NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F102721

Metagenome / Metatranscriptome Family F102721

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F102721
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 72 residues
Representative Sequence VKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN
Number of Associated Samples 84
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 4.95 %
% of genes from short scaffolds (< 2000 bps) 3.96 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.010 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(32.673 % of family members)
Environment Ontology (ENVO) Unclassified
(52.475 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.327 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 19.42%    β-sheet: 0.00%    Coil/Unstructured: 80.58%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.22
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00578AhpC-TSA 0.99
PF04542Sigma70_r2 0.99
PF00581Rhodanese 0.99
PF12760Zn_Tnp_IS1595 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.99
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.99
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.99
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.01 %
All OrganismsrootAll Organisms0.99 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004631|Ga0058899_12291604Not Available621Open in IMG/M
3300011023|Ga0138548_100721Not Available744Open in IMG/M
3300018009|Ga0187884_10035130All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales2459Open in IMG/M
3300019157|Ga0184573_107259Not Available747Open in IMG/M
3300019170|Ga0184570_118296Not Available725Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil32.67%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.89%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland10.89%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland7.92%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds3.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.96%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.96%
Wetland SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil1.98%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003295Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 67 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300004132Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF240 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004294Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 33 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004475Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004478Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004486Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 39 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004499Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 82 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004555Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 7 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004601Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004617Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004620Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004973Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006861Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300008785Microbial communities from wetland soil in Czech Republic - R1_cDNAEnvironmentalOpen in IMG/M
3300008786Microbial communities from wetland soil in Czech Republic - M3_cDNAEnvironmentalOpen in IMG/M
