Sample 3300031956

3300031956: Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1 metaT (Metagenome Metatranscriptome) (v2)

Overview

Basic Information
IMG/M Taxon OID	3300031956 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0211294 \| Ga0316032
Sample Name	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1 metaT (Metagenome Metatranscriptome) (v2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	17695226
Sequencing Scaffolds	78
Novel Protein Genes	81
Associated Families	73

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1
Not Available	58
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	forest biome → litter layer → plant litter
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Czech Republic: South Bohemian Region
Coordinates	Lat. (^o)	49.043	Long. (^o)	13.6183	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000218	Metagenome / Metatranscriptome	1552	Y
F001380	Metagenome / Metatranscriptome	709	Y
F001679	Metagenome / Metatranscriptome	653	Y
F001748	Metagenome / Metatranscriptome	642	Y
F001758	Metagenome / Metatranscriptome	640	Y
F002075	Metagenome / Metatranscriptome	596	Y
F002088	Metagenome / Metatranscriptome	595	Y
F003427	Metagenome / Metatranscriptome	487	Y
F003497	Metagenome / Metatranscriptome	483	Y
F003556	Metagenome / Metatranscriptome	479	Y
F003754	Metagenome / Metatranscriptome	470	Y
F004183	Metagenome / Metatranscriptome	449	Y
F005081	Metagenome / Metatranscriptome	412	Y
F007039	Metagenome / Metatranscriptome	359	Y
F007739	Metagenome / Metatranscriptome	345	Y
F009017	Metagenome / Metatranscriptome	324	Y
F009335	Metagenome / Metatranscriptome	319	Y
F009606	Metagenome / Metatranscriptome	315	Y
F010404	Metagenome / Metatranscriptome	304	Y
F011845	Metagenome / Metatranscriptome	286	Y
F014264	Metagenome / Metatranscriptome	264	Y
F014283	Metagenome / Metatranscriptome	264	Y
F015690	Metagenome / Metatranscriptome	252	Y
F016972	Metagenome / Metatranscriptome	243	Y
F018868	Metagenome / Metatranscriptome	232	Y
F018933	Metagenome / Metatranscriptome	232	N
F023505	Metagenome / Metatranscriptome	209	Y
F024377	Metagenome / Metatranscriptome	206	Y
F024939	Metagenome / Metatranscriptome	203	N
F025284	Metagenome / Metatranscriptome	202	Y
F025423	Metagenome / Metatranscriptome	201	Y
F027759	Metagenome / Metatranscriptome	193	Y
F030305	Metagenome / Metatranscriptome	185	N
F030619	Metagenome / Metatranscriptome	184	Y
F030627	Metagenome / Metatranscriptome	184	Y
F032496	Metagenome / Metatranscriptome	179	Y
F033915	Metagenome / Metatranscriptome	176	Y
F036818	Metagenome / Metatranscriptome	169	Y
F038036	Metagenome / Metatranscriptome	166	Y
F038498	Metagenome / Metatranscriptome	165	Y
F038685	Metagenome / Metatranscriptome	165	Y
F039221	Metagenome / Metatranscriptome	164	Y
F039620	Metagenome / Metatranscriptome	163	Y
F047359	Metagenome / Metatranscriptome	150	Y
F048323	Metagenome / Metatranscriptome	148	Y
