Metagenome / Metatranscriptome Family F105430

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F105430
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	54 residues
Representative Sequence	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAIDTLP
Number of Associated Samples	74
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	97.92 %
% of genes near scaffold ends (potentially truncated)	91.00 %
% of genes from short scaffolds (< 2000 bps)	70.00 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (96.000 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (51.000 % of family members)
Environment Ontology (ENVO)	Unclassified (94.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (67.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.98% β-sheet: 5.88% Coil/Unstructured: 43.14%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF08706	D5_N	27.00
PF09853	DUF2080	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.00 %
Unclassified	root	N/A	4.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.00 %
Unclassified	root	N/A	4.00 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	96.00 %
Unclassified	root	N/A	4.00 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	96.00 %
Unclassified	root	N/A	4.00 %

Name	Rank	Taxonomy	Distribution
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	81.00 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	12.00 %
Unclassified	root	N/A	4.00 %

Name	Rank	Taxonomy	Distribution
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	81.00 %
Euryarchaeota archaeon ADurb.Bin009	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	12.00 %
Unclassified	root	N/A	4.00 %

Name	Rank	Taxonomy	Distribution
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	80.00 %
Euryarchaeota archaeon ADurb.Bin009	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	12.00 %
Unclassified	root	N/A	4.00 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	1.00 %

Name	Rank	Taxonomy	Distribution
Methanomicrobiaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	49.00 %
Euryarchaeota archaeon ADurb.Bin009	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	12.00 %
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	9.00 %
Unclassified	root	N/A	4.00 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	1.00 %

Name	Rank	Taxonomy	Distribution
Methanoculleus	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	47.00 %
Euryarchaeota archaeon ADurb.Bin009	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	12.00 %
Methanomicrobiales archaeon HGW-Methanomicrobiales-6	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	9.00 %
Unclassified	root	N/A	4.00 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	1.00 %
Methanofollis	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis	1.00 %

Name	Rank	Taxonomy	Distribution
unclassified Methanoculleus	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus	35.00 %
Euryarchaeota archaeon ADurb.Bin009	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	12.00 %
Methanomicrobiales archaeon HGW-Methanomicrobiales-6	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	9.00 %
Methanoculleus bourgensis	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	8.00 %
Unclassified	root	N/A	4.00 %
Methanofollis ethanolicus	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis → Methanofollis ethanolicus	1.00 %
Methanoculleus thermophilus	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus thermophilus	1.00 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	1.00 %

Name	Rank	Taxonomy	Distribution
Methanoculleus sp. 7T	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	35.00 %
Euryarchaeota archaeon ADurb.Bin009	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	12.00 %
Methanomicrobiales archaeon HGW-Methanomicrobiales-6	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	9.00 %
Methanoculleus bourgensis	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	8.00 %
Unclassified	root	N/A	4.00 %
Methanofollis ethanolicus	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis → Methanofollis ethanolicus	1.00 %
Methanoculleus thermophilus	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus thermophilus	1.00 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918007\|Coalbed_GAIGPUK02JH6Z7	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	555	Open in IMG/M
3300002164\|JGI24708J26588_10049507	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	1570	Open in IMG/M
3300002166\|JGI24713J26584_10018439	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	2521	Open in IMG/M
3300002166\|JGI24713J26584_10022951	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	2063	Open in IMG/M
3300002168\|JGI24712J26585_10064081	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1447	Open in IMG/M
3300002170\|JGI24711J26586_10084860	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	899	Open in IMG/M
3300002174\|JGI24710J26742_10058555	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	1615	Open in IMG/M
3300002378\|JGI24502J29692_10070231	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	3219	Open in IMG/M
3300003306\|Ga0004534J46558_1008316	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	2656	Open in IMG/M
3300003306\|Ga0004534J46558_1017515	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	2635	Open in IMG/M
