ga0116222_1087536	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300009624\|Ga0116105_1082024	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300009792\|Ga0126374_10761382	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300010359\|Ga0126376_12164040	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300010376\|Ga0126381_100739479	Not Available	1409	Open in IMG/M
3300010399\|Ga0134127_11090177	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300011054\|Ga0138523_1102550	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300011120\|Ga0150983_11157048	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300011271\|Ga0137393_11029798	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300012083\|Ga0154000_1109393	Not Available	568	Open in IMG/M
3300012208\|Ga0137376_11702524	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300012356\|Ga0137371_10736568	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300012363\|Ga0137390_10672248	Not Available	999	Open in IMG/M
3300012378\|Ga0134025_1087200	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300012513\|Ga0157326_1081725	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012925\|Ga0137419_10880806	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012927\|Ga0137416_11688952	Not Available	577	Open in IMG/M
3300012955\|Ga0164298_10178831	Not Available	1220	Open in IMG/M
3300012976\|Ga0134076_10282821	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300012989\|Ga0164305_11554667	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012989\|Ga0164305_11582942	Not Available	584	Open in IMG/M
3300013296\|Ga0157374_10601385	Not Available	1110	Open in IMG/M
3300013296\|Ga0157374_10650975	Not Available	1065	Open in IMG/M
3300013308\|Ga0157375_11888086	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300014493\|Ga0182016_10407980	Not Available	803	Open in IMG/M
3300015054\|Ga0137420_1495457	Not Available	3425	Open in IMG/M
3300016319\|Ga0182033_10511397	Not Available	1033	Open in IMG/M
3300017822\|Ga0187802_10117608	Not Available	1006	Open in IMG/M
3300017934\|Ga0187803_10181141	Not Available	829	Open in IMG/M
3300018047\|Ga0187859_10483744	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300018047\|Ga0187859_10878949	Not Available	516	Open in IMG/M
3300019242\|Ga0181502_1203354	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300019787\|Ga0182031_1266726	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1835	Open in IMG/M
3300019887\|Ga0193729_1275057	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300020579\|Ga0210407_11223457	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300020582\|Ga0210395_10036922	All Organisms → cellular organisms → Bacteria → Acidobacteria	3583	Open in IMG/M
3300021088\|Ga0210404_10235189	Not Available	992	Open in IMG/M
3300021404\|Ga0210389_10833912	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300021406\|Ga0210386_10981267	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300021407\|Ga0210383_10133205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2106	Open in IMG/M
3300021432\|Ga0210384_11055388	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300021478\|Ga0210402_11723919	Not Available	553	Open in IMG/M
3300021559\|Ga0210409_11209831	Not Available	631	Open in IMG/M
3300022507\|Ga0222729_1009284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1004	Open in IMG/M
3300022531\|Ga0242660_1202945	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300022532\|Ga0242655_10207800	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300022711\|Ga0242674_1006761	Not Available	1115	Open in IMG/M
