Scaffold Ga0115910_159371

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0115910_159371

Scaffold Ga0115910_159371

Overview

Basic Information
Taxon OID	3300008885 Open in IMG/M
Scaffold ID	Ga0115910_159371 Open in IMG/M
Source Dataset Name	Microbial communities associated with green microalga Chlorella saccharophila, Germany - (MZCH: 10155)
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	HPI Heinrich-Pette-Institut
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	697
Total Scaffold Genes	2 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	1 (50.00%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Microbial → Bacteria → Unclassified → Unclassified → Chlorella Sacherophilia (Mzch 10155) Associated → Microbial Communities Associated With Green Microalga Chlorella Saccharophila, Germany - (Mzch: 10155)

Source Dataset Sampling Location
Location Name	Germany
Coordinates	Lat. (^o)	53.560155	Long. (^o)	9.859606	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F029122	Metagenome / Metatranscriptome	189	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0115910_1593711	F029122	N/A	MLIRPAISDTDPIRHRRPTPDGQFSGNIIDEAMRPFARRG

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