NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Scaffold Ga0136159_1071848

Scaffold Ga0136159_1071848


Overview

Basic Information
Taxon OID3300010217 Open in IMG/M
Scaffold IDGa0136159_1071848 Open in IMG/M
Source Dataset NameSitobion avenae (English Grain Aphid) hemolymph microbial communities from Henan Dengzhou, China ? Region2
Source Dataset CategoryMetagenome
Source Dataset Use PolicyOpen
Sequencing CenterDNAVision
Sequencing StatusPermanent Draft

Scaffold Components
Scaffold Length (bps)779
Total Scaffold Genes1 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)1 (100.00%)
Novel Protein Genes1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)1 (100.00%)
Associated Families1

Taxonomy
Not Available(Source: )

Ecosystem & Geography

Source Dataset Ecosystem
Host-Associated → Endosymbionts → Bacteria → Unclassified → Unclassified → Wheat → Sitobion Avenae (English Grain Aphid) Hemolymph Microbial Communities From Henan Dengzhou, China - Region2

Source Dataset Sampling Location
Location NameHenan Dengzhou, China
CoordinatesLat. (o)32.68Long. (o)112.08Alt. (m)Depth (m)
Location on Map
Zoom:    Powered by OpenStreetMap ©

Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F029983Metagenome186Y

Sequences

Protein IDFamilyRBSSequence
Ga0136159_10718481F029983GAGVSLCCIEVYKWVAVMVGVKFEFNDIIPLHKKKRFW
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