F048440	Metagenome / Metatranscriptome	148	Y
F052605	Metagenome / Metatranscriptome	142	Y
F052737	Metagenome / Metatranscriptome	142	Y
F055026	Metagenome / Metatranscriptome	139	Y
F057733	Metagenome / Metatranscriptome	136	Y
F058585	Metagenome / Metatranscriptome	134	N
F060530	Metagenome / Metatranscriptome	132	Y
F061605	Metagenome / Metatranscriptome	131	N
F062325	Metagenome / Metatranscriptome	130	Y
F062326	Metagenome / Metatranscriptome	130	Y
F062378	Metagenome / Metatranscriptome	130	Y
F062493	Metagenome / Metatranscriptome	130	Y
F068474	Metagenome / Metatranscriptome	124	Y
F069601	Metagenome / Metatranscriptome	123	Y
F071174	Metagenome / Metatranscriptome	122	Y
F072940	Metagenome / Metatranscriptome	120	Y
F074242	Metagenome / Metatranscriptome	119	N
F079408	Metagenome / Metatranscriptome	115	N
F080741	Metatranscriptome	114	N
F082272	Metagenome / Metatranscriptome	113	Y
F085182	Metagenome / Metatranscriptome	111	Y
F089618	Metagenome / Metatranscriptome	108	N
F089697	Metagenome / Metatranscriptome	108	N
F089744	Metagenome / Metatranscriptome	108	Y
F095180	Metagenome / Metatranscriptome	105	Y
F097372	Metagenome / Metatranscriptome	104	N
F100479	Metagenome / Metatranscriptome	102	Y
F104228	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0316032_100163	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus → unclassified Narnavirus → Plasmopara viticola lesion associated narnavirus 22	2173	Open in IMG/M
Ga0316032_100793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1232	Open in IMG/M
Ga0316032_100950	Not Available	1156	Open in IMG/M
Ga0316032_101233	Not Available	1051	Open in IMG/M
Ga0316032_101695	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae	940	Open in IMG/M
Ga0316032_101747	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	930	Open in IMG/M
Ga0316032_101777	Not Available	925	Open in IMG/M
Ga0316032_101935	Not Available	899	Open in IMG/M
Ga0316032_101985	Not Available	891	Open in IMG/M
Ga0316032_102143	Not Available	866	Open in IMG/M
Ga0316032_102167	Not Available	861	Open in IMG/M
Ga0316032_102342	Not Available	840	Open in IMG/M
Ga0316032_102652	Not Available	809	Open in IMG/M
Ga0316032_102729	Not Available	804	Open in IMG/M
Ga0316032_102736	Not Available	803	Open in IMG/M
Ga0316032_103020	Not Available	779	Open in IMG/M
Ga0316032_103029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
Ga0316032_103043	Not Available	777	Open in IMG/M
Ga0316032_103067	Not Available	775	Open in IMG/M
Ga0316032_103073	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
Ga0316032_103229	Not Available	761	Open in IMG/M
Ga0316032_103328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
Ga0316032_103492	Not Available	739	Open in IMG/M
Ga0316032_103704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
Ga0316032_103864	Not Available	708	Open in IMG/M
Ga0316032_103924	Not Available	704	Open in IMG/M
Ga0316032_103968	Not Available	701	Open in IMG/M