3300011023Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 29 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011038Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 28 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011040Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 79 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011044Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 26 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011053Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011058Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011063Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 15 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011074Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 40 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011075Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011076Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011078Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011081Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011082Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011088Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011089Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300016700Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300019157Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019165Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019170Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019183Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019184Soil microbial communities from Bohemian Forest, Czech Republic ? CSA2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019187Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019189Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019211Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019230Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019242Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019256Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019275Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021855Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021860Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021929Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - DR:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023537Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023539Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023544Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023547Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300023672Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030526Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE044SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030529Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO740-VDE013SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030543Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE107SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030549Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO137-ANR102SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030583Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE023SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030764Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030805Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030812Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030880Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030884Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030962Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030976Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031024Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031040Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031235Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaGHost-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031955Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0006866J48919_10046813300003295Peatlands SoilEVTRADASRKEFSWQIWRVREPADTEYSSTAQLAMQGSVEVRGASKAQPEVETQGAS*
Ga0006866J48919_10163813300003295Peatlands SoilAAPEVTKAGESRRLFSWQIRKVREPAEIEYSSTAQPAMQGSIEARGASEAQPEVETSDASRVSRNR*
Ga0058902_125018513300004132Forest SoilPSQRVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGASKAQPEVETPGASQAN*
Ga0068945_101149913300004294Peatlands SoilLAAPEVTKAGESRRLFSWQIRKVREPAEIEYSSTAQPAMQGSIEARGASEAQPEVETSDASRVSRNR*
Ga0068945_101835923300004294Peatlands SoilAPEVTRADASRQEFSWQIRRVHEPADTEYSSTAQLAMQGSVEARGASKAQPEVEASDASRMNRDR*
Ga0068969_102677713300004475Peatlands SoilRQPSQRVKPEAKAAEGSLVAPEIAKADASRRLLSWQIRRVHEPVNTEYSSTALPAMQGSVEARGASKAQPEVSAHSAS*
Ga0068972_101369923300004478Peatlands SoilAKAAEGSLVAPEIAKADASRRLLSWQIRRVHEPVNTEYSSTALPAMQGSVEARGASKAQPEVSAHSAS*
Ga0068972_108674413300004478Peatlands SoilAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN*
Ga0068951_10809113300004486Peatlands SoilPEVTKAGESRRLFSWQIRKVREPAEIEYSSTAQPAMQGSIEARGASEAQPEVETSDASRVSRNR*
Ga0068984_112132023300004499Peatlands SoilPSQRVKPGAKAAEGSLAAPEVTKAGESRRLFSWQIRKVREPAEIEYSSTAQPAMQGSIEARGASEAQPEVETSDASRVSRNR*
Ga0068922_101560813300004555Peatlands SoilLAAPEIAKTDASRRLLSWQIRRMQGPAKVEYSSTAQSAMQGSMEARGASKAQPEVDANGASRAS*
Ga0068934_101042213300004601Peatlands SoilPGAKAAEGSLAAPEVTKAGESRRLFSWQIRKVREPAEIEYSSTAQPAMQGSIEARGASEAQPEVETSDASRVSRNR*
Ga0068955_100616513300004617Peatlands SoilESENRRQPSQRVKPEAKAAEGSLVAPEIAKADASRRLLSWQIRRVHEPVNTEYSSTALPAMQGSVEARGASKAQPEVSAHSAS*
Ga0068957_100581823300004620Peatlands SoilRRQPSQRVKPEAKAAEGSLVAPEIAKADASRRLLSWQIRRVHEPVNTEYSSTALPAMQGSVEARGASKAQPEVSAHSAS*
Ga0068957_101250313300004620Peatlands SoilAAPEITKADASRKLSSWQIRKVREPAETEYSSTAQLAMQGSVEVRGVSKAQPEVETPGASRAN*
Ga0058899_1229160413300004631Forest SoilHRQPSQRVKPEAKAEEGSLVAPEIAKADASRTLLSWQIRKMHEPVETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR*
Ga0072322_100085913300004973Peatlands SoilVTKAGESRRLFSWQIRKVREPAEIEYSSTAQPAMQGSIEARGASEAQPEVETSDASRVSRNR*
Ga0063777_101752913300006861Peatlands SoilVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN*
Ga0103638_100092113300008785Wetland SoilRVKPEAKATEGSLVAPEIAKADASRTLLSWQIRKMQGPVDTENSSKAPPSMQRSVEARGASEAQPEIEKLGAS*
Ga0103639_100430113300008786Wetland SoilESENRRQPSQRVKPGAKAQEGSLAAPEIAKADESRKLISWQIRKIREPAEIEYSSTAQPAMQGSVEVRGVSKAQPEVETPGASRVNRNR*
Ga0138548_10072113300011023Peatlands SoilNRRKPSQRVKPEAKAAEGSLVAPDIAKADASRKLLSWQIRRVREPVDTEYSSAAQLPMQGSVEARGASKAQPEVETSDASRVSRDR*
Ga0138547_11052313300011038Peatlands SoilKAGESRRLFSWQIRKVREPAEIEYSSTAQPAMQGSIEARGASEAQPEVETSDASRVSRNR
Ga0138547_11694513300011038Peatlands SoilLAAPEITKADASRKLSSWQIRKVREPAEIEYSSTAQPAMQGSVEVRGVSKAQPEVETPGASQAV*
Ga0138587_11774113300011040Peatlands SoilNRRKPSQRVKPEAKVAEGSLVAPDIAKADASRKLLSWQIRRVREPVDTEYSSAAQLPMQGSVEARGASKAQPEVETSDASRVSRNR*
Ga0138545_15010013300011044Peatlands SoilVKPEAKATEGSLVAPEIAKADASRTLLSWQIRKMQGPVDTENSSKAPPSMQRSVEARSASKAQPDVEKLGAS*
Ga0138531_15173313300011053Peatlands SoilEAKATEGSLVAPEIAKADASRTLLSWQIRKMQGPVDTENSSKAPPSMQRSVEARGASKAQPEIEKFGAS*
Ga0138541_108999613300011058Peatlands SoilRQPSQRVKPGAKAREGSLAAPEDANADASRTLLSWQIRKMQGPVETENSSKAPPSMQRSVEARGASKAQPEIEKFGAS*
Ga0138537_112973813300011063Peatlands SoilQPSQRVKPEAKATEGSLVAPEIAKADASRTLLSWQIRKMQGPVDTENSSKAPPSMQRSVEARGASKAQPEIEKFGAS*
Ga0138559_112723413300011074Peatlands SoilQEGSLAAPEITKADASRKLSSWQIRKVREPAEIEYSSTAQPAMQGSVEVRGVSKAQPEVETPGASQAV*
Ga0138555_110763713300011075Peatlands SoilAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN*
Ga0138574_116320513300011076Peatlands SoilEVTKAGESRRLFSWQIRKVREPAEIEYSSTAQPAMQGSIEARGASEAQPEVETSDASRVSRNR*
Ga0138565_105215413300011078Peatlands SoilQRVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKVREPAETEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN*
Ga0138565_109860313300011078Peatlands SoilPSQRVKPEAKATEGSLVAPEIAKADASRTLLSWQIRKMQGPVDTENSSKAPPSMQRSVEARGASKAQPEIEMFGAS*
Ga0138575_117360913300011081Peatlands SoilRQPSQRVKPEAKATEGSLVAPEIAKADASRTLLSWQIRKMQGPVDTENSSKAPPSMQRSVEARGASKAQPEIEMFGAS*