3300003667\|LSCM3L_1006757	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2840	Open in IMG/M
3300006225\|Ga0082206_102158	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	4314	Open in IMG/M
3300006387\|Ga0079069_1040251	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae	3735	Open in IMG/M
3300006388\|Ga0079062_1068123	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3571	Open in IMG/M
3300006395\|Ga0079066_1061657	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	1473	Open in IMG/M
3300006587\|Ga0079078_1017787	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	2005	Open in IMG/M
3300006591\|Ga0079071_1270569	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	559	Open in IMG/M
3300006600\|Ga0079065_1024600	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	537	Open in IMG/M
3300006940\|Ga0079099_1036261	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1060	Open in IMG/M
3300009122\|Ga0118674_1130427	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	532	Open in IMG/M
3300009360\|Ga0118672_1095754	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	780	Open in IMG/M
3300009362\|Ga0118673_1085154	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	910	Open in IMG/M
3300009607\|Ga0123327_1062533	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	1469	Open in IMG/M
3300009655\|Ga0116190_1026936	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	2744	Open in IMG/M
3300009656\|Ga0123329_1251269	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	623	Open in IMG/M
3300009656\|Ga0123329_1301846	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	556	Open in IMG/M
3300009657\|Ga0116179_1074815	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1322	Open in IMG/M
3300009657\|Ga0116179_1188882	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	701	Open in IMG/M
3300009657\|Ga0116179_1260171	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	570	Open in IMG/M
3300009657\|Ga0116179_1272030	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	555	Open in IMG/M
3300009658\|Ga0116188_1130257	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	960	Open in IMG/M
3300009663\|Ga0116181_1078864	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1375	Open in IMG/M
3300009663\|Ga0116181_1279525	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	605	Open in IMG/M
3300009671\|Ga0123334_1086684	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1625	Open in IMG/M
3300009671\|Ga0123334_1420435	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	559	Open in IMG/M
3300009673\|Ga0116185_1117778	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1295	Open in IMG/M
3300009682\|Ga0116172_10031847	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3448	Open in IMG/M
3300009707\|Ga0116195_1030901	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1470	Open in IMG/M
3300009707\|Ga0116195_1031123	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1461	Open in IMG/M
3300009715\|Ga0116160_1091714	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1328	Open in IMG/M
3300009770\|Ga0123332_1209505	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	819	Open in IMG/M
3300009773\|Ga0123333_10394760	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	562	Open in IMG/M
3300009781\|Ga0116178_10200027	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1019	Open in IMG/M
3300010340\|Ga0116250_10133181	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1591	Open in IMG/M
3300010340\|Ga0116250_10468785	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	717	Open in IMG/M
3300010346\|Ga0116239_10115215	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	2170	Open in IMG/M
3300010356\|Ga0116237_11248050	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	616	Open in IMG/M
3300010357\|Ga0116249_10398799	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1268	Open in IMG/M
3300010411\|Ga0136993_10117859	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	504	Open in IMG/M
3300014203\|Ga0172378_10443367	All Organisms → cellular organisms → Archaea → Euryarchaeota	975	Open in IMG/M
3300014206\|Ga0172377_10129046	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	2273	Open in IMG/M
3300019224\|Ga0180029_1190312	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	581	Open in IMG/M
3300025393\|Ga0208041_1009698	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2462	Open in IMG/M
3300025393\|Ga0208041_1018477	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1443	Open in IMG/M
3300025393\|Ga0208041_1038823	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanofollis → Methanofollis ethanolicus	811	Open in IMG/M
3300025408\|Ga0208462_1020049	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1462	Open in IMG/M
3300025618\|Ga0208693_1016761	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	3288	Open in IMG/M
3300025618\|Ga0208693_1121135	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	705	Open in IMG/M
3300025618\|Ga0208693_1163363	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	551	Open in IMG/M
3300025657\|Ga0208823_1048382	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	1609	Open in IMG/M
3300025657\|Ga0208823_1070257	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1193	Open in IMG/M
3300025677\|Ga0209719_1083154	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1011	Open in IMG/M