Ga0316032_104283	Not Available	680	Open in IMG/M
Ga0316032_104364	Not Available	675	Open in IMG/M
Ga0316032_104627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
Ga0316032_104666	Not Available	656	Open in IMG/M
Ga0316032_104792	Not Available	649	Open in IMG/M
Ga0316032_104823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
Ga0316032_104859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
Ga0316032_104964	Not Available	640	Open in IMG/M
Ga0316032_105257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
Ga0316032_105375	Not Available	619	Open in IMG/M
Ga0316032_105403	Not Available	619	Open in IMG/M
Ga0316032_105696	Not Available	606	Open in IMG/M
Ga0316032_105818	Not Available	602	Open in IMG/M
Ga0316032_105987	Not Available	596	Open in IMG/M
Ga0316032_106127	Not Available	591	Open in IMG/M
Ga0316032_106190	Not Available	589	Open in IMG/M
Ga0316032_106251	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	587	Open in IMG/M
Ga0316032_106319	Not Available	585	Open in IMG/M
Ga0316032_106336	Not Available	584	Open in IMG/M
Ga0316032_106351	Not Available	584	Open in IMG/M
Ga0316032_106407	Not Available	582	Open in IMG/M
Ga0316032_106434	Not Available	581	Open in IMG/M
Ga0316032_106499	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis	579	Open in IMG/M
Ga0316032_106839	Not Available	569	Open in IMG/M
Ga0316032_106846	Not Available	569	Open in IMG/M
Ga0316032_107049	Not Available	564	Open in IMG/M
Ga0316032_107056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
Ga0316032_107083	Not Available	563	Open in IMG/M
Ga0316032_107152	Not Available	561	Open in IMG/M
Ga0316032_107386	Not Available	555	Open in IMG/M
Ga0316032_107388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	555	Open in IMG/M
Ga0316032_107397	Not Available	554	Open in IMG/M
Ga0316032_107567	Not Available	550	Open in IMG/M
Ga0316032_107739	Not Available	546	Open in IMG/M
Ga0316032_108035	Not Available	539	Open in IMG/M
Ga0316032_108039	Not Available	539	Open in IMG/M
Ga0316032_108318	Not Available	532	Open in IMG/M
Ga0316032_108336	Not Available	531	Open in IMG/M
Ga0316032_108420	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
Ga0316032_108495	Not Available	528	Open in IMG/M
Ga0316032_108549	Not Available	526	Open in IMG/M
Ga0316032_108660	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
Ga0316032_108783	Not Available	521	Open in IMG/M
Ga0316032_108808	Not Available	520	Open in IMG/M
Ga0316032_108815	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	520	Open in IMG/M
Ga0316032_108949	Not Available	518	Open in IMG/M
Ga0316032_108985	Not Available	517	Open in IMG/M
Ga0316032_109107	Not Available	515	Open in IMG/M
Ga0316032_109320	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	510	Open in IMG/M
Ga0316032_109411	Not Available	509	Open in IMG/M
