Scaffold Ga0133780_1004569

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0133780_1004569

Scaffold Ga0133780_1004569

Overview

Basic Information
Taxon OID	3300009967 Open in IMG/M
Scaffold ID	Ga0133780_1004569 Open in IMG/M
Source Dataset Name	Termite gut microbial communities -laboratory nest Belgium. Combined Assembly of Gp0151224, Gp0151225, Gp0151226, Gp0151227
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Luxembourg Institute of Science and Technology
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	2455
Total Scaffold Genes	6 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (33.33%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Eukaryota → Opisthokonta	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Insecta → Digestive System → Unclassified → Unclassified → Termite Gut → Multi-Omic Termite Study

Source Dataset Sampling Location
Location Name	Belgium
Coordinates	Lat. (^o)	50.814939	Long. (^o)	4.383499	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F069311	Metagenome	124	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0133780_10045691	F069311	N/A	MLVITVQTTIPVKEIDDRITAAVFFVASVLWDLKFHFGSVFKIMNLE*

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