3300025682\|Ga0209718_1032252	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	2279	Open in IMG/M
3300025682\|Ga0209718_1085071	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1064	Open in IMG/M
3300025682\|Ga0209718_1199934	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	544	Open in IMG/M
3300025689\|Ga0209407_1202320	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	529	Open in IMG/M
3300025708\|Ga0209201_1014375	All Organisms → cellular organisms → Archaea → Euryarchaeota	4441	Open in IMG/M
3300025714\|Ga0208458_1134799	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	835	Open in IMG/M
3300025730\|Ga0209606_1103772	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1070	Open in IMG/M
3300025748\|Ga0208459_1097193	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1147	Open in IMG/M
3300025772\|Ga0208939_1136860	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	887	Open in IMG/M
3300025859\|Ga0209096_1068721	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1535	Open in IMG/M
3300025861\|Ga0209605_1152778	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	892	Open in IMG/M
3300025877\|Ga0208460_10048438	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1873	Open in IMG/M
3300026194\|Ga0209509_1020519	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2147	Open in IMG/M
3300026250\|Ga0209612_1022239	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2486	Open in IMG/M
3300026250\|Ga0209612_1104648	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	783	Open in IMG/M
3300026252\|Ga0209722_1011105	All Organisms → cellular organisms → Archaea → Euryarchaeota	4437	Open in IMG/M
3300026311\|Ga0209723_1049169	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	2084	Open in IMG/M
3300027510\|Ga0209537_1033499	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1917	Open in IMG/M
3300027510\|Ga0209537_1037516	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon HGW-Methanomicrobiales-6	1721	Open in IMG/M
(restricted) 3300028567\|Ga0255342_1089996	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus bourgensis	1475	Open in IMG/M
(restricted) 3300028568\|Ga0255345_1202707	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	795	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1183588	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	859	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1309519	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	577	Open in IMG/M
3300028602\|Ga0265294_10117814	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	2078	Open in IMG/M
3300028602\|Ga0265294_10697642	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	580	Open in IMG/M
3300028624\|Ga0302246_1013912	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2754	Open in IMG/M
3300028626\|Ga0302244_1018892	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1930	Open in IMG/M
3300028627\|Ga0302243_1014229	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → Methanoculleus thermophilus	2524	Open in IMG/M
3300028627\|Ga0302243_1022465	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus	1749	Open in IMG/M
3300028627\|Ga0302243_1052152	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	901	Open in IMG/M
3300028628\|Ga0302249_1060694	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	856	Open in IMG/M
3300028633\|Ga0302236_1033306	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanomicrobiaceae → Methanoculleus → unclassified Methanoculleus → Methanoculleus sp. 7T	1500	Open in IMG/M
3300028634\|Ga0302242_1021988	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2147	Open in IMG/M
3300028641\|Ga0302239_1050218	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1024	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	94.00%
Environmental	Environmental	6.00%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	63.00%
Bioreactor	Engineered → Bioreactor	15.00%
Biotransformation	Engineered → Biotransformation	11.00%
Aquatic	Environmental → Aquatic	6.00%
Built Environment	Engineered → Built Environment	4.00%
Solid Waste	Engineered → Solid Waste	1.00%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	63.00%
Anaerobic	Engineered → Bioreactor → Anaerobic	14.00%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	11.00%
Freshwater	Environmental → Aquatic → Freshwater	5.00%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	4.00%
Unclassified	Environmental → Aquatic → Unclassified	1.00%
Landfill	Engineered → Solid Waste → Landfill	1.00%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	63.00%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	14.00%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	11.00%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	5.00%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	1.00%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	1.00%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	63.00%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	14.00%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	11.00%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.00%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	2.00%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	1.00%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	1.00%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	51.00%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	14.00%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	11.00%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	9.00%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	4.00%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	3.00%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	3.00%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	2.00%