Ga0138526_114472523300011082Peatlands SoilRVKPGAKAQEGLLAAPEITKADASRKLSSWQIRKVREPVEIEYSSTAQPAMQGSVEVRGVSKAQPEVETLGASRAN*
Ga0138576_106383013300011088Peatlands SoilRQPSQRVKPEAKATEGSLVAPEIAKADASRTLLSWQIRKMQSPVNIENSSKAPPSMQRSVEARSASKAQPDVEKLGAS*
Ga0138573_114305613300011089Peatlands SoilQPSQRVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN*
Ga0150983_1429350813300011120Forest SoilAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSLEVRGVSKAQPEVETPGASQAD*
Ga0150983_1615011413300011120Forest SoilSRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGASKAQPEVETPGASQTD*
Ga0181513_103870313300016700PeatlandEGSLAAPEITKADASRKLSSWQIRKVREPAEIEYASTALPAMQGAVEVRGISKAQPEVETPGARRAN
Ga0181513_116553513300016700PeatlandAREGSLAAPEITKADASRKLSSWQIRKVREPAEIEYSSAAQPAMQGSVEVRGVSKAQPEVETLGASRAN
Ga0181505_1040848713300016750PeatlandLAAPEITKADASRKLSSWQIRKVREPAEIEYSSTALPTSQGSVEVRGVSKAQPEVEAAKSSLHAG
Ga0187884_1003513013300018009PeatlandSENRRQPSQRVKPGAKAQEGLLVAPEITKADASRKLSSWQIRKVREPVEIEYSSTAQPAMQGSVEVRGVPKAQPEVETLGASRAI
Ga0187857_1055379313300018026PeatlandVKPGAKAAEGSLAAPGDAKAGESRKLFDWQIRRMREPGEIEYSSTPKPAMQGSVETRGALKAQPEVGPRGA
Ga0184573_10725913300019157SoilNRRQPSQRVKPEAKAEEGSLVAPEIAKADASRRLLSWQIRKMHEPAETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0184589_13464413300019165SoilQRVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN
Ga0184570_11829613300019170SoilQPSQRVKPEAKAEEGSLVAPEIAKADASRRLLSWQIRKMHEPAETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0184601_11445323300019183SoilEDRRKPSQRLKPGAKAQEGSLAAPEVTRADASRKEFSWQIWRVREPADTEYSSTAQLAMQGSVEVRGASKAQPEVETQGAS
Ga0184590_10773913300019184SoilAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGVSKAQPEVETPGASRAD
Ga0184584_13968513300019187SoilQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN
Ga0184585_14116613300019189SoilRQPSQRVKPEAKAEEGSLVAPEIAKADASRRLLSWQIRKMHEPAETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0187799_110966313300019211PeatlandTKADESRKLFSWQIRRVREPADIEYSSAAQLPMQGSVEARGVSKAQPEVGTPDVSLVNRN
Ga0187799_124100113300019211PeatlandSQRVKPGAKAREGSLAAPEDTKADESRKLFSWQIRRVREPVDIEYSSAAQLPMQGSVETRGVSKAQPEVEKPDASQANRNR
Ga0187799_127979123300019211PeatlandQRVKPGAKAREGSLAAPEDTRFGESRELFSWQIRRVHEPAEIEYSSAAQPAMQGSVEARGASKAQPEVGTFGASRAERNR
Ga0181501_124959613300019230PeatlandEITKADASRKLSSWQIRKVREPAEIEYSSAAQPAMQGSVEVRGVSKAQPEVETLGASRAN
Ga0181502_147076223300019242PeatlandSDNRRQPSQRVKPEAKATEGSLVAPEIAKADASRTLLSWQIRKMQGPVDTENSSKAPPSMQRSVEARGASKAQPEIEKLGAS
Ga0181508_160472313300019256PeatlandVGASRKLFSWKIRKMREPAEIEYSSAAQLPMQGSVEVRGGSKAQPEVETPGASQAD
Ga0187798_103797913300019275PeatlandKPGAKAAEGSLGAPGDTKAGESRKLFDWQIRRMCEPVDTEYSSAAQLPMQGSVETRGVSEAQPEVEKPDASQANRSR
Ga0187798_111837713300019275PeatlandVKPGAKAREGLLAAPEEAKNRRKSELFSWQIRKVREPAEAKYSSAAQLPMQGSAEVRGAS
Ga0187800_105182713300019278PeatlandDRRQPSQRVKPGAKAREGLLAAPEDTKIGESRKLFSWQIRKMHEPADIEYSSAAQPTMQGPVEARGASKAQPEVEKLGASRVDRNR
Ga0187800_105379413300019278PeatlandSQRVKPEAKAAEGSLAAPDSAKADASRRLFNWQIRRVHEPAEMEYSSTAEPAMQGSIEARGASEAQPDVEAHGASRVNRNR
Ga0187800_119321913300019278PeatlandDRRQPSQRVKPEAKAAEGSLAAPEIAKAAARRRLLSWQIRRMREPADIEYSSAAQLAMQGSVEARGALKAQPEVETRGASCVNRDR
Ga0187800_167842713300019278PeatlandQRVKPEAKAAEGSLAAPDSAKADASRRLFNWQIRRMHEPAEMEYSSTAQPAMQGSIEARGASEAQPDVETHGASRVNRNR
Ga0187797_103016913300019284PeatlandDRRQPSQRVKPGAKAREGLLAAPEDTKIGESRKLFSWQIRKMHEPADIEYSSAAQPTMQGPVEARGSSKAQPEVEKLGASRVDRNR
Ga0187797_169144313300019284PeatlandEAKAAEGSLAAPEVTNAGASRKLFSWQIRKMHEPVENEYSSSAQLAMQGSNEIRGASKAQPEGETLGAS
Ga0213854_134858323300021855WatershedsQRVKPEAKAKEGSLVAPEIAKADASRTLLSWQIRKMHEPAEFEYSSTAQPAMQGPSEARGASKAQPEVEGCGASRADQNR
Ga0213851_127727123300021860WatershedsAGGTKSRRESENRRQPSQRVKPEAKAAEGSLVAPEIAKADASRTLLSWQIRRMHEPVDIEYSSTAQSAMQGPIEARGASKAQPEV