Ga0316032_109562	Not Available	506	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0316032_100163	Ga0316032_1001631	F030619	MSPLQQVWTTCWSGLVLSGWDSMRVAWFLHSWVVKTLPSRGLAFTVKELKALCHNVRGSALHSKRWKNVPCNIRKDVVDTLCYLAVREPENGFAFTRLSRSLPEPPARECVRHLQDAKLIASASFPTSAATLDSLRSFVALTPGVSGNGVLRHPRRLPSSSSSCLEWPATRGGIDGYLEHLGHMCEESGATQASFHAYAGDSLGAFCLRKASTILRPCAGVSADLRESYRCAGLLYLRSQGKPFGMKAVALRAPGYKVRVVGVPDCLTFVEGSWTRSSLRWLAPGHWRIDGESREIPCGMHQKRGRRFASLDLSRATDGLSHAAVRVVVEGLAARGLIRPADLAMSLRSLGLERGATWSFPDLGDKIGEGSFLRGSPMGTPLSFVVLSWMNAWATSAFERSLTHGDDAVGRYRPVPHPLVSALDVYGSRVASVGASLNKSKTFLADHSWTACEILALPREYAEDGMTLFFPPSIPPPVLRAPVEADQRLENLWLRRMERVVKGRFPWIVKDPRLHLPVQVGGLGYTGRGLAVGVSVRQRLGALVSRGPSAVIAQDLIGKKPFREVGLFPRPLVRQVHASSYWKAVRATEQWFHGSGDTPVPLESLLSFKSCLIEDEIRLSEGDKFKRKRVAGRPDRTSRSAVFRRLGVAPCRPLSRRHGCSALIRWAKVSRESLVTVDQDIASEIR
Ga0316032_100793	Ga0316032_1007931	F039620	SALVAIWAVAAVAGGTWFPWWALIALPWIWVLIRRAQHRRE
Ga0316032_100950	Ga0316032_1009501	F074242	VLGGGGGRSALQPPPFVPTMGLSHKFRFTCGGQSGTFSITRGKLLNLVVLATSTTATVRLFEAVRLKNVEVWANPSALGSAPVTAAIEWLGENSPSTVISDTSMGVRPAHVSSVPPPSASNRWWCISGTSESDVMFSLTVPTESVIDVTLELRLVEQEAPTAGEAAVAATAGQVYGDYLDGIVTGLGSSSLAPVGYIVLP
Ga0316032_101233	Ga0316032_1012331	F074242	RNGTNRQGLRATRRRGRILVLGGGGRRSSLQPPAFIPTLSLSHKFRYENGGNSGTFNITRGNLLNQILIATSTTTTVRIIEAIRLKSVEVWGSPPALGSAPTDIQVEWLGENSPSTVVSDTSMGIRPSHVATSPPPSSSNKWWSISGTSESDVLFSITLPTESVIDVNCELRLVEKEAPIAGDAAVAATLGQVYGDYLDGIASGKLVPSGFTVLP
Ga0316032_101695	Ga0316032_1016951	F072940	VIGELPDHIFTGLDTKARVTVTGSACYEATRSEGGTAQAILDIMSKYDDDILVPIRDLDTGNITSWVHKEKASSIGTAVFWACLHEVLTTNLEELRRVSLTLVREPGKARVVTKGHAAVKIVLDTVSKICSYPLKKGFKSSASGMGKSHHGWNLFKDFTSEEMYDLLFSEDRKFREDDQFAEHISRVQVWEDVYLSSTDYQEATDRMVHKFGSIVATKWMTKCGIPPILRGIILAVCFRPREVHFTATGALREVGRLVDGDTRSVVLYRGVLMGDPLTKVILHFANILARRIGQGLTTGSIYRHFNNGLECQE
Ga0316032_101747	Ga0316032_1017471	F015690	VISSRKVPHDWFRNRGAEESVTDIDTFVKSGGHQKYRLFLSTHGLYYMTLDQVASWMNGNMEAEFHCIVHRHDKSKGHLNKGELEYTTDSDGYVRQSNPLTGFTYSHRSIEPLFHTDSCRVLGGKQGITWDINKLAGDAYHIKFVLCGADVANDIVDPWMLIQKDREVYVRGDVTVYRVLGYEWYVYHGSNGQTLLEDVELYDRLRRTIAGKERTPRAKSELMAMCRRLANKLDIISVHQGFSHDVPPELMSDYVNAAFYADVKHELEVALAHHRENKGAIDALNRYYAEGIAPPDYTNIVKVGRAVATP
Ga0316032_101777	Ga0316032_1017771	F025284	MDVNKNFPRRRKGGARRTQGQNMRRGVRDQISHSPELPSYGITRDVRLRFSCLAGTGQAITFQNLLDTILVATSGTTAADLFEGVRVNSVEAWGIAAIGTPSTVTVIYDGTTVGAMGDQKTHTDSSMGVQPAHVKARPDPLTQAGQFQPSSANTAFRLDVPTGAIIDVSLSLRQPVLGQAVASQNVLVGATTGAVYYRGLDGKTTALTNFPVLGADSVI
Ga0316032_101935	Ga0316032_1019351	F009606	MSKEQVSKNNDNGRGPNVVRTKAKPKVNPVTGANFEYVSEPRIGDSFVVVMGGPGGVNSFTFHHPIGVTEVDDEDWVCTPTGDIPSLLARRDDPDEADRKARRDKHRLDLVVIANLLEKADDEGLLVYPGTDISRQDALAAARAAAKDAVKAEKGKVPPDLYIRFLPQPVQEAETLVRKKLASRETIQKAETKFPPSGFRTRGGPLADRDQVSVDYLSGLSRPQALDAVTKRVFGLDDEE
Ga0316032_101985	Ga0316032_1019851	F030305	MPLQFIGSCIVPFGFLVPVPSFLFPALSDLARRCSSGRPVPRVSDRTGDEASSCPDSSVFSAVPADGSSSRPDSRILQLGYPQIARLPRLSTSCLAVDERPGCPDRSIIWLYRRRRSRVAPNLTSFGGTVSNSPSRPGSSLLQPLPLMVLRVAPGAPSSGFAGGDSSGCPEALIPRLCRLVALRVSPNLPPSDICRFRSSGLPQIGFLGGSMMNPRFARTLHPRSIQLTFLQVAPKLPLPAAPRMNLQTHSGFAFLPTLRCSLNLYPLFACRRTGLLRTTINQFPIACRAGLQSVS