3300022716\|Ga0242673_1083765	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300022716\|Ga0242673_1090510	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300022726\|Ga0242654_10138077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	803	Open in IMG/M
3300023255\|Ga0224547_1024208	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300023551\|Ga0247546_106093	Not Available	516	Open in IMG/M
3300024179\|Ga0247695_1013396	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300025899\|Ga0207642_10472773	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300025916\|Ga0207663_10452611	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300025945\|Ga0207679_11899417	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300026078\|Ga0207702_10919190	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300026142\|Ga0207698_10361849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1374	Open in IMG/M
3300026318\|Ga0209471_1219071	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300026329\|Ga0209375_1058220	All Organisms → cellular organisms → Bacteria → Acidobacteria	1888	Open in IMG/M
3300026335\|Ga0209804_1299481	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300026530\|Ga0209807_1013112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4080	Open in IMG/M
3300026548\|Ga0209161_10033615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3510	Open in IMG/M
3300026550\|Ga0209474_10339166	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300026786\|Ga0207497_105815	Not Available	509	Open in IMG/M
3300026847\|Ga0207802_1020007	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300027029\|Ga0208731_1037473	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300027035\|Ga0207776_1023705	Not Available	809	Open in IMG/M
3300027737\|Ga0209038_10062569	Not Available	1115	Open in IMG/M
3300027867\|Ga0209167_10009916	All Organisms → cellular organisms → Bacteria	4532	Open in IMG/M
3300027869\|Ga0209579_10040787	Not Available	2497	Open in IMG/M
3300027879\|Ga0209169_10134089	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300027908\|Ga0209006_11417238	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300027986\|Ga0209168_10155937	Not Available	1156	Open in IMG/M
3300029908\|Ga0311341_10507910	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300029953\|Ga0311343_10467058	Not Available	1134	Open in IMG/M
3300030007\|Ga0311338_10403554	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Blastopirellula → Blastopirellula marina → Blastopirellula marina DSM 3645	1466	Open in IMG/M
3300030524\|Ga0311357_11575498	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300030588\|Ga0210283_1657780	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300030617\|Ga0311356_11213177	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300030688\|Ga0311345_10206584	Not Available	1985	Open in IMG/M
3300030963\|Ga0265768_117178	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031708\|Ga0310686_108956116	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300031788\|Ga0302319_10615642	Not Available	1125	Open in IMG/M
3300031942\|Ga0310916_10937937	Not Available	724	Open in IMG/M
3300031956\|Ga0316032_106407	Not Available	582	Open in IMG/M
3300032174\|Ga0307470_11316523	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300032892\|Ga0335081_10813054	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300032893\|Ga0335069_11778770	All Organisms → cellular organisms → Bacteria → Acidobacteria	655	Open in IMG/M