Aquatic	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Aquatic	1.00%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	1.00%
Mixed Substrate Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Mixed Substrate Biogas Reactor	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918007	Coalbed microbial communities from New Mexico, USA - 340	Environmental	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002166	Biogas fermentation microbial communities from Germany - Plant 4 DNA1	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300003306	Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300003667	Lithgow State Coal Mine Metagenomic Study (LSCM 3 Late (Sample 2))	Environmental	Open in IMG/M
3300006225	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 99 accuracy	Engineered	Open in IMG/M
3300006387	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Oil_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006388	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006395	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006587	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Val_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006591	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Ile_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006600	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006940	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_H2B_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300009122	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C13.But.B IBDA	Engineered	Open in IMG/M
3300009360	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.B IBDA	Engineered	Open in IMG/M
3300009362	Syntrophic microbial communities from biogas reactors - R1.C13.But.A IBDA	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009655	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG	Engineered	Open in IMG/M
3300009656	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009658	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR2_MetaG	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009673	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG	Engineered	Open in IMG/M
3300009707	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009770	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA	Engineered	Open in IMG/M
3300009773	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C12 SIP DNA	Engineered	Open in IMG/M
3300009781	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300010411	Aquatic microbial communities from North Sea petroleum storage tank - Cell3b	Environmental	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300019224	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R1-B RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025393	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU002_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025408	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from China - AD_SCU001_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025677	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025748	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025772	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC12_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025859	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025861	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025877	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026250	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026252	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028567 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant14	Engineered	Open in IMG/M
3300028568 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant20	Engineered	Open in IMG/M
3300028570 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant12	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028624	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Trp	Engineered	Open in IMG/M
3300028626	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Phe	Engineered	Open in IMG/M
3300028627	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Met	Engineered	Open in IMG/M
3300028628	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Val	Engineered	Open in IMG/M
3300028633	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Gly	Engineered	Open in IMG/M
3300028634	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Lys	Engineered	Open in IMG/M
3300028641	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Glu	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Coalbed2_3721280	2035918007	Coalbed Water	MTSASSQQFFETFPPNVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLPRDGRPKEWERTTQRSARS
JGI24708J26588_100495072	3300002164	Biogas Fermentantion	MTLSRQXFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGA
JGI24713J26584_100184392	3300002166	Biogas Fermentantion	MTSALSRQFFETFPPEVARGILEGRPLRIHAAKVSVVYEDGEVGFAIDTLPRDNR
JGI24713J26584_100229511	3300002166	Biogas Fermentantion	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVV
