Scaffold Ga0153698

Basic Information
Taxon OID	3300011335 Open in IMG/M
Scaffold ID	Ga0153698_1026 Open in IMG/M
Source Dataset Name	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	Chunlab, Inc
Sequencing Status	Finished

Scaffold Components
Scaffold Length (bps)	60109
Total Scaffold Genes	96 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	19 (19.79%)
Novel Protein Genes	23 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	5 (21.74%)
Associated Families	13

Taxonomy
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	(Source: UniRef50)

Source Dataset Ecosystem
Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater → Lotic Viral Community From Han River, Hwacheon, Gangwon-Do, South Korea

Source Dataset Sampling Location
Location Name	Hwacheon, Gangwon-do, South Korea
Coordinates	Lat. (^o)	38.0874861	Long. (^o)	127.761456	Alt. (m)	Depth (m)
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001808	Metagenome / Metatranscriptome	631	Y
F001883	Metagenome / Metatranscriptome	622	Y
F003299	Metagenome / Metatranscriptome	495	N
F003327	Metagenome / Metatranscriptome	494	Y
F004234	Metagenome / Metatranscriptome	447	Y
F004451	Metagenome / Metatranscriptome	437	N
F006111	Metagenome / Metatranscriptome	381	N
F008079	Metagenome / Metatranscriptome	339	Y
F012974	Metagenome / Metatranscriptome	275	N
F015420	Metagenome / Metatranscriptome	255	Y
F018483	Metagenome / Metatranscriptome	235	N
F019928	Metagenome / Metatranscriptome	227	Y
F104392	Metagenome	100	Y