3300032955\|Ga0335076_10741543	Not Available	864	Open in IMG/M
3300033405\|Ga0326727_10450808	Not Available	1147	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.20%
Host-Associated	Host-Associated	9.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.35%
Plants	Host-Associated → Plants	8.82%
Aquatic	Environmental → Aquatic	7.84%
Fungi	Host-Associated → Fungi	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.53%
Peat	Environmental → Terrestrial → Peat	8.82%
Freshwater	Environmental → Aquatic → Freshwater	6.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.92%
Sediment	Environmental → Aquatic → Sediment	0.98%
Mycelium	Host-Associated → Fungi → Mycelium	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.82%
Loam	Environmental → Terrestrial → Soil → Loam	9.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.86%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004474	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004607	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004614	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011054	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012083	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC084 MetaG	Host-Associated	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012378	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023255	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 10-14	Environmental	Open in IMG/M
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026786	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-11 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030588	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE011SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031956	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1013115771	3300002245	Forest Soil	MGVETKKKMANSIASAGGNFGDQIKSWPERVKTFYNDVRTETRKVT
Ga0068968_15009831	3300004474	Peatlands Soil	MPERARRSMGVETKKMANSIASAGENFGDRLKSWPERVKTFYNDV
Ga0068948_13274071	3300004607	Peatlands Soil	MGVETKKMANSIASAGENFGDRLKSWPERIKSFYNDVRTEMRKV
Ga0068956_13981574	3300004614	Peatlands Soil	MSVETKKMANLAAAGGNFGDQIKSWPERIRTFYNDVRTEMRKV
Ga0070680_1009178762	3300005336	Corn Rhizosphere	MGVETKKMADSLVAAGDNWGDRIKSWPERIKAFYNDVRTEMKK
Ga0070708_1000840031	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGAGTKKMANTVAAANDDSWGGKMKSLPERIKSFYNDVRTEMRKV
Ga0066682_108916323	3300005450	Soil	MGVGTGTKKMANSIAAAGDEGFGGIKSWPERIKSFYSDVRTEMRKV
Ga0070735_103982621	3300005534	Surface Soil	MSVETKKMANSIAVGSFGERLKSWPEKVRSFYNEV
Ga0066703_102651531	3300005568	Soil	MGVETKKMANTLAAAGDFGDRIRSWPERIKGFYSDVR
Ga0075030_1014452591	3300006162	Watersheds	MAVETKKMSNLAAMGGNFGDQIKAWPERIRAFYNDVRSEM
Ga0075435_1002160411	3300007076	Populus Rhizosphere	MANTVAAANDDSWGGKMKSLPERIKSFYNDVRTEMRKV
Ga0116222_10875361	3300009521	Peatlands Soil	MGVETKKMANSIAAAGGSFGDRIKSWPEKIRTFYNDVRTETRKVT
Ga0116105_10820241	3300009624	Peatland	MGVETKKMANSMASAGGNFAEQIKSWPERVKTFYNDVRTE
Ga0126374_107613821	3300009792	Tropical Forest Soil	MSVETKKMANSIAATGGPFLDRIKSWLDKVRGFYNDVRTEMRKVT
Ga0126376_121640403	3300010359	Tropical Forest Soil	MSVETRKMATSIAEGGGNFGERMKSWPDKIKTFYNDVRMEMKKV
Ga0126381_1007394793	3300010376	Tropical Forest Soil	MSIETKKMSNSIAATGGNFGGFKSWPEKVRTFYNEVRNEMRK
Ga0134127_110901771	3300010399	Terrestrial Soil	MGAGTKKMANSIAAAGDDSFGGKVKSLPERVKVFYNDVRT
Ga0138523_11025503	3300011054	Peatlands Soil	MAVETKKMANLAAASGNFGDQIKSWPERIRTFYNDVRTEMR