Ga0316032_102143	Ga0316032_1021431	F089618	EFPEIENARDRSPWRLNLDGLVVQPVLRPSATPAANLQLSLPLLPLAAPVSNLRLASAALPPARPRANPPARIGVFSPGSTGGKHPARTVCYALPIDWLLTFQLALASGLQLGLRLLPTHIWCRPSARQVLRLPVLTGFRRNHRLAPVAAAAPTRAGCCPLLPHRPRTSDSHRLLFRRLCRSQLTQLALCAPTSGWAFDAPLASTEPCIAS
Ga0316032_102167	Ga0316032_1021672	F058585	LDHSQYSRCCVLRLPQWPPSSFRWRCYHWLRWLSELRLASGPCTPARPVANLPARIGFVSFGSTGCKPPTCVDCSALPLVLRRSIWLAPDDPGLIGLAPDNPGSTRLAPHGPFLRLGRQPTSDSHRCRPLARLAASSGLRLMLPLPLGWLRFQFALAASPSALTVREPLGLRLVAPSPAEPVMHSLFQLNLASPAKPSMSILYPLALASSGIFQLNNFRLGSAFALLVRPAIPLRLAPQVSPSVRVYGHRSGSHRLFAP
Ga0316032_102342	Ga0316032_1023421	F024939	RVAGPRTLRCAPVADYSSLDTWLSPLPADCSAFRFVHPMLPTDLTRRSTLDARRRSRIAPLPAICVRVAHRIAPCSTLRALHRSRIAPLSMLVRRASCELLRSPRFAPCRLSRISPPGLLRSDCSSFGDLMLRDGLRIAPYADTSHPCVDHGSLRVQHFKLRPVHRLLCARRLAFDSDRGLLRCLHLAPWCCPRIAPCATLGVLRLTRLAPHSTLIAPHQIWITPYPTLDTLLRLRIAPHSSLSAPC
Ga0316032_102652	Ga0316032_1026521	F038685	RTVAARRPEKPFESTTEIIPGDRGKDGGSWCPDSPQHSNVPQAISPAPLVGVMTDQLHELRS
Ga0316032_102701	Ga0316032_1027013	F000218	MRLVDAITGLGGLLVPIVAILVGGAIAITAMVIRHQERIAKIERGMDPDAGVP
Ga0316032_102729	Ga0316032_1027291	F080741	DESVVQPVLRPSATPEANLQLSLAIASSGCAGVESPTCVGESTSGSTVGQPSGSDRCFVLRLDRWHALGFRRVLCASVRPGADLPTCVGVHPPARPATNCRLTSGVHPSARLVSNLRFSPAVVTAFSLRLLLLRLSSLRWLSPVCHTGCELPTRIGCYGLRLYRFRPTRLASNVSTSGWAFDAPLASTDPCIAGKPSMSIQHPLVLAPSGSASLTTSDLRRLLQSLARPAIPLRLSPQVSPSGWAGGDCSTLIGFSFHPPFRRSTPD
Ga0316032_102736	Ga0316032_1027363	F023505	WNDSNGRKKVEEVPRIIPGDRGKIEPGWLDQSLNDRFARDGNRRHNSPVPLIAFARDQ
Ga0316032_103020	Ga0316032_1030201	F057733	VGTTIVRTACFSITLTVALIGFAGLATAQDYSGPPKRTILDYGPPTGKFKSTTVDTVVTPSSGKCGNPAGNCLFYGGDFLYDPLYPSISNALANESTLEVPGTPYGAATWVPFTVPAGEMWAVTGLFTNNLASYGVLDQGAEPLSVAYWSINEGMFPGNAGTVIDSGTAAATSTPTGRGAFDDTEYTVQVTGLSVVLSPGSYWMSVVP
Ga0316032_103029	Ga0316032_1030291	F001748	LNLDSFRTLSVEPDRVNAMKKKIASRAILAVVLLMTTFAVAAPKAAKPNASQDVPAFPGTLVNARYVYVTSYDGDQFNPNLLSDDRQAIGTVQDAMEKWGKFIVVYQPQQADIVLMVMSRPSEDILAVYDAHGWPGKSQYLWRMMGRSGLQPTEAPLVTNLEKAFEQATAGK
Ga0316032_103043	Ga0316032_1030431	F018933	RSRITPRSTLDSLYRPRIAPRSVLIDRCCPPIARRSTLNAPRRSQIAPRSTLCARAGHGLLRVQHLESSPRVQIAPYSTLCVPRRSQIAPRSTLPAPYRLRIAPLSAIDAPCRSTDISVRLHFAPCAVHGLLRAQHFKLRTAHRLLCVRRLHFVPIVDCSAFLTPCLVSLADCSVLNT
Ga0316032_103067	Ga0316032_1030671	F052605	RFKIIPGDWGKAGSGWLTWLLLTTGPQGLAAEAEFTSSSGGVRTPSNANEGLGSEKRLEAASS
Ga0316032_103073	Ga0316032_1030731	F024377	RLLEMAQSGQIRSCIFGENWSKSDDAAWKLLQSQPALKNDSDLGRRNRGITIALL
Ga0316032_103229	Ga0316032_1032291	F007739	TKRAAKSKIDVERFKIIPGDWGKVRSGWLTRLLLNRAARHGSGGRIHQFLWRCSRTVKMRMRDLAARGD
Ga0316032_103328	Ga0316032_1033281	F003754	AAKQGFMVVDVSKPELPSLLKRTAESNQATAGNLQVVSPDVAIAEAPEKTPTTLTSSTHPTETVRVLDLSDPSNPKTLETFNKVTSLLPDGGHGLIYLTNNDGLWILRYNHPSRFEPAKKKPPCDSETEIQAMPPDCQ
Ga0316032_103328	Ga0316032_1033282	F014283	PDAKDSKGQITLQGCVSRSSGDYILMKQDPAMTYELQATGKTKLRHYLGQRVEVTGKESPSMSTSSDAMAKMGSASPVTLTITSIRTIAKDCSVRDVSR
Ga0316032_103492	Ga0316032_1034922	F009335	MVKTRIRSHKRVFTWFASRRPQTPAEASLEASLKIQRPQGAGRPCYEADNSACRGEW