Sequences

Protein ID	Family	RBS	Sequence
Ga0153698_102610	F008079	N/A	MKIKDEYIGAKISHKGNRITLDANRFDYFASIGLGYMFEEPTVSEPKVVKYKAVKGPIPEPEVTEEDGTETE*
Ga0153698_102611	F004451	AGGA	MRPILDNYISAHYKEIRKYTNYFLVRMKSTISADAVINNSFLYLCNIDIEVTDVGKVKAYLLNTIKMQILWSTSLTNRQERVTATDITMPIAIDDDTDLYDKIREDMQYQHNMAVIETYRGRITDRIKLIVFQTYFDKGYSTARAMAEYFKIPVTSAHYWIQEIKNDLKNLRDEN*
Ga0153698_102627	F003299	N/A	MYKVVFKTFDYWNGPIKLVTRIVEAYDADHVKQLIQKNDDLIMLIEEI*
Ga0153698_102628	F003327	GAG	MINEFTQLAREVQDAIANGDYTHQKYLRFREWYFQNYEGSKRNANRDFKMFDLMYGLDLPIKNDSNEDV*
Ga0153698_10263	F104392	N/A	MATTIIAQPQVLMPAYNPIKYIIDNTDKNEPGFRYIFTIYPATGSHIPANVVAQYKTLPVYGTGYGEQDVSKLMQSKVGFDTSAFGLDSAQATNSWYQYDIDLGYEYIDNINYGTSLANNGGNVQISFTAHGFVQGDQISITQDDLGVANPGVEGLHTVLSATANNFTINALYADVTDVTINGTVTYADLRKTIVLDDEAIVDREVFNGAYNNNINISDNTPFPYNDFYGVSADGNLLTSLVYSVPPSTFLGAMFYLNLRAYQDIYTVAYYDMSNNFIDDYLVNVPADGIHTFSVGPTALVTEDYYVQISNSLGFISEDYLFTYDNRCTINDDQLIYLDRMGSWQSFAFQLKTYEKGQVTREQYNQHIDGQVVSGEWVGVPLQKGFRTYNTNVTKTFDLNTNWMNENDGKRFQELLTSPQVYYYTDSYYCACVVEATNFEVFRQRNKNLIKQSVTIRLAQQDPING*
Ga0153698_102630	F004234	N/A	MNFIDLYKRDNTYFSNWTTDYDSTIYIAGTIEPFTYHAEETDDEEVSLFPLSYANLNLLKSKL*
Ga0153698_102634	F001808	N/A	MRYLAIIILLSSCSAQYHLNKAIKKGYTCEETGDTIRITTLDSIPVIIHDSIVWEKFITTKDTIIKYRTTYVPRTRFQERLAYKLKVKTIYKDRIVEKAQAKATRPRTRGNLNLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0153698_102637	F019928	N/A	MKHSGVLSIIVFSLGYLTGISLLFEPALYLKLMGGSIIGYLSFILALQQERREDEEGEEYE*
Ga0153698_102646	F001883	N/A	MAYKNTGEFNVKYPTRRRMANILKRILRNDIVQNNGTLVESIRINAKVTGFGSLEIEIVAMYYFIFLNNGAFLWNGGVITPRDYVNTFTRELAAAGITNEIYSQYVEWISQNYPILEVADILESDQRLTYTFYALDPPAGFTPNSPLTV*
Ga0153698_102647	F006111	N/A	MISYQSIVDKITTFYDNHLQVKKVGSDFKEQMVNFATADEKYPLVYVVPTGVTPYENVSIFTLELYCFDIIQMDRANITTILSDTQQILQDLYLEFTFSDDYDFDIDGQPTFIPLNNDLLDYAAGWQMNISVVIKSWTNCQIPEQNS*
Ga0153698_102650	F104392	N/A	MATTIIAQPQQLMPAYNPIKYIIDNTNKNEPGFRYIFSIYPAAGSHTSATLIAQYRVLPVFSTGYGEQDISRLMQSLVTYNETGIDGGVAYNVSESWYQYDVDLGYEFIDNIDYFTTLQDNGGNVRISFTAHGFVAGDQVVIAQTGTGPTYNPALEGLHTVLSATANQFTVNVLWSTIGESTANGNVTYADLRKTQVLDDEVIEDQEVFNGAYNYNINISDMNAFPSAAYLGLANPYGYLMTSNLPTDGPPYAPSAFPNAVFFYNLRVYGAYNYEVEWYDMDGNLLDNTSFNPASDGIYSIFVGPTSNVTVDYYVSIYSDGGTANDFYYFKYDDRCTINTDQLIYLDRMGSWQSFAFQLRTYEKGQITREQYNQHIDGQVVSTEWVGKQLQKGFRTYNTNVTKTFDLNTNWMSQYDADRFQELLTSPQVYYYSNTYFCACVVDSNTFEVFSQKNKKLIKQSVTIRLAQQDPING*
Ga0153698_102653	F018483	AGGA	MCLAVEAYIYSKKGVAIKINRIAIISDSRQMEMLAYAYAYANGDR*
Ga0153698_102656	F004451	AGGA	MRPILDNYISAHYKEIRKYTNYFLVRMKSTISADAVINNSFLYLCNIDIEVTDVGKVKSYLLNTIKMQILWSTSLTNRQERVTATDSTMPILMDDDTDLWDKIREDMQYQDNMAVIDIYRGRITDRIKLIVFQTYFDKGYSTARAMAEYFKIPVTSAHYWIQEIKNDLKQLRDEN*
Ga0153698_102657	F012974	N/A	MFTEAEQVIIQQVFSLPEKEQSYKIHLLKLKAIKVRLTGTADKECFCGSVRRKIWLKDFKQWYETYT*
Ga0153698_102676	F003299	N/A	MKRYKVVFKTFDYWNGPIKLVTRIVEAYDADHVKQLIQKNDDLILLIEEV*
Ga0153698_102677	F003327	N/A	MTEFTHLAIIVQNEIANGDYTHQKYLQFREWYFQNYDGSKRNANRDFKMFDLMYGLDVPIKNNDNEEI*
Ga0153698_102678	F004234	N/A	MNFIDLHKRDNTYFSNWTTDYDSDVYIAGTIEPFTYNATETDGEYISLFPLSNSELNLLKSKL*
Ga0153698_102679	F015420	N/A	MKRLINYFTPVGAEEKAFAIAMLIVTSVTLSILFLFTFLELIL*
Ga0153698_10268	F018483	AGGA	MCQAVEAYIYSKKGVAIKINRLAIISDARQMEMLAYAYAYANGDR*
Ga0153698_102682	F001808	N/A	MRYLAIILMLSSCSAQYHLNKAIKKGYTCEETGDTIRITTLDSIPVIIHDSIVWEKFITTKDTIIKYKSVYVPKTKIELKREYKLKIKTIYKDRIVEKAQAKATQPRPRGNLSLLFVGVGIGLLLSYLFKFAREKYLF*
Ga0153698_102685	F019928	N/A	MKHSGVLSIIVFSLGYLTGISLLFEPALYLKLMGGSLIGYLTFILALQMEGQE*
Ga0153698_102694	F001883	N/A	MAYKNTGEFNVKYPTRRRMANILKRILRNDIVENNGTLVESIRINAKVTGFGSLEIEIVAMYYFIFLNNGAFLWNGGVITPRDYVNTFTRELASAGITNEIYSQYVEWISQNYPILEVADILESDQRLTYTFYALDPPAGFTPNYPLTV*
Ga0153698_102695	F006111	N/A	MISYQSIVDKITTFYDNHLQVKKVGSDFKEQMVNFATKDEKYPLVYVVPTGVTPYENVTIFNIELYCFDIIQMDRANITTILSDTQQILQDLYLEFTFSDDYDFDIDGQPTFIPLNNDLLDYAAGWQMNLSVVIKSWTNCQIPEQNA*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Scaffold Ga0153698_1026

Overview

Ecosystem & Geography

Associated Families

Sequences