JGI24712J26585_100640812	3300002168	Biogas Fermentantion	MTSAASQQFFDAFPPEVARGILEGDRLRVHAAKASVVYEDGEVGFAIDTLPRDNR
JGI24711J26586_100848603	3300002170	Biogas Fermentantion	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKXIRGL*
JGI24710J26742_100585551	3300002174	Biogas Fermentantion	MTSATSQQFFETFPPEVARGILEGRPLRIHAAKVSVVRDKT
JGI24502J29692_100702312	3300002378	Biogas Fermentantion	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLPRDGRPKEWERTTHQ
Ga0004534J46558_10083162	3300003306	Biogas Fermentantion	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVYEDGEVGFAIDTLPRDNRPKE
Ga0004534J46558_10175152	3300003306	Biogas Fermentantion	MTSALSRQFFETFPPEVARGILEGDRLRVHAAKASVVYEDGEVGFAIDTLPRDNRPKEWERTTH
LSCM3L_10067571	3300003667	Coalbed Water	MTSAASQQFFETFPPDVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLPRDGRPAEWE
Ga0082206_1021582	3300006225	Mixed Substrate Biogas Reactor	MTSALSRQFFETFPPEVARAILEGRPLRIHAAKVSVVYEDGEVGFAIDTLPP*
Ga0079069_10402511	3300006387	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRIHAAKVSVVRDGAGYGFAIDTQPRRP
Ga0079062_10681232	3300006388	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLPRDGRPKEWEKTTQRICRILK
Ga0079066_10616572	3300006395	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAIDTLP
Ga0079078_10177871	3300006587	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPDVARGFLAGDRLRIHAAKVSVVREAGTTGFAIDTLPRDG
Ga0079071_12705691	3300006591	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAID
Ga0079065_10246002	3300006600	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAI
Ga0079099_10362612	3300006940	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDT
Ga0118674_11304272	3300009122	Anaerobic Wastewater Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFA
Ga0118672_10957541	3300009360	Anaerobic Wastewater Sludge	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLPRDG
Ga0118673_10851542	3300009362	Anaerobic Wastewater Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAIDTLPRDG
Ga0123327_10625331	3300009607	Anaerobic Biogas Reactor	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAID
Ga0116190_10269362	3300009655	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLPRDGRQAEWE
Ga0123329_12512692	3300009656	Anaerobic Biogas Reactor	MTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVREAGTTGFAIDTLPRDGRPAEWE
Ga0123329_13018462	3300009656	Anaerobic Biogas Reactor	MTSTLSRQFYATFPPEVARGFLEGDRLRIHAAKVSV
Ga0116179_10748151	3300009657	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVYEDGEVGFAIDTLPRDNRPKEWERTTHQICKI
Ga0116179_11888822	3300009657	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVRDGAGYGFAID
Ga0116179_12601711	3300009657	Anaerobic Digestor Sludge	MTSASSQQFFETFPPEVARAFLEGRPLRIHAAKVSVVYEDGEVGFAIDT
Ga0116179_12720302	3300009657	Anaerobic Digestor Sludge	FFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLNRDGRPDEWEKITQRAKKRVLKEVCKL*
Ga0116188_11302572	3300009658	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVREAGTTGFAID
Ga0116181_10788641	3300009663	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVV
Ga0116181_12795252	3300009663	Anaerobic Digestor Sludge	MTSASSQQFFETFPPEVARAFLEGRPLRIHAAKVSVVYEDGEVGFAIDTLPRDNRPKEWE
Ga0123334_10866841	3300009671	Anaerobic Biogas Reactor	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFAIDTLPRDGR
Ga0123334_14204351	3300009671	Anaerobic Biogas Reactor	MTLSRQFFETFPPEVARGLLEGDRLRIHAAKVSAVVYGDGAAFAVDTLNRDGRPDEWEKITQRICRILKSEVERMP
Ga0116185_11177782	3300009673	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFAIDTLPVAGRPAEWE
Ga0116174_101307442	3300009681	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLPRDGRPKEWERTTQKIGRILKS
Ga0116172_100318474	3300009682	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPDVARGFLAGDRLRIHAAKVSVVRDGAGYGFAIDTLNRDGRPAEWERTTQKIGRI
Ga0116195_10309011	3300009707	Anaerobic Digestor Sludge	MTSAASQQFFETFPPDVARAILEGRPLQIHAAKVSVVREAGTTGFAIDTL
Ga0116195_10311231	3300009707	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPDVARAILEGRPLQIHAAKVSVVREAGTTGFAIDTL
Ga0116160_10917142	3300009715	Anaerobic Digestor Sludge	MTPSLSRQFFETFPPEVARAILEGDRLRVHAAKVSVVREAGTTGFAIDTLPAAGRPAE
Ga0123332_12095051	3300009770	Anaerobic Biogas Reactor	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLPRD
Ga0123333_102122042	3300009773	Anaerobic Biogas Reactor	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLPRDGRPKEWERTTQRICRILKG
Ga0123333_103947602	3300009773	Anaerobic Biogas Reactor	MTPTLSRQFFETFPPDVARGFLAGDRLRIHAAKVSVVRDGAGYGFAIDTLN
Ga0116178_102000271	3300009781	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRIHAAKVSVVRDGAGYGFAIDTLNRDGRPAEWERTTQKIGRILKSEV
Ga0116250_101327712	3300010340	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVYEDGEVGFAIDTLPRDNRPKEWERTTHQICKILKR
Ga0116250_101331813	3300010340	Anaerobic Digestor Sludge	MTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLNRDGRPDEWEKITQRAKKRVLKEVCKL*
Ga0116250_104223082	3300010340	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVYEDGEVGFAIDTLPRDNRPKEWERTTHQICKILKR
Ga0116250_104687852	3300010340	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVRDGAGYGFAIDT
Ga0116239_101152153	3300010346	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPDVARAILEGDRLAIHAVRVSVVVEEDTVGFAIDTLPRDGRSAEWEQT
Ga0116237_112480502	3300010356	Anaerobic Digestor Sludge	MTPSLSRQFFDTLPGDVARGFLEGDRLRIHAAKVSVVREAGTTGFAIDTLPAAGRPAE
Ga0116249_103987992	3300010357	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFAIDTL
Ga0136993_101178591	3300010411	Aquatic	MTSAASQQFFDTFPPDIARGILEGRPLRIHAVRVSLVREAGSTGFAIDTL
Ga0172378_104433672	3300014203	Groundwater	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLPRDG
Ga0172377_101290461	3300014206	Landfill Leachate	MTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLPRDGRPKEWE
Ga0180029_11903121	3300019224	Anaerobic Biogas Reactor	MTPTLSRQFFDTFPPKVARGILEGDRLRIHAAKVSVVRDKTGAAFAIDTLPRDGRPAEWEKTTQRICRIL
Ga0208041_10096982	3300025393	Anaerobic Digestor Sludge	MTSAASQQFFETFPPDVARAILEGRPLQIHAAKVSVVREAGTTGF
Ga0208041_10184771	3300025393	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPDVARAILEGRPLQIHAAKVSVVREAGTT
Ga0208041_10388232	3300025393	Anaerobic Digestor Sludge	MTPSLSRQFFDTLPGDVARGFLEGDRLRIHAAKVSVVREAGTTG
Ga0208462_10200491	3300025408	Anaerobic Digestor Sludge	MTSAASQQFFETFPPDVARAILEGRPLQIHAAKVSVVREAGTTGFA
Ga0208693_10167613	3300025618	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVR
Ga0208693_11211352	3300025618	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVRDGAGYGFAIDT
Ga0208693_11633632	3300025618	Anaerobic Digestor Sludge	RQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLNRDGRPDEWEKITQRAKKRVLKEVCKL
Ga0208823_10483823	3300025657	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAI
Ga0208823_10702573	3300025657	Anaerobic Digestor Sludge	MTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLNRDGRPDEWEKITQRAKKRVLKEVCKL
Ga0209719_10831541	3300025677	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFAIDTLPRDG
Ga0209718_10322522	3300025682	Anaerobic Digestor Sludge	MTPSLSRQFFETLPPEVARGILEGRPLRIHAAKVSVVRDKTGAAFAIDTLPRDGRPKEWERTTQKICKIL
Ga0209718_10850711	3300025682	Anaerobic Digestor Sludge	MTPSLSRQFFETFPPEVARAILEGDRLRIHAAKVSLVREAGTTGFAI
Ga0209718_11999341	3300025682	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSLVREAGTT
Ga0209407_12023201	3300025689	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTG
Ga0209201_10143754	3300025708	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLP
Ga0208458_11347991	3300025714	Anaerobic Digestor Sludge	MTPTLSRQFFDTFPPDVARAILEGRPLRIHAAKVSVVREAGTTGFAIDTLPAAGRPAEWERTTQKIGRIL
Ga0209606_11037721	3300025730	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLP
Ga0208459_10971932	3300025748	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPDVARAILEGRPLRIHAAKVSVVRE
Ga0208939_11368601	3300025772	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFAIDTLPRDGRPKE
Ga0209096_10687212	3300025859	Anaerobic Digestor Sludge	MTPTLSRQFYETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDTLP
Ga0209605_11527782	3300025861	Anaerobic Digestor Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFAIDTLP
Ga0208460_100484381	3300025877	Anaerobic Digestor Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREA
Ga0209509_10205191	3300026194	Anaerobic Biogas Reactor	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDK
Ga0209612_10222391	3300026250	Anaerobic Biogas Reactor	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAIDTLPV
Ga0209612_11046482	3300026250	Anaerobic Biogas Reactor	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKT
Ga0209722_10111057	3300026252	Anaerobic Biogas Reactor	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVRDKTGAAFAIDT
Ga0209723_10491693	3300026311	Anaerobic Biogas Reactor	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAIDTLPAAGRPAEWEKTTQRICRILK
Ga0209537_10334992	3300027510	Biogas Fermentantion	MTSVASQQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAAFAIDTLP
Ga0209537_10375161	3300027510	Biogas Fermentantion	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSV
(restricted) Ga0255342_10899962	3300028567	Wastewater	MTSAASQQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFAIDT
(restricted) Ga0255345_12027072	3300028568	Wastewater	MTPTLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVREAGTTGFAIDTLPRDGRPKEWERTTQKICK
(restricted) Ga0255341_11835881	3300028570	Wastewater	MTPTLSRQFFETFPPDVARAILEGDRLRVHAAKVSVVRDKTGAAFAID
(restricted) Ga0255341_13095192	3300028570	Wastewater	MTPTLSRQFFETFPPDVARAILEGRPLRIHAAKVSVVREAGTTGFAIDTLPRDGRPKEWERT
Ga0265294_101178142	3300028602	Groundwater	MTSPLSRQFFETFPPEVARAILEGRPLRIHAAKVSVVRDK
Ga0265294_106976422	3300028602	Groundwater	MTSAASQQFFETFPPEVARAILEGRPLRIHAAKVSVVRDKTGAA
Ga0302246_10139123	3300028624	Activated Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAIDTLPRDGRPAEWEKTTQRIC
Ga0302244_10188922	3300028626	Activated Sludge	MTPSLSRQFFETFPPEVARGFLEGDRLRIHAAKVSLVREAGTTGFAIDTLP
Ga0302243_10142293	3300028627	Activated Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSV
Ga0302243_10224652	3300028627	Activated Sludge	MTSAASRQFFETFPPDVARGFLAGDRLRIHAAKVSVVREAGTTGFAIDTLPRDGRPKEWE
Ga0302243_10521523	3300028627	Activated Sludge	MTPTLSRQFFETFPPDVARGFLAGDRLRIHAAKVSVVREAGTTG
Ga0302249_10606942	3300028628	Activated Sludge	MTPTLSRQFFETFPPDVARGFLAGDRLRIHAAKVSVVREAGTTGFAIDTLSVAGRPAEWE
Ga0302236_10333062	3300028633	Activated Sludge	MTPTLSRQFFETFPPEVARGILEGDRLRVHAAKVSVVREAGTTGFAIDTLPRDGRPKEWERTTQK
Ga0302242_10219881	3300028634	Activated Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAIDTLPRDGRPAEWERTTQKICKIL
Ga0302239_10502181	3300028641	Activated Sludge	MTSAASQQFFETFPPEVARAILEGDRLRIHAAKVSVVREAGTTGFAIDTLPRDGRPAEWEKTT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters