Basic Information | |
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Taxon OID | 3300002138 Open in IMG/M |
Scaffold ID | M3t6FKB1_1396566 Open in IMG/M |
Source Dataset Name | M3t6FKB1 (102f) |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 38629 |
Total Scaffold Genes | 56 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 41 (73.21%) |
Novel Protein Genes | 6 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 4 (66.67%) |
Associated Families | 6 |
Taxonomy | |
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All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds |
Source Dataset Sampling Location | ||||||||
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Location Name | Baltic Sea | |||||||
Coordinates | Lat. (o) | 65.3915 | Long. (o) | 23.49916667 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F000934 | Metagenome / Metatranscriptome | 828 | Y |
F001991 | Metagenome / Metatranscriptome | 607 | Y |
F002085 | Metagenome / Metatranscriptome | 595 | Y |
F012668 | Metagenome / Metatranscriptome | 278 | Y |
F027177 | Metagenome | 195 | Y |
F037639 | Metagenome / Metatranscriptome | 167 | Y |
Protein ID | Family | RBS | Sequence |
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M3t6FKB1_139656617 | F000934 | GAG | MSLNQILAIAESVGINDQRFIGQVLSRNQRINTSEQLTVVPFAFTMKPMNYLRYSESRSLLSSLRVPDKALEQYLNFSTTGWSNYIEYQGDMTSGQISACAWQTSSANNNLVLGSLPSISSSAYIVKIGDFCQVGRYAYIATANVQRGGGSTVNIPVHRSLLTPLVSPVSAVIGEFGTTVSLGGSSYIGTTFCVILRSYPTYTLIPIQNDSFIQWSGDFVAFEAVL* |
M3t6FKB1_139656618 | F002085 | AGGCGG | MNVIAPVDGTNNIRYADFVRVTTGDAVYRFATTPKALTIPAVDALPFDAVGQLMKVGSAQRDIKSTANETTFTLVGIDTAMLGWVLGQNVKGAKIEAWHGFFDTDEVLITDGGTGGLYQFFNGFINSFSINEEWMEELRTYVGIITVSASSIQLILQNRTAGRYTNDNSWQFFNNGDTSMNRVPFISTINYYFGKTQ* |
M3t6FKB1_139656622 | F001991 | GGAG | MAIFSKNTLTQISGFDNPIIAGELVWEQQTYWNLTFKNASTGDAYDLTGATLDAQILRRNLSNIRDTRYGLTFDIADFDPEPDPVNLTITNVVEENGAFTLVINDADWEVLSSSVQLDINAENCVGFSGRIKISMPEQGTTPAQDLIIFLLFLMRSDGVTN* |
M3t6FKB1_139656624 | F037639 | N/A | MLPRYQGIDTSFLVATLTAAIQEQQAIITALTTRITALEAK* |
M3t6FKB1_139656631 | F027177 | GAGG | MKFLNWFKKLYIPATCEELMAQELDTARRDLLLAETARDYAESMVLYNNQRIERLTAALQERLA* |
M3t6FKB1_13965669 | F012668 | N/A | MAITRYENVDINNVTNGVNSVGEYTTTITEWFTSRALVADVSNSLRISERYRVYQDLVNLTFNYTPNIKSIVDNQNLYSITWRGFDWRITDIRESNDRMKVTLLCYRNDPTTPV* |
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