Scaffold ConS_8084CDRAFT_1010398

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold ConS_8084CDRAFT_1010398

Scaffold ConS_8084CDRAFT_1010398

Overview

Basic Information
Taxon OID	3300000397 Open in IMG/M
Scaffold ID	ConS_8084CDRAFT_1010398 Open in IMG/M
Source Dataset Name	Hot spring microbial streamer communities from Conch Spring, Yellowstone National Park, USA - C T=80-84
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	DOE Joint Genome Institute (JGI)
Sequencing Status	Draft

Scaffold Components
Scaffold Length (bps)	724
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (66.67%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	1 (100.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico

Source Dataset Sampling Location
Location Name	Conch Spring, Yellowstone National Park, Wyoming, USA
Coordinates	Lat. (^o)	44.5564135	Long. (^o)	-110.8321631	Alt. (m)		Depth (m)	2194.56
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F013155	Metagenome / Metatranscriptome	274	Y

Sequences

Protein ID	Family	RBS	Sequence
ConS_8084CDRAFT_10103982	F013155	GAG	MELYQVIVVAIALVNLAVTVWLLRLLYPVWQTLRKVVFAMEHYDFDRLVNQFLNGEKPLAENVVIKTIDKKEEGYREISIIRTYKRPLDPREVQENFVRQMAEKLQ*

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