Ga0213853_1044254423300021861WatershedsQPSQRVKPEAKAKEGSLVAPEIAKADASRTLLSWQIRKMHEPAEFEYSSTAQPAMQGPSEARGASKAQPEVEGCGASRADQNR
Ga0213845_100760113300021929WatershedsSLAAPKNTKADASRKLSNWQIRKMREPAEIEYSSAAQLPMQGSVEVRGVSKAQPEV
Ga0242647_102464413300022505SoilVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGASKAQPEVETPGASQTD
Ga0222729_106400313300022507SoilVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVMGASKAQPEVETPGASQTD
Ga0222728_105705913300022508SoilKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGASKAQPEVETPGASQTD
Ga0242673_104634913300022716SoilAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGASKAQPEVETPGASQTD
Ga0247541_10110513300023537SoilSQRVKPEAKAEEGSLVAPEIAKADASRRLLSWQIRKMHEPAETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0247555_10181313300023539SoilDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN
Ga0247542_10208613300023544SoilAKAEEGSLVAPEIAKADASRRLLSWQIRKMHEPAETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0247554_10248313300023547SoilAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN
Ga0247553_10488013300023672SoilAPEDAKVGASRKLFSWQIRKVREPAEIEYSSAAQLPMQGSVEARGVSKAQPEVETPGASRVN
Ga0210267_101390813300030526SoilVKPEAKAEEGSLVAPEIAKADASRTLLSWQIRKMHEPVETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0210284_194254113300030529SoilEGSLAASEDAKVGASRKLFSWKIRKMREPAEIEYSSAAQLPMQGSVEVRGGSKAQPEVETPGASQAD
Ga0210289_157778813300030543SoilNRRQPSQRVKPEAKAEEGSLVAPEIAKADASRTLLSWQIRKMHEPVETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0210257_1056349013300030549SoilVKTQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGASKAQPEVETPGASQTD
Ga0210262_104982423300030583SoilRQPSQRVKPEAKAEEGSLVAPEIAKADASRTLLSWQIRKMHEPVETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0265462_1212269313300030738SoilKSAQAESLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGASKAQPEVETPGASQTD
Ga0265720_100696813300030764SoilPSQRVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGVSKAQPEVETPGASQAD
Ga0265756_10705113300030805SoilVKPGAKAQEGSLAAPEDAKVGASRRLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGVSKAQPEVETPGASQAD
Ga0265734_10155013300030812SoilVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSMEVRGASKAQPEVETPGAS
Ga0265734_10325013300030812SoilPSQRVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKKREPAEIEYSSAAQLPMQGSVEVRGVSKAQPEVETPGVS
Ga0265776_11327613300030880SoilAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEARGASKAQPEVEAQGASRANRNR
Ga0265758_10505113300030884SoilVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGVSKAQPEVETPGVSQAD
Ga0138297_106511913300030962SoilVKPGAKAQEGSLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGVSKAQPEVETPGASQAD
Ga0265739_10291813300030976SoilAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSVEVRGVSKAQPEVETPGVSQAD
Ga0265724_10171823300031024SoilLAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSMEVRGASKAQPEVETPGA
Ga0265754_101282913300031040SoilAAPEDAKVGASRKLFSWQIRKMREPAEIEYSSAAQLPMQGSMEVRGASKAQPEVETPGASQAD
Ga0265330_1051925013300031235RhizosphereVKPGAKAQEGSLAAPEITKADASRKLSSWQTRKVREPAEIEYSSTAQPAMQGSVEVRGVSKAQPE
Ga0310686_11867900013300031708SoilVKPEAKAEEGSLVAPEIAKADASRRLLSWQIRKMHEPAETEYSSTAQPAMQGSVKARGASKAQPEVETFDASRVGRNR
Ga0316035_10876413300031955SoilRVKPGVKAQEGSLAAPEVTRADASRKEFSWQIWRVREPADTEYSSTAQLAMQGSVEVRGASKAQPEVETQGAS
Ga0335069_1279134213300032893SoilQRVKPEAKAAEGSLVAPEIAKVDASRKLLSWQIRRVHEPVDTEYSSTAQPAMQGSVEIRGASKAQPEVDANGASRTS
Ga0335072_1039163223300032898SoilNHHQPSQRVKPEAKAAEGSLAAPEIAKADASRRLLSWQIRRVHEPAEIEYSSAAQLPMQGPIEARGASKAQPEVEAHGASRAN
Ga0335073_1013316723300033134SoilVKPEAKAAEGSLVAPEIAKAAARRRLLSWQIRRVHEPADIEYSSAAQLAMQGSVEARGASQAQPEVAAHGASRVQ
Ga0335073_1053653623300033134SoilVKPEAKAAEGSLAAPEIAKADASRRLLSWQIRRVHEPAEIEYSSAAQLPMQGPIEARGASKAQPEVEAHGASRAN

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.