Basic Information | |
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Taxon OID | 3300014966 Open in IMG/M |
Scaffold ID | Ga0182824_10013549 Open in IMG/M |
Source Dataset Name | Freshwater microbial mat microbial communities from Canadian High Arctic Lake, Ward Hunt Island, Canada - Sample WHa |
Source Dataset Category | Metagenome |
Source Dataset Use Policy | Open |
Sequencing Center | Laval University |
Sequencing Status | Permanent Draft |
Scaffold Components | |
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Scaffold Length (bps) | 1393 |
Total Scaffold Genes | 4 (view) |
Total Scaffold Genes with Ribosome Binding Sites (RBS) | 1 (25.00%) |
Novel Protein Genes | 1 (view) |
Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
Associated Families | 1 |
Taxonomy | |
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All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6 | (Source: UniRef50) |
Source Dataset Ecosystem |
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Environmental → Aquatic → Freshwater → Lake → Unclassified → Microbial Mat → Microbial Mat Communities From High Arctic Lakes |
Source Dataset Sampling Location | ||||||||
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Location Name | Canada: Ward Hunt Island | |||||||
Coordinates | Lat. (o) | 83.079722 | Long. (o) | -74.138056 | Alt. (m) | Depth (m) | Location on Map | |
Zoom: | Powered by OpenStreetMap © |
Family | Category | Number of Sequences | 3D Structure? |
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F008147 | Metagenome / Metatranscriptome | 338 | Y |
Protein ID | Family | RBS | Sequence |
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Ga0182824_100135492 | F008147 | AGTAGG | MSIEEAILDTVRRLPPTQQEQVLRFADGLQREPKITMVPSRDRRREIKWIKDNRTAYADQWVVVEGDRLIAANADGHKAFADAKEAGIDVPFLVHVLQEDSLPFVAGW* |
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