Scaffold Ga0167340_1149171

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

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Scaffold Ga0167340_1149171

Scaffold Ga0167340_1149171

Overview

Basic Information
Taxon OID	3300014831 Open in IMG/M
Scaffold ID	Ga0167340_1149171 Open in IMG/M
Source Dataset Name	Raw sludge microbial communities from sewage treatment plant in Sweden - SWESTP63 - Kappala-primary 226
Source Dataset Category	Metagenome
Source Dataset Use Policy	Open
Sequencing Center	University of Gothenburg
Sequencing Status	Permanent Draft

Scaffold Components
Scaffold Length (bps)	649
Total Scaffold Genes	3 (view)
Total Scaffold Genes with Ribosome Binding Sites (RBS)	2 (66.67%)
Novel Protein Genes	1 (view)
Novel Protein Genes with Ribosome Binding Sites (RBS)	0 (0.00%)
Associated Families	1

Taxonomy
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	(Source: UniRef50)

Ecosystem & Geography

Source Dataset Ecosystem
Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Raw Primary Sludge → Sewage Microbial Communities From Wastewater Treatment Plant In Sweden

Source Dataset Sampling Location
Location Name	Sweden
Coordinates	Lat. (^o)	59.355554	Long. (^o)	18.227079	Alt. (m)		Depth (m)
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F074867	Metagenome / Metatranscriptome	119	N

Sequences

Protein ID	Family	RBS	Sequence
Ga0167340_11491711	F074867	N/A	GITDIILNGEAFELHPTFSNLDKLETVLNKGAIGFLRQDLSSGAFKAGDVVSIIQVCAVPANGRKFPSWWTRDGVGEAVIGAGLVNVTTSVTHFLAKALTAGTETDIKTVGSESDEKK*

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