Ga0316032_103704	Ga0316032_1037041	F036818	KRILLNSLAGAGLLVFSLNASAQDRPRDDDSYHSDRDARFHDEHWRGHLFEDVRQDVEHVRATTWPSGGDNYRLDNTIAALNQLQGKLADRVYDERDLNDVIGVLTRVVSDNRMRPRDRDILSDDLTRLRDYRDHHADWER
Ga0316032_103864	Ga0316032_1038641	F009606	SESRIGESFVVVMAGPGGVQSFTFHHPIGVTDVDSEDWVCTPTGDIPSLLARRDDPDEADRKVKRDKHRLDLTVKAGLLEKADDDGQLVYPGTDINRQDALAAARSAAKEAVKAEKGKPSPDLYIRFLDNEVQAAESSIRKFLADGKTIQAAETKFPASGYRTRGGPLADRDQEEIEYLSGKTRSQAQDAVVKRIFGQEDTEE
Ga0316032_103924	Ga0316032_1039241	F062378	MAASKPISWPNRRNTTLFSLNNNLGTLLTLVLGCFPLDIQPYRT
Ga0316032_103968	Ga0316032_1039681	F018868	MRSRTSHAAKSGVGEHKARESESAQHCADGKECVASTHPHLLK
Ga0316032_104283	Ga0316032_1042832	F097372	MSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPTISATTQASSEEDGFRARRLELARELKQKQIRLTAAAPGDRSQINLEIGKLLSERAKLDKLIKQFDAATIL
Ga0316032_104364	Ga0316032_1043641	F016972	VRLTPLTDEILVVNLYLTINDTDRVSFRAKTSRYGPHELGYRRATITFTK
Ga0316032_104627	Ga0316032_1046272	F033915	MSVNGTAAYGMYPRTVALPEVVHALNRAGFENQDICMVLSPAHPVATVVRDAKIVDSDRAESATSARMIGWFSEFGAVVIPTVGFFIRSQAFFHALVTEQNFPSMS
Ga0316032_104666	Ga0316032_1046661	F009606	DNKVKSDGKGQGPNVIRTKAKPKVNPVTGANFEYAHEPRIGDSFVVVVAGTGGVQSLTFHHPIGVTDVDSEDWVCTPTGDIPSLLARKDDPDELDRKAKRDKHRLDLAVSKGLLQKTDVDNQLVYPDTEINRQDALAVARAAAKEAVKAEKAKLSPDLYIRFLDVTIQEKESEIRKFLADKRTIQVAETKFPGTGYRTRGGPLADRDQEEAGYLSGLS
Ga0316032_104792	Ga0316032_1047922	F047359	MLSRSIHTYAAPSDPLAGTVRFHCSAAYTPCLRCALPPRRPTTGSVLSLRILSQHVALCDSGESGGCVHPVPSPPTLAFVPLVQTRHSHPSRKSVSRGGHLSELHYGSLALQPADLFTLLTDRTGFTPSPRGFLLPGFRRVGHPPRRRLLLRWQLGNFHRRDLHPQEWQ
Ga0316032_104823	Ga0316032_1048231	F001748	MKMNAMNMKTKTRKISVSASAVLAVLLLATTLALAAPKANTSQNVPAFPGTLVNARYVYVTSYDGDQFDPNLLPEDRHAIATVQDAMQKWGKFILVYEPRQADIVLMVTSRASEDVLAVYDAHGWPQNQYLWRMMGRSGLQPSEAPLVTNLEKAFDQATAK
Ga0316032_104859	Ga0316032_1048591	F055026	YEAECQKPLKEREANQRAATISERHSLVKLSAERRLGGPSRSYHGEGNRQQSARPDGMLYLSGVSVGGTLGKNSAEQERPYLAVGSDEDRGYKAGRLKAHGAGRESEGCVVPMKACSKTRWREGTLLWSRRRRGKREGMPVMANNPFDKARQLDSPAMGVSQVSSKRAGIGEGGDNRHDNPVKGRGAYRVGHHARHIEKTIGKPCAGKPHARFE
Ga0316032_104964	Ga0316032_1049641	F089697	STVGAASSGYPSGRPPAFAGAATIGCAGFQNSDLRRRPALQLDRWPTFRLGSASCPSARPAANLRLASNVPLFRSSFGDPSGLRLTILVSPGLRPTILVPSGLRRMALPPARPTTYLRFASMPSFDSAGGFIRLAPYAAPAPRLAPLPVCTGCFTLRLDRP
Ga0316032_105257	Ga0316032_1052571	F036818	GAGLLIFSLTTTAAAQDRDRDPEAYHSDRDAYFHDQQWRGHLFERVKDDVEHVRSVTWPEGGDDFRLDRTLTQLDELQGKLANHVYDERELEAVIDTLGRVASFNRMAPRDRDMLNDDISRLREYHDRHADWDR
Ga0316032_105375	Ga0316032_1053751	F025423	FVGLFPSLLYHHVFPISSLAHHGHASVLSTAFRSAVRLARLLPGNRFGDYRFNAFRRAAAYHSETGPFARNGLFLARNDFRFRGLHSGVKGPGLLLRCLDHRLPCPFGLSAPLPELVCPNSRRFHASGPLHFHQRTHPAALSISTPLQEFSLLRDQSVQWASLPSGPPSEFARFPLAPRSRSIARLRLRIIVRDSLRFRRLAVPQ
Ga0316032_105403	Ga0316032_1054031	F002075	ALCEEALMTNQTPPQPVLQNWRELYSAALFETDESRILARIADAKGAIVVRARELFSVGADTVEEDQALDDALYALRALQSCLKFRAAA
Ga0316032_105696	Ga0316032_1056961	F009017	FFPKRVVPSDPIPSLAHRGHASALSSAFRNAERLACLLPDYRFAGHRFNAFRRAAACLPKLNRSPVTAFPSPATAFAFANSIPRSMVPACYFAVSSTGWNTRSAIQLRRRNWLAPIPATSSLQARCILASQLMRLLSPSPLPSRSFCSFGINAFNGRRRRPVHLPNPPDFHSLPAILSIARKGCGSSSVVRYVSGGLLFLK
Ga0316032_105818	Ga0316032_1058182	F038036	MKVKELKQALRMISNVLADPRCKPGYGDQLRRVKRELEAVMRSGRLDQGRLFRAVEIVATVLKEIVGDDAGQR
Ga0316032_105987	Ga0316032_1059871	F005081	MADCTILTITCDQQFLTLLRKELHDQVGGGNPMIVASTIDEACSLLPMAHPRLIVVHWNRQGGRSEELNRLLWATTVLARGVPVLVIADRYRVDQATTFYRMGVTEYISRTHHENQFGRIIDTYLRHRPAASP
Ga0316032_106127	Ga0316032_1061271	F014264	RTASLAGSSGSGTMIRRANVIRDYFGRGGERGKIGRLVRVSFSIWKRAEHYNPEGSRGPDGE
Ga0316032_106190	Ga0316032_1061901	F048323	YFDSLKGITESESGKSSEALKITGKPELHKNEKSRDMKKRVN
Ga0316032_106251	Ga0316032_1062512	F048440	RGRATGRAEASGQRSAFGRAATLQAVTRVKLEQAPKVKSWMPTRPLTGEGRADREETDKHLFGPPG
Ga0316032_106319	Ga0316032_1063191	F011845	PGFTARSSDPSACGRSLRGMMLRINRSPLAIAAFQPAKGHSNKRVLIGLQHPAGTGISIRPFARSQRRFRHHCEVDVPDLYLRFPIENFRESVRFLAPSLRSVSRLNRGDINALNPFPALISDAPDLSPVSTPLEVFFRRPSGSKRSTGSISGNPPYPTLDCSVRPAASSFDSATDCSGVTQVETRLVRLDYRS
Ga0316032_106336	Ga0316032_1063361	F061605	MHGTELCSQIRRAFFLSAPRFLLSKAADRCFQARLRASLTGADISKRPFALPKRLPVSEPPFRGQRSRPTPSMPCRSLARPVRLSAPPRAPVRPGTREITAKNPLPDSRSALPTVSRISTPLQGLSNPSGSKRSIRFPIWKLTFRIAPDCPSLPGFGSILLVPLPDHRSRLAKRPVACCS
Ga0316032_106351	Ga0316032_1063512	F068474	MIFFRVSTISTGSAAAFDSAFAQCHGSRLFTLRLLFHHSPAVSFLTSPMLGSFSRGLPSLRDLPGADALFVPAFAVFLLPVSTFYL
Ga0316032_106407	Ga0316032_1064071	F100479	MGVETKKMANSIASAGENFGDRLKSWPERIKSFYNDVRTEM
Ga0316032_106434	Ga0316032_1064341	F062325	VPSDPISSLAHHGHATVLSIALQIAVRPACLLPGNRFGGYRFKAFRPAAAYYLKLNRSLVTAFPSPATASAFTDSIPGSKVPACYFAVSLTG
Ga0316032_106499	Ga0316032_1064991	F001679	GVWGMPWRQEAMKGVEDCDKPGGLVKRELIPGSLNYHGVNPIAP
Ga0316032_106839	Ga0316032_1068391	F003497	VPSDPSNSPLPDRHARSKHGSQRIGDVALLLPVTAFIRLRISAPEPIRHFYLLEAFVSGRPFARPQRLFSFENHRGEVKAPDLSLRQNSELFLQPVRPSAPTLGGVHHASGDVRRRKPVAVSRAQNSQTSIQPSLPFRTFVPPDRSAQSAAWSEKLTLVPGPFFLRSPKASITF
Ga0316032_106846	Ga0316032_1068461	F062493	VCRKASIPGQRNRPRGSGTAKHPELLNAVFYAEHAGREQGWELN
Ga0316032_107049	Ga0316032_1070491	F048323	YFDSLTGITKNESGKSSEELKIMGKPELHKNENSQG
Ga0316032_107056	Ga0316032_1070562	F002088	MMSDFQLNRGDICGDPTGLRVKVEDVDIYNYVHFSVIEINEEGEGEAGSGEMSHVAFAHR
Ga0316032_107083	Ga0316032_1070831	F001380	TVRFSDPSACGRSLCNRMLRINSSSLTAAAFRPATGHSNQRIFVGLSILPEPESRYGLSLANNDAFATIARSMFLACIFVSTSKTFASPFDSWLFRSVRFRGRTGAMSTPGTRFPLQSSILRNHPQSPLPFGPSFENPSDQSVRPVPNPEARLTRRPIVPYSPPHPLAIPLRISARNSLRLSLTYRS
Ga0316032_107152	Ga0316032_1071521	F038498	MRRVNAATCEKLKSLRRNRRLETAFHSLTTTFARHCEVKVPDLLLRLRAENLTEPVRSRTPSLHSVFEAELGRILRPLPVVPRRSPALLRFHSISTPLEAYLQSPPDQSVRPSSSRGSLPDEISACPLLPSALSFRMSPRITAFDALYPARLIV
Ga0316032_107386	Ga0316032_1073862	F039221	YMSTLTSLLDERASRMAEQLDDLGRETAQSLHAAASSIRKGSKAIEDVAESTANKLDGAGSYVEKHNVKWRIAESRQLVRRYPRESLVFAGGVGFLTGFAIRRLTHTCDKSGPDRNA
Ga0316032_107388	Ga0316032_1073881	F095180	RIQEHILLRLDFLDYITTFPRQQILPAPHNTARGIFEQFTPLFGVSYSF
Ga0316032_107397	Ga0316032_1073971	F071174	IMFDSIEDQMKNVAMEGTPKEKWTKYIIISAISVVVVGGIFAAVQFIK
