Metagenome / Metatranscriptome Family F102130

Basic Information
Family ID	F102130
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	79 residues
Representative Sequence	LCLIDMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Number of Associated Samples	25
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	1.96 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	19
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (99.020 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Hypoxic/Sulfidic Aquatic (64.706 % of family members)
Environment Ontology (ENVO)	Unclassified (64.706 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (76.471 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.37% β-sheet: 18.42% Coil/Unstructured: 59.21%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00534	Glycos_transf_1	5.88
PF13620	CarboxypepD_reg	3.92
PF08241	Methyltransf_11	0.98
PF00343	Phosphorylase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
All Organisms	root	All Organisms	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
cellular organisms	root	All Organisms → cellular organisms	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Acidilobales	order	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Acidilobales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Acidilobaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Acidilobales → Acidilobaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Acidilobus	genus	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Acidilobales → Acidilobaceae → Acidilobus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
unclassified Acidilobus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Acidilobales → Acidilobaceae → Acidilobus → unclassified Acidilobus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.02 %
Acidilobus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Acidilobales → Acidilobaceae → Acidilobus → unclassified Acidilobus → Acidilobus sp.	0.98 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003614\|JGI20129J51890_10026093	Not Available	2326	Open in IMG/M
3300026882\|Ga0208313_102124	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Acidilobales → Acidilobaceae → Acidilobus → unclassified Acidilobus → Acidilobus sp.	3571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	65.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	29.41%
Freshwater	Environmental → Aquatic → Freshwater	4.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified	64.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	27.45%
Lotic	Environmental → Aquatic → Freshwater → Lotic	4.90%
Unclassified	Environmental → Aquatic → Thermal Springs → Unclassified	0.98%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.98%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified	64.71%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	18.63%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	6.86%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	4.90%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.96%
Unclassified	Environmental → Aquatic → Thermal Springs → Unclassified → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.98%
Microbial Mats	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats	0.98%

Habitat	Taxonomy	Distribution
Hypoxic/Sulfidic Aquatic	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Hypoxic/Sulfidic Aquatic	64.71%
Hot Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring	17.65%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	4.90%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Hot Spring Sediment	4.90%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	1.96%
Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Microbial Mat	0.98%
Hypersaline Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hypersaline Mat	0.98%
Hotspring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Hotspring	0.98%
Hot Spring Water	Environmental → Aquatic → Thermal Springs → Unclassified → Unclassified → Hot Spring Water	0.98%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.98%
Hot Spring	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Microbial Mats → Hot Spring	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2022920002	Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP3 Monarch Geyser, Norris Geyser Basin	Environmental	Open in IMG/M
3300000348	Acidic sulfate chloride spring microbial streamer communities from Grendel Spring, Yellowstone National Park, USA - T=76-80	Environmental	Open in IMG/M
3300001382	Hot spring sediment microbial communities from Joseph's Coat, Yellowstone National Park, USA - JC3_ASED	Environmental	Open in IMG/M
3300003614	Hypoxic/sulfidic aquatic microbial communities from Monarch Geyser, Yellowstone National Park, USA - MG	Environmental	Open in IMG/M
3300005223	Sylvan Springs Unknown 12.1A - Microbial communities from the Yellowstone National Park, bulk metagenomes as controls for mini-metagenomic methods	Environmental	Open in IMG/M
3300005959	Hypoxic/sulfidic aquatic microbial communities from Monarch Geyser, Yellowstone National Park, USA - MG (SPADES assembly)	Environmental	Open in IMG/M
3300006855	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - ECH_C host_MetaG	Environmental	Open in IMG/M
3300007812	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_host_6_15	Environmental	Open in IMG/M
3300007814	Extremophilic microbial mat communities from Yellowstone National Park, USA - OSPB_Slides-mat_host_7_15	Environmental	Open in IMG/M
3300007816	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_virus_9_15	Environmental	Open in IMG/M
3300013009	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_host_9_15 (v2)	Environmental	Open in IMG/M
3300025360	Hot spring sediment microbial communities from Joseph's Coat, Yellowstone National Park, USA - JC3_ASED (SPAdes)	Environmental	Open in IMG/M
3300025371	Hypoxic/sulfidic aquatic microbial communities from Monarch Geyser, Yellowstone National Park, USA - MG (SPAdes)	Environmental	Open in IMG/M
3300025462	Hot spring microbial communities from Joseph's Coat, Yellowstone National Park, USA - JC2_E (SPAdes)	Environmental	Open in IMG/M
3300025503	Ferric oxide microbial mat and aquatic microbial communities from Rainbow Spring, Yellowstone National Park, USA - RS3B (SPAdes)	Environmental	Open in IMG/M
3300026813	Extremophilic microbial mat communities from Yellowstone National Park, USA - OSPB_Mat_virus_9_15 (SPAdes)	Environmental	Open in IMG/M
3300026877	Extremophilic microbial mat communities from Yellowstone National Park, USA - OSPB_Mat_host_9_15 (SPAdes)	Environmental	Open in IMG/M
3300026882	Extremophilic microbial mat communities from Yellowstone National Park, USA - OSPB_Slides-mat_host_7_15 (SPAdes)	Environmental	Open in IMG/M
3300026906	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_host_9_15 (SPAdes)	Environmental	Open in IMG/M
3300027931	Extremophilic microbial mat communities from Yellowstone National Park, USA - BED_Mat_virus_9_15 (SPAdes)	Environmental	Open in IMG/M
3300027932	Hot spring microbial mat communities from Yellowstone National Park, Wyoming, USA - BED_virus_MetaG (SPAdes)	Environmental	Open in IMG/M
3300029569	Moderately acidic thermal spring sediment microbial community from Yellowstone National Park, USA - MV2 Spring	Environmental	Open in IMG/M
3300031749	Extremophilic microbial mat communities from Washburn Hot Springs, YNP, Wyoming, USA - WHS_1_MG	Environmental	Open in IMG/M
3300033159	Hot spring sediment microbial communities from Geyser Creek Basin, Yellowstone National Park, WY, United States - GCR.JH_S	Environmental	Open in IMG/M
3300033781	Hot spring water microbial communities from Geyser Creek Basin, Yellowstone National Park, WY, United States - GCR.JH_P	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
YNPsite03_CeleraDRAFT_129710	2022920002	Hot Spring	MHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
YNPsite03_CeleraDRAFT_235600	2022920002	Hot Spring	LYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
YNPsite03_CeleraDRAFT_37430	2022920002	Hot Spring	RTYQKGWRLIPIEGGGLGLCLIDMHVFDVLDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
GreS_7680CDRAFT_10053793	3300000348	Freshwater	YFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLSLTASHYLAPPVALRFDGTLYNTP*
GreS_7680CDRAFT_10113442	3300000348	Freshwater	MLSKSLTLSGSFTHGTMAIFDVIEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLSLTASHYLAPPVALRFDGTLYNTP*
GreS_7680CDRAFT_10125721	3300000348	Freshwater	IPIDGGGLGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDKGIQPYADLEVTASHYLAPPVALKIDGTLYNTP*
GreS_7680CDRAFT_10127152	3300000348	Freshwater	FDVIDEPYFKWELAPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
GreS_7680CDRAFT_10174791	3300000348	Freshwater	LTPGDIPPGSRLIPIDGGGLGLCLIDMRVFNVIEEPYFKWELYPWNPPPGGLSEDLYFFKKVIDKGIQPYADLEVTASHYLAPPVALKIDGTLYNTP*
JGI20127J14776_10161653	3300001382	Hot Spring Sediment	RLIPIEGGGLGLCLIDMHVFDLLDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20127J14776_10286022	3300001382	Hot Spring Sediment	LREGGLGLCLIDMHVFDVLDEPYFRWELYPWNPPPGGLSEDLYFFKKLIDRGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_100260931	3300003614	Hypoxic/Sulfidic Aquatic	LCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_100402611	3300003614	Hypoxic/Sulfidic Aquatic	DMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_100954713	3300003614	Hypoxic/Sulfidic Aquatic	VIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_101374151	3300003614	Hypoxic/Sulfidic Aquatic	IDMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_101489003	3300003614	Hypoxic/Sulfidic Aquatic	LIPIEGGGLGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_101518133	3300003614	Hypoxic/Sulfidic Aquatic	GGLGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_101541462	3300003614	Hypoxic/Sulfidic Aquatic	MHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_101550411	3300003614	Hypoxic/Sulfidic Aquatic	IDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_101646601	3300003614	Hypoxic/Sulfidic Aquatic	KGWRLIPIEGGGLGLCLIDMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_101900491	3300003614	Hypoxic/Sulfidic Aquatic	WRLIPIXGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_102034752	3300003614	Hypoxic/Sulfidic Aquatic	LTPDDIPKGWRLIPIDGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_102282053	3300003614	Hypoxic/Sulfidic Aquatic	LIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_102356421	3300003614	Hypoxic/Sulfidic Aquatic	PKGWRLIPIEGGGLGLCLIDMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_102601113	3300003614	Hypoxic/Sulfidic Aquatic	GWRLIPIDGGGLGLCLIDMHVFDILDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_102992323	3300003614	Hypoxic/Sulfidic Aquatic	GWRLIPIEGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103321961	3300003614	Hypoxic/Sulfidic Aquatic	CLIDMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103427913	3300003614	Hypoxic/Sulfidic Aquatic	IDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103489963	3300003614	Hypoxic/Sulfidic Aquatic	LTSIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103584321	3300003614	Hypoxic/Sulfidic Aquatic	WRLIPIEGGGLGLCLIDMHVFDIIDEPYFKWELAPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103680341	3300003614	Hypoxic/Sulfidic Aquatic	YFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103706231	3300003614	Hypoxic/Sulfidic Aquatic	TPDDIPKGWRLIPIEGGGLGLCLIDMHVFDLLDEPYFKWELAPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103737731	3300003614	Hypoxic/Sulfidic Aquatic	DIPKGWRLIPIEGGGLGLCLIDMHVFDILDEPYFKWELAPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103793053	3300003614	Hypoxic/Sulfidic Aquatic	DIPKGWRLIPIDGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103973201	3300003614	Hypoxic/Sulfidic Aquatic	IPKGWRLIPIEGGGLGLCLIDMHVFDLLDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_103980663	3300003614	Hypoxic/Sulfidic Aquatic	GLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_104067291	3300003614	Hypoxic/Sulfidic Aquatic	IIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_104136601	3300003614	Hypoxic/Sulfidic Aquatic	IPIEGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_104244341	3300003614	Hypoxic/Sulfidic Aquatic	PYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_104858542	3300003614	Hypoxic/Sulfidic Aquatic	WELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_104865013	3300003614	Hypoxic/Sulfidic Aquatic	TPEDIPKGWRLIPIEGGGLGLCLIDMHVFDIIDEPYFKWELAPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_104908761	3300003614	Hypoxic/Sulfidic Aquatic	TPDDIPKGWRLIPIEGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_105110943	3300003614	Hypoxic/Sulfidic Aquatic	VFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_105275113	3300003614	Hypoxic/Sulfidic Aquatic	FKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
JGI20129J51890_105853813	3300003614	Hypoxic/Sulfidic Aquatic	EPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_106147821	3300003614	Hypoxic/Sulfidic Aquatic	CLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_106390881	3300003614	Hypoxic/Sulfidic Aquatic	DMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_106476513	3300003614	Hypoxic/Sulfidic Aquatic	GLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_106524332	3300003614	Hypoxic/Sulfidic Aquatic	DMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDNGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_106536621	3300003614	Hypoxic/Sulfidic Aquatic	LGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_106735321	3300003614	Hypoxic/Sulfidic Aquatic	IDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_106852322	3300003614	Hypoxic/Sulfidic Aquatic	IPPGSRLIPIEGGGLGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_106888702	3300003614	Hypoxic/Sulfidic Aquatic	HVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_107104901	3300003614	Hypoxic/Sulfidic Aquatic	KWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_107194971	3300003614	Hypoxic/Sulfidic Aquatic	DIPKGWRLIPIEGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_107279492	3300003614	Hypoxic/Sulfidic Aquatic	LCLIDMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_107363692	3300003614	Hypoxic/Sulfidic Aquatic	CLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_107389792	3300003614	Hypoxic/Sulfidic Aquatic	LTGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_107535001	3300003614	Hypoxic/Sulfidic Aquatic	LCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDKGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_107900922	3300003614	Hypoxic/Sulfidic Aquatic	TPDDIPKGWRLIPIEGGGLGLCLIDMHVFDLLDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_107952451	3300003614	Hypoxic/Sulfidic Aquatic	MHVFDLLDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_107999442	3300003614	Hypoxic/Sulfidic Aquatic	PGSRLIPIEGGGLGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
JGI20129J51890_108044881	3300003614	Hypoxic/Sulfidic Aquatic	IDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_108148612	3300003614	Hypoxic/Sulfidic Aquatic	IEGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
JGI20129J51890_108158021	3300003614	Hypoxic/Sulfidic Aquatic	LCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
Ga0073350_1453622	3300005223	Hotspring	IEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLNLTASHYLAPPVALRFDGTLYNTP*
Ga0081534_1232382	3300005959	Hypoxic/Sulfidic Aquatic	WRLIPIEGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
Ga0079044_10296311	3300006855	Hot Spring	IDMHVFDLLDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
Ga0105109_10067284	3300007812	Hot Spring	VFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
Ga0105117_10243552	3300007814	Hot Spring	FDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
Ga0105117_10411151	3300007814	Hot Spring	MPDDIPKGWRLIPIEGGGLGLCLIDMHVFDILDEPYFKWELAPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
Ga0105112_10077353	3300007816	Hot Spring	LGSCLIDMAVFNVIEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLSLTASHYLAPPVAIRFDGTLYNTP*
Ga0105112_10139283	3300007816	Hot Spring	KWELYPWNPPPGGLSEDLHFFKKLLDKGIQPCADLQVTASHYLAPPVALRFDGTLYNTP*
Ga0105112_10145862	3300007816	Hot Spring	LVLCLIDMHVFDLLDEPYFKWELAPWNPPPGGLSEDLYFFKKLIDRGIQPYADLQVTASHYLAPPVALKFDGTLYNTP*
Ga0167615_10421342	3300013009	Hot Spring	GLCLIDMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP*
Ga0209739_1176991	3300025360	Hot Spring Sediment	WRLIPIEGGGLGLCLIDMHVFDLLDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209739_1272311	3300025360	Hot Spring Sediment	PIEGGGLGLCLIDMHVFDVLDEPYFRWELYPWNPPPGGLSEDLYFFKKLIDRGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209739_1371461	3300025360	Hot Spring Sediment	GLCLIDMHVFDVLDEPYFRWELYPWNPPPGGLSEDLYFFKKLIDRGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10104783	3300025371	Hypoxic/Sulfidic Aquatic	CLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10134653	3300025371	Hypoxic/Sulfidic Aquatic	PKGWRLIPIDGGGLGLCLIDMHVFDLLDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10326763	3300025371	Hypoxic/Sulfidic Aquatic	LCLIDMHVFDLLDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10337043	3300025371	Hypoxic/Sulfidic Aquatic	VFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10378973	3300025371	Hypoxic/Sulfidic Aquatic	FDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10381361	3300025371	Hypoxic/Sulfidic Aquatic	DIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10406501	3300025371	Hypoxic/Sulfidic Aquatic	LIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10407452	3300025371	Hypoxic/Sulfidic Aquatic	LCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10426912	3300025371	Hypoxic/Sulfidic Aquatic	PKGWRLIPIDGGGLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10472163	3300025371	Hypoxic/Sulfidic Aquatic	IDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0209224_10490522	3300025371	Hypoxic/Sulfidic Aquatic	PPGSRLIPIEGGGLGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP
Ga0209120_10733802	3300025462	Hot Spring	PGYRLVPIEGGGLGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNVP
Ga0209012_10257733	3300025503	Hypersaline Mat	PKNWRLIPIDGGGLGICLIDMVVFNDIEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLNITASHYLAPPVALRFDGTLYNTP
Ga0208448_1065411	3300026813	Hot Spring	PEDIPKGWRLIPIEGGGLGLCLIDMHVFDVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0208314_1312731	3300026877	Hot Spring	KNWSLIPIDGGGLGSCLIDMAVFNVIEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLSLTASHYLAPPVALRFDGTLYNTP
Ga0208313_1021249	3300026882	Hot Spring	DVIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0208313_1304171	3300026882	Hot Spring	GLGLCLIDMHVFDIIDEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0208683_1280331	3300026906	Hot Spring	GGLGSCLIDMAVFNVIEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLSLTASHYLAPPVALRFDGTLYNTP
Ga0208312_1125231	3300027931	Hot Spring	GGLGLCLIDMRVFNVIDEPYFKWELYPWNPPPGGLSEDLYFFKKVIDHGIQPYADLQVTASHYLAPPVALKIDGTLYNTP
Ga0208429_1163113	3300027932	Hot Spring	GLCLIDMAVFNVIEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLSLTASHYLAPPVAIRFDGTLYNTP
Ga0311280_1084321	3300029569	Sediment	IEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLNITASHYLAPPVALRFDGTLYNTP
Ga0311280_1132251	3300029569	Sediment	PEDIPKNWRLIPIEGGGLGICLIDMNVFNDIEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLNITASHYLAPPVALRFDGTLYNTP
Ga0315298_14196582	3300031749	Hot Spring Microbial Mat	LVDMHVFDVIEEPYFKWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0326758_1205611	3300033159	Hot Spring Sediment	GLCLIDMHVFDLLDEPYFRWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP
Ga0326759_15408_334_549	3300033781	Hot Spring Water	MHVFDLLDEPYFRWELYPWNPPPGGLSEDLYFFKKLIDKGIQPYADLQVTASHYLAPPVALKFDGTLYNTP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102130

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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