Ga0150983_111570481	3300011120	Forest Soil	MAVETKKMANLAAAGGSFGDQIKSWPDRIKVFYNDVRSEMRK
Ga0137393_110297984	3300011271	Vadose Zone Soil	MGVETKKMASSSAAAGGNFGDQIKSWPQRVKSFYN
Ga0154000_11093933	3300012083	Attine Ant Fungus Gardens	LEKVEERQYMGVETKKMSNSIASAGDFGDRLKAWPERAKSFYNDVRTE
Ga0137376_117025242	3300012208	Vadose Zone Soil	MGVETKKMANTLAAAGDFGDRIRSWPERIKGFYSD
Ga0137371_107365681	3300012356	Vadose Zone Soil	MGVGTGTKKMANSIAAAGEGGFGGIKSWPERIKSFYNDVRTEMRKVT
Ga0137390_106722483	3300012363	Vadose Zone Soil	MGVETKKMANSIASASENFGGRLKSWPERIKSFYNDV
Ga0134025_10872003	3300012378	Grasslands Soil	MAVGTGTKKMANSIATAGESGFGGIKSWPERIKSFYNDVRTEMR
Ga0157326_10817251	3300012513	Arabidopsis Rhizosphere	MSVETKKMANSIVAAGGSFGERLKSWPDKVKTFYNDVRSEMRKV
Ga0137419_108808063	3300012925	Vadose Zone Soil	MGVDTKKMANSITAAGDNFGDRMKSWPQRVKTFYN
Ga0137416_116889523	3300012927	Vadose Zone Soil	MGVETKKMANSIAAAGENFGGRIKSWPERVRTFYND
Ga0164298_101788313	3300012955	Soil	MSVETKKMANSIVTASSSFGDRVKAWPERIRTFYNDVRTETRKVTA
Ga0134076_102828213	3300012976	Grasslands Soil	MAVGTKKMAKSIAAAGESGFGGIRSWPERIKAFYNDV
Ga0164305_115546671	3300012989	Soil	MSVETKKMANLAAAGGSFGDQIKSWPDRIKVFYNDVRSE
Ga0164305_115829422	3300012989	Soil	MGVETKKMGNSIVAAGGSFGDRLKSWPERIKTFYNDVRTEMK*
Ga0157374_106013853	3300013296	Miscanthus Rhizosphere	MGVETKKMADSIVAAGDNWGDRIKSWPDRIKSFYNDV
Ga0157374_106509753	3300013296	Miscanthus Rhizosphere	MAVETKKMANTLASAGGSFGDRIKSWPERTMSFYNAVPTEM
Ga0157375_118880861	3300013308	Miscanthus Rhizosphere	MGVEAKKMANSLAEAGDNLGDRLKSWPLRLKTFYNDVRTEM
Ga0182016_104079804	3300014493	Bog	MGVETKKMANSIATTSGDFGNRLRSWPDRIKTFYG
Ga0137420_14954573	3300015054	Vadose Zone Soil	MGVEAKKMASSIASAGDSFGDRIKSWPERIKSFTTMCARR*
Ga0182033_105113974	3300016319	Soil	VIAVETKKMSNALTAAGGNWMDRIKTWPEQIKTFYNDVRTEMK
Ga0187802_101176084	3300017822	Freshwater Sediment	MAVETKKMSNLATIGGNFGDQIKAWPERIRAFYNDVRSEM
Ga0187803_101811411	3300017934	Freshwater Sediment	MGVKTEKMANSIAAAGDNFGGRLKAWPERIKTFYN
Ga0187859_104837441	3300018047	Peatland	MGVETKKMANSIATASENFGDRIKSWPERIKSFYNDVRTE
Ga0187859_108789493	3300018047	Peatland	MGVETKKKMANSLAAGGENFGDRLKSWPERIKTFYNDVRTETRKVT
Ga0181502_12033541	3300019242	Peatland	MAVETKSKMANSLTGGNFGEQVKAWPERIKTFYNDV
Ga0182031_12667262	3300019787	Bog	MGVETKKMANSIATTGGDFGDRLRSWPERIKSFYHDVRTEMKK
Ga0193729_12750571	3300019887	Soil	MAVETKKMANSIAAAGGNFGDRLKSFPERIKSFYSDVRTE
Ga0210407_112234571	3300020579	Soil	MSVETKKMANSIVAAGGSFGDQIKSWPERIKTFYNDVR
Ga0210395_1003692212	3300020582	Soil	MGVETKKMANSIATAGENFGDRLKSWPERVKSFYNDVR
Ga0210404_102351891	3300021088	Soil	MAVETKKMANLAEMGGNFGDQIKSWPERIKAFYND
Ga0210389_108339123	3300021404	Soil	MGVETKKMANSIAAAGDNFGDRLKAWPERVKVFYN
Ga0210386_109812674	3300021406	Soil	MAVETKKMANLAAAGGNFGEQMKAWPERIRTFYSDIRSE
Ga0210383_101332051	3300021407	Soil	MGVETKKMANSMASAGGSFGAQIRSWPERVKTFYNDVRTE
Ga0210384_110553881	3300021432	Soil	MAVETKKMANLAAAGGNFGDQIKSWPERVKTFYNDVRGEMRKVT
Ga0210402_117239191	3300021478	Soil	MGVETKKMGNLIAAAGGSFGDRLKSWPERVKTFYNDVRTEM
Ga0210409_112098313	3300021559	Soil	MGVETKKMGNLIAAAGGSFGDRLKSWPERVKTFYNDVRTEMK
Ga0222729_10092844	3300022507	Soil	MANSIASAGENFGDRLKSWPERIKSFYNDVRTEMRKVTA
Ga0242660_12029452	3300022531	Soil	MGVETKKMANSITAAGDFGDRLKAWPERAKSFYNDVRTEMRKV
Ga0242655_102078002	3300022532	Soil	MAVETKKMANLAPFGGIVDRVKSWPEQVRTFYNDVRTEMRKV
Ga0242674_10067613	3300022711	Soil	MANSITTAGSNFGDQIKSWPERVRTFYNDVRTETRKV
Ga0242673_10837654	3300022716	Soil	MAVETKKKMANSIVTAGENFGDRLKSWPERIKSFYNDVR
Ga0242673_10905103	3300022716	Soil	MAVETKKKMANSIATAGENFGDRLKSWPERIKTFYNDV
Ga0242654_101380771	3300022726	Soil	MGVETKKMGNLIAAAGGSFGDRLKSWPERVKTFYNDVR