Ga0316032_107567	Ga0316032_1075671	F003427	MAKTRIRNHKRVFTWFASRRPQSPAEASLEASLEIQRPQGAGRPCYEAETTPLAVENGVGKLAANVRRMPAWER
Ga0316032_107739	Ga0316032_1077391	F052737	TMPAEKCKQCGEIMTEQPTAYEAVNLPGVPKHSDRFYEQWFVCSNGHRMGYISGHGRAPGVARVVSETSVVCVRT
Ga0316032_107919	Ga0316032_1079191	F104228	TSVIILLLKRRSYGHSDPYDYWYANTLSYGGPSNFIKQLLTILNHAEYDSGATVMGIASR
Ga0316032_108035	Ga0316032_1080351	F030627	AVSDRFCGDLLPARARLGPLSVRHFLRIASGRRFCCGSFRRSNHPTGWHGGFPTGRPWDFAAERRKIAPTDEDRRSLPALPFPGPAPRIGLASSAVTGSIDLPWVQCTGVEGLSPRDPGTSLAATLTPIAHPAFWRRLVRGGLVAGRRLPPCPRLIASHGLL
Ga0316032_108039	Ga0316032_1080391	F001758	KSGQAGWQGSSKIKPQGEMAEAEFTSSSGSVRALSVHAKKELSREERLETVPSRVK
Ga0316032_108318	Ga0316032_1083181	F062326	HGTIERTTGMLGVRSATGRSGFVVFRSPATPFGTRRVSAKNASSRLASRRSRKLGTAFRSPVTMLSPPLRGQRSRPAPSLPRRCFFAYPLDQKLLRSVRFRSRNRANSSPSTRCPRRSPALLRCHPVSTPLRAFPPSGSKRSTGFIATSSPRLTPDMSFAPRGAIFRFRPGSTLETR
Ga0316032_108336	Ga0316032_1083361	F079408	MPVRPFGSASGISLPQLPKFPRLRPVAFTTGELIRLPSPSPLPFRNFRSLGIKAFNGRSRRPVRLPNSPDIRSLPVAFLFLVYG
Ga0316032_108420	Ga0316032_1084201	F085182	AGAMIAGALRFALHGRATAPKAHIEGHAAEESPDSKGRDGG
Ga0316032_108495	Ga0316032_1084951	F089744	KIGLNSIIWRLYALLKAYGCRIISDSYRHGDTSNYCQQTIIYPRIEYDTGVELEG
Ga0316032_108549	Ga0316032_1085491	F010404	MQPFTLLQRRFALQQIPAAGSTLLAYTFKAALEFQLARSASRSRPRLAFFRLAGLDHCESPVANFLS
Ga0316032_108660	Ga0316032_1086601	F007039	LIDAAASVAVLGLWYVVFSTYNRKKGATALRWVQTACAGKGRILDSRWQGSSRLQARLYFPSGWFENARVIVKFRPRALPVQWLVSCWRRQNETLTFEADLGGSPSFHLEVVRHRWCAHNRGTSSRKRDNREWDVYEPGPIILTTRTHWKQDPTAELNALMSARRQDILRVQFR
Ga0316032_108783	Ga0316032_1087831	F082272	SLDAPEVTSEGASPRLFNWKIPEDARASGYRILIDGFAGDARFS
Ga0316032_108808	Ga0316032_1088081	F032496	FSLSIALAAASLLAHAQTFNEVQVNLPYAITAGNAVVPAGNYEIRPLANQPDTFGFYKDGIVCKSIVHATPIQAGADVDTSIVLRGGGDHLRLSQLWIDGMTGYQFTMPSAAKSREREGTPPLVIKARSN
Ga0316032_108815	Ga0316032_1088151	F003556	AKLPVRSNFNKAVSDDDYMAGKLLSAAYEHRHIASIRGLLLSTAEQLSPTPFLDMRNQAMAYKYTAEELRNMTINANVIDPDVLGSFLYNVYNVWEPDLIDCYASVCDGILGFQRVNRKSGKQNVLLAPRIPRALWDTSFESLIAIDVSL
Ga0316032_108949	Ga0316032_1089491	F004183	RLWGANEDRAIPEGGPNGCEACRRVDPEGAKIPEGELRQAAQPAEQAGRECNGLEAWMQPDAGANQQLAAEPKSRTSRKTGKQVSEVAGQEL
Ga0316032_108985	Ga0316032_1089851	F032496	VFSLSIALAAASLLAHAQTFNEVQVNLPYAITAGSVVVPAGNYEIRPLANQPDTFGFYKDGIFCKSIVHATPIKAGADVDTSIVLRGGGDHLRLSQLWIDGATGYQFAPPSAAKTSGREETPPLVIKARRS
Ga0316032_109107	Ga0316032_1091072	F069601	LTRDLTAFGVLEGDAEAYVQGVRRGGVMVFATGLGKKADTATEIMNRHGAVELEEINALRPELPTSDQGEATPVHVSSVQIGRVRSPGSGARMFVW
Ga0316032_109320	Ga0316032_1093201	F060530	VRDSSAVTLFMQMTREGKQGSIAKRWARRTRRKVEGRIEFRGVG
Ga0316032_109411	Ga0316032_1094111	F027759	EAVAESQIEAARFTDNPGRPGKSRIRLVDLAPQNRGASRGEAKFTSSSDDARTSSKCE
Ga0316032_109562	Ga0316032_1095621	F048323	SLTGITESESGKSSEALKIMGRPELHKNENSKDLKKRVN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031956: Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1 metaT (Metagenome Metatranscriptome) (v2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences