Basic Information | |
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Taxon OID | 3300005963 Open in IMG/M |
Scaffold ID | Ga0081519_100074 Open in IMG/M |
Source Dataset Name | Hot spring microbial streamer communities from Conch Spring, Yellowstone National Park, USA - C T=80-84 |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | DOE Joint Genome Institute (JGI) |
Sequencing Status | Draft |
Scaffold Components | |
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Scaffold Length (bps) | 19734 |
Total Scaffold Genes | 34 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 19 (55.88%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 0 (0.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Saline, Thermophilic Phototrophic And Chemotrophic Mat Microbial Communities From Various Locations In Usa And Mexico |
Source Dataset Sampling Location | ||||||||
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Location Name | Conch Spring, Yellowstone National Park, Wyoming, USA | |||||||
Coordinates | Lat. (o) | 44.5564135 | Long. (o) | -110.8321631 | Alt. (m) | Depth (m) | 2194.56 | Location on Map |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F038745 | Metagenome / Metatranscriptome | 165 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0081519_10007434 | F038745 | N/A | MDKAVMSICGELMQASLTFSAYYPLCLNSPSCAYAEAVERLIRRAASARDAEELIKVMDGRIKLEELGLPAPALKTLAEELGPEPRWLDALAASFFRLYLGIHRQRRLDGRDLALALCLWAQRRRREDPWNPLWRVIMLKPEKLYTAEEAREALAINEVLFRRLWRRALANEHAYGFQLILAALSLMAIPTRSV* |
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