Ga0224547_10242081	3300023255	Soil	MGVETKKMANSIATAGENFGDRLKSWPERIKTFYNDVRTETRKV
Ga0247546_1060931	3300023551	Soil	MGVETKKKMANSIASAGGNFGDQIKSWPERVKTFYNDVR
Ga0247695_10133961	3300024179	Soil	MGVEAKKMSNSIATAGENFGDKLKSWPERTKTFYN
Ga0207642_104727731	3300025899	Miscanthus Rhizosphere	MANSLAAAGDNFSDRVKSWPQRVKAFYNDVRTEMRKVT
Ga0207663_104526111	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MANTVAAANDDSWGGKMKSLPERIKSFYNDVRTEMRK
Ga0207679_118994171	3300025945	Corn Rhizosphere	MAVGTKKMANTAAAANDDSFGGKVKSIPERIKAFYNDV
Ga0207702_109191903	3300026078	Corn Rhizosphere	MSVETKKMANSIVTASSSFGDRVKAWPERIRSFYNDVRTETRKVTA
Ga0207698_103618493	3300026142	Corn Rhizosphere	MGVETKKMADSLVAAGDNWGDRIKSWPERIKAFYNDVRTEMKKVT
Ga0209471_12190711	3300026318	Soil	MALGAGTKKMANSIAAADDSSFGGRIKSLPERVKAFYNDVRT
Ga0209375_10582201	3300026329	Soil	MGVETKKMANSLAAVGDFGGRLKSWPERIRSFYND
Ga0209804_12994811	3300026335	Soil	MSVETKKMANSIVTASSSFGDRVKAWPERIRSFYNDVRTET
Ga0209807_10131125	3300026530	Soil	MAVGTKKMANSIAAAGEEGFGRIKSWPERIKSFYNDIRTEM
Ga0209161_100336151	3300026548	Soil	MGVETKKMANTLAAAGDFGDRIKSWPERIKTFYNDVRTEMKK
Ga0209474_103391661	3300026550	Soil	MAVGTKKMANSIAAAGEEGFGRIKSWPERIKSFYNDIRTEMRKVTS
Ga0207497_1058151	3300026786	Soil	MSVETKKMANSIVTASSSFGDRVKAWPERIRTFYNDV
Ga0207802_10200071	3300026847	Tropical Forest Soil	MGVEAKKMASTLASAGDNFGDRLKSWPERIKGFYGDV
Ga0208731_10374731	3300027029	Forest Soil	MANSIATVGASFGERLKSWPERVKSFYNDVRTEMRK
Ga0207776_10237051	3300027035	Tropical Forest Soil	MSVETKKMANSIAASGGDFLDRVKSWPDKIKGFYNDVRTEM
Ga0209038_100625691	3300027737	Bog Forest Soil	MGVETKKMANSIASVGENFGDRLKSWPERVKTFYND
Ga0209167_100099161	3300027867	Surface Soil	MAVETKKMANLAEMGGNFGDQIKSWPERIKAFYNDVRTE
Ga0209579_100407875	3300027869	Surface Soil	MSVETKKMSNSLAAAGGNFGDQVKALPERIRTFYNDVRNEMRKV
Ga0209169_101340891	3300027879	Soil	MSVETKKMSNSIVAAGGNFGDQIKAWPERIKTFYNDVRSEMRKVTAPSW
Ga0209006_114172381	3300027908	Forest Soil	MGVETKKKMANSIASAGGNFGDQIKSWPERVKTFYNDVRTETRKVTA
Ga0209168_101559371	3300027986	Surface Soil	MSVETKKMANSIAVGSFGERLKSWPEKVRSFYNEVRT
Ga0311341_105079103	3300029908	Bog	MGVETKKMANSIATTGGDFGDRLRSWPERIKSFYHDVRTEM
Ga0311343_104670584	3300029953	Bog	MGVETKKMANSIAAAGGNFGDQLKSWPERIKTFYNDVRT
Ga0311338_104035544	3300030007	Palsa	MGVETKKMSNSIAAHGDSFGDRLKSWPERIRNFYHD
Ga0311357_115754981	3300030524	Palsa	MGVETKKMANSIAAAGGNFGDQIKSWPERVRTFYNDVRTEM
Ga0210283_16577801	3300030588	Soil	MANSIVTASGSFADRLKSWPERARSFYNDVRSEMRK
Ga0311356_112131774	3300030617	Palsa	MGVETKKMANSIAAAGGNFGDQIKSWPERVRTFYND
Ga0311345_102065845	3300030688	Bog	MAVESKKMANSITTAGANFGDQIKSWPERIKTFYNDVR
Ga0265768_1171783	3300030963	Soil	MAVETKKMANLASAGGNFGEQMKAWPERIRTFYNDIRSEMRKVTS
Ga0310686_1089561161	3300031708	Soil	MGVETKKMANSIATAGGDFGDRLKSWPERAKSFYNDV
Ga0302319_106156423	3300031788	Bog	MGVETKKMANSIATTSGDFGNRLRSWPDRIKTFYGDVRTEM
Ga0310916_109379371	3300031942	Soil	MSVETKKMANSIAAAGDNFFDRVKSWPDKIKGFYNDVRTEMRKVTAP
Ga0316032_1064071	3300031956	Soil	MGVETKKMANSIASAGENFGDRLKSWPERIKSFYNDVRTEM
Ga0307470_113165231	3300032174	Hardwood Forest Soil	MANSLAAAGGNFGDQVKAWPERIRTFYNDVRNEMRKVTAPSF
Ga0335081_108130541	3300032892	Soil	MGVETKRMAKSIAAAAGDEGFGRLKSWPERVKTFYNDVRTEMR
Ga0335069_117787701	3300032893	Soil	MAIETKKMASTITAAGDNLGDKLKSWPLRVKTFYNDVRTETKK
Ga0335076_107415434	3300032955	Soil	MDEAGKRMGVETKKMADSIATAGENLGDRIKAWPER
Ga0326727_104508083	3300033405	Peat Soil	MSVQTKERSNSIMAAGGSFGDQIKSWPERIKTFYNDV